ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags27m04 |
|---|---|
| Clone Library Name | barley_pub |
>CSN1_ARATH (P45432) COP9 signalosome complex subunit 1 (CSN complex subunit 1)| (Constitutive photomorphogenesis protein 11) (FUSCA protein 6) (FUSCA6) Length = 441 Score = 227 bits (578), Expect = 3e-59 Identities = 112/144 (77%), Positives = 127/144 (88%) Frame = -1 Query: 640 ELVHXVRELVNDFYASRYGSCLGYLEKLKSNLLLDMHLHEHIETLYKDIRHKAIIQYTFP 461 ELV VREL+NDFY+SRY SCL YL LKSNLLLD+HLH+H++TLY IR KA+IQYT P Sbjct: 290 ELVPDVRELINDFYSSRYASCLEYLASLKSNLLLDIHLHDHVDTLYDQIRKKALIQYTLP 349 Query: 460 FISVDLNLMAVAFQTSVSLLEKELAALITDNKIQARIDSHNKILYASHADQRNATFQRAL 281 F+SVDL+ MA AF+TSVS LEKEL ALITDN+IQARIDSHNKILYA HADQRNATFQ+ L Sbjct: 350 FVSVDLSRMADAFKTSVSGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQKVL 409 Query: 280 QTGNEFERDVKSMLLRANLLKHEY 209 Q GNEF+RDV++MLLRANLLKHEY Sbjct: 410 QMGNEFDRDVRAMLLRANLLKHEY 433
>CSN1_XENLA (Q6NRT5) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| Length = 487 Score = 154 bits (388), Expect = 3e-37 Identities = 75/143 (52%), Positives = 104/143 (72%) Frame = -1 Query: 640 ELVHXVRELVNDFYASRYGSCLGYLEKLKSNLLLDMHLHEHIETLYKDIRHKAIIQYTFP 461 EL VR+++ FY S+Y SCL L+++K NLLLDM+L H+ TLY IR++A+IQY P Sbjct: 317 ELEPQVRDIIFKFYESKYASCLKMLDEIKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSP 376 Query: 460 FISVDLNLMAVAFQTSVSLLEKELAALITDNKIQARIDSHNKILYASHADQRNATFQRAL 281 ++S D+ MA AF T+VS LE EL LI + I ARIDSH+KILYA DQR+ TF+++L Sbjct: 377 YVSADMYKMATAFNTTVSALEDELTQLILEGLINARIDSHSKILYARDVDQRSTTFEKSL 436 Query: 280 QTGNEFERDVKSMLLRANLLKHE 212 Q G EF+R K+M+LRA +L+++ Sbjct: 437 QMGREFQRRAKAMILRAAVLRNQ 459
>CSN1_MOUSE (Q99LD4) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| (SGN1) (JAB1-containing signalosome subunit 1) (G protein pathway suppressor 1) (GPS1 protein) Length = 471 Score = 151 bits (381), Expect = 2e-36 Identities = 73/143 (51%), Positives = 104/143 (72%) Frame = -1 Query: 640 ELVHXVRELVNDFYASRYGSCLGYLEKLKSNLLLDMHLHEHIETLYKDIRHKAIIQYTFP 461 EL VR+++ FY S+Y SCL L+++K NLLLDM+L H+ TLY IR++A+IQY P Sbjct: 301 ELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSP 360 Query: 460 FISVDLNLMAVAFQTSVSLLEKELAALITDNKIQARIDSHNKILYASHADQRNATFQRAL 281 ++S D++ MA AF T+V+ LE EL LI + I ARIDSH+KILYA DQR+ TF+++L Sbjct: 361 YVSADMHKMAAAFNTTVAALEDELTQLILEGLINARIDSHSKILYARDVDQRSTTFEKSL 420 Query: 280 QTGNEFERDVKSMLLRANLLKHE 212 G EF+R K+M+LRA +L+++ Sbjct: 421 LMGKEFQRRAKAMILRAAVLRNQ 443
>CSN1_HUMAN (Q13098) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| (SGN1) (JAB1-containing signalosome subunit 1) (G protein pathway suppressor 1) (GPS1 protein) (MFH protein) Length = 471 Score = 150 bits (380), Expect = 2e-36 Identities = 72/143 (50%), Positives = 104/143 (72%) Frame = -1 Query: 640 ELVHXVRELVNDFYASRYGSCLGYLEKLKSNLLLDMHLHEHIETLYKDIRHKAIIQYTFP 461 EL VR+++ FY S+Y SCL L+++K NLLLDM+L H+ TLY IR++A+IQY P Sbjct: 301 ELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSP 360 Query: 460 FISVDLNLMAVAFQTSVSLLEKELAALITDNKIQARIDSHNKILYASHADQRNATFQRAL 281 ++S D++ MA AF T+V+ LE EL LI + I AR+DSH+KILYA DQR+ TF+++L Sbjct: 361 YVSADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSL 420 Query: 280 QTGNEFERDVKSMLLRANLLKHE 212 G EF+R K+M+LRA +L+++ Sbjct: 421 LMGKEFQRRAKAMMLRAAVLRNQ 443
>CSN1_RAT (P97834) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| (SGN1) (JAB1-containing signalosome subunit 1) (G protein pathway suppressor 1) (MFH protein) Length = 471 Score = 150 bits (378), Expect = 4e-36 Identities = 72/143 (50%), Positives = 104/143 (72%) Frame = -1 Query: 640 ELVHXVRELVNDFYASRYGSCLGYLEKLKSNLLLDMHLHEHIETLYKDIRHKAIIQYTFP 461 EL VR+++ FY S+Y SCL L+++K NLLLDM+L H+ TLY IR++A+IQY P Sbjct: 301 ELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSP 360 Query: 460 FISVDLNLMAVAFQTSVSLLEKELAALITDNKIQARIDSHNKILYASHADQRNATFQRAL 281 ++S D++ MA AF T+V+ LE EL +I + I ARIDSH+KILYA DQR+ TF+++L Sbjct: 361 YVSADMHKMAAAFNTTVAALEDELTQVILEGLINARIDSHSKILYARDVDQRSTTFEKSL 420 Query: 280 QTGNEFERDVKSMLLRANLLKHE 212 G EF+R K+M+LRA +L+++ Sbjct: 421 LMGKEFQRRAKAMILRAAVLRNQ 443
>CSN1_DROME (Q9VVU5) COP9 signalosome complex subunit 1b (Signalosome subunit| 1b) (Dch1-2) Length = 525 Score = 149 bits (376), Expect = 7e-36 Identities = 71/141 (50%), Positives = 105/141 (74%) Frame = -1 Query: 640 ELVHXVRELVNDFYASRYGSCLGYLEKLKSNLLLDMHLHEHIETLYKDIRHKAIIQYTFP 461 EL +R+++ FY S+Y SCL L++++ NLL+DM++ H+ TLY IR++A+IQY P Sbjct: 350 ELEPQLRDIIFKFYESKYASCLTLLDEIRDNLLVDMYIAPHVTTLYTKIRNRALIQYFSP 409 Query: 460 FISVDLNLMAVAFQTSVSLLEKELAALITDNKIQARIDSHNKILYASHADQRNATFQRAL 281 ++S D++ MA+AF +SV LE E+ LI D +IQARIDSHNKIL+A ADQRN+TF+RAL Sbjct: 410 YMSADMHKMAMAFNSSVGDLENEVMQLILDGQIQARIDSHNKILFAKEADQRNSTFERAL 469 Query: 280 QTGNEFERDVKSMLLRANLLK 218 G +++R + ++LRA +LK Sbjct: 470 IMGKQYQRHTRMLVLRAAMLK 490
>CSN1_CAEEL (Q9GS00) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| Length = 601 Score = 67.8 bits (164), Expect = 3e-11 Identities = 37/132 (28%), Positives = 66/132 (50%) Frame = -1 Query: 619 ELVNDFYASRYGSCLGYLEKLKSNLLLDMHLHEHIETLYKDIRHKAIIQYTFPFISVDLN 440 EL+ + +SR+G C + +K LLLD + +++ L++ IR K ++QY P+ ++ + Sbjct: 397 ELLGSYTSSRFGRCFEIMRSVKPRLLLDPFISRNVDELFEKIRQKCVLQYLQPYSTIKMA 456 Query: 439 LMAVAFQTSVSLLEKELAALITDNKIQARIDSHNKILYASHADQRNATFQRALQTGNEFE 260 MA A S + L+ L LI + +ID + I+ NA +R T + Sbjct: 457 TMAEAVGMSSAELQLSLLELIEQKHVSLKIDQNEGIVRILDERDENAILKRVNVTCDRAT 516 Query: 259 RDVKSMLLRANL 224 + KS+L + L Sbjct: 517 QKAKSLLWKTTL 528
>PSD6_CAEEL (Q20585) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit rpn-7) Length = 410 Score = 63.9 bits (154), Expect = 4e-10 Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 1/120 (0%) Frame = -1 Query: 625 VRELVNDFYASRYGSCLGYLEKLKSNLL-LDMHLHEHIETLYKDIRHKAIIQYTFPFISV 449 VRE + +Y Y L L+S D +L H + +RH+A Q+ P+ +V Sbjct: 276 VREYLESYYDCHYDRFFIQLAALESERFKFDRYLSPHFNYYSRGMRHRAYEQFLTPYKTV 335 Query: 448 DLNLMAVAFQTSVSLLEKELAALITDNKIQARIDSHNKILYASHADQRNATFQRALQTGN 269 +++MA F S + +++EL LI ++Q RID+ N ++ +H D +N ++ ++ G+ Sbjct: 336 RIDMMAKDFGVSRAFIDRELHRLIATGQLQCRIDAVNGVIEVNHRDSKNHLYKAVIKDGD 395
>CSN1_BRAOL (P68352) COP9 signalosome complex subunit 1 (CSN complex subunit 1)| (Constitutive photomorphogenesis protein 11) (FUSCA protein 6) (FUSCA6) (Fragment) Length = 37 Score = 63.9 bits (154), Expect = 4e-10 Identities = 30/34 (88%), Positives = 32/34 (94%) Frame = -1 Query: 388 AALITDNKIQARIDSHNKILYASHADQRNATFQR 287 A LITDN+IQARIDSHNKILYA HADQRNATFQ+ Sbjct: 4 ALLITDNQIQARIDSHNKILYARHADQRNATFQK 37
>PSD6_ORYSA (Q8W425) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory particle non-ATPase subunit 7) (OsRPN7) Length = 389 Score = 58.9 bits (141), Expect = 1e-08 Identities = 33/122 (27%), Positives = 56/122 (45%) Frame = -1 Query: 634 VHXVRELVNDFYASRYGSCLGYLEKLKSNLLLDMHLHEHIETLYKDIRHKAIIQYTFPFI 455 V + E +N Y +Y S L + LD +L H +++R Q+ + Sbjct: 253 VPHLSEFLNSLYNCQYKSFFAAFSGLTEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYK 312 Query: 454 SVDLNLMAVAFQTSVSLLEKELAALITDNKIQARIDSHNKILYASHADQRNATFQRALQT 275 SV + MA AF +V ++ EL+ I K+ +ID +L + D RNA +Q ++ Sbjct: 313 SVTMEAMASAFGVTVDFIDLELSRFIAAGKLHCKIDKVACVLETNRPDARNAFYQATIKQ 372 Query: 274 GN 269 G+ Sbjct: 373 GD 374
>PSD6_ARATH (Q93Y35) Probable 26S proteasome non-ATPase regulatory subunit 6| Length = 387 Score = 56.2 bits (134), Expect = 8e-08 Identities = 29/117 (24%), Positives = 55/117 (47%) Frame = -1 Query: 619 ELVNDFYASRYGSCLGYLEKLKSNLLLDMHLHEHIETLYKDIRHKAIIQYTFPFISVDLN 440 E +N Y +Y + + + D +L+ H +++R Q+ + SV + Sbjct: 256 EFLNSLYECQYKAFFSAFAGMAVQIKYDRYLYPHFRFYMREVRTVVYSQFLESYKSVTVE 315 Query: 439 LMAVAFQTSVSLLEKELAALITDNKIQARIDSHNKILYASHADQRNATFQRALQTGN 269 MA AF SV +++EL+ I K+ +ID +L + D +NA +Q ++ G+ Sbjct: 316 AMAKAFGVSVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQATIKQGD 372
>CSN2_DROME (Q94899) COP9 signalosome complex subunit 2 (Signalosome subunit 2)| (Dch2) (Alien protein) Length = 444 Score = 52.0 bits (123), Expect = 1e-06 Identities = 29/119 (24%), Positives = 59/119 (49%) Frame = -1 Query: 616 LVNDFYASRYGSCLGYLEKLKSNLLLDMHLHEHIETLYKDIRHKAIIQYTFPFISVDLNL 437 LVN + + L + +SN++ D + EHIE L ++IR + +I+ P+ ++ + Sbjct: 315 LVNSYQNNDINEFETILRQHRSNIMADQFIREHIEDLLRNIRTQVLIKLIRPYKNIAIPF 374 Query: 436 MAVAFQTSVSLLEKELAALITDNKIQARIDSHNKILYASHADQRNATFQRALQTGNEFE 260 +A A + +E L + I D+ I+ RID N++L + + + + N+ + Sbjct: 375 IANALNIEPAEVESLLVSCILDDTIKGRIDQVNQVLQLDKINSSASRYNALEKWSNQIQ 433
>CSN2_XENLA (Q6IR75) COP9 signalosome complex subunit 2 (Signalosome subunit 2)| (Fragment) Length = 441 Score = 49.7 bits (117), Expect = 7e-06 Identities = 26/87 (29%), Positives = 45/87 (51%) Frame = -1 Query: 553 SNLLLDMHLHEHIETLYKDIRHKAIIQYTFPFISVDLNLMAVAFQTSVSLLEKELAALIT 374 SN++ D + EHIE L ++IR + +I+ P+ + + ++ V+ +E L I Sbjct: 333 SNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCIL 392 Query: 373 DNKIQARIDSHNKILYASHADQRNATF 293 DN I RID N++L H + A + Sbjct: 393 DNTIHGRIDQVNQLLELDHQKRGGARY 419
>CSN2_RAT (P61203) COP9 signalosome complex subunit 2 (Signalosome subunit 2)| (SGN2) (JAB1-containing signalosome subunit 2) (Thyroid receptor-interacting protein 15) (Alien homolog) Length = 443 Score = 49.7 bits (117), Expect = 7e-06 Identities = 26/87 (29%), Positives = 45/87 (51%) Frame = -1 Query: 553 SNLLLDMHLHEHIETLYKDIRHKAIIQYTFPFISVDLNLMAVAFQTSVSLLEKELAALIT 374 SN++ D + EHIE L ++IR + +I+ P+ + + ++ V+ +E L I Sbjct: 335 SNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCIL 394 Query: 373 DNKIQARIDSHNKILYASHADQRNATF 293 DN I RID N++L H + A + Sbjct: 395 DNTIHGRIDQVNQLLELDHQKRGGARY 421
>CSN2_MOUSE (P61202) COP9 signalosome complex subunit 2 (Signalosome subunit 2)| (SGN2) (JAB1-containing signalosome subunit 2) (Thyroid receptor-interacting protein 15) (Alien homolog) Length = 443 Score = 49.7 bits (117), Expect = 7e-06 Identities = 26/87 (29%), Positives = 45/87 (51%) Frame = -1 Query: 553 SNLLLDMHLHEHIETLYKDIRHKAIIQYTFPFISVDLNLMAVAFQTSVSLLEKELAALIT 374 SN++ D + EHIE L ++IR + +I+ P+ + + ++ V+ +E L I Sbjct: 335 SNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCIL 394 Query: 373 DNKIQARIDSHNKILYASHADQRNATF 293 DN I RID N++L H + A + Sbjct: 395 DNTIHGRIDQVNQLLELDHQKRGGARY 421
>CSN2_HUMAN (P61201) COP9 signalosome complex subunit 2 (Signalosome subunit 2)| (SGN2) (JAB1-containing signalosome subunit 2) (Thyroid receptor-interacting protein 15) (Alien homolog) Length = 443 Score = 49.7 bits (117), Expect = 7e-06 Identities = 26/87 (29%), Positives = 45/87 (51%) Frame = -1 Query: 553 SNLLLDMHLHEHIETLYKDIRHKAIIQYTFPFISVDLNLMAVAFQTSVSLLEKELAALIT 374 SN++ D + EHIE L ++IR + +I+ P+ + + ++ V+ +E L I Sbjct: 335 SNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCIL 394 Query: 373 DNKIQARIDSHNKILYASHADQRNATF 293 DN I RID N++L H + A + Sbjct: 395 DNTIHGRIDQVNQLLELDHQKRGGARY 421
>CSN2_BRARE (Q6IQT4) COP9 signalosome complex subunit 2 (Signalosome subunit 2)| Length = 443 Score = 49.7 bits (117), Expect = 7e-06 Identities = 26/87 (29%), Positives = 45/87 (51%) Frame = -1 Query: 553 SNLLLDMHLHEHIETLYKDIRHKAIIQYTFPFISVDLNLMAVAFQTSVSLLEKELAALIT 374 SN++ D + EHIE L ++IR + +I+ P+ + + ++ V+ +E L I Sbjct: 335 SNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCIL 394 Query: 373 DNKIQARIDSHNKILYASHADQRNATF 293 DN I RID N++L H + A + Sbjct: 395 DNTINGRIDQVNQLLELDHQKRGGARY 421
>CSN1_SCHPO (O94308) COP9 signalosome complex subunit 1 (CSN complex subunit 1)| (SGN1) Length = 422 Score = 49.7 bits (117), Expect = 7e-06 Identities = 24/89 (26%), Positives = 47/89 (52%) Frame = -1 Query: 592 RYGSCLGYLEKLKSNLLLDMHLHEHIETLYKDIRHKAIIQYTFPFISVDLNLMAVAFQTS 413 +Y L L++ + LDM+L + L+ IR ++++ Y P+ ++ + +AV F Sbjct: 275 KYSLLLDTLQQNAQDYSLDMYLAPQLTNLFSLIRERSLLDYLIPYSALPFSKIAVDFHID 334 Query: 412 VSLLEKELAALITDNKIQARIDSHNKILY 326 + +EK L +I K+ ++DS K +Y Sbjct: 335 ENFIEKNLLEIIEAKKLNGKVDSLQKRVY 363
>C71AF_ARATH (P58046) Cytochrome P450 71A15 (EC 1.14.-.-)| Length = 496 Score = 32.3 bits (72), Expect = 1.2 Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 31/149 (20%) Frame = -1 Query: 634 VHXVRELVNDFYASRYGSCLGYLEKLKS------------NLLLDMHLHEHIETLYKDIR 491 V + ELV F S Y CL ++++++ L+D + EH++ K + Sbjct: 205 VRKITELVGGFPVSEYIPCLAWIDQIRGLYNRAEEVSKIFGDLMDKVVQEHLDATNKPTK 264 Query: 490 HKAIIQYTFPFISVD-------------LNLMAVAFQTSVSLLEKELAALITD----NKI 362 I +F S D L++ T+ SLLE + LI K+ Sbjct: 265 DFVDILLSFERQSKDGIEVRRSDIKFIILDIFLGGTTTTNSLLEWTMTELIRHPECMKKL 324 Query: 361 QARI--DSHNKILYASHADQRNATFQRAL 281 Q I D+ N +Y SH + + + +A+ Sbjct: 325 QDEIRGDATNLTIYRSHEEVEDMKYLKAV 353
>RPOA_DEHE1 (Q3Z953) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (RNAP| alpha subunit) (Transcriptase alpha chain) (RNA polymerase alpha subunit) Length = 330 Score = 32.0 bits (71), Expect = 1.6 Identities = 14/49 (28%), Positives = 27/49 (55%) Frame = -1 Query: 433 AVAFQTSVSLLEKELAALITDNKIQARIDSHNKILYASHADQRNATFQR 287 A A S +L K+ AAL++ NK+ A +++ + YA ++ N ++ Sbjct: 204 ATAVSRSADILVKQFAALVSHNKVVAEVEASEPVKYAIPEEKYNMPIEQ 252
>EX5B_BUCBP (Q89AB3) Exodeoxyribonuclease V beta chain (EC 3.1.11.5)| Length = 1180 Score = 32.0 bits (71), Expect = 1.6 Identities = 19/73 (26%), Positives = 37/73 (50%) Frame = -1 Query: 568 LEKLKSNLLLDMHLHEHIETLYKDIRHKAIIQYTFPFISVDLNLMAVAFQTSVSLLEKEL 389 L K S L+L + +H LY I K +Y F F+S+D+ + + + + L KE+ Sbjct: 140 LNKFNSELMLQNKILKHTYPLYLKISIK-FWKYYFAFLSLDITSILLEYFNNPKTLLKEI 198 Query: 388 AALITDNKIQARI 350 L+ ++ +++ Sbjct: 199 LPLLNKTQLISKL 211
>BLM10_YEAST (P43583) Proteasome activator BLM10 (Bleomycin resistance protein| BLM10) Length = 2143 Score = 31.6 bits (70), Expect = 2.1 Identities = 17/109 (15%), Positives = 49/109 (44%), Gaps = 2/109 (1%) Frame = -1 Query: 580 CLGYLEKLKSNLLLDMHLHEHIETLYKDIRHKAI-IQYTFPFISVDLNLMAVAFQTSVSL 404 C + +N+ +D H+++ + ++ KD+ +K + ++ + V+ + ++ Sbjct: 411 CYSIWSSVSANVAIDTHMYDFVGSISKDVHNKILSSEHEKDVVGVEFGEFGIFTDDQMTF 470 Query: 403 LEKELAA-LITDNKIQARIDSHNKILYASHADQRNATFQRALQTGNEFE 260 + L L TD +I + + +YA + +++ F++ + E Sbjct: 471 MFNRLQGHLRTDGQIHSYSRTVKPFVYAINGSKKDRFFEKLVSLAKAIE 519
>R51A1_MOUSE (Q8C551) RAD51-associated protein 1 (RAD51-interacting protein)| (RAB22) Length = 337 Score = 31.2 bits (69), Expect = 2.7 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 12/81 (14%) Frame = -3 Query: 365 DTGSHRLAQQDF-VRKSRRSKKRNL---PAGTADGQRV*ERCQVHASEGEPSQARV---- 210 D + + +DF VR+S+ SKK+ + PAG ++ +C+ + +P+ A + Sbjct: 195 DFDESKESDEDFGVRRSKESKKKTVQKKPAGEKKERKSKPKCEASVTSVDPAPAAIKSGS 254 Query: 209 ----QSEGSRKEAVRKSSAEC 159 Q+ G EA RK + C Sbjct: 255 PSLPQAVGLPSEATRKPAIMC 275
>DRL8_ARATH (Q8W3K3) Putative disease resistance protein At1g58400| Length = 910 Score = 30.0 bits (66), Expect = 6.1 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -3 Query: 497 HSPQSHHSVHIPIHIC*SQLDGCCLPDLCVPVRERV 390 + P+ H P H+ LDGCCL + +P+ E++ Sbjct: 763 YMPKLPDEQHFPSHLTSISLDGCCLVEDPLPILEKL 798
>MUTB_PORGI (Q59677) Methylmalonyl-CoA mutase large subunit (EC 5.4.99.2)| (MCM-alpha) Length = 715 Score = 30.0 bits (66), Expect = 6.1 Identities = 22/64 (34%), Positives = 35/64 (54%) Frame = -1 Query: 520 HIETLYKDIRHKAIIQYTFPFISVDLNLMAVAFQTSVSLLEKELAALITDNKIQARIDSH 341 ++E+L ++ HKA +T ++ MA A +T + L E AA T QARIDSH Sbjct: 403 YVESLTNELVHKA---WTLIKEVQEMGGMAKAIETGLPKLRIEEAAART----QARIDSH 455 Query: 340 NKIL 329 +++ Sbjct: 456 QQVI 459
>CHLN_PINCO (P26180) Light-independent protochlorophyllide reductase subunit N| (EC 1.18.-.-) (LI-POR subunit N) (DPOR subunit N) Length = 459 Score = 29.6 bits (65), Expect = 7.9 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = +2 Query: 278 LQCPLEGCVSLIGVTCVQNLVVRVYASLYLVIGDKRCQLFL 400 L+C S ++CV L ++ S +LV+G K C FL Sbjct: 11 LECETGNYHSFCPISCVSWLYQKIEDSFFLVVGTKTCGYFL 51
>RAD50_SULAC (O33600) DNA double-strand break repair rad50 ATPase| Length = 886 Score = 29.6 bits (65), Expect = 7.9 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 1/88 (1%) Frame = -1 Query: 499 DIRHKAIIQYTFPFISVDLNLMAVAFQTSVSLLEKELAAL-ITDNKIQARIDSHNKILYA 323 D HKA I+ ++LN A Q ++ L KE L T NK+Q + +K Sbjct: 445 DSEHKAKIREEIKVQLLELNKQITALQARINSLIKEREELEATRNKLQLELQKRSKEKGI 504 Query: 322 SHADQRNATFQRALQTGNEFERDVKSML 239 A + QR + N+ + ++ S+L Sbjct: 505 YEAKLKE--LQRLEEEKNKLQNEILSLL 530
>CHLN_PINTH (P41646) Light-independent protochlorophyllide reductase subunit N| (EC 1.18.-.-) (LI-POR subunit N) (DPOR subunit N) Length = 467 Score = 29.6 bits (65), Expect = 7.9 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = +2 Query: 278 LQCPLEGCVSLIGVTCVQNLVVRVYASLYLVIGDKRCQLFL 400 L+C S ++CV L ++ S +LV+G K C FL Sbjct: 11 LECETGNYHSFCPISCVSWLYQKIEDSFFLVVGTKTCGYFL 51 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,266,039 Number of Sequences: 219361 Number of extensions: 1563064 Number of successful extensions: 3948 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 3769 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3948 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
