| Clone Name | rbags27m08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF123608.1|AF123608 Triticum aestivum clone CYP73-TA cytochrome P450 mRNA, complete cds Length = 1506 Score = 682 bits (344), Expect = 0.0 Identities = 386/400 (96%) Strand = Plus / Minus Query: 178 aagcctcgagtggcttgcagacgatggtggcgtgcttgaggatctggttgctgaactgcc 237 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 1504 aagcctcgagtggcttgcagacaatggtggcgtgcttgaggatctggttggtaaactgcc 1445 Query: 238 ctggcttctcggtggtgtcgatcttgtcctgccccggcggcggcagcagctcgaagttct 297 | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1444 cgggcttctcggtggtgtcgatcttgtcctgccccggcggcggcagcagctggaagttct 1385 Query: 298 gcaccaggcgtccgagcgtgatgccgatgatgggcagcgcgaggatgatcccggggcagc 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1384 gcaccaggcgtccgagcgtgatgccgatgatgggcagcgcgaggatgatcccggggcagc 1325 Query: 358 tccggcggccgacgccgaagggcacgaaccggaagtcgttgccgtgggcctcgacggact 417 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct: 1324 tccggcggccgacgccgaagggcacgaaccggaaatcgttgccgtgggcctcgacggcct 1265 Query: 418 tctcctcctcgaggaagcgctcgggcctgaactcgtcggcgcgcacccaccgcttggggt 477 |||||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 1264 tctcctcctcgaggaacctctccggcctgaactcatcggcgcgcacccaccgcttggggt 1205 Query: 478 cgttggcgaggaaccaggcgttgacgaggatcttggattcggcggggatgtcgtaaccgg 537 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1204 cgttggcgaggaaccaggcgttgacgaggatcttggactcggcggggatgtcgtagccgg 1145 Query: 538 cgagcttggcatcgctgaggttcatgtgcggcaccaggag 577 |||||||||| ||||||||||||||||||||||||||||| Sbjct: 1144 cgagcttggcgtcgctgaggttcatgtgcggcaccaggag 1105
>gb|AY034143.1| Sorghum bicolor cinnamic acid 4-hydroxylase (C4H) mRNA, complete cds Length = 1762 Score = 537 bits (271), Expect = e-149 Identities = 364/395 (92%) Strand = Plus / Minus Query: 180 gcctcgagtggcttgcagacgatggtggcgtgcttgaggatctggttgctgaactgccct 239 |||||||| |||||||||||||| ||||| ||||| |||||||||||||||||| || Sbjct: 1568 gcctcgaggggcttgcagacgattgtggcatgcttagcgatctggttgctgaactggccg 1509 Query: 240 ggcttctcggtggtgtcgatcttgtcctgccccggcggcggcagcagctcgaagttctgc 299 |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1508 ggcttctccgtggtgtcgatcttgtcctgccccggcggcggcagcagctggaagttctgc 1449 Query: 300 accaggcgtccgagcgtgatgccgatgatgggcagcgcgaggatgatcccggggcagctc 359 ||||| | || || |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1448 accagcctgcccagggtgatgccgatgataggcagcgcgaggatgatcccggggcagctc 1389 Query: 360 cggcggccgacgccgaagggcacgaaccggaagtcgttgccgtgggcctcgacggacttc 419 |||||||||||||||||||||||||| ||||||||||||||||| ||||| |||| |||| Sbjct: 1388 cggcggccgacgccgaagggcacgaagcggaagtcgttgccgtgtgcctccacggtcttc 1329 Query: 420 tcctcctcgaggaagcgctcgggcctgaactcgtcggcgcgcacccaccgcttggggtcg 479 |||||||| |||||||||||||||| ||||||||||| |||||||||| |||||||||| Sbjct: 1328 tcctcctccaggaagcgctcgggccggaactcgtcgggccgcacccacctcttggggtcg 1269 Query: 480 ttggcgaggaaccaggcgttgacgaggatcttggattcggcggggatgtcgtaaccggcg 539 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 1268 ttggcgaggaaccaggcgttgacgaggatcttggactcggcggggatgtcgtagccggcg 1209 Query: 540 agcttggcatcgctgaggttcatgtgcggcaccag 574 |||||| | ||| ||||||||||||| |||||||| Sbjct: 1208 agcttgccgtcgttgaggttcatgtggggcaccag 1174
>gb|AY104175.1| Zea mays PCO098406 mRNA sequence Length = 1755 Score = 515 bits (260), Expect = e-143 Identities = 363/396 (91%), Gaps = 1/396 (0%) Strand = Plus / Minus Query: 180 gcctcgagtggcttgcagacgatggtggcgtgcttgaggatctggttgctgaactgccct 239 |||||||| |||||||| ||||||||||| |||||| |||||||||||||||||| || Sbjct: 1566 gcctcgaggggcttgcaaacgatggtggcatgcttggcgatctggttgctgaactggccg 1507 Query: 240 ggcttctcggtggtgtcgatcttgtcctgccccggcggcggcagcagctcgaagttctgc 299 |||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1506 ggcttctccgtggtgtcgatcttgtccagccccggcggcggcagcagctggaagttctgc 1447 Query: 300 accaggcgtccgagcgtgatgccgatgatgggcagcgcgaggatgatcccggggcagctc 359 ||||| || || || |||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 1446 accagccggcccagggtgatgccgatgataggcagcgcgaggatgatcccagggcagctc 1387 Query: 360 cggcggccgacgccgaagggcacgaaccggaagtcgttgccgtgggcctcgacggacttc 419 ||||||||||| || ||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1386 cggcggccgaccccaaagggcacgaatcggaagtcgttgccgtgggcctccacggacttc 1327 Query: 420 tcctcct-cgaggaagcgctcgggcctgaactcgtcggcgcgcacccaccgcttggggtc 478 ||||||| | |||||||||||||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 1326 tcctcctccaaggaagcgctcgggccggaactcgtcggggcgcacccacctcttggggtc 1267 Query: 479 gttggcgaggaaccaggcgttgacgaggatcttggattcggcggggatgtcgtaaccggc 538 |||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 1266 gttggcgaggaaccaggcattgacgaggatcttggactcggcggggatgtcgaaaccggc 1207 Query: 539 gagcttggcatcgctgaggttcatgtgcggcaccag 574 ||||||| | ||| ||||||||||||| || ||||| Sbjct: 1206 gagcttgccgtcgttgaggttcatgtgggggaccag 1171
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22, complete sequence Length = 166052 Score = 496 bits (250), Expect = e-137 Identities = 352/386 (91%) Strand = Plus / Plus Query: 189 ggcttgcagacgatggtggcgtgcttgaggatctggttgctgaactgccctggcttctcg 248 ||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 102219 ggcttgcagacgacggtggcgtgcttgaggatctggttgctgaactggccgggcttctcg 102278 Query: 249 gtggtgtcgatcttgtcctgccccggcggcggcagcagctcgaagttctgcaccaggcgt 308 |||||||| | ||||||| ||| |||||||||||||| |||||| |||| || ||||| Sbjct: 102279 gtggtgtccaccttgtccatcccgggcggcggcagcaggtcgaagctctggacgaggcgg 102338 Query: 309 ccgagcgtgatgccgatgatgggcagcgcgaggatgatcccggggcagctccggcggccg 368 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 102339 ccgagcgtgatcccgatgatgggcagcgcgaggatgatcccggggcagctgcggcggccg 102398 Query: 369 acgccgaagggcacgaaccggaagtcgttgccgtgggcctcgacggacttctcctcctcg 428 ||||||||||||||||| ||||||||||||||||| ||||| |||| |||||||||||| Sbjct: 102399 acgccgaagggcacgaagcggaagtcgttgccgtgcgcctccacggccttctcctcctcc 102458 Query: 429 aggaagcgctcgggcctgaactcgtcggcgcgcacccaccgcttggggtcgttggcgagg 488 ||||| | ||| ||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 102459 aggaacctctccggcctaaactcgtcggggcgcacccaccgcttggggtcgttggcgagg 102518 Query: 489 aaccaggcgttgacgaggatcttggattcggcggggatgtcgtaaccggcgagcttggca 548 ||||| ||||| || ||||||||||| ||||||||||||||||| |||||||||||| | Sbjct: 102519 aaccacgcgttcaccaggatcttggactcggcggggatgtcgtagccggcgagcttgccg 102578 Query: 549 tcgctgaggttcatgtgcggcaccag 574 ||| ||||||||||||||||||||| Sbjct: 102579 tcggcgaggttcatgtgcggcaccag 102604
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 496 bits (250), Expect = e-137 Identities = 352/386 (91%) Strand = Plus / Plus Query: 189 ggcttgcagacgatggtggcgtgcttgaggatctggttgctgaactgccctggcttctcg 248 ||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 14766805 ggcttgcagacgacggtggcgtgcttgaggatctggttgctgaactggccgggcttctcg 14766864 Query: 249 gtggtgtcgatcttgtcctgccccggcggcggcagcagctcgaagttctgcaccaggcgt 308 |||||||| | ||||||| ||| |||||||||||||| |||||| |||| || ||||| Sbjct: 14766865 gtggtgtccaccttgtccatcccgggcggcggcagcaggtcgaagctctggacgaggcgg 14766924 Query: 309 ccgagcgtgatgccgatgatgggcagcgcgaggatgatcccggggcagctccggcggccg 368 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 14766925 ccgagcgtgatcccgatgatgggcagcgcgaggatgatcccggggcagctgcggcggccg 14766984 Query: 369 acgccgaagggcacgaaccggaagtcgttgccgtgggcctcgacggacttctcctcctcg 428 ||||||||||||||||| ||||||||||||||||| ||||| |||| |||||||||||| Sbjct: 14766985 acgccgaagggcacgaagcggaagtcgttgccgtgcgcctccacggccttctcctcctcc 14767044 Query: 429 aggaagcgctcgggcctgaactcgtcggcgcgcacccaccgcttggggtcgttggcgagg 488 ||||| | ||| ||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 14767045 aggaacctctccggcctaaactcgtcggggcgcacccaccgcttggggtcgttggcgagg 14767104 Query: 489 aaccaggcgttgacgaggatcttggattcggcggggatgtcgtaaccggcgagcttggca 548 ||||| ||||| || ||||||||||| ||||||||||||||||| |||||||||||| | Sbjct: 14767105 aaccacgcgttcaccaggatcttggactcggcggggatgtcgtagccggcgagcttgccg 14767164 Query: 549 tcgctgaggttcatgtgcggcaccag 574 ||| ||||||||||||||||||||| Sbjct: 14767165 tcggcgaggttcatgtgcggcaccag 14767190 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 365 gccgacgccgaagggcacgaaccggaagtcg 395 |||| ||||||| |||||||||||||||||| Sbjct: 25344429 gccggcgccgaacggcacgaaccggaagtcg 25344399
>dbj|AK104994.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-H11, full insert sequence Length = 1796 Score = 496 bits (250), Expect = e-137 Identities = 352/386 (91%) Strand = Plus / Minus Query: 189 ggcttgcagacgatggtggcgtgcttgaggatctggttgctgaactgccctggcttctcg 248 ||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 1569 ggcttgcagacgacggtggcgtgcttgaggatctggttgctgaactggccgggcttctcg 1510 Query: 249 gtggtgtcgatcttgtcctgccccggcggcggcagcagctcgaagttctgcaccaggcgt 308 |||||||| | ||||||| ||| |||||||||||||| |||||| |||| || ||||| Sbjct: 1509 gtggtgtccaccttgtccatcccgggcggcggcagcaggtcgaagctctggacgaggcgg 1450 Query: 309 ccgagcgtgatgccgatgatgggcagcgcgaggatgatcccggggcagctccggcggccg 368 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1449 ccgagcgtgatcccgatgatgggcagcgcgaggatgatcccggggcagctgcggcggccg 1390 Query: 369 acgccgaagggcacgaaccggaagtcgttgccgtgggcctcgacggacttctcctcctcg 428 ||||||||||||||||| ||||||||||||||||| ||||| |||| |||||||||||| Sbjct: 1389 acgccgaagggcacgaagcggaagtcgttgccgtgcgcctccacggccttctcctcctcc 1330 Query: 429 aggaagcgctcgggcctgaactcgtcggcgcgcacccaccgcttggggtcgttggcgagg 488 ||||| | ||| ||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1329 aggaacctctccggcctaaactcgtcggggcgcacccaccgcttggggtcgttggcgagg 1270 Query: 489 aaccaggcgttgacgaggatcttggattcggcggggatgtcgtaaccggcgagcttggca 548 ||||| ||||| || ||||||||||| ||||||||||||||||| |||||||||||| | Sbjct: 1269 aaccacgcgttcaccaggatcttggactcggcggggatgtcgtagccggcgagcttgccg 1210 Query: 549 tcgctgaggttcatgtgcggcaccag 574 ||| ||||||||||||||||||||| Sbjct: 1209 tcggcgaggttcatgtgcggcaccag 1184
>dbj|AK100598.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107C01, full insert sequence Length = 1838 Score = 496 bits (250), Expect = e-137 Identities = 352/386 (91%) Strand = Plus / Minus Query: 189 ggcttgcagacgatggtggcgtgcttgaggatctggttgctgaactgccctggcttctcg 248 ||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 1567 ggcttgcagacgacggtggcgtgcttgaggatctggttgctgaactggccgggcttctcg 1508 Query: 249 gtggtgtcgatcttgtcctgccccggcggcggcagcagctcgaagttctgcaccaggcgt 308 |||||||| | ||||||| ||| |||||||||||||| |||||| |||| || ||||| Sbjct: 1507 gtggtgtccaccttgtccatcccgggcggcggcagcaggtcgaagctctggacgaggcgg 1448 Query: 309 ccgagcgtgatgccgatgatgggcagcgcgaggatgatcccggggcagctccggcggccg 368 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1447 ccgagcgtgatcccgatgatgggcagcgcgaggatgatcccggggcagctgcggcggccg 1388 Query: 369 acgccgaagggcacgaaccggaagtcgttgccgtgggcctcgacggacttctcctcctcg 428 ||||||||||||||||| ||||||||||||||||| ||||| |||| |||||||||||| Sbjct: 1387 acgccgaagggcacgaagcggaagtcgttgccgtgcgcctccacggccttctcctcctcc 1328 Query: 429 aggaagcgctcgggcctgaactcgtcggcgcgcacccaccgcttggggtcgttggcgagg 488 ||||| | ||| ||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1327 aggaacctctccggcctaaactcgtcggggcgcacccaccgcttggggtcgttggcgagg 1268 Query: 489 aaccaggcgttgacgaggatcttggattcggcggggatgtcgtaaccggcgagcttggca 548 ||||| ||||| || ||||||||||| ||||||||||||||||| |||||||||||| | Sbjct: 1267 aaccacgcgttcaccaggatcttggactcggcggggatgtcgtagccggcgagcttgccg 1208 Query: 549 tcgctgaggttcatgtgcggcaccag 574 ||| ||||||||||||||||||||| Sbjct: 1207 tcggcgaggttcatgtgcggcaccag 1182
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 289 bits (146), Expect = 5e-75 Identities = 317/374 (84%) Strand = Plus / Plus Query: 201 atggtggcgtgcttgaggatctggttgctgaactgccctggcttctcggtggtgtcgatc 260 ||||||| |||||| ||||| ||| |||||||||||| ||||||||||||||||| | Sbjct: 34955260 atggtggagtgcttcaggatgtggaggctgaactgcccacccttctcggtggtgtcgacc 34955319 Query: 261 ttgtcctgccccggcggcggcagcagctcgaagttctgcaccaggcgtccgagcgtgatg 320 |||||| ||| |||||||||||||||||||||||||| || ||||| |||| |||| | Sbjct: 34955320 ctgtccttcccgggcggcggcagcagctcgaagttctggacgaggcggccgatggtgacg 34955379 Query: 321 ccgatgatgggcagcgcgaggatgatcccggggcagctccggcggccgacgccgaagggc 380 |||| ||||||||||||||||| ||| |||||||||||||| || ||| ||||| | ||| Sbjct: 34955380 ccgaggatgggcagcgcgaggacgatgccggggcagctccgccgcccggcgccggacggc 34955439 Query: 381 acgaaccggaagtcgttgccgtgggcctcgacggacttctcctcctcgaggaagcgctcg 440 | | ||| |||||||||||||| |||||||||| | |||||||||||||||| | ||| Sbjct: 34955440 aggtacctgaagtcgttgccgttggcctcgacgttcctctcctcctcgaggaacctctcc 34955499 Query: 441 ggcctgaactcgtcggcgcgcacccaccgcttggggtcgttggcgaggaaccaggcgttg 500 |||| |||||| || | ||| ||||||| |||||||||||||||| |||| |||||| Sbjct: 34955500 ggccggaactcctccggccgccgccaccgcccggggtcgttggcgaggtaccacgcgttg 34955559 Query: 501 acgaggatcttggattcggcggggatgtcgtaaccggcgagcttggcatcgctgaggttc 560 ||||| | |||| |||||||||||| |||| |||||||||| ||| |||| ||||||| Sbjct: 34955560 acgagcaccttgctctcggcggggatgccgtacccggcgagctcggcgtcgcggaggttc 34955619 Query: 561 atgtgcggcaccag 574 |||||||||||||| Sbjct: 34955620 atgtgcggcaccag 34955633
>dbj|AP003446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1529_G03 Length = 100635 Score = 289 bits (146), Expect = 5e-75 Identities = 317/374 (84%) Strand = Plus / Plus Query: 201 atggtggcgtgcttgaggatctggttgctgaactgccctggcttctcggtggtgtcgatc 260 ||||||| |||||| ||||| ||| |||||||||||| ||||||||||||||||| | Sbjct: 84624 atggtggagtgcttcaggatgtggaggctgaactgcccacccttctcggtggtgtcgacc 84683 Query: 261 ttgtcctgccccggcggcggcagcagctcgaagttctgcaccaggcgtccgagcgtgatg 320 |||||| ||| |||||||||||||||||||||||||| || ||||| |||| |||| | Sbjct: 84684 ctgtccttcccgggcggcggcagcagctcgaagttctggacgaggcggccgatggtgacg 84743 Query: 321 ccgatgatgggcagcgcgaggatgatcccggggcagctccggcggccgacgccgaagggc 380 |||| ||||||||||||||||| ||| |||||||||||||| || ||| ||||| | ||| Sbjct: 84744 ccgaggatgggcagcgcgaggacgatgccggggcagctccgccgcccggcgccggacggc 84803 Query: 381 acgaaccggaagtcgttgccgtgggcctcgacggacttctcctcctcgaggaagcgctcg 440 | | ||| |||||||||||||| |||||||||| | |||||||||||||||| | ||| Sbjct: 84804 aggtacctgaagtcgttgccgttggcctcgacgttcctctcctcctcgaggaacctctcc 84863 Query: 441 ggcctgaactcgtcggcgcgcacccaccgcttggggtcgttggcgaggaaccaggcgttg 500 |||| |||||| || | ||| ||||||| |||||||||||||||| |||| |||||| Sbjct: 84864 ggccggaactcctccggccgccgccaccgcccggggtcgttggcgaggtaccacgcgttg 84923 Query: 501 acgaggatcttggattcggcggggatgtcgtaaccggcgagcttggcatcgctgaggttc 560 ||||| | |||| |||||||||||| |||| |||||||||| ||| |||| ||||||| Sbjct: 84924 acgagcaccttgctctcggcggggatgccgtacccggcgagctcggcgtcgcggaggttc 84983 Query: 561 atgtgcggcaccag 574 |||||||||||||| Sbjct: 84984 atgtgcggcaccag 84997
>gb|AY616436.1| Agastache rugosa cinnamic acid 4-hydroxylase mRNA, complete cds.~~ Length = 1676 Score = 123 bits (62), Expect = 7e-25 Identities = 143/170 (84%) Strand = Plus / Minus Query: 243 ttctcggtggtgtcgatcttgtcctgccccggcggcggcagcagctcgaagttctgcacc 302 ||||| |||||||||||||| || |||||| || ||||||||||| |||||||||||| Sbjct: 1507 ttctctgtggtgtcgatcttcgacttccccggaggaggcagcagctcaaagttctgcacc 1448 Query: 303 aggcgtccgagcgtgatgccgatgatgggcagcgcgaggatgatcccggggcagctccgg 362 |||||||| | ||||||||| | || |||| |||||| ||||||||||||||||||| Sbjct: 1447 aggcgtcccaacgtgatgccaagaataggcaacgcgagaatgatcccggggcagctcctc 1388 Query: 363 cggccgacgccgaagggcacgaaccggaagtcgttgccgtgggcctcgac 412 | ||| || ||||| |||| | ||| |||||||||||| | ||||||||| Sbjct: 1387 ctgccaacaccgaatggcaggtacctgaagtcgttgccattggcctcgac 1338
>ref|XM_465542.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1910 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Minus Query: 326 gatgggcagcgcgaggatgatcccggggcagctccggcggccgacgccgaagggcacgaa 385 |||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||| ||| Sbjct: 1557 gatgggcagcgccaggatgatccccgggcagctgcggcggcccacgccgaagggcaggaa 1498 Query: 386 ccggaagtc 394 || |||||| Sbjct: 1497 cctgaagtc 1489 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 555 aggttcatgtgcggcaccag 574 |||||||||||||||||||| Sbjct: 1319 aggttcatgtgcggcaccag 1300
>ref|XM_465538.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1602 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Minus Query: 326 gatgggcagcgcgaggatgatcccggggcagctccggcggccgacgccgaagggcacgaa 385 |||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||| ||| Sbjct: 1452 gatgggcagcgccaggatgatccccgggcagctgcggcggcccacgccgaagggcaggaa 1393 Query: 386 ccggaagtc 394 || |||||| Sbjct: 1392 cctgaagtc 1384 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 555 aggttcatgtgcggcaccag 574 |||||||||||||||||||| Sbjct: 1214 aggttcatgtgcggcaccag 1195
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Minus Query: 326 gatgggcagcgcgaggatgatcccggggcagctccggcggccgacgccgaagggcacgaa 385 |||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||| ||| Sbjct: 15836284 gatgggcagcgccaggatgatccccgggcagctgcggcggcccacgccgaagggcaggaa 15836225 Query: 386 ccggaagtc 394 || |||||| Sbjct: 15836224 cctgaagtc 15836216 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 326 gatgggcagcgcgaggatgatcccggggcagctccggcggccgacgccgaagggcacgaa 385 |||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||| ||| Sbjct: 15816982 gatgggcagcgccaggatgatccccgggcagctgcggcggcccacgccgaagggcaggaa 15817041 Query: 386 ccggaagtc 394 || |||||| Sbjct: 15817042 cctgaagtc 15817050 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 555 aggttcatgtgcggcaccag 574 |||||||||||||||||||| Sbjct: 15836046 aggttcatgtgcggcaccag 15836027 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 555 aggttcatgtgcggcaccag 574 |||||||||||||||||||| Sbjct: 15817220 aggttcatgtgcggcaccag 15817239
>dbj|AP004850.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1342_D02 Length = 125460 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Minus Query: 326 gatgggcagcgcgaggatgatcccggggcagctccggcggccgacgccgaagggcacgaa 385 |||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||| ||| Sbjct: 94224 gatgggcagcgccaggatgatccccgggcagctgcggcggcccacgccgaagggcaggaa 94165 Query: 386 ccggaagtc 394 || |||||| Sbjct: 94164 cctgaagtc 94156 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 326 gatgggcagcgcgaggatgatcccggggcagctccggcggccgacgccgaagggcacgaa 385 |||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||| ||| Sbjct: 74922 gatgggcagcgccaggatgatccccgggcagctgcggcggcccacgccgaagggcaggaa 74981 Query: 386 ccggaagtc 394 || |||||| Sbjct: 74982 cctgaagtc 74990 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 555 aggttcatgtgcggcaccag 574 |||||||||||||||||||| Sbjct: 93986 aggttcatgtgcggcaccag 93967 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 555 aggttcatgtgcggcaccag 574 |||||||||||||||||||| Sbjct: 75160 aggttcatgtgcggcaccag 75179
>dbj|AK072588.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132G16, full insert sequence Length = 1910 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Minus Query: 326 gatgggcagcgcgaggatgatcccggggcagctccggcggccgacgccgaagggcacgaa 385 |||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||| ||| Sbjct: 1558 gatgggcagcgccaggatgatccccgggcagctgcggcggcccacgccgaagggcaggaa 1499 Query: 386 ccggaagtc 394 || |||||| Sbjct: 1498 cctgaagtc 1490 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 555 aggttcatgtgcggcaccag 574 |||||||||||||||||||| Sbjct: 1320 aggttcatgtgcggcaccag 1301
>gb|U19922.1|ZEU19922 Zinnia elegans cinnamic acid 4-hydroxylase mRNA, complete cds Length = 1648 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 260 cttgtcctgccccggcggcggcagcagctcgaagttctgcaccaggcgtccgagcgtgat 319 ||||||||| || |||||||||| ||||||||| ||||||||||| || |||| |||||| Sbjct: 1453 cttgtcctgtccgggcggcggcaacagctcgaaattctgcaccagccgcccgatcgtgat 1394
>ref|XM_368073.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07977.4) partial mRNA Length = 1020 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 433 agcgctcgggcctgaactcgtcggcg 458 |||||||||||||||||||||||||| Sbjct: 715 agcgctcgggcctgaactcgtcggcg 690
>gb|AF097664.1|AF097664 Mesembryanthemum crystallinum cinnamate 4-hydroxylase mRNA, complete cds Length = 1750 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 419 ctcctcctcgaggaagcgctcgggcctgaactc 451 ||||||||||||||| |||||||||| |||||| Sbjct: 1444 ctcctcctcgaggaaccgctcgggccggaactc 1412
>ref|NM_117451.2| Arabidopsis thaliana CYP83A1 (CYTOCHROME P450 83A1); oxygen binding AT4G13770 (CYP83A1) mRNA, complete cds Length = 1733 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 519 gcggggatgtcgtaaccggcgagcttgg 546 |||||||||||||||||||||| ||||| Sbjct: 1190 gcggggatgtcgtaaccggcgatcttgg 1163
>emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 37 Length = 199667 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 519 gcggggatgtcgtaaccggcgagcttgg 546 |||||||||||||||||||||| ||||| Sbjct: 83136 gcggggatgtcgtaaccggcgatcttgg 83163
>emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18A5 (ESSA project) Length = 118718 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 519 gcggggatgtcgtaaccggcgagcttgg 546 |||||||||||||||||||||| ||||| Sbjct: 62044 gcggggatgtcgtaaccggcgatcttgg 62071
>gb|AY102146.1| Arabidopsis thaliana AT4g13770/F18A5_160 mRNA, complete cds Length = 1509 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 519 gcggggatgtcgtaaccggcgagcttgg 546 |||||||||||||||||||||| ||||| Sbjct: 1163 gcggggatgtcgtaaccggcgatcttgg 1136
>gb|AY091779.1| Arabidopsis thaliana AT5g65110/MQN23_4 mRNA sequence Length = 3816 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 519 gcggggatgtcgtaaccggcgagcttgg 546 |||||||||||||||||||||| ||||| Sbjct: 1187 gcggggatgtcgtaaccggcgatcttgg 1160
>gb|AY075697.1| Arabidopsis thaliana AT4g13770/F18A5_160 mRNA, complete cds Length = 1686 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 519 gcggggatgtcgtaaccggcgagcttgg 546 |||||||||||||||||||||| ||||| Sbjct: 1190 gcggggatgtcgtaaccggcgatcttgg 1163
>gb|AY057637.1| Arabidopsis thaliana AT4g13770/F18A5_160 mRNA, complete cds Length = 1710 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 519 gcggggatgtcgtaaccggcgagcttgg 546 |||||||||||||||||||||| ||||| Sbjct: 1276 gcggggatgtcgtaaccggcgatcttgg 1249
>gb|AF428469.1|AF428469 Arabidopsis thaliana AT4g13770/F18A5_160 mRNA, complete cds Length = 1681 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 519 gcggggatgtcgtaaccggcgagcttgg 546 |||||||||||||||||||||| ||||| Sbjct: 1184 gcggggatgtcgtaaccggcgatcttgg 1157
>dbj|AK220835.1| Arabidopsis thaliana mRNA for cytochrome P450 monooxygenase, complete cds, clone: RAFL22-36-G17 Length = 654 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 519 gcggggatgtcgtaaccggcgagcttgg 546 |||||||||||||||||||||| ||||| Sbjct: 187 gcggggatgtcgtaaccggcgatcttgg 160
>emb|BX827552.1|CNS0A3O7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS72ZE08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1629 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 519 gcggggatgtcgtaaccggcgagcttgg 546 |||||||||||||||||||||| ||||| Sbjct: 1168 gcggggatgtcgtaaccggcgatcttgg 1141
>dbj|D78599.1| Arabidopsis thaliana mRNA for cytochrome P450 monooxygenase, complete cds, clone P450-3 Length = 1650 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 519 gcggggatgtcgtaaccggcgagcttgg 546 |||||||||||||||||||||| ||||| Sbjct: 1185 gcggggatgtcgtaaccggcgatcttgg 1158
>gb|U69134.1|ATU69134 Arabidopsis thaliana cytochrome P450 monooxygenase (CYP83) gene, complete cds Length = 3319 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 519 gcggggatgtcgtaaccggcgagcttgg 546 |||||||||||||||||||||| ||||| Sbjct: 2745 gcggggatgtcgtaaccggcgatcttgg 2718
>gb|U18929.1|ATU18929 Arabidopsis thaliana cytochrome p450 dependent monooxygenase mRNA, complete cds Length = 1551 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 519 gcggggatgtcgtaaccggcgagcttgg 546 |||||||||||||||||||||| ||||| Sbjct: 1170 gcggggatgtcgtaaccggcgatcttgg 1143
>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06, complete sequence Length = 142068 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 365 gccgacgccgaagggcacgaaccggaagtcg 395 |||| ||||||| |||||||||||||||||| Sbjct: 79033 gccggcgccgaacggcacgaaccggaagtcg 79003
>gb|AC158158.6| Mus musculus chromosome 1, clone RP23-10D8, complete sequence Length = 193479 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 57 caacaccaaagaaaaattaaacttact 83 |||||||||||||| |||||||||||| Sbjct: 97110 caacaccaaagaaatattaaacttact 97136
>gb|AC110266.15| Mus musculus chromosome 1, clone RP23-319C1, complete sequence Length = 177482 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 57 caacaccaaagaaaaattaaacttact 83 |||||||||||||| |||||||||||| Sbjct: 4472 caacaccaaagaaatattaaacttact 4498
>dbj|AK062293.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-F01, full insert sequence Length = 2395 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 365 gccgacgccgaagggcacgaaccggaagtcg 395 |||| ||||||| |||||||||||||||||| Sbjct: 1435 gccggcgccgaacggcacgaaccggaagtcg 1405
>gb|AY670393.1| Pinus taeda isolate 27 trans-cinnamate 4-hydroxylase 2 (c4h-2) gene, partial cds Length = 522 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 267 tgccccggcggcggcagcagctcgaagttctgcaccag 304 ||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 458 tgcccaggcggaggcagcagctcaaagttctgaaccag 421
>gb|AY670388.1| Pinus taeda isolate 28 trans-cinnamate 4-hydroxylase 2 (c4h-2) gene, partial cds Length = 522 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 267 tgccccggcggcggcagcagctcgaagttctgcaccag 304 ||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 458 tgcccaggcggaggcagcagctcaaagttctgaaccag 421
>gb|AY670384.1| Pinus taeda isolate 10 trans-cinnamate 4-hydroxylase 2 (c4h-2) gene, partial cds Length = 522 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 267 tgccccggcggcggcagcagctcgaagttctgcaccag 304 ||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 458 tgcccaggcggaggcagcagctcaaagttctgaaccag 421
>gb|AY670382.1| Pinus taeda isolate 30 trans-cinnamate 4-hydroxylase 2 (c4h-2) gene, partial cds Length = 522 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 267 tgccccggcggcggcagcagctcgaagttctgcaccag 304 ||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 458 tgcccaggcggaggcagcagctcaaagttctgaaccag 421
>gb|AY670380.1| Pinus taeda isolate 25 trans-cinnamate 4-hydroxylase 2 (c4h-2) gene, partial cds Length = 522 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 267 tgccccggcggcggcagcagctcgaagttctgcaccag 304 ||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 458 tgcccaggcggaggcagcagctcaaagttctgaaccag 421
>gb|AY670377.1| Pinus taeda isolate 24 trans-cinnamate 4-hydroxylase 2 (c4h-2) gene, partial cds Length = 522 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 267 tgccccggcggcggcagcagctcgaagttctgcaccag 304 ||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 458 tgcccaggcggaggcagcagctcaaagttctgaaccag 421
>gb|AY670376.1| Pinus taeda isolate 20 trans-cinnamate 4-hydroxylase 2 (c4h-2) gene, partial cds Length = 522 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 267 tgccccggcggcggcagcagctcgaagttctgcaccag 304 ||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 458 tgcccaggcggaggcagcagctcaaagttctgaaccag 421
>gb|AY670375.1| Pinus taeda isolate 15 trans-cinnamate 4-hydroxylase 2 (c4h-2) gene, partial cds Length = 522 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 267 tgccccggcggcggcagcagctcgaagttctgcaccag 304 ||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 458 tgcccaggcggaggcagcagctcaaagttctgaaccag 421
>gb|AY670372.1| Pinus taeda isolate 21 trans-cinnamate 4-hydroxylase 2 (c4h-2) gene, partial cds Length = 522 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 267 tgccccggcggcggcagcagctcgaagttctgcaccag 304 ||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 458 tgcccaggcggaggcagcagctcaaagttctgaaccag 421
>gb|AY670371.1| Pinus taeda isolate 18 trans-cinnamate 4-hydroxylase 2 (c4h-2) gene, partial cds Length = 522 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 267 tgccccggcggcggcagcagctcgaagttctgcaccag 304 ||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 458 tgcccaggcggaggcagcagctcaaagttctgaaccag 421
>gb|AY670370.1| Pinus taeda isolate 12 trans-cinnamate 4-hydroxylase 2 (c4h-2) gene, partial cds Length = 522 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 267 tgccccggcggcggcagcagctcgaagttctgcaccag 304 ||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 458 tgcccaggcggaggcagcagctcaaagttctgaaccag 421
>gb|AY670367.1| Pinus taeda isolate 23 trans-cinnamate 4-hydroxylase 2 (c4h-2) gene, partial cds Length = 522 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 267 tgccccggcggcggcagcagctcgaagttctgcaccag 304 ||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 458 tgcccaggcggaggcagcagctcaaagttctgaaccag 421
>gb|AY670363.1| Pinus taeda isolate 6 trans-cinnamate 4-hydroxylase 2 (c4h-2) gene, partial cds Length = 522 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 267 tgccccggcggcggcagcagctcgaagttctgcaccag 304 ||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 458 tgcccaggcggaggcagcagctcaaagttctgaaccag 421
>gb|AY670362.1| Pinus taeda isolate 16 trans-cinnamate 4-hydroxylase 2 (c4h-2) gene, partial cds Length = 522 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 267 tgccccggcggcggcagcagctcgaagttctgcaccag 304 ||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 458 tgcccaggcggaggcagcagctcaaagttctgaaccag 421
>ref|XM_543150.2| PREDICTED: Canis familiaris similar to PABP1-dependent poly A-specific ribonuclease subunit PAN3 (LOC486024), mRNA Length = 5767 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 347 cccggggcagctccggcggccg 368 |||||||||||||||||||||| Sbjct: 533 cccggggcagctccggcggccg 512
>gb|AF096998.1| Pinus taeda trans-cinnamate 4-hydroxylase (TC4H) mRNA, complete cds Length = 1996 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 267 tgccccggcggcggcagcagctcgaagttctgcaccag 304 ||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 1504 tgcccaggcggaggcagcagctcaaagttctgaaccag 1467
>dbj|AB232856.1| Lactuca sativa mRNA for cinnamate 4-hydroxylase, partial cds, clone: C4H1 Length = 833 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 540 agcttggcatcgctgaggttcatgtgcggcaccaggag 577 |||||||||||| |||||||||||| || |||||||| Sbjct: 795 agcttggcatcgtggaggttcatgtgtgggaccaggag 758
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 332 cagcgcgaggatgatcccgggg 353 |||||||||||||||||||||| Sbjct: 2623598 cagcgcgaggatgatcccgggg 2623619
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 265 cctgccccggcggcggcagcagctcg 290 ||||| |||||||||||||||||||| Sbjct: 187673 cctgcaccggcggcggcagcagctcg 187648
>gb|U55006.1|PEU55006 Pinus elliottii PEC18 mRNA, partial sequence Length = 404 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 269 ccccggcggcggcagcagctcgaagttctg 298 ||||||||| ||||| |||||||||||||| Sbjct: 53 ccccggcggaggcagaagctcgaagttctg 24
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 310 cgagcgtgatgccgatgatgggcag 334 |||||||| |||||||||||||||| Sbjct: 674771 cgagcgtgttgccgatgatgggcag 674747
>gb|AC124764.3| Mus musculus BAC clone RP23-166K1 from chromosome 18, complete sequence Length = 209579 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 actatttggaaatttacaaca 28 ||||||||||||||||||||| Sbjct: 60596 actatttggaaatttacaaca 60576
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 ggcggcggcagcagctcgaag 293 ||||||||||||||||||||| Sbjct: 694404 ggcggcggcagcagctcgaag 694384 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 ccggcggcggcagcagctcg 290 |||||||||||||||||||| Sbjct: 5809939 ccggcggcggcagcagctcg 5809958
>emb|BX294118.4| Zebrafish DNA sequence from clone DKEYP-38B6, complete sequence Length = 184616 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 actgtgaaacaccaaaatgca 104 ||||||||||||||||||||| Sbjct: 165388 actgtgaaacaccaaaatgca 165408
>emb|AJ583532.1| Triticum aestivum mRNA for cytochrome P450 (CYP98A12 gene) Length = 1774 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 428 gaggaagcgctcgggcctgaactcg 452 ||||||||||||||||| ||||||| Sbjct: 1311 gaggaagcgctcgggccggaactcg 1287
>ref|NM_128601.2| Arabidopsis thaliana ATC4H (CINNAMATE-4-HYDROXYLASE) AT2G30490 (ATC4H) mRNA, complete cds Length = 1803 Score = 40.1 bits (20), Expect = 7.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 522 gggatgtcgtaaccggcgagcttggcatcgctgaggttcatgtgcggcaccaggag 577 ||||| ||||| || |||||||| ||||| |||||||||||| ||||| ||||| Sbjct: 1259 gggatatcgtagccagcgagcttcgcatcatggaggttcatgtgaggcacgaggag 1204
>ref|NM_198321.2| Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) (GALNT10), transcript variant 1, mRNA Length = 5222 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cccggcggcggcagcagctc 289 |||||||||||||||||||| Sbjct: 59 cccggcggcggcagcagctc 40
>gb|AY528720.1| Danio rerio activation-induced cytidine deaminase (aicda) mRNA, complete cds Length = 889 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 catgaccgagatctgaactc 173 |||||||||||||||||||| Sbjct: 500 catgaccgagatctgaactc 481
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 ctcctcgaggaagcgctcgg 441 |||||||||||||||||||| Sbjct: 2648823 ctcctcgaggaagcgctcgg 2648804
>gb|AE008947.1| Agrobacterium tumefaciens str. C58 AT plasmid section 22 of 49 of the complete sequence Length = 11182 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 cgaggatcttggattcggcg 521 |||||||||||||||||||| Sbjct: 4297 cgaggatcttggattcggcg 4316
>gb|AE007894.1| Agrobacterium tumefaciens str. C58 plasmid AT, section 22 of 50 of the complete sequence Length = 10197 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 cgaggatcttggattcggcg 521 |||||||||||||||||||| Sbjct: 6988 cgaggatcttggattcggcg 7007
>gb|BC050333.1| Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10), mRNA (cDNA clone IMAGE:4838534), with apparent retained intron Length = 4359 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cccggcggcggcagcagctc 289 |||||||||||||||||||| Sbjct: 59 cccggcggcggcagcagctc 40
>ref|XM_976546.1| PREDICTED: Mus musculus membrane-associated ring finger (C3HC4) 9 (March9), mRNA Length = 2563 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tgccccggcggcggcagcag 286 |||||||||||||||||||| Sbjct: 798 tgccccggcggcggcagcag 817
>ref|XM_804275.1| Trypanosoma cruzi strain CL Brener 40S ribosomal protein S9 (Tc00.1047053504163.30) partial mRNA Length = 573 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 cttctcctcctcgaggaagc 435 |||||||||||||||||||| Sbjct: 267 cttctcctcctcgaggaagc 248
>ref|XM_812245.1| Trypanosoma cruzi strain CL Brener 40S ribosomal protein S9 (Tc00.1047053508543.30) partial mRNA Length = 573 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 cttctcctcctcgaggaagc 435 |||||||||||||||||||| Sbjct: 267 cttctcctcctcgaggaagc 248
>ref|XM_816173.1| Trypanosoma cruzi strain CL Brener 40S ribosomal protein S9 (Tc00.1047053506401.120) partial mRNA Length = 573 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 cttctcctcctcgaggaagc 435 |||||||||||||||||||| Sbjct: 267 cttctcctcctcgaggaagc 248
>ref|XM_816528.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508461.290) partial mRNA Length = 1707 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 264 tcctgccccggcggcggcagcagc 287 |||||||||||||||||| ||||| Sbjct: 864 tcctgccccggcggcggcggcagc 887
>ref|XM_546283.2| PREDICTED: Canis familiaris similar to GalNAc transferase 10 isoform a (LOC489165), mRNA Length = 2637 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cccggcggcggcagcagctc 289 |||||||||||||||||||| Sbjct: 752 cccggcggcggcagcagctc 733
>gb|AC079804.5| Homo sapiens BAC clone RP11-740N7 from 7, complete sequence Length = 184512 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ccaacaccaaagaaaaatta 75 |||||||||||||||||||| Sbjct: 99068 ccaacaccaaagaaaaatta 99049
>gb|AC010295.7| Homo sapiens chromosome 5 clone CTB-143H13, complete sequence Length = 108051 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 cccggcggcggcagcagctc 289 |||||||||||||||||||| Sbjct: 7435 cccggcggcggcagcagctc 7454
>ref|NM_001008403.1| Danio rerio activation-induced cytidine deaminase (aicda), mRNA Length = 889 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 catgaccgagatctgaactc 173 |||||||||||||||||||| Sbjct: 500 catgaccgagatctgaactc 481
>ref|XM_775811.1| PREDICTED: Strongylocentrotus purpuratus similar to CG5262-PA (LOC575408), mRNA Length = 1284 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 agcgtgatgccgatgatggg 331 |||||||||||||||||||| Sbjct: 917 agcgtgatgccgatgatggg 898
>gb|BT008875.1| Arabidopsis thaliana At2g30490 mRNA, complete cds Length = 1518 Score = 40.1 bits (20), Expect = 7.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 522 gggatgtcgtaaccggcgagcttggcatcgctgaggttcatgtgcggcaccaggag 577 ||||| ||||| || |||||||| ||||| |||||||||||| ||||| ||||| Sbjct: 1172 gggatatcgtagccagcgagcttcgcatcatggaggttcatgtgaggcacgaggag 1117
>emb|Y00624.1|ACMHC Acanthamoeba castellanii nonmuscle myosin heavy chain gene Length = 5894 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 ggcctcgacggacttctcct 423 |||||||||||||||||||| Sbjct: 5463 ggcctcgacggacttctcct 5444
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tccgagcgtgatgccgatga 327 |||||||||||||||||||| Sbjct: 407531 tccgagcgtgatgccgatga 407550
>gb|AC148832.5| Pan troglodytes BAC clone CH251-48K6 from chromosome 7, complete sequence Length = 186606 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 ccaacaccaaagaaaaatta 75 |||||||||||||||||||| Sbjct: 46922 ccaacaccaaagaaaaatta 46941
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 553 tgaggttcatgtgcggcacc 572 |||||||||||||||||||| Sbjct: 4887799 tgaggttcatgtgcggcacc 4887780
>dbj|AK127135.1| Homo sapiens cDNA FLJ45192 fis, clone BRAWH3049544, weakly similar to Polypeptide N-acetylgalactosaminyltransferase (EC 2.4.1.41) Length = 3938 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cccggcggcggcagcagctc 289 |||||||||||||||||||| Sbjct: 20 cccggcggcggcagcagctc 1
>dbj|AB234902.1| Verbena x hybrida mRNA for Cinnamic acid 4-hydroxylase, complete cds, cultivar: Tapien Pink Length = 1768 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 315 gtgatgccgatgatgggcagcgcgaggatgatcccggggcagct 358 |||||||| | |||||||||||| || || || ||||||||||| Sbjct: 1434 gtgatgcccaggatgggcagcgcaagaataattccggggcagct 1391
>gb|U93215.3| Arabidopsis thaliana chromosome 2 BAC T6B20 genomic sequence, complete sequence Length = 104861 Score = 40.1 bits (20), Expect = 7.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 522 gggatgtcgtaaccggcgagcttggcatcgctgaggttcatgtgcggcaccaggag 577 ||||| ||||| || |||||||| ||||| |||||||||||| ||||| ||||| Sbjct: 59169 gggatatcgtagccagcgagcttcgcatcatggaggttcatgtgaggcacgaggag 59114
>gb|AF368379.1| Nicotiana tabacum elicitor-inducible cytochrome P450 (CYP73A28) mRNA, complete cds Length = 1693 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 330 ggcagcgcgaggatgatcccggggcagctccg 361 ||||| || |||||||| |||||||||||||| Sbjct: 1470 ggcagtgcaaggatgattccggggcagctccg 1439
>gb|AF368378.1| Nicotiana tabacum elicitor-inducible cytochrome P450 (CYP73A27) mRNA, complete cds Length = 1745 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 330 ggcagcgcgaggatgatcccggggcagctccg 361 ||||| || |||||||| |||||||||||||| Sbjct: 1470 ggcagtgcaaggatgattccggggcagctccg 1439
>dbj|AK158026.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930017K03 product:LOC92979 protein (Fragment) homolog [Homo sapiens], full insert sequence Length = 2001 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tgccccggcggcggcagcag 286 |||||||||||||||||||| Sbjct: 271 tgccccggcggcggcagcag 290
>gb|AY065145.1| Arabidopsis thaliana cinnamate-4-hydroxylase (At2g30490; T6B20.16) mRNA, complete cds Length = 1794 Score = 40.1 bits (20), Expect = 7.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 522 gggatgtcgtaaccggcgagcttggcatcgctgaggttcatgtgcggcaccaggag 577 ||||| ||||| || |||||||| ||||| |||||||||||| ||||| ||||| Sbjct: 1259 gggatatcgtagccagcgagcttcgcatcatggaggttcatgtgaggcacgaggag 1204
>gb|AC148692.1| Macaca mulatta Major Histocompatibility Complex BAC MMU235E11, complete sequence Length = 159875 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 gctgaactgccctggcttct 246 |||||||||||||||||||| Sbjct: 47514 gctgaactgccctggcttct 47495
>gb|AC148662.1| Macaca mulatta Major Histocompatibility Complex BAC MMU009PO6, complete sequence Length = 191271 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 gctgaactgccctggcttct 246 |||||||||||||||||||| Sbjct: 177899 gctgaactgccctggcttct 177880
>gb|AC148660.1| Macaca mulatta Major Histocompatibility Complex BAC MMU007F01, complete sequence Length = 176267 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 gctgaactgccctggcttct 246 |||||||||||||||||||| Sbjct: 2794 gctgaactgccctggcttct 2775
>emb|BX819707.1|CNS0AA1Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS19ZE10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1751 Score = 40.1 bits (20), Expect = 7.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 522 gggatgtcgtaaccggcgagcttggcatcgctgaggttcatgtgcggcaccaggag 577 ||||| ||||| || |||||||| ||||| |||||||||||| ||||| ||||| Sbjct: 1246 gggatatcgtagccagcgagcttcgcatcatggaggttcatgtgaggcacgaggag 1191
>emb|BX820902.1|CNS0A9NW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH7ZF08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1679 Score = 40.1 bits (20), Expect = 7.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 522 gggatgtcgtaaccggcgagcttggcatcgctgaggttcatgtgcggcaccaggag 577 ||||| ||||| || |||||||| ||||| |||||||||||| ||||| ||||| Sbjct: 1223 gggatatcgtagccagcgagcttcgcatcatggaggttcatgtgaggcacgaggag 1168
>gb|AC113052.10| Mus musculus chromosome 5, clone RP23-250D22, complete sequence Length = 193698 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 gaggaagcgctcgggcctga 447 |||||||||||||||||||| Sbjct: 73844 gaggaagcgctcgggcctga 73825
>dbj|D78596.1| Arabidopsis thaliana mRNA for trans-cinnamate 4-hydroxylase, complete cds Length = 1711 Score = 40.1 bits (20), Expect = 7.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 522 gggatgtcgtaaccggcgagcttggcatcgctgaggttcatgtgcggcaccaggag 577 ||||| ||||| || |||||||| ||||| |||||||||||| ||||| ||||| Sbjct: 1228 gggatatcgtagccagcgagcttcgcatcatggaggttcatgtgaggcacgaggag 1173
>gb|DQ075002.1| Malus x domestica cinnamic acid hydroxylase (C4H1) mRNA, complete cds Length = 1946 Score = 40.1 bits (20), Expect = 7.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 251 ggtgtcgatcttgtcctgccccggcggcggcagcagctcgaagttctg 298 |||||||| |||| ||| || ||||| ||||| |||||||||||||| Sbjct: 1737 ggtgtcgagcttggactgtcctggcggaggcagaagctcgaagttctg 1690
>gb|U37235.1|ATU37235 Arabidopsis thaliana cinnamate 4-hydroxylase (CYP73A5) mRNA, complete cds Length = 1735 Score = 40.1 bits (20), Expect = 7.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 522 gggatgtcgtaaccggcgagcttggcatcgctgaggttcatgtgcggcaccaggag 577 ||||| ||||| || |||||||| ||||| |||||||||||| ||||| ||||| Sbjct: 1220 gggatatcgtagccagcgagcttcgcatcatggaggttcatgtgaggcacgaggag 1165
>ref|NM_001033262.1| Mus musculus membrane-associated ring finger (C3HC4) 9 (March9), mRNA Length = 2001 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tgccccggcggcggcagcag 286 |||||||||||||||||||| Sbjct: 271 tgccccggcggcggcagcag 290
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 gccccggcggcggcagcagc 287 |||||||||||||||||||| Sbjct: 2637 gccccggcggcggcagcagc 2656
>gb|AC131760.4| Mus musculus BAC clone RP24-220M2 from 10, complete sequence Length = 173472 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tgccccggcggcggcagcag 286 |||||||||||||||||||| Sbjct: 102945 tgccccggcggcggcagcag 102964
>gb|AC134329.3| Mus musculus BAC clone RP24-310D17 from 10, complete sequence Length = 159173 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tgccccggcggcggcagcag 286 |||||||||||||||||||| Sbjct: 25079 tgccccggcggcggcagcag 25098
>emb|CR848818.10| Zebrafish DNA sequence from clone DKEY-38O19 in linkage group 16, complete sequence Length = 208738 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 catgaccgagatctgaactc 173 |||||||||||||||||||| Sbjct: 273 catgaccgagatctgaactc 254
>gb|U71081.1|ATU71081 Arabidopsis thaliana cinnamate-4-hydroxylase (atC4H) mRNA, complete cds Length = 1727 Score = 40.1 bits (20), Expect = 7.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 522 gggatgtcgtaaccggcgagcttggcatcgctgaggttcatgtgcggcaccaggag 577 ||||| ||||| || |||||||| ||||| |||||||||||| ||||| ||||| Sbjct: 1227 gggatatcgtagccagcgagcttcgcatcatggaggttcatgtgaggcacgaggag 1172
>gb|U71080.1|ATU71080 Arabidopsis thaliana cinnamate-4-hydroxylase (atC4H) gene, complete cds Length = 5432 Score = 40.1 bits (20), Expect = 7.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 522 gggatgtcgtaaccggcgagcttggcatcgctgaggttcatgtgcggcaccaggag 577 ||||| ||||| || |||||||| ||||| |||||||||||| ||||| ||||| Sbjct: 4428 gggatatcgtagccagcgagcttcgcatcatggaggttcatgtgaggcacgaggag 4373
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 gcgtgatgccgatgatgggc 332 |||||||||||||||||||| Sbjct: 2513672 gcgtgatgccgatgatgggc 2513653 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,594,365 Number of Sequences: 3902068 Number of extensions: 4594365 Number of successful extensions: 110153 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 108884 Number of HSP's gapped (non-prelim): 1266 length of query: 577 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 554 effective length of database: 17,143,297,704 effective search space: 9497386928016 effective search space used: 9497386928016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)