| Clone Name | rbags27m09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CHD6_HUMAN (Q8TD26) Chromodomain-helicase-DNA-binding protein 6 ... | 30 | 3.2 | 2 | BGAL_ARTSB (Q59140) Beta-galactosidase (EC 3.2.1.23) (Lactase) | 29 | 7.1 |
|---|
>CHD6_HUMAN (Q8TD26) Chromodomain-helicase-DNA-binding protein 6 (EC 3.6.1.-)| (ATP-dependent helicase CHD6) (CHD-6) (Radiation-induced gene B protein) Length = 2715 Score = 30.4 bits (67), Expect = 3.2 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = -3 Query: 522 GGL*SFQFDSGFPICGILRPGILHPVSPVSISIGIPRDD 406 G + S Q G + GIL+ G++HPV+ ++ + RDD Sbjct: 2243 GAISSLQGALGMDLSGILQAGLIHPVTGQIVNGSLRRDD 2281
>BGAL_ARTSB (Q59140) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1015 Score = 29.3 bits (64), Expect = 7.1 Identities = 17/52 (32%), Positives = 22/52 (42%) Frame = +2 Query: 71 RMYSTMPLQPQQGRTNQHAPITESTTTNG*PLHGCSRISQPNQHVHPFLFVE 226 RMYS++P GR + HA L GC+ I Q PF+ E Sbjct: 473 RMYSSIPETDSIGRNDSHA-----------LLLGCNAIESARQRTRPFILCE 513 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,316,073 Number of Sequences: 219361 Number of extensions: 1622329 Number of successful extensions: 3595 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 3516 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3594 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)