ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags28a23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103755.1| Zea mays PCO153089 mRNA sequence Length = 916 Score = 351 bits (177), Expect = 1e-93 Identities = 272/304 (89%) Strand = Plus / Minus Query: 129 cttgacctggtccagcacggggccgcagagcgatacgccgtcggtgaccttggtgtggta 188 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 720 cttgacctggtccagcacggggccgcagagcgagacgccgtcggtgaccttggtgtggta 661 Query: 189 gtaggagctgtagaaggtgaccctggtgcgtgcgccggcggcgacgaacctgaggctcga 248 |||||||||||||||||||| | |||||| ||||| |||| |||||||||| || Sbjct: 660 gtaggagctgtagaaggtgaggcgggtgcggacgccgccggccacgaacctgaacgccgc 601 Query: 249 cgccttgaacccgcccttgcccgtggactcgaacggcactttctgcgtcacgttggcggc 308 || |||||||||||| || |||||||| ||||||||||| |||||||| |||||| | || Sbjct: 600 cgtcttgaacccgcctttccccgtggaatcgaacggcaccttctgcgtgacgttgcccgc 541 Query: 309 gaaggcctccacgagcatggagccgtggcagccgttcttggcgtcgccgacgacgtagga 368 ||| |||||||| ||||| |||||||||||||||||| ||||||||||||| || | || Sbjct: 540 gaacgcctccaccagcatagagccgtggcagccgttccgggcgtcgccgacggcgaacga 481 Query: 369 gaggttgtaggcgcggttgggcacggtgcggatgacctgcgcgatggcgctctnccgccc 428 |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 480 caggttgtaggcgcggttgggaacggtgcggatgacctgcgcgatggcgctctcccgccc 421 Query: 429 ggcc 432 |||| Sbjct: 420 ggcc 417
>ref|XM_470036.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1474 Score = 327 bits (165), Expect = 2e-86 Identities = 261/293 (89%) Strand = Plus / Minus Query: 129 cttgacctggtccagcacggggccgcagagcgatacgccgtcggtgaccttggtgtggta 188 ||||||||| ||||||||||||||||| ||||| ||||||||| | |||||||||||||| Sbjct: 1246 cttgacctgatccagcacggggccgcacagcgagacgccgtcgctcaccttggtgtggta 1187 Query: 189 gtaggagctgtagaaggtgaccctggtgcgtgcgccggcggcgacgaacctgaggctcga 248 ||| |||||||||||||| ||||||||||| |||||||||||||||||| || ||||| Sbjct: 1186 gtacgagctgtagaaggtcaccctggtgcgcacgccggcggcgacgaaccggaagctcgc 1127 Query: 249 cgccttgaacccgcccttgcccgtggactcgaacggcactttctgcgtcacgttggcggc 308 || |||||||||||| || || ||||||||||||||| |||||||||||||| |||| Sbjct: 1126 cggcttgaacccgccgtttccgacggactcgaacggcaccttctgcgtcacgttcccggc 1067 Query: 309 gaaggcctccacgagcatggagccgtggcagccgttcttggcgtcgccgacgacgtagga 368 ||| |||||||| ||||| || ||||||||||||||||||||||||||||||||| | || Sbjct: 1066 gaacgcctccaccagcatcgacccgtggcagccgttcttggcgtcgccgacgacgaacga 1007 Query: 369 gaggttgtaggcgcggttgggcacggtgcggatgacctgcgcgatggcgctct 421 ||||||||||||||||| | ||| |||||||| ||||||||||||||||||| Sbjct: 1006 taggttgtaggcgcggttcgccaccgtgcggatcacctgcgcgatggcgctct 954
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 327 bits (165), Expect = 2e-86 Identities = 261/293 (89%) Strand = Plus / Minus Query: 129 cttgacctggtccagcacggggccgcagagcgatacgccgtcggtgaccttggtgtggta 188 ||||||||| ||||||||||||||||| ||||| ||||||||| | |||||||||||||| Sbjct: 33463625 cttgacctgatccagcacggggccgcacagcgagacgccgtcgctcaccttggtgtggta 33463566 Query: 189 gtaggagctgtagaaggtgaccctggtgcgtgcgccggcggcgacgaacctgaggctcga 248 ||| |||||||||||||| ||||||||||| |||||||||||||||||| || ||||| Sbjct: 33463565 gtacgagctgtagaaggtcaccctggtgcgcacgccggcggcgacgaaccggaagctcgc 33463506 Query: 249 cgccttgaacccgcccttgcccgtggactcgaacggcactttctgcgtcacgttggcggc 308 || |||||||||||| || || ||||||||||||||| |||||||||||||| |||| Sbjct: 33463505 cggcttgaacccgccgtttccgacggactcgaacggcaccttctgcgtcacgttcccggc 33463446 Query: 309 gaaggcctccacgagcatggagccgtggcagccgttcttggcgtcgccgacgacgtagga 368 ||| |||||||| ||||| || ||||||||||||||||||||||||||||||||| | || Sbjct: 33463445 gaacgcctccaccagcatcgacccgtggcagccgttcttggcgtcgccgacgacgaacga 33463386 Query: 369 gaggttgtaggcgcggttgggcacggtgcggatgacctgcgcgatggcgctct 421 ||||||||||||||||| | ||| |||||||| ||||||||||||||||||| Sbjct: 33463385 taggttgtaggcgcggttcgccaccgtgcggatcacctgcgcgatggcgctct 33463333
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 327 bits (165), Expect = 2e-86 Identities = 261/293 (89%) Strand = Plus / Plus Query: 129 cttgacctggtccagcacggggccgcagagcgatacgccgtcggtgaccttggtgtggta 188 ||||||||| ||||||||||||||||| ||||| ||||||||| | |||||||||||||| Sbjct: 34486 cttgacctgatccagcacggggccgcacagcgagacgccgtcgctcaccttggtgtggta 34545 Query: 189 gtaggagctgtagaaggtgaccctggtgcgtgcgccggcggcgacgaacctgaggctcga 248 ||| |||||||||||||| ||||||||||| |||||||||||||||||| || ||||| Sbjct: 34546 gtacgagctgtagaaggtcaccctggtgcgcacgccggcggcgacgaaccggaagctcgc 34605 Query: 249 cgccttgaacccgcccttgcccgtggactcgaacggcactttctgcgtcacgttggcggc 308 || |||||||||||| || || ||||||||||||||| |||||||||||||| |||| Sbjct: 34606 cggcttgaacccgccgtttccgacggactcgaacggcaccttctgcgtcacgttcccggc 34665 Query: 309 gaaggcctccacgagcatggagccgtggcagccgttcttggcgtcgccgacgacgtagga 368 ||| |||||||| ||||| || ||||||||||||||||||||||||||||||||| | || Sbjct: 34666 gaacgcctccaccagcatcgacccgtggcagccgttcttggcgtcgccgacgacgaacga 34725 Query: 369 gaggttgtaggcgcggttgggcacggtgcggatgacctgcgcgatggcgctct 421 ||||||||||||||||| | ||| |||||||| ||||||||||||||||||| Sbjct: 34726 taggttgtaggcgcggttcgccaccgtgcggatcacctgcgcgatggcgctct 34778
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 327 bits (165), Expect = 2e-86 Identities = 261/293 (89%) Strand = Plus / Minus Query: 129 cttgacctggtccagcacggggccgcagagcgatacgccgtcggtgaccttggtgtggta 188 ||||||||| ||||||||||||||||| ||||| ||||||||| | |||||||||||||| Sbjct: 33554135 cttgacctgatccagcacggggccgcacagcgagacgccgtcgctcaccttggtgtggta 33554076 Query: 189 gtaggagctgtagaaggtgaccctggtgcgtgcgccggcggcgacgaacctgaggctcga 248 ||| |||||||||||||| ||||||||||| |||||||||||||||||| || ||||| Sbjct: 33554075 gtacgagctgtagaaggtcaccctggtgcgcacgccggcggcgacgaaccggaagctcgc 33554016 Query: 249 cgccttgaacccgcccttgcccgtggactcgaacggcactttctgcgtcacgttggcggc 308 || |||||||||||| || || ||||||||||||||| |||||||||||||| |||| Sbjct: 33554015 cggcttgaacccgccgtttccgacggactcgaacggcaccttctgcgtcacgttcccggc 33553956 Query: 309 gaaggcctccacgagcatggagccgtggcagccgttcttggcgtcgccgacgacgtagga 368 ||| |||||||| ||||| || ||||||||||||||||||||||||||||||||| | || Sbjct: 33553955 gaacgcctccaccagcatcgacccgtggcagccgttcttggcgtcgccgacgacgaacga 33553896 Query: 369 gaggttgtaggcgcggttgggcacggtgcggatgacctgcgcgatggcgctct 421 ||||||||||||||||| | ||| |||||||| ||||||||||||||||||| Sbjct: 33553895 taggttgtaggcgcggttcgccaccgtgcggatcacctgcgcgatggcgctct 33553843
>dbj|AK121037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050P15, full insert sequence Length = 1182 Score = 327 bits (165), Expect = 2e-86 Identities = 261/293 (89%) Strand = Plus / Minus Query: 129 cttgacctggtccagcacggggccgcagagcgatacgccgtcggtgaccttggtgtggta 188 ||||||||| ||||||||||||||||| ||||| ||||||||| | |||||||||||||| Sbjct: 1031 cttgacctgatccagcacggggccgcacagcgagacgccgtcgctcaccttggtgtggta 972 Query: 189 gtaggagctgtagaaggtgaccctggtgcgtgcgccggcggcgacgaacctgaggctcga 248 ||| |||||||||||||| ||||||||||| |||||||||||||||||| || ||||| Sbjct: 971 gtacgagctgtagaaggtcaccctggtgcgcacgccggcggcgacgaaccggaagctcgc 912 Query: 249 cgccttgaacccgcccttgcccgtggactcgaacggcactttctgcgtcacgttggcggc 308 || |||||||||||| || || ||||||||||||||| |||||||||||||| |||| Sbjct: 911 cggcttgaacccgccgtttccgacggactcgaacggcaccttctgcgtcacgttcccggc 852 Query: 309 gaaggcctccacgagcatggagccgtggcagccgttcttggcgtcgccgacgacgtagga 368 ||| |||||||| ||||| || ||||||||||||||||||||||||||||||||| | || Sbjct: 851 gaacgcctccaccagcatcgacccgtggcagccgttcttggcgtcgccgacgacgaacga 792 Query: 369 gaggttgtaggcgcggttgggcacggtgcggatgacctgcgcgatggcgctct 421 ||||||||||||||||| | ||| |||||||| ||||||||||||||||||| Sbjct: 791 taggttgtaggcgcggttcgccaccgtgcggatcacctgcgcgatggcgctct 739
>dbj|AK059286.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-D10, full insert sequence Length = 1396 Score = 327 bits (165), Expect = 2e-86 Identities = 261/293 (89%) Strand = Plus / Minus Query: 129 cttgacctggtccagcacggggccgcagagcgatacgccgtcggtgaccttggtgtggta 188 ||||||||| ||||||||||||||||| ||||| ||||||||| | |||||||||||||| Sbjct: 1245 cttgacctgatccagcacggggccgcacagcgagacgccgtcgctcaccttggtgtggta 1186 Query: 189 gtaggagctgtagaaggtgaccctggtgcgtgcgccggcggcgacgaacctgaggctcga 248 ||| |||||||||||||| ||||||||||| |||||||||||||||||| || ||||| Sbjct: 1185 gtacgagctgtagaaggtcaccctggtgcgcacgccggcggcgacgaaccggaagctcgc 1126 Query: 249 cgccttgaacccgcccttgcccgtggactcgaacggcactttctgcgtcacgttggcggc 308 || |||||||||||| || || ||||||||||||||| |||||||||||||| |||| Sbjct: 1125 cggcttgaacccgccgtttccgacggactcgaacggcaccttctgcgtcacgttcccggc 1066 Query: 309 gaaggcctccacgagcatggagccgtggcagccgttcttggcgtcgccgacgacgtagga 368 ||| |||||||| ||||| || ||||||||||||||||||||||||||||||||| | || Sbjct: 1065 gaacgcctccaccagcatcgacccgtggcagccgttcttggcgtcgccgacgacgaacga 1006 Query: 369 gaggttgtaggcgcggttgggcacggtgcggatgacctgcgcgatggcgctct 421 ||||||||||||||||| | ||| |||||||| ||||||||||||||||||| Sbjct: 1005 taggttgtaggcgcggttcgccaccgtgcggatcacctgcgcgatggcgctct 953
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 69.9 bits (35), Expect = 6e-09 Identities = 91/110 (82%) Strand = Plus / Minus Query: 322 agcatggagccgtggcagccgttcttggcgtcgccgacgacgtaggagaggttgtaggcg 381 ||||||| ||| | |||||||| | |||||||||||||| || ||||||||||||| | | Sbjct: 5803087 agcatggcgccctcgcagccgtccctggcgtcgccgacggcgaaggagaggttgtacgag 5803028 Query: 382 cggttgggcacggtgcggatgacctgcgcgatggcgctctnccgcccggc 431 ||| || |||||||||| |||||||||| |||| || ||||||||| Sbjct: 5803027 cggcccggtgcggtgcggatcacctgcgcgaccgcgccctcccgcccggc 5802978 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 133 acctggtccagcacggggccgcagagcgatacgccgtcggtgaccttggtgtggtagtag 192 |||||||||||||| || ||||| |||| ||||||||| | | |||||||||||||| Sbjct: 5803306 acctggtccagcaccggcccgcacggcgacacgccgtcgccggcgctggtgtggtagtag 5803247 Query: 193 gagctgtagaaggtgaccctgg 214 ||||||||||| || ||||||| Sbjct: 5803246 gagctgtagaacgtcaccctgg 5803225
>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_B04 Length = 151721 Score = 69.9 bits (35), Expect = 6e-09 Identities = 91/110 (82%) Strand = Plus / Minus Query: 322 agcatggagccgtggcagccgttcttggcgtcgccgacgacgtaggagaggttgtaggcg 381 ||||||| ||| | |||||||| | |||||||||||||| || ||||||||||||| | | Sbjct: 110115 agcatggcgccctcgcagccgtccctggcgtcgccgacggcgaaggagaggttgtacgag 110056 Query: 382 cggttgggcacggtgcggatgacctgcgcgatggcgctctnccgcccggc 431 ||| || |||||||||| |||||||||| |||| || ||||||||| Sbjct: 110055 cggcccggtgcggtgcggatcacctgcgcgaccgcgccctcccgcccggc 110006 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 133 acctggtccagcacggggccgcagagcgatacgccgtcggtgaccttggtgtggtagtag 192 |||||||||||||| || ||||| |||| ||||||||| | | |||||||||||||| Sbjct: 110334 acctggtccagcaccggcccgcacggcgacacgccgtcgccggcgctggtgtggtagtag 110275 Query: 193 gagctgtagaaggtgaccctgg 214 ||||||||||| || ||||||| Sbjct: 110274 gagctgtagaacgtcaccctgg 110253
>ref|XM_477080.1| Oryza sativa (japonica cultivar-group), mRNA Length = 560 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 133 acctggtccagcacggggccgcagagcgatacgccgtcggtgaccttggtgtggtagtag 192 |||||||||||||| || ||||| |||| ||||||||| | | |||||||||||||| Sbjct: 267 acctggtccagcaccggcccgcacggcgacacgccgtcgccggcgctggtgtggtagtag 208 Query: 193 gagctgtagaaggtgaccctgg 214 ||||||||||| || ||||||| Sbjct: 207 gagctgtagaacgtcaccctgg 186 Score = 40.1 bits (20), Expect = 5.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 322 agcatggagccgtggcagccgttcttggcgtcgccgacgacgtaggag 369 ||||||| ||| | |||||||| | |||||||||||||| || ||||| Sbjct: 48 agcatggcgccctcgcagccgtccctggcgtcgccgacggcgaaggag 1
>dbj|AK107761.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-A09, full insert sequence Length = 560 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 133 acctggtccagcacggggccgcagagcgatacgccgtcggtgaccttggtgtggtagtag 192 |||||||||||||| || ||||| |||| ||||||||| | | |||||||||||||| Sbjct: 267 acctggtccagcaccggcccgcacggcgacacgccgtcgccggcgctggtgtggtagtag 208 Query: 193 gagctgtagaaggtgaccctgg 214 ||||||||||| || ||||||| Sbjct: 207 gagctgtagaacgtcaccctgg 186 Score = 40.1 bits (20), Expect = 5.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 322 agcatggagccgtggcagccgttcttggcgtcgccgacgacgtaggag 369 ||||||| ||| | |||||||| | |||||||||||||| || ||||| Sbjct: 48 agcatggcgccctcgcagccgtccctggcgtcgccgacggcgaaggag 1
>ref|XM_464560.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1499 Score = 54.0 bits (27), Expect = 4e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 391 acggtgcggatgacctgcgcgatggcgctctnccgccc 428 ||||||||||| ||||||||||| ||||||| |||||| Sbjct: 981 acggtgcggatcacctgcgcgatcgcgctctcccgccc 944
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 54.0 bits (27), Expect = 4e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 391 acggtgcggatgacctgcgcgatggcgctctnccgccc 428 ||||||||||| ||||||||||| ||||||| |||||| Sbjct: 5913131 acggtgcggatcacctgcgcgatcgcgctctcccgccc 5913168
>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056C19 Length = 147739 Score = 54.0 bits (27), Expect = 4e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 391 acggtgcggatgacctgcgcgatggcgctctnccgccc 428 ||||||||||| ||||||||||| ||||||| |||||| Sbjct: 91352 acggtgcggatcacctgcgcgatcgcgctctcccgccc 91389
>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544H11 Length = 178376 Score = 54.0 bits (27), Expect = 4e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 391 acggtgcggatgacctgcgcgatggcgctctnccgccc 428 ||||||||||| ||||||||||| ||||||| |||||| Sbjct: 142933 acggtgcggatcacctgcgcgatcgcgctctcccgccc 142970
>dbj|AK106819.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-D06, full insert sequence Length = 1498 Score = 54.0 bits (27), Expect = 4e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 391 acggtgcggatgacctgcgcgatggcgctctnccgccc 428 ||||||||||| ||||||||||| ||||||| |||||| Sbjct: 980 acggtgcggatcacctgcgcgatcgcgctctcccgccc 943
>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence Length = 1207381 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 241 aggctcgacgccttgaacccgc 262 |||||||||||||||||||||| Sbjct: 939960 aggctcgacgccttgaacccgc 939939
>gb|AE009672.1| Brucella melitensis 16M chromosome II, section 34 of 107 of the complete sequence Length = 11096 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 241 aggctcgacgccttgaacccgc 262 |||||||||||||||||||||| Sbjct: 2989 aggctcgacgccttgaacccgc 3010
>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence Length = 1162204 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 241 aggctcgacgccttgaacccgc 262 |||||||||||||||||||||| Sbjct: 277221 aggctcgacgccttgaacccgc 277242
>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence, strain 2308 Length = 1156948 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 241 aggctcgacgccttgaacccgc 262 |||||||||||||||||||||| Sbjct: 277290 aggctcgacgccttgaacccgc 277311
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 159 cgatacgccgtcggtgaccttggtg 183 |||| |||||||||||||||||||| Sbjct: 3494547 cgatgcgccgtcggtgaccttggtg 3494571
>gb|AE008737.2| Salmonella typhimurium LT2, section 45 of 220 of the complete genome Length = 65219 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 agcggcacgatcttgacctgg 138 ||||||||||||||||||||| Sbjct: 41418 agcggcacgatcttgacctgg 41438
>dbj|AK143650.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430006C17 product:Janus kinase 1, full insert sequence Length = 4853 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 326 tggagccgtggcagccgttct 346 ||||||||||||||||||||| Sbjct: 1592 tggagccgtggcagccgttct 1572
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggcagccgttcttggcgtcg 354 |||||||||||||||||||| Sbjct: 2688888 ggcagccgttcttggcgtcg 2688869
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 ggcggcgaaggcctccacga 322 |||||||||||||||||||| Sbjct: 555589 ggcggcgaaggcctccacga 555608
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 taggagctgtagaaggtgac 209 |||||||||||||||||||| Sbjct: 1974423 taggagctgtagaaggtgac 1974442
>ref|XM_365666.1| Magnaporthe grisea 70-15 hypothetical protein (MG02368.4) partial mRNA Length = 2010 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 ttcttggcgtcgccgacgac 362 |||||||||||||||||||| Sbjct: 479 ttcttggcgtcgccgacgac 460
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 396 gcggatgacctgcgcgatggcgct 419 |||||| ||||||||||||||||| Sbjct: 3655710 gcggatcacctgcgcgatggcgct 3655687
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggcgtcgccgacgacgtagg 367 |||||||||||||||||||| Sbjct: 4385787 ggcgtcgccgacgacgtagg 4385768
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gccgttcttggcgtcgccga 358 |||||||||||||||||||| Sbjct: 4184391 gccgttcttggcgtcgccga 4184410
>gb|AE009723.1| Brucella melitensis 16M chromosome II, section 85 of 107 of the complete sequence Length = 10966 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 tcttggcgtcgccgacgacg 363 |||||||||||||||||||| Sbjct: 7325 tcttggcgtcgccgacgacg 7306
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 gtcgccgacgacgtaggaga 370 |||||||||||||||||||| Sbjct: 595336 gtcgccgacgacgtaggaga 595355 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,183,942 Number of Sequences: 3902068 Number of extensions: 2183942 Number of successful extensions: 41797 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 40980 Number of HSP's gapped (non-prelim): 812 length of query: 432 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 410 effective length of database: 17,147,199,772 effective search space: 7030351906520 effective search space used: 7030351906520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
