Clone Information

BLAST Search Result

Clone Name	rbags27m06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	GLND_CHRVO (Q7NTY6) [Protein-PII] uridylyltransferase (EC 2.7.7....	40	0.004
2	GLND_SILPO (Q5LWE5) [Protein-PII] uridylyltransferase (EC 2.7.7....	38	0.017
3	GLND_AGRT5 (Q8UIF1) [Protein-PII] uridylyltransferase (EC 2.7.7....	37	0.023
4	GLND_RHOS4 (Q3J5H6) [Protein-PII] uridylyltransferase (EC 2.7.7....	37	0.023
5	GLND_CAUCR (Q9AC53) [Protein-PII] uridylyltransferase (EC 2.7.7....	35	0.11
6	GLND_RHILV (Q9RAE4) [Protein-PII] uridylyltransferase (EC 2.7.7....	35	0.11
7	GLND_RHITR (Q53245) [Protein-PII] uridylyltransferase (EC 2.7.7....	35	0.11
8	GLND_RHOPA (P62223) [Protein-PII] uridylyltransferase (EC 2.7.7....	35	0.15
9	GLND_BRUSU (Q8G312) [Protein-PII] uridylyltransferase (EC 2.7.7....	34	0.19
10	GLND_BRUME (Q8YES3) [Protein-PII] uridylyltransferase (EC 2.7.7....	34	0.19
11	GLND_BRUAB (Q57FN0) [Protein-PII] uridylyltransferase (EC 2.7.7....	34	0.19
12	GLND_BRUA2 (Q2YNZ1) [Protein-PII] uridylyltransferase (EC 2.7.7....	34	0.19
13	GLND_XANCP (Q8PAU4) [Protein-PII] uridylyltransferase (EC 2.7.7....	34	0.25
14	GLND_XANC8 (Q4USS0) [Protein-PII] uridylyltransferase (EC 2.7.7....	34	0.25
15	GLND_XANC5 (Q3BVJ6) [Protein-PII] uridylyltransferase (EC 2.7.7....	34	0.25
16	GLND_XANAC (Q8PMJ8) [Protein-PII] uridylyltransferase (EC 2.7.7....	34	0.25
17	GLND_PSEAE (Q9Z9H0) [Protein-PII] uridylyltransferase (EC 2.7.7....	33	0.33
18	GLND_BRAJA (Q89VX9) [Protein-PII] uridylyltransferase (EC 2.7.7....	33	0.33
19	GLND_AZOBR (Q8RQD1) [Protein-PII] uridylyltransferase (EC 2.7.7....	33	0.43
20	GLND_NITWN (Q3SWE0) [Protein-PII] uridylyltransferase (EC 2.7.7....	33	0.43
21	GLND_LEGPL (Q5WVX6) [Protein-PII] uridylyltransferase (EC 2.7.7....	33	0.43
22	GLND_LEGPH (Q5ZUS2) [Protein-PII] uridylyltransferase (EC 2.7.7....	33	0.43
23	GLND_LEGPA (Q5X4J1) [Protein-PII] uridylyltransferase (EC 2.7.7....	33	0.43
24	SPOT_SPICI (O34098) Guanosine-3',5'-bis(diphosphate) 3'-pyrophos...	33	0.56
25	GLND_PSYAR (Q4FUP5) [Protein-PII] uridylyltransferase (EC 2.7.7....	33	0.56
26	GLND_XANOR (Q5H1D3) [Protein-PII] uridylyltransferase (EC 2.7.7....	32	0.73
27	GLND_XANOM (Q2P497) [Protein-PII] uridylyltransferase (EC 2.7.7....	32	0.73
28	GLND_RHILO (Q98C27) [Protein-PII] uridylyltransferase (EC 2.7.7....	32	0.73
29	GLND_THICR (Q31G41) [Protein-PII] uridylyltransferase (EC 2.7.7....	32	0.95
30	MALK_VIBCH (Q9KL04) Maltose/maltodextrin import ATP-binding prot...	32	0.95
31	UVRC_MYCBV (O84898) UvrABC system protein C (Protein uvrC) (Exci...	31	1.6
32	GLND_GLUOX (Q5FPT6) [Protein-PII] uridylyltransferase (EC 2.7.7....	31	1.6
33	GLND_BURS3 (Q39F41) [Protein-PII] uridylyltransferase (EC 2.7.7....	31	2.1
34	GLND_AZOVI (P36223) [Protein-PII] uridylyltransferase (EC 2.7.7....	31	2.1
35	GLND_PSEF5 (Q4KHH8) [Protein-PII] uridylyltransferase (EC 2.7.7....	30	2.8
36	GLND_BURPS (Q63T10) [Protein-PII] uridylyltransferase (EC 2.7.7....	30	2.8
37	GLND_BURP1 (Q3JR26) [Protein-PII] uridylyltransferase (EC 2.7.7....	30	2.8
38	GLND_BURMA (Q62JC2) [Protein-PII] uridylyltransferase (EC 2.7.7....	30	2.8
39	GLND_PSEU2 (Q4ZWT0) [Protein-PII] uridylyltransferase (EC 2.7.7....	30	2.8
40	GLND_PSESM (Q886P5) [Protein-PII] uridylyltransferase (EC 2.7.7....	30	2.8
41	GLND_PSE14 (Q48F57) [Protein-PII] uridylyltransferase (EC 2.7.7....	30	2.8
42	CLPB_PHOPR (Q6LMY0) Chaperone clpB	30	2.8
43	PHNC_DESVH (Q72AQ6) Phosphonates import ATP-binding protein phnC...	30	3.6
44	GLND_COLP3 (Q485H4) [Protein-PII] uridylyltransferase (EC 2.7.7....	30	3.6
45	GLND_ERWCT (Q6D8E5) [Protein-PII] uridylyltransferase (EC 2.7.7....	30	3.6
46	LON2_MYXXA (P36774) ATP-dependent protease La 2 (EC 3.4.21.53)	30	3.6
47	HLYB_ECO57 (Q46717) Alpha-hemolysin translocation ATP-binding pr...	30	3.6
48	GLND_PSEPK (Q88MI2) [Protein-PII] uridylyltransferase (EC 2.7.7....	30	4.7
49	RPOB_DEHE1 (Q3Z8V4) DNA-directed RNA polymerase beta chain (EC 2...	30	4.7
50	GLND_RHIME (P56884) [Protein-PII] uridylyltransferase (EC 2.7.7....	30	4.7
51	GLND_YERPS (Q667I7) [Protein-PII] uridylyltransferase (EC 2.7.7....	30	4.7
52	GLND_YERPE (Q8ZH68) [Protein-PII] uridylyltransferase (EC 2.7.7....	30	4.7
53	OPPF_STRP8 (Q8P2L5) Oligopeptide transport ATP-binding protein oppF	30	4.7
54	OPPF_STRP6 (Q5XDU4) Oligopeptide transport ATP-binding protein oppF	30	4.7
55	OPPF_STRP3 (P0A2V7) Oligopeptide transport ATP-binding protein oppF	30	4.7
56	OPPF_STRP1 (P0A2V6) Oligopeptide transport ATP-binding protein oppF	30	4.7
57	RPOB_DEHSC (Q3ZX01) DNA-directed RNA polymerase beta chain (EC 2...	30	4.7
58	GLND_VIBPA (Q87MD6) [Protein-PII] uridylyltransferase (EC 2.7.7....	30	4.7
59	GLND_PHOPR (Q6LN22) [Protein-PII] uridylyltransferase (EC 2.7.7....	30	4.7
60	WAPA_BACSU (Q07833) Wall-associated protein precursor	29	6.2
61	GLND_SHISS (Q3Z5J1) [Protein-PII] uridylyltransferase (EC 2.7.7....	29	6.2
62	GLND_SHIFL (Q83MD4) [Protein-PII] uridylyltransferase (EC 2.7.7....	29	6.2
63	GLND_SHIBS (Q325X3) [Protein-PII] uridylyltransferase (EC 2.7.7....	29	6.2
64	GLND_ECOLI (P27249) [Protein-PII] uridylyltransferase (EC 2.7.7....	29	6.2
65	GLND_ECOL6 (Q8CY19) [Protein-PII] uridylyltransferase (EC 2.7.7....	29	6.2
66	GLND_ECO57 (Q8X8Y6) [Protein-PII] uridylyltransferase (EC 2.7.7....	29	6.2
67	GLND_SHIDS (Q32JU2) [Protein-PII] uridylyltransferase (EC 2.7.7....	29	8.1
68	GLND_THIDA (Q3SKP1) [Protein-PII] uridylyltransferase (EC 2.7.7....	29	8.1

>GLND_CHRVO (Q7NTY6) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
            uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 856

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
 Frame = -3

Query: 465  DDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS---YRGK 295
            DD     +L + + DRPGLL  + K++AD  + V+S +  T G  A+  F VS    +  
Sbjct: 781  DDKDSDFILSIVAGDRPGLLARIAKVLADYRLNVRSAKIMTLGGRAEDSFQVSGAALKDD 840

Query: 294  PLIKALQQVLANSLR 250
                AL+  L  +LR
Sbjct: 841  KTALALEAALITALR 855

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>GLND_SILPO (Q5LWE5) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
            uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 908

 Score = 37.7 bits (86), Expect = 0.017
 Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
 Frame = -3

Query: 492  DIATHIEIYDDGPE-RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKF 316
            ++ THI   ++G +  +++ V++ DRPGLL DL + +A  N+ + +    T G      F
Sbjct: 812  NVPTHITFDNEGSDIYTIIEVDTRDRPGLLYDLARALAAANVYIANAVIATYGEQVVDSF 871

Query: 315  HVS--YRGKPLIKALQQVLANSLR 250
            +V   +  K   +A Q+ L   LR
Sbjct: 872  YVKDMFGLKYHSEAKQRTLETKLR 895

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>GLND_AGRT5 (Q8UIF1) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 942

 Score = 37.4 bits (85), Expect = 0.023
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = -3

Query: 447 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 307
           +++ VE  DRPGLL D+  +IAD+++ + S    T G      F+V+
Sbjct: 840 TVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886

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>GLND_RHOS4 (Q3J5H6) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
            uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 930

 Score = 37.4 bits (85), Expect = 0.023
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = -3

Query: 483  THIEIYDDGPE-RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHV 310
            THI   ++G +  +++ V++ DRPGLL DL + +A  NI + S    T G      F+V
Sbjct: 838  THIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYV 896

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>GLND_CAUCR (Q9AC53) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
            uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 940

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = -3

Query: 489  IATHIEIYDDGPERSLLVVESA-DRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFH 313
            IA  + I +D    + +V  S  DRPGLL  L K +AD  +++QS   D  G  A   F+
Sbjct: 832  IAPSVTIDNDASNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFY 891

Query: 312  V 310
            V
Sbjct: 892  V 892

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>GLND_RHILV (Q9RAE4) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 944

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 15/47 (31%), Positives = 29/47 (61%)
 Frame = -3

Query: 447 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 307
           +++ VE  DRPGLL ++  +++D+++ +QS    T G      F+V+
Sbjct: 838 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVT 884

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>GLND_RHITR (Q53245) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 948

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 15/47 (31%), Positives = 29/47 (61%)
 Frame = -3

Query: 447 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 307
           +++ VE  DRPGLL ++  +++D+++ +QS    T G      F+V+
Sbjct: 839 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 885

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>GLND_RHOPA (P62223) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
            uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 929

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = -3

Query: 489  IATHIEIYDDGPER-SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFH 313
            +   +EI ++  +R +++ V   DRPGLL  L   I+ +N+ + S    T G  A+  F+
Sbjct: 833  VEPEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFY 892

Query: 312  VS 307
            V+
Sbjct: 893  VT 894

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>GLND_BRUSU (Q8G312) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 934

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 447 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 307
           +++ VE  DRPGLL +L  +I+D+++ + S    T G      F+V+
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893

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>GLND_BRUME (Q8YES3) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 934

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 447 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 307
           +++ VE  DRPGLL +L  +I+D+++ + S    T G      F+V+
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893

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>GLND_BRUAB (Q57FN0) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 934

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 447 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 307
           +++ VE  DRPGLL +L  +I+D+++ + S    T G      F+V+
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893

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>GLND_BRUA2 (Q2YNZ1) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 934

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = -3

Query: 447 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 307
           +++ VE  DRPGLL +L  +I+D+++ + S    T G      F+V+
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVT 893

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>GLND_XANCP (Q8PAU4) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
            uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 869

 Score = 33.9 bits (76), Expect = 0.25
 Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = -3

Query: 459  GPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS-YRGKPLIK 283
            G  R+ + + + DRPGLL D+  ++   ++ V      T G  A+ +F ++    +PL  
Sbjct: 793  GGRRTRISLVAPDRPGLLADVAHVLRMQHLRVHDARIATFGERAEDQFQITDEHDRPLPD 852

Query: 282  ALQQVLANSL 253
            A +Q L ++L
Sbjct: 853  AARQALRDAL 862

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>GLND_XANC8 (Q4USS0) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
            uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 869

 Score = 33.9 bits (76), Expect = 0.25
 Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = -3

Query: 459  GPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS-YRGKPLIK 283
            G  R+ + + + DRPGLL D+  ++   ++ V      T G  A+ +F ++    +PL  
Sbjct: 793  GGRRTRISLVAPDRPGLLADVAHVLRMQHLRVHDARIATFGERAEDQFQITDEHDRPLPD 852

Query: 282  ALQQVLANSL 253
            A +Q L ++L
Sbjct: 853  AARQALRDAL 862

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>GLND_XANC5 (Q3BVJ6) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
            uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 869

 Score = 33.9 bits (76), Expect = 0.25
 Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
 Frame = -3

Query: 459  GPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS-YRGKPLIK 283
            G  R+ + + + DRPGLL D+  ++   ++ V      T G  A+ +F ++    +PL +
Sbjct: 793  GGRRTRISLVAPDRPGLLADVAHVLRMQHLRVHDARIATFGERAEDQFQITDEHDRPLSE 852

Query: 282  ALQQVLANSL 253
            + +Q L ++L
Sbjct: 853  SARQALRDAL 862

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>GLND_XANAC (Q8PMJ8) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
            uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 869

 Score = 33.9 bits (76), Expect = 0.25
 Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
 Frame = -3

Query: 459  GPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS-YRGKPLIK 283
            G  R+ + + + DRPGLL D+  ++   ++ V      T G  A+ +F ++    +PL +
Sbjct: 793  GGRRTRISLVAPDRPGLLADVAHVLRMQHLRVHDARIATFGERAEDQFQITDEHDRPLSE 852

Query: 282  ALQQVLANSL 253
            + +Q L ++L
Sbjct: 853  SARQALRDAL 862

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>GLND_PSEAE (Q9Z9H0) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
            uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 900

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
 Frame = -3

Query: 447  SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS-YRGKP-----LI 286
            S+L V + DRPGLL  +  I  D +++VQ+ +  T G   +  F+++  R +P     L 
Sbjct: 815  SVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDLC 874

Query: 285  KALQQVLANSL 253
            K LQ  L   L
Sbjct: 875  KRLQAALVEQL 885

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>GLND_BRAJA (Q89VX9) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 929

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = -3

Query: 447 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 307
           +++ V   DRPGLL +L   I+ +N+ + S    T G  A+  F+V+
Sbjct: 849 TVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVT 895

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>GLND_AZOBR (Q8RQD1) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 933

 Score = 33.1 bits (74), Expect = 0.43
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -3

Query: 447 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHV 310
           +++ V   DRPGLL DL + + ++ + + S +  T G  A   F+V
Sbjct: 858 TVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYV 903

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>GLND_NITWN (Q3SWE0) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 925

 Score = 33.1 bits (74), Expect = 0.43
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = -3

Query: 447 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 307
           +++ V   DRPGLL  L   I+ +N+ + S    T G  A+  F+V+
Sbjct: 848 TMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVT 894

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>GLND_LEGPL (Q5WVX6) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 861

 Score = 33.1 bits (74), Expect = 0.43
 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = -3

Query: 492 DIATHIEIYDDGPE-RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKF 316
           ++ T I   DD    ++ L + + DRPGLL  + ++   +NI + + +  T G   +  F
Sbjct: 771 NVKTQINFIDDNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMF 830

Query: 315 HVS 307
           ++S
Sbjct: 831 YIS 833

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>GLND_LEGPH (Q5ZUS2) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 861

 Score = 33.1 bits (74), Expect = 0.43
 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = -3

Query: 492 DIATHIEIYDDGPE-RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKF 316
           ++ T I   DD    ++ L + + DRPGLL  + ++   +NI + + +  T G   +  F
Sbjct: 771 NVKTQINFIDDNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMF 830

Query: 315 HVS 307
           ++S
Sbjct: 831 YIS 833

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>GLND_LEGPA (Q5X4J1) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 861

 Score = 33.1 bits (74), Expect = 0.43
 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = -3

Query: 492 DIATHIEIYDDGPE-RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKF 316
           ++ T I   DD    ++ L + + DRPGLL  + ++   +NI + + +  T G   +  F
Sbjct: 771 NVKTQINFIDDNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMF 830

Query: 315 HVS 307
           ++S
Sbjct: 831 YIS 833

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>SPOT_SPICI (O34098) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase|
           (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate
           guanosine-3'-pyrophosphohydrolase)
          Length = 749

 Score = 32.7 bits (73), Expect = 0.56
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -3

Query: 435 VESADRPGLLVDLVKIIADINITVQSGEFDTEG 337
           +E+ DRP LLVD+ K+++ +N +VQ    +  G
Sbjct: 677 IEAIDRPALLVDVTKVLSHLNASVQMMSANVSG 709

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>GLND_PSYAR (Q4FUP5) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
            uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 915

 Score = 32.7 bits (73), Expect = 0.56
 Identities = 18/73 (24%), Positives = 37/73 (50%)
 Frame = -3

Query: 498  DVDIATHIEIYDDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAK 319
            DV+   + E ++D   + ++ +E+ D+PGLL  + ++     I V +    T G  A+  
Sbjct: 823  DVETTINFE-FNDASSQHIMSLETLDQPGLLARVGQVFLQQQIEVHAARITTLGERAEDM 881

Query: 318  FHVSYRGKPLIKA 280
            F++S +    + A
Sbjct: 882  FYISDQNDQALSA 894

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>GLND_XANOR (Q5H1D3) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 869

 Score = 32.3 bits (72), Expect = 0.73
 Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = -3

Query: 450 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS-YRGKPLIKALQ 274
           R+ + + + DRPGLL D+  ++   ++ V      T G  A+ +F ++    +PL ++ +
Sbjct: 796 RTRISLVAPDRPGLLADVAHVLRVQHLRVHDARIATFGERAEDQFQITDEHDRPLSESAR 855

Query: 273 QVLANSL 253
           Q L ++L
Sbjct: 856 QALRDAL 862

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>GLND_XANOM (Q2P497) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 869

 Score = 32.3 bits (72), Expect = 0.73
 Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = -3

Query: 450 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS-YRGKPLIKALQ 274
           R+ + + + DRPGLL D+  ++   ++ V      T G  A+ +F ++    +PL ++ +
Sbjct: 796 RTRISLVAPDRPGLLADVAHVLRVQHLRVHDARIATFGERAEDQFQITDEHDRPLSESAR 855

Query: 273 QVLANSL 253
           Q L ++L
Sbjct: 856 QALRDAL 862

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>GLND_RHILO (Q98C27) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 933

 Score = 32.3 bits (72), Expect = 0.73
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = -3

Query: 447 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 307
           S++ VE  DRPGLL ++   ++D+++ + S    T G      F+V+
Sbjct: 847 SVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVT 893

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>GLND_THICR (Q31G41) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
            uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 888

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
 Frame = -3

Query: 492  DIATHIEIYDDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFH 313
            ++ THI+  +   E + L + + D PGLL  + +      I V   + +T G  A+  F 
Sbjct: 801  EMPTHIQFQEINEELTELSISTKDIPGLLAKIGQAFKSCKIRVHDAKINTVGEKAEDTFM 860

Query: 312  VSYRGKPLI------KALQQVLANSL 253
            +S      I      + L+Q L N++
Sbjct: 861  ISSTTNESIHTRHSQEELKQALLNNI 886

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>MALK_VIBCH (Q9KL04) Maltose/maltodextrin import ATP-binding protein malK (EC|
           3.6.3.19)
          Length = 373

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 16/51 (31%), Positives = 30/51 (58%)
 Frame = -1

Query: 239 GGRRQRMPVSRQMVTNPHFMIVHDT*YLPEAGTIVQIIPEISVITQKK*CT 87
           GG+RQR+ + R +V+ P+  ++ +     +A   VQ+  EI+ + +K  CT
Sbjct: 136 GGQRQRVAIGRTLVSQPNVFLLDEPLSNLDAALRVQMRSEITKLQRKLGCT 186

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>UVRC_MYCBV (O84898) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 571

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 18/61 (29%), Positives = 31/61 (50%)
 Frame = -3

Query: 456 PERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVSYRGKPLIKAL 277
           PE ++L+++    P L V L+K    IN++ +    D++       F   Y  KP++K L
Sbjct: 89  PEFNILLLDDRKYPYLKVQLLKDSLLINLSRKVNAKDSKNTFYYGPFPSGYGAKPILKLL 148

Query: 276 Q 274
           Q
Sbjct: 149 Q 149

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>GLND_GLUOX (Q5FPT6) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
            uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 949

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -3

Query: 447  SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHV 310
            +++ V   DRPGLL D+   ++  ++ + S    T G+ A   F+V
Sbjct: 869  TVIEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGMRAVDVFYV 914

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>GLND_BURS3 (Q39F41) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 858

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -3

Query: 465 DDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 337
           D+  +  +L V + DRPGLL  + +++A+  I V +   +T G
Sbjct: 783 DERGQYYILSVSANDRPGLLYSIARVLAEHRIGVHAARINTLG 825

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>GLND_AZOVI (P36223) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 899

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = -3

Query: 447 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 307
           ++L + + DRPGLL  + KI  D ++++Q+ +  T G   +  F V+
Sbjct: 815 TILEIIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFVT 861

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>GLND_PSEF5 (Q4KHH8) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 900

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
 Frame = -3

Query: 486 ATHIEIYDDGPERSLLVVE--SADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFH 313
           A  + I++D  +R + V+E  + DRPGLL  + KI  + ++++Q+ +  T G   +  F 
Sbjct: 801 APEVTIHNDA-QRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFF 859

Query: 312 VS 307
           ++
Sbjct: 860 IT 861

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>GLND_BURPS (Q63T10) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 858

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = -3

Query: 465 DDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 337
           D+  +  +L V + DRPGLL  + +++A+  + V +   +T G
Sbjct: 783 DERGQYYILSVSANDRPGLLYSIARVLAEHRVGVHAARINTLG 825

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>GLND_BURP1 (Q3JR26) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 858

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = -3

Query: 465 DDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 337
           D+  +  +L V + DRPGLL  + +++A+  + V +   +T G
Sbjct: 783 DERGQYYILSVSANDRPGLLYSIARVLAEHRVGVHAARINTLG 825

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>GLND_BURMA (Q62JC2) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 858

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = -3

Query: 465 DDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 337
           D+  +  +L V + DRPGLL  + +++A+  + V +   +T G
Sbjct: 783 DERGQYYILSVSANDRPGLLYSIARVLAEHRVGVHAARINTLG 825

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>GLND_PSEU2 (Q4ZWT0) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 898

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
 Frame = -3

Query: 486 ATHIEIYDDGPERSLLVVE--SADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFH 313
           A  + I++D  +R + V+E  + DRPGLL  + KI  + ++++Q+ +  T G   +  F 
Sbjct: 800 APQVTIHNDA-QRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFF 858

Query: 312 VS 307
           ++
Sbjct: 859 IT 860

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>GLND_PSESM (Q886P5) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 898

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
 Frame = -3

Query: 486 ATHIEIYDDGPERSLLVVE--SADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFH 313
           A  + I++D  +R + V+E  + DRPGLL  + KI  + ++++Q+ +  T G   +  F 
Sbjct: 800 APQVTIHNDA-QRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFF 858

Query: 312 VS 307
           ++
Sbjct: 859 IT 860

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>GLND_PSE14 (Q48F57) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 898

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
 Frame = -3

Query: 486 ATHIEIYDDGPERSLLVVE--SADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFH 313
           A  + I++D  +R + V+E  + DRPGLL  + KI  + ++++Q+ +  T G   +  F 
Sbjct: 800 APQVTIHNDA-QRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFF 858

Query: 312 VS 307
           ++
Sbjct: 859 IT 860

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>CLPB_PHOPR (Q6LMY0) Chaperone clpB|
          Length = 857

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -3

Query: 381 DINITVQSGEFDTEGLLAKAKFHVSYRGKPLIKALQQVLANSL 253
           D  +TVQ    D    +AKA F   Y  +PL +A+QQ + N L
Sbjct: 790 DYELTVQESALD---FVAKAGFDPVYGARPLKRAIQQYIENPL 829

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>PHNC_DESVH (Q72AQ6) Phosphonates import ATP-binding protein phnC (EC 3.6.3.28)|
          Length = 265

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 12/48 (25%), Positives = 28/48 (58%)
 Frame = -1

Query: 239 GGRRQRMPVSRQMVTNPHFMIVHDT*YLPEAGTIVQIIPEISVITQKK 96
           GG+RQR+ ++R ++  PH ++  +     +  T V+I+  +  + +K+
Sbjct: 164 GGQRQRVGIARAVMQEPHILLADEPTSSLDPKTSVEIMELLRAVAEKR 211

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>GLND_COLP3 (Q485H4) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 878

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 13/48 (27%), Positives = 27/48 (56%)
 Frame = -3

Query: 450 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 307
           R+++ + + DRPGLL ++ ++  +  + + S +  T G  A   F +S
Sbjct: 807 RTMIEIIALDRPGLLSNISQVFLEARVNIHSAKITTFGEKADDVFTIS 854

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>GLND_ERWCT (Q6D8E5) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 904

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = -3

Query: 450 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 337
           RS + + + D+PGLL  + +I +D+N+++      T G
Sbjct: 825 RSYMELSALDQPGLLARIGEIFSDLNLSLHGARISTIG 862

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>LON2_MYXXA (P36774) ATP-dependent protease La 2 (EC 3.4.21.53)|
          Length = 826

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -3

Query: 477 IEIYDDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAK 319
           IE+  + P  +  +VES   PG L DL+    D+ I  +    +T  L A+ K
Sbjct: 164 IELMPELPAAATELVESITHPGHLADLIAANVDVPIEEKQAVLETVDLKARMK 216

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>HLYB_ECO57 (Q46717) Alpha-hemolysin translocation ATP-binding protein hlyB|
           (EHEC-hlyB protein)
          Length = 706

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 11/21 (52%), Positives = 17/21 (80%)
 Frame = -1

Query: 239 GGRRQRMPVSRQMVTNPHFMI 177
           GG+RQR+ ++R +VTNP  +I
Sbjct: 608 GGQRQRIAIARALVTNPRILI 628

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>GLND_PSEPK (Q88MI2) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 900

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = -3

Query: 492 DIATHIEIYDDGPER-SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKF 316
           D    + I +D     ++L + + DRPGLL  L +I  + ++++Q+ +  T G   +  F
Sbjct: 799 DFPPQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVF 858

Query: 315 HVS 307
            ++
Sbjct: 859 FIT 861

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>RPOB_DEHE1 (Q3Z8V4) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1272

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -3

Query: 498 DVDIATHIEIYDDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGE 352
           D+DI    E+ D+ PER   +  S DR  L+ D +  + DI   ++ G+
Sbjct: 209 DLDILNLFEVIDNDPERH-YIQSSIDRDPLIKDEISALIDIYSRLRPGD 256

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>GLND_RHIME (P56884) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 949

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 13/47 (27%), Positives = 27/47 (57%)
 Frame = -3

Query: 447 SLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 307
           +++ VE  DR GLL ++  +++D+++ + S    T G      F+V+
Sbjct: 844 TVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVT 890

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>GLND_YERPS (Q667I7) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 893

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -3

Query: 450 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 337
           R+ L + + D+PGLL  + KI AD+ +++ S    T G
Sbjct: 817 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIG 854

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>GLND_YERPE (Q8ZH68) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 893

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -3

Query: 450 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 337
           R+ L + + D+PGLL  + KI AD+ +++ S    T G
Sbjct: 817 RTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIG 854

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>OPPF_STRP8 (Q8P2L5) Oligopeptide transport ATP-binding protein oppF|
          Length = 307

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 239 GGRRQRMPVSRQMVTNPHFMIVHD 168
           GG+RQR+ ++R +V NP F+I  +
Sbjct: 153 GGQRQRIGIARALVMNPEFVIADE 176

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>OPPF_STRP6 (Q5XDU4) Oligopeptide transport ATP-binding protein oppF|
          Length = 307

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 239 GGRRQRMPVSRQMVTNPHFMIVHD 168
           GG+RQR+ ++R +V NP F+I  +
Sbjct: 153 GGQRQRIGIARALVMNPEFVIADE 176

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>OPPF_STRP3 (P0A2V7) Oligopeptide transport ATP-binding protein oppF|
          Length = 307

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 239 GGRRQRMPVSRQMVTNPHFMIVHD 168
           GG+RQR+ ++R +V NP F+I  +
Sbjct: 153 GGQRQRIGIARALVMNPEFVIADE 176

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>OPPF_STRP1 (P0A2V6) Oligopeptide transport ATP-binding protein oppF|
          Length = 307

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 239 GGRRQRMPVSRQMVTNPHFMIVHD 168
           GG+RQR+ ++R +V NP F+I  +
Sbjct: 153 GGQRQRIGIARALVMNPEFVIADE 176

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>RPOB_DEHSC (Q3ZX01) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1273

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -3

Query: 498 DVDIATHIEIYDDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGE 352
           D+DI    E+ D+ PER   +  S DR  L+ D +  + DI   ++ G+
Sbjct: 209 DLDILNLFEVIDNDPERH-YIQSSIDRDPLIKDEISALIDIYSRLRPGD 256

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>GLND_VIBPA (Q87MD6) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 874

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -3

Query: 459 GPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKF 316
           G + +L+   + D PGLL  + +  AD+NI +   +  T G  A+  F
Sbjct: 795 GKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLF 842

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>GLND_PHOPR (Q6LN22) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
            uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 874

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = -3

Query: 453  ERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKF-HVSYRGKPLIKAL 277
            +++ + + + D PGLL  +  + A   +++Q+ +  T G  A+  F  V+  G PL +  
Sbjct: 799  KKTTMELIALDTPGLLARIGAVFAKQKVSLQAAKITTIGERAEDFFILVNEHGSPLTEEH 858

Query: 276  QQVLANSL 253
            QQ L  +L
Sbjct: 859  QQALKEAL 866

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>WAPA_BACSU (Q07833) Wall-associated protein precursor|
          Length = 2334

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -3

Query: 402  DLVKIIADINITVQSGEFDTEGLLAKAKFHVSYRGKPLIKALQ 274
            DL+K + D + TV S ++D+EG L K     S   KP+    Q
Sbjct: 1077 DLLKKVTDTDGTVTSYDYDSEGRLVKQYSANSTEAKPVFTEYQ 1119

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>GLND_SHISS (Q3Z5J1) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 890

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 450 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 337
           +S L + + D+PGLL  + KI AD+ I++      T G
Sbjct: 814 KSFLELIALDQPGLLARVGKIFADLGISLHGARITTIG 851

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>GLND_SHIFL (Q83MD4) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 890

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 450 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 337
           +S L + + D+PGLL  + KI AD+ I++      T G
Sbjct: 814 KSFLELIALDQPGLLARVGKIFADLGISLHGARITTIG 851

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>GLND_SHIBS (Q325X3) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 890

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 450 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 337
           +S L + + D+PGLL  + KI AD+ I++      T G
Sbjct: 814 KSFLELIALDQPGLLARVGKIFADLGISLHGARITTIG 851

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>GLND_ECOLI (P27249) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 890

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 450 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 337
           +S L + + D+PGLL  + KI AD+ I++      T G
Sbjct: 814 KSFLELIALDQPGLLARVGKIFADLGISLHGARITTIG 851

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>GLND_ECOL6 (Q8CY19) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 890

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 450 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 337
           +S L + + D+PGLL  + KI AD+ I++      T G
Sbjct: 814 KSFLELIALDQPGLLARVGKIFADLGISLHGARITTIG 851

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>GLND_ECO57 (Q8X8Y6) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 890

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 450 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 337
           +S L + + D+PGLL  + KI AD+ I++      T G
Sbjct: 814 KSFLELIALDQPGLLARVGKIFADLGISLHGARITTIG 851

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>GLND_SHIDS (Q32JU2) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 890

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 450 RSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEG 337
           +S L + + D+PGLL  + KI AD+ I++      T G
Sbjct: 814 KSFLDLIALDQPGLLARVGKIFADLGISLHGARITTIG 851

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>GLND_THIDA (Q3SKP1) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
            uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 850

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
 Frame = -3

Query: 486  ATHIEIYDDGPERSLLVVESADRPGLLVDLVKIIADINITVQSGEFDTEGLLAKAKFHVS 307
            A H+E  D G +  +L +  ADR GLL  + + +    I+V + + DT G   +  F + 
Sbjct: 770  AVHLEA-DRGGDGQVLSITCADRGGLLFAIAEELMRHEISVYAAKIDTLGERVEDTFLI- 827

Query: 306  YRGKPLIKALQQ-VLANSLR 250
             RG+ L    ++  L N LR
Sbjct: 828  -RGERLNAPPERAALENELR 846


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,004,524
Number of Sequences: 219361
Number of extensions: 1335376
Number of successful extensions: 3852
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 3738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3852
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result