ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags28a12 |
|---|---|
| Clone Library Name | barley_pub |
>NOX3_RAT (Q672K1) NADPH oxidase 3 (EC 1.6.3.-)| Length = 568 Score = 70.5 bits (171), Expect = 2e-12 Identities = 39/136 (28%), Positives = 72/136 (52%), Gaps = 7/136 (5%) Frame = -1 Query: 461 VTREEGSFEWFRGVM----NEVAEKDKDGVIELHNHCSSVYQEG-DARSALIVMLQELNH 297 + R+ +FEWF ++ +++E+ K ++ H +Y G D A+ + L H Sbjct: 442 ICRDAAAFEWFADLLLSLETQMSEQGKAHLLSYH-----IYLTGWDEYQAIHIAL----H 492 Query: 296 AKKGVDILSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLRQLSADFT 117 + +D+++G KT + RPNW FK+IA NH + +GVF+CG + L+++ ++ Sbjct: 493 WDESLDVITGLKQKTFYGRPNWNEEFKQIAYNHPSSSIGVFFCGPKAMSKTLQKMCRLYS 552 Query: 116 HN--TNTKFEFHKENF 75 + F ++KENF Sbjct: 553 SSDPRGVHFYYNKENF 568
>NOX3_MOUSE (Q672J9) NADPH oxidase 3 (EC 1.6.3.-)| Length = 568 Score = 70.1 bits (170), Expect = 3e-12 Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 7/136 (5%) Frame = -1 Query: 461 VTREEGSFEWFRGVM----NEVAEKDKDGVIELHNHCSSVYQEG-DARSALIVMLQELNH 297 + R+ G+FEWF ++ ++E+ K ++ H +Y G D A+ + L H Sbjct: 442 ICRDAGAFEWFADLLLSLETRMSEQGKAHLLSYH-----IYLTGWDENQAIHIAL----H 492 Query: 296 AKKGVDILSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLRQLSADFT 117 + +D+++G K + RPNW FK+IA NH + +GVF+CG + L+++ ++ Sbjct: 493 WDESLDVITGLKQKAFYGRPNWNDEFKQIAYNHPSSSIGVFFCGSKAMSKTLQKMCRLYS 552 Query: 116 --HNTNTKFEFHKENF 75 F ++KENF Sbjct: 553 SVDPRGVHFYYNKENF 568
>DUOX1_CANFA (Q9MZF4) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| thyroid oxidase 1) (Thyroid oxidase 1) Length = 1551 Score = 66.6 bits (161), Expect = 3e-11 Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 1/130 (0%) Frame = -1 Query: 461 VTREEGSFEWFRGVMNEVAEKDKDGVIELHNHCSSVYQEGDARSALIVMLQELNHAKKGV 282 VTR + FEW ++ EV E D ++ +H + + + ++ D R+ ++ + + Sbjct: 1422 VTRTQRQFEWLADIIREVEENDCQDLVSVHIYITQLAEKFDLRTTMLYICERHFQKVLNR 1481 Query: 281 DILSGTSVKTHFARPNWRSVFKRI-AVNHENQRVGVFYCGEPVLVAQLRQLSADFTHNTN 105 + +G THF RP + FK + V+ + +++GVF CG P + + + Sbjct: 1482 SLFTGLRSITHFGRPPFEPFFKSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDR 1541 Query: 104 TKFEFHKENF 75 T F H ENF Sbjct: 1542 THFSHHYENF 1551
>NOX3_HUMAN (Q9HBY0) NADPH oxidase 3 (EC 1.6.3.-) (gp91phox homolog 3) (GP91-3)| (Mitogenic oxidase 2) Length = 568 Score = 66.2 bits (160), Expect = 4e-11 Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 10/139 (7%) Frame = -1 Query: 461 VTREEGSFEWFRGVM----NEVAEKDKDGVIELHNHCSSVYQEG-DARSALIVMLQELNH 297 + R+ +FEWF ++ ++E+ K + H ++ G D AL + L H Sbjct: 442 ICRDARAFEWFADLLLSLETRMSEQGKTHFLSYH-----IFLTGWDENQALHIAL----H 492 Query: 296 AKKGVDILSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLRQL----- 132 + D+++G KT + RPNW + FK+IA NH + +GVF+CG L L+++ Sbjct: 493 WDENTDVITGLKQKTFYGRPNWNNEFKQIAYNHPSSSIGVFFCGPKALSRTLQKMCHLYS 552 Query: 131 SADFTHNTNTKFEFHKENF 75 SAD F ++KE+F Sbjct: 553 SAD---PRGVHFYYNKESF 568
>NOX5_HUMAN (Q96PH1) NADPH oxidase 5 (EC 1.6.3.-)| Length = 765 Score = 65.5 bits (158), Expect = 6e-11 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 5/134 (3%) Frame = -1 Query: 461 VTREEGSFEWFRGV-----MNEVAEKDKDGVIELHNHCSSVYQEGDARSALIVMLQELNH 297 + R++ SFEWF + M++ E +ELH + +S + D ++ + M +L Sbjct: 639 INRDQRSFEWFVSLLTKLEMDQAEEAQYGRFLELHMYMTSALGKNDMKAIGLQMALDLLA 698 Query: 296 AKKGVDILSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLRQLSADFT 117 K+ D ++G +T RP+W VF+++A + +V VF+CG P L L+ Sbjct: 699 NKEKKDSITGLQTRTQPGRPDWSKVFQKVAAEKKG-KVQVFFCGSPALAKVLK------G 751 Query: 116 HNTNTKFEFHKENF 75 H F F +ENF Sbjct: 752 HCEKFGFRFFQENF 765
>DUOX1_HUMAN (Q9NRD9) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| thyroid oxidase 1) (Thyroid oxidase 1) (Large NOX 1) (Long NOX 1) Length = 1551 Score = 65.5 bits (158), Expect = 6e-11 Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 1/130 (0%) Frame = -1 Query: 461 VTREEGSFEWFRGVMNEVAEKDKDGVIELHNHCSSVYQEGDARSALIVMLQELNHAKKGV 282 VTR + FEW ++ EV E D ++ +H + + + ++ D R+ ++ + + Sbjct: 1422 VTRTQRQFEWLADIIREVEENDHQDLVSVHIYITQLAEKFDLRTTMLYICERHFQKVLNR 1481 Query: 281 DILSGTSVKTHFARPNWRSVFKRI-AVNHENQRVGVFYCGEPVLVAQLRQLSADFTHNTN 105 + +G THF RP + F + V+ + +++GVF CG P + + + Sbjct: 1482 SLFTGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDR 1541 Query: 104 TKFEFHKENF 75 T F H ENF Sbjct: 1542 THFSHHYENF 1551
>DUOX1_RAT (Q8CIY2) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1551 Score = 65.1 bits (157), Expect = 8e-11 Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 1/130 (0%) Frame = -1 Query: 461 VTREEGSFEWFRGVMNEVAEKDKDGVIELHNHCSSVYQEGDARSALIVMLQELNHAKKGV 282 VTR + FEW ++ EV E D ++ +H + + + ++ D R+ ++ + + Sbjct: 1422 VTRTQRQFEWLADIIREVEENDSRDLVSVHIYITQLAEKFDLRTTMLYICERHFQKVLNR 1481 Query: 281 DILSGTSVKTHFARPNWRSVFKRI-AVNHENQRVGVFYCGEPVLVAQLRQLSADFTHNTN 105 + +G THF RP + F + V+ + +++GVF CG P + + + Sbjct: 1482 SLFTGLRSVTHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINKQDR 1541 Query: 104 TKFEFHKENF 75 T F H ENF Sbjct: 1542 THFSHHYENF 1551
>NOX1_RAT (Q9WV87) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/NADPH| mitogenic oxidase subunit P65-MOX) (Mitogenic oxidase 1) (MOX1) Length = 563 Score = 65.1 bits (157), Expect = 8e-11 Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 4/133 (3%) Frame = -1 Query: 461 VTREEGSFEWFRGVMNEVA-EKDKDGVIELHNHCSSVYQEG-DARSALIVMLQELNHAKK 288 + RE G+F WF ++N + E D+ G + N+ ++ G D+ A L + + Sbjct: 437 ICRETGAFAWFNNLLNSLEQEMDELGKPDFLNY--RLFLTGWDSNIAGHAAL----NFDR 490 Query: 287 GVDILSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLRQLSADFT--H 114 D+L+G KT F RP W + F RIA H VGVF CG P L LR+ ++ Sbjct: 491 ATDVLTGLKQKTSFGRPMWDNEFSRIATAHPKSVVGVFLCGPPTLAKSLRKCCRRYSSLD 550 Query: 113 NTNTKFEFHKENF 75 +F F+KE F Sbjct: 551 PRKVQFYFNKETF 563
>DUOX1_PIG (Q8HZK3) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1553 Score = 64.7 bits (156), Expect = 1e-10 Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 1/130 (0%) Frame = -1 Query: 461 VTREEGSFEWFRGVMNEVAEKDKDGVIELHNHCSSVYQEGDARSALIVMLQELNHAKKGV 282 VTR + FEW ++ EV E D ++ +H + + + ++ D R+ ++ + + Sbjct: 1424 VTRTQRQFEWLADIIREVEENDHRDLVSVHIYITQLAEKFDLRTTMLYICERHFQKVLNR 1483 Query: 281 DILSGTSVKTHFARPNWRSVFKRI-AVNHENQRVGVFYCGEPVLVAQLRQLSADFTHNTN 105 + +G THF RP + F + V+ + +++GVF CG P + + + Sbjct: 1484 SLFTGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDR 1543 Query: 104 TKFEFHKENF 75 T F H ENF Sbjct: 1544 THFSHHYENF 1553
>DUOX1_CAEEL (O61213) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (DUOX1)| (NADPH thyroid oxidase 1) (Blistered cuticle protein 3) Length = 1497 Score = 64.3 bits (155), Expect = 1e-10 Identities = 31/109 (28%), Positives = 60/109 (55%), Gaps = 2/109 (1%) Frame = -1 Query: 443 SFEWFRGVMNEVAEKDKDGVIELHNHCSSVYQEGDARSALIVMLQELNHA-KKGVDILSG 267 ++EWF V+ V ++ + G++E H + + + D R+ ++ + ++ A G+ + +G Sbjct: 1372 NYEWFVDVLKNVEDQARSGILETHIFVTQTFHKFDLRTTMLYICEKHFRATNSGISMFTG 1431 Query: 266 TSVKTHFARPNWRSVFKRIAVNHENQ-RVGVFYCGEPVLVAQLRQLSAD 123 K HF RPN+++ F+ I H+ Q ++GVF CG L + + AD Sbjct: 1432 LHAKNHFGRPNFKAFFQFIQSEHKEQSKIGVFSCGPVNLNESIAEGCAD 1480
>CY24B_HUMAN (P04839) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 569 Score = 63.9 bits (154), Expect = 2e-10 Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 6/133 (4%) Frame = -1 Query: 455 REEGSFEWFRGVM----NEVAEKDKDGVIELHNHCSSVYQEGDARSALIVMLQELNHAKK 288 R+ +FEWF ++ +++ E++ G + + + + + E A + H + Sbjct: 445 RDTHAFEWFADLLQLLESQMQERNNAGFLSYNIYLTG-WDESQANHFAV-------HHDE 496 Query: 287 GVDILSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLRQLSADFTHN- 111 D+++G KT + RPNW + FK IA H N R+GVF CG L L + S + + Sbjct: 497 EKDVITGLKQKTLYGRPNWDNEFKTIASQHPNTRIGVFLCGPEALAETLSKQSISNSESG 556 Query: 110 -TNTKFEFHKENF 75 F F+KENF Sbjct: 557 PRGVHFIFNKENF 569
>DUOX2_PIG (Q8HZK2) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-)| (NADH/NADPH thyroid oxidase p138-tox) Length = 1545 Score = 63.9 bits (154), Expect = 2e-10 Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 1/130 (0%) Frame = -1 Query: 461 VTREEGSFEWFRGVMNEVAEKDKDGVIELHNHCSSVYQEGDARSALIVMLQELNHAKKGV 282 VTR + FEW ++ EV E D ++ +H + + + ++ D R+ ++ + + Sbjct: 1416 VTRTQRQFEWLADIIREVEENDHRDLVSVHIYITQLAEKFDLRTTMLYICERHFQKVLNR 1475 Query: 281 DILSGTSVKTHFARPNWRSVFKRI-AVNHENQRVGVFYCGEPVLVAQLRQLSADFTHNTN 105 + +G THF RP + F + V+ + +++GVF CG P + + + Sbjct: 1476 SLFTGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKTCQLINRQDQ 1535 Query: 104 TKFEFHKENF 75 T F H ENF Sbjct: 1536 THFVHHYENF 1545
>CY24B_BOVIN (O46522) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 63.2 bits (152), Expect = 3e-10 Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 6/133 (4%) Frame = -1 Query: 455 REEGSFEWFRGVMN----EVAEKDKDGVIELHNHCSSVYQEGDARSALIVMLQELNHAKK 288 R+ +FEWF ++ ++ EK+ + +N C + + E A + H + Sbjct: 446 RDTHAFEWFADLLQLLETQMQEKNNTDFLS-YNICLTGWDESQASHFAM-------HHDE 497 Query: 287 GVDILSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLRQ--LSADFTH 114 D+++G KT + RPNW + FK I H N R+GVF CG L L + +S + Sbjct: 498 EKDVITGLKQKTLYGRPNWDNEFKTIGSQHPNTRIGVFLCGPEALADTLNKQCISNSDSG 557 Query: 113 NTNTKFEFHKENF 75 F F+KENF Sbjct: 558 PRGVHFIFNKENF 570
>CY24B_BISBI (Q95L74) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 63.2 bits (152), Expect = 3e-10 Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 6/133 (4%) Frame = -1 Query: 455 REEGSFEWFRGVMN----EVAEKDKDGVIELHNHCSSVYQEGDARSALIVMLQELNHAKK 288 R+ +FEWF ++ ++ EK+ + +N C + + E A + H + Sbjct: 446 RDTHAFEWFADLLQLLETQMQEKNNTDFLS-YNICLTGWDESQASHFAM-------HHDE 497 Query: 287 GVDILSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLRQ--LSADFTH 114 D+++G KT + RPNW + FK I H N R+GVF CG L L + +S + Sbjct: 498 EKDVITGLKQKTLYGRPNWDNEFKTIGSQHPNTRIGVFLCGPEALADTLNKQCISNSDSG 557 Query: 113 NTNTKFEFHKENF 75 F F+KENF Sbjct: 558 PRGVHFIFNKENF 570
>DUOX2_HUMAN (Q9NRD8) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (NADH/NADPH thyroid oxidase p138-tox) (p138 thyroid oxidase) (Large NOX 2) (Long NOX 2) Length = 1548 Score = 62.4 bits (150), Expect = 5e-10 Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 1/130 (0%) Frame = -1 Query: 461 VTREEGSFEWFRGVMNEVAEKDKDGVIELHNHCSSVYQEGDARSALIVMLQELNHAKKGV 282 VTR + FEW ++ EV E D ++ +H + + + ++ D R+ ++ + + Sbjct: 1419 VTRTQRQFEWLADIIQEVEENDHQDLVSVHIYVTQLAEKFDLRTTMLYICERHFQKVLNR 1478 Query: 281 DILSGTSVKTHFARPNWRSVFKRI-AVNHENQRVGVFYCGEPVLVAQLRQLSADFTHNTN 105 + +G THF RP + F + V+ + +++GVF CG P + + + Sbjct: 1479 SLFTGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLVNRQDR 1538 Query: 104 TKFEFHKENF 75 F H ENF Sbjct: 1539 AHFMHHYENF 1548
>CY24B_PIG (P52649) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 beta Length = 484 Score = 61.2 bits (147), Expect = 1e-09 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 6/133 (4%) Frame = -1 Query: 455 REEGSFEWFRGVMN----EVAEKDKDGVIELHNHCSSVYQEGDARSALIVMLQELNHAKK 288 R+ +FEWF ++ ++ E++ G + + + + + E A + H + Sbjct: 360 RDTHAFEWFADLLQLLETQMQERNNAGFLSYNIYLTG-WDESQANHFAV-------HHDE 411 Query: 287 GVDILSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLRQ--LSADFTH 114 D+++G KT + RPNW + FK IA H R+GVF CG L L + +S + Sbjct: 412 EKDVITGLKQKTLYGRPNWDNEFKTIASQHPTTRIGVFLCGPEALAETLNKQCISNSDSS 471 Query: 113 NTNTKFEFHKENF 75 F F+KENF Sbjct: 472 PRGVHFIFNKENF 484
>NOX1_HUMAN (Q9Y5S8) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/NADPH| mitogenic oxidase subunit P65-MOX) (Mitogenic oxidase 1) (MOX1) Length = 564 Score = 60.8 bits (146), Expect = 2e-09 Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 3/132 (2%) Frame = -1 Query: 461 VTREEGSFEWFRGVMNEVAEKDKD-GVIELHNHCSSVYQEGDARSALIVMLQELNHAKKG 285 + RE G+F WF ++ + ++ ++ G + N+ ++ G + IV LN K Sbjct: 438 ICRETGAFSWFNNLLTSLEQEMEELGKVGFLNY--RLFLTG--WDSNIVGHAALNF-DKA 492 Query: 284 VDILSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLRQLSADFT--HN 111 DI++G KT F RP W + F IA +H VGVF CG L LR+ ++ Sbjct: 493 TDIVTGLKQKTSFGRPMWDNEFSTIATSHPKSVVGVFLCGPRTLAKSLRKCCHRYSSLDP 552 Query: 110 TNTKFEFHKENF 75 +F F+KENF Sbjct: 553 RKVQFYFNKENF 564
>CY24B_MOUSE (Q61093) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 58.9 bits (141), Expect = 6e-09 Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 6/133 (4%) Frame = -1 Query: 455 REEGSFEWFRGVMN----EVAEKDKDGVIELHNHCSSVYQEGDARSALIVMLQELNHAKK 288 R+ +FEWF ++ ++ E++ + + + + + E A + H + Sbjct: 446 RDTHAFEWFADLLQLLETQMQERNNANFLSYNIYLTG-WDESQANHFAV-------HHDE 497 Query: 287 GVDILSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLRQLSADFTHN- 111 D+++G KT + RPNW + FK IA H N +GVF CG L L + S + + Sbjct: 498 EKDVITGLKQKTLYGRPNWDNEFKTIASEHPNTTIGVFLCGPEALAETLSKQSISNSESG 557 Query: 110 -TNTKFEFHKENF 75 F F+KENF Sbjct: 558 PRGVHFIFNKENF 570
>DUOX_DROME (Q9VQH2) Dual oxidase (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1475 Score = 57.4 bits (137), Expect = 2e-08 Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 4/126 (3%) Frame = -1 Query: 440 FEWFRGVMNEVAEKDKDGVIELHNHCSSVYQEGDARSALIVMLQELNHAKKGVDILSGTS 261 FEWF V+ +V +KD V+E+H + + + D R+ ++ + + I +G Sbjct: 1351 FEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKTSIFTGLK 1410 Query: 260 VKTHFARPNWRSVFKRIAVNHEN-QRVGVFYCGEPVLVAQLRQLSADFTHNTNTK---FE 93 HF RP+ S K + H ++GVF CG L + +SA N K F Sbjct: 1411 AVNHFGRPDMSSFLKFVQKKHSYVSKIGVFSCGPRPLTKSV--MSACDEVNKTRKLPYFI 1468 Query: 92 FHKENF 75 H ENF Sbjct: 1469 HHFENF 1474
>DUOX2_RAT (Q9ES45) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-)| (NADH/NADPH thyroid oxidase THOX2) (Thyroid oxidase 2) (Large NOX 2) (Long NOX 2) Length = 1517 Score = 56.6 bits (135), Expect = 3e-08 Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 1/130 (0%) Frame = -1 Query: 461 VTREEGSFEWFRGVMNEVAEKDKDGVIELHNHCSSVYQEGDARSALIVMLQELNHAKKGV 282 VTR + FEW ++ EV E ++ +H + + + ++ D R+ ++ + + Sbjct: 1388 VTRTQRQFEWLADIIREVEENGSRDLVSVHIYITQLAEKFDLRTTMLYICERHFQKVLNR 1447 Query: 281 DILSGTSVKTHFARPNWRSVFKRI-AVNHENQRVGVFYCGEPVLVAQLRQLSADFTHNTN 105 + +G THF RP + + V+ + ++GVF CG P + + + Sbjct: 1448 SLFTGLRSVTHFGRPPFELFLDSLQEVHPQVHKIGVFSCGPPGMTKNVEKACQLINRQDR 1507 Query: 104 TKFEFHKENF 75 F H ENF Sbjct: 1508 AHFVHHYENF 1517
>MAML1_MOUSE (Q6T264) Mastermind-like protein 1 (Mam-1)| Length = 1020 Score = 35.8 bits (81), Expect = 0.055 Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 2/110 (1%) Frame = -2 Query: 337 LGPRSSSCSRNSTMPRRGSIFCPGPASRP--TLPGLTGEASSSASQSTMRISALGSSTAA 164 LGP +SSC R P+ G++ GP P +LP +G+ +Q T GS + Sbjct: 706 LGPSNSSCPR--VFPQPGTLMSMGPGHAPVSSLPSSSGQQDRGVAQFT------GSQSLP 757 Query: 163 SLFLWRSCGSCRQTSPTIPTQSLSFTRRISNYTYVCSYNVRTCLXYGXAS 14 L+ Q P Q+ S I T V N T YG S Sbjct: 758 QNSLYGMASGLAQIVAQPPPQATSTHAHIPRQTNV-GQNASTSAAYGQNS 806
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 35.8 bits (81), Expect = 0.055 Identities = 28/87 (32%), Positives = 38/87 (43%) Frame = -2 Query: 325 SSSCSRNSTMPRRGSIFCPGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWR 146 SS+ + +S+ S P+S T LT +SSS S S S SST+ S Sbjct: 208 SSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTS 267 Query: 145 SCGSCRQTSPTIPTQSLSFTRRISNYT 65 + S TSP+ + S S T S T Sbjct: 268 TSSSSTSTSPSSKSTSASSTSTSSYST 294 Score = 35.8 bits (81), Expect = 0.055 Identities = 31/98 (31%), Positives = 42/98 (42%) Frame = -2 Query: 331 PRSSSCSRNSTMPRRGSIFCPGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFL 152 P ++S S ST P S P+S T T +SSS S S+ S SST+ S L Sbjct: 181 PTTTSLSSTSTSPSSTST---SPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSL 237 Query: 151 WRSCGSCRQTSPTIPTQSLSFTRRISNYTYVCSYNVRT 38 + S TS + + S S T + T S + T Sbjct: 238 TSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTST 275 Score = 35.4 bits (80), Expect = 0.072 Identities = 28/86 (32%), Positives = 40/86 (46%) Frame = -2 Query: 322 SSCSRNSTMPRRGSIFCPGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRS 143 +S S +ST + S +S T P T +SSS S S S SST+ S + + Sbjct: 238 TSTSSSSTSTSQSST-STSSSSTSTSPSSTSTSSSSTSTSPSSKSTSASSTSTSSYSTST 296 Query: 142 CGSCRQTSPTIPTQSLSFTRRISNYT 65 S +SPT+ + S S T S +T Sbjct: 297 SPSLTSSSPTLASTSPSSTSISSTFT 322 Score = 33.9 bits (76), Expect = 0.21 Identities = 29/87 (33%), Positives = 38/87 (43%) Frame = -2 Query: 325 SSSCSRNSTMPRRGSIFCPGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWR 146 SS+ S N T S P+S T P T +SSS S S+ S SST+ S Sbjct: 174 SSTTSSNPTTTSLSST-STSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTS 232 Query: 145 SCGSCRQTSPTIPTQSLSFTRRISNYT 65 + S TS + + S S T S+ T Sbjct: 233 TSSSLTSTSSSSTSTSQSSTSTSSSST 259 Score = 31.6 bits (70), Expect = 1.0 Identities = 27/85 (31%), Positives = 38/85 (44%) Frame = -2 Query: 325 SSSCSRNSTMPRRGSIFCPGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWR 146 S+S S++ST S P+S T T + SS S S S ST+ S L Sbjct: 244 STSTSQSSTSTSSSST-STSPSSTSTSSSSTSTSPSSKSTSASSTSTSSYSTSTSPSLTS 302 Query: 145 SCGSCRQTSPTIPTQSLSFTRRISN 71 S + TSP+ + S +FT S+ Sbjct: 303 SSPTLASTSPSSTSISSTFTDSTSS 327 Score = 29.3 bits (64), Expect = 5.1 Identities = 26/81 (32%), Positives = 37/81 (45%) Frame = -2 Query: 328 RSSSCSRNSTMPRRGSIFCPGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLW 149 +S+S S ST S +S PTL + ++S +S T S+LGSS A+ Sbjct: 280 KSTSASSTSTSSYSTSTSPSLTSSSPTLASTSPSSTSISSTFTDSTSSLGSSIAS----- 334 Query: 148 RSCGSCRQTSPTIPTQSLSFT 86 S S SP+ P S+ T Sbjct: 335 -SSTSVSLYSPSTPVYSVPST 354
>YG1F_YEAST (P53214) Hypothetical 57.5 kDa protein in VMA7-RPS25A intergenic| region Length = 551 Score = 34.3 bits (77), Expect = 0.16 Identities = 26/92 (28%), Positives = 46/92 (50%) Frame = -2 Query: 322 SSCSRNSTMPRRGSIFCPGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRS 143 SS S +ST+ S F +S + + +SSS+S S+ L +S+++S++ S Sbjct: 226 SSSSSSSTLFSYSSSFSSSSSSSSS----SSSSSSSSSSSSSSYFTLSTSSSSSIYSSSS 281 Query: 142 CGSCRQTSPTIPTQSLSFTRRISNYTYVCSYN 47 S +S + PT S++ T S+ T Y+ Sbjct: 282 YPSFSSSSSSNPTSSITSTSASSSITPASEYS 313
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor| Length = 374 Score = 33.1 bits (74), Expect = 0.36 Identities = 27/105 (25%), Positives = 46/105 (43%) Frame = -2 Query: 325 SSSCSRNSTMPRRGSIFCPGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWR 146 SSS S +S+ S +S + + +SSS+S S+ S +S+ +S Sbjct: 162 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSS 221 Query: 145 SCGSCRQTSPTIPTQSLSFTRRISNYTYVCSYNVRTCLXYGXASS 11 S S +S + P+ S SF +S+ T++ + V SS Sbjct: 222 SSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVTPSSSSSSTSS 266
>Y2660_AGRT5 (Q8UC38) UPF0235 protein Atu2660/AGR_C_4821| Length = 112 Score = 33.1 bits (74), Expect = 0.36 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 6/72 (8%) Frame = -1 Query: 404 EKDKDGVIELHNHCSSVYQEGDARSALIVML-QELNHAKKGVDILSGTSVKTHFAR---- 240 E+D DG L S+V + G A ALIV+L ++L K + +SG + + R Sbjct: 40 EQDADGNAHLKARVSAVPEGGKANKALIVLLAKKLGLPKSSITFISGETARKKILRIDTD 99 Query: 239 -PNWRSVFKRIA 207 ++ +FK++A Sbjct: 100 PEDFEKLFKKLA 111
>YNR6_YEAST (P53882) Hypothetical 67.4 kDa protein in RPS3-PSD1 intergenic| region Length = 636 Score = 32.7 bits (73), Expect = 0.46 Identities = 22/61 (36%), Positives = 32/61 (52%) Frame = +1 Query: 277 ISTPFLAWLSSWSMTMSADRASPSWYTLEQWLWSSITPSLSFSATSFITPLNHSKEPSSL 456 I TP ++ SS S S+ + W +L +S TP+LS SATS + + PSSL Sbjct: 116 IITPSMSIFSSTSPMSSSSSITSEWSSL-----TSTTPTLSSSATSLSSSWSSLSSPSSL 170 Query: 457 V 459 + Sbjct: 171 L 171
>LMO6_MOUSE (Q80VL3) LIM domain only protein 6 (Triple LIM domain protein 6)| Length = 624 Score = 32.3 bits (72), Expect = 0.61 Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 22/75 (29%) Frame = -2 Query: 322 SSCSR----NSTMPRRGSIFC------------PGPASRP------TLPGLTGEASSSAS 209 S CSR +PRRG IFC PGP R T P T AS SA+ Sbjct: 342 SRCSRPLLGRPFLPRRGLIFCSRACSLGSETTAPGPGRRSWSAGTVTTPLTTSTASFSAT 401 Query: 208 QSTMRISALGSSTAA 164 + T ++ G+ T A Sbjct: 402 EGTSETASKGTCTKA 416
>RPOB_DECAR (Q47JB0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1427 Score = 31.6 bits (70), Expect = 1.0 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = +3 Query: 198 MVDCDALEDASPVRPGKVG-LDAGPGQNIDPLLGMVEFLEHDD 323 +V C + PG+V +D PGQ + ++ FLEHDD Sbjct: 708 LVTCREKGETILAEPGRVQYMDVAPGQIVSVAASLIPFLEHDD 750
>PLXA1_HUMAN (Q9UIW2) Plexin-A1 precursor (Semaphorin receptor NOV)| Length = 1896 Score = 31.6 bits (70), Expect = 1.0 Identities = 21/84 (25%), Positives = 37/84 (44%) Frame = -2 Query: 286 GSIFCPGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRSCGSCRQTSPTIP 107 G I C P++R P G+ + ++ G A+ F++ +C S Q+ + Sbjct: 613 GRIHCRSPSAREVAPITRGQGDQRVVKLYLKSKETGKKFASVDFVFYNC-SVHQSC--LS 669 Query: 106 TQSLSFTRRISNYTYVCSYNVRTC 35 + SF Y +VC++NV C Sbjct: 670 CVNGSFPCHWCKYRHVCTHNVADC 693
>PDLI2_HUMAN (Q96JY6) PDZ and LIM domain protein 2 (PDZ-LIM protein mystique)| (PDZ-LIM protein) Length = 352 Score = 31.6 bits (70), Expect = 1.0 Identities = 21/47 (44%), Positives = 25/47 (53%) Frame = -2 Query: 328 RSSSCSRNSTMPRRGSIFCPGPASRPTLPGLTGEASSSASQSTMRIS 188 RSS S S PR GS F P P+S LTGEA+ S S ++ S Sbjct: 119 RSSYSSPTSLSPRAGSPFSPPPSS----SSLTGEAAISRSFQSLACS 161
>CPSM_RAT (P07756) Carbamoyl-phosphate synthase [ammonia], mitochondrial| precursor (EC 6.3.4.16) (Carbamoyl-phosphate synthetase I) (CPSase I) Length = 1500 Score = 31.6 bits (70), Expect = 1.0 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 Query: 193 FSWLTAMRLKTLRQLGRAKWVLTLVPDRISTPF 291 F W ++TLRQLG+ V+ P+ +ST F Sbjct: 992 FDWCAVSSIRTLRQLGKKTVVVNCNPETVSTDF 1024
>CPSM_MOUSE (Q8C196) Carbamoyl-phosphate synthase [ammonia], mitochondrial| precursor (EC 6.3.4.16) (Carbamoyl-phosphate synthetase I) (CPSase I) Length = 1500 Score = 31.6 bits (70), Expect = 1.0 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 Query: 193 FSWLTAMRLKTLRQLGRAKWVLTLVPDRISTPF 291 F W ++TLRQLG+ V+ P+ +ST F Sbjct: 992 FDWCAVSSIRTLRQLGKKTVVVNCNPETVSTDF 1024
>CPSM_HUMAN (P31327) Carbamoyl-phosphate synthase [ammonia], mitochondrial| precursor (EC 6.3.4.16) (Carbamoyl-phosphate synthetase I) (CPSase I) Length = 1500 Score = 31.6 bits (70), Expect = 1.0 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 Query: 193 FSWLTAMRLKTLRQLGRAKWVLTLVPDRISTPF 291 F W ++TLRQLG+ V+ P+ +ST F Sbjct: 992 FDWCAVSSIRTLRQLGKKTVVVNCNPETVSTDF 1024
>PDLI2_MACFA (Q9GKU1) PDZ and LIM domain protein 2| Length = 352 Score = 31.2 bits (69), Expect = 1.3 Identities = 21/47 (44%), Positives = 24/47 (51%) Frame = -2 Query: 328 RSSSCSRNSTMPRRGSIFCPGPASRPTLPGLTGEASSSASQSTMRIS 188 RSS S S PR GS F P P S P L GEA+ S S ++ S Sbjct: 119 RSSYSSPTSLSPRAGSPFSPPPFSSP----LAGEAAISRSFQSLACS 161
>RPOB_NITOC (Q3J8Q7) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1359 Score = 31.2 bits (69), Expect = 1.3 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Frame = +3 Query: 165 AAVEDPNALILMVDCDALEDASPVRPGKVG-LDAGPGQNIDPLLGMVEFLEHDD 323 AA E+ + ++V C + + + P KV +D P Q + ++ FLEHDD Sbjct: 629 AADEEGRLIDMLVSCRHKNEFTLLPPEKVQYIDVSPKQIVSVAASLIPFLEHDD 682
>MAD26_ORYSA (Q8L887) MADS-box transcription factor 26 (OsMADS26) (FDRMADS3)| (RMADS220) Length = 222 Score = 30.8 bits (68), Expect = 1.8 Identities = 18/59 (30%), Positives = 27/59 (45%) Frame = -1 Query: 425 GVMNEVAEKDKDGVIELHNHCSSVYQEGDARSALIVMLQELNHAKKGVDILSGTSVKTH 249 G M E+ E+ K E N C Q D + +V+ QE+N +KG+ + G H Sbjct: 61 GTMEELIERYKSASGEQANACGD--QRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEH 117
>TOP6A_METTH (O27089) Type II DNA topoisomerase VI subunit A (EC 5.99.1.3)| Length = 353 Score = 30.8 bits (68), Expect = 1.8 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 4/39 (10%) Frame = +3 Query: 225 ASPVRPGKVGLDA----GPGQNIDPLLGMVEFLEHDDER 329 A VR G + +DA G NI P + VEF++HD ER Sbjct: 143 ALTVREGDIEIDALRSGKSGYNISPTIDEVEFVDHDVER 181
>PORIM_RAT (Q5HZB0) Porimin precursor (Transmembrane protein 123)| Length = 194 Score = 30.8 bits (68), Expect = 1.8 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Frame = -2 Query: 322 SSCSRNSTMPRRGSIFCPGPAS-RPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWR 146 S+ +S +P+ + PA+ + + PG++ + SAS+ST + SA +ST S + Sbjct: 65 STVKPSSVLPKNVTAATVRPATIKVSTPGVSPHVTPSASKSTPKTSASPNSTQTSASMTT 124 Query: 145 SCGSCRQTSPTI 110 + S TS T+ Sbjct: 125 TAHSSLLTSVTV 136
>RPOB_LEGPN (O86094) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1368 Score = 30.4 bits (67), Expect = 2.3 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = +3 Query: 183 NALILMVDCDALEDASPVRPGKVG-LDAGPGQNIDPLLGMVEFLEHDD 323 N L +V C + S P K+ +D P Q + ++ FLEHDD Sbjct: 643 NILADLVPCRHQNEFSLTTPDKINYMDVSPKQIVSVAASLIPFLEHDD 690
>RPOB_LEGPL (Q5WZL9) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1368 Score = 30.4 bits (67), Expect = 2.3 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = +3 Query: 183 NALILMVDCDALEDASPVRPGKVG-LDAGPGQNIDPLLGMVEFLEHDD 323 N L +V C + S P K+ +D P Q + ++ FLEHDD Sbjct: 643 NILADLVPCRHQNEFSLTTPDKINYMDVSPKQIVSVAASLIPFLEHDD 690
>RPOB_LEGPH (Q5ZYQ0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1368 Score = 30.4 bits (67), Expect = 2.3 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = +3 Query: 183 NALILMVDCDALEDASPVRPGKVG-LDAGPGQNIDPLLGMVEFLEHDD 323 N L +V C + S P K+ +D P Q + ++ FLEHDD Sbjct: 643 NILADLVPCRHQNEFSLTTPDKINYMDVSPKQIVSVAASLIPFLEHDD 690
>RPOB_LEGPA (Q5X866) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1368 Score = 30.4 bits (67), Expect = 2.3 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = +3 Query: 183 NALILMVDCDALEDASPVRPGKVG-LDAGPGQNIDPLLGMVEFLEHDD 323 N L +V C + S P K+ +D P Q + ++ FLEHDD Sbjct: 643 NILADLVPCRHQNEFSLTTPDKINYMDVSPKQIVSVAASLIPFLEHDD 690
>PACS1_HUMAN (Q6VY07) Phosphofurin acidic cluster sorting protein 1 (PACS-1)| Length = 963 Score = 30.4 bits (67), Expect = 2.3 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = -2 Query: 265 PASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRSCGSCRQTSP 116 P +PT P L SSS+S S S+ SST+ S+ + + GS P Sbjct: 41 PPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGP 90
>PO2F3_MOUSE (P31362) POU domain, class 2, transcription factor 3| (Octamer-binding transcription factor 11) (Oct-11) (Epoc-1) Length = 431 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Frame = -2 Query: 307 NSTMPRRGSIFC-PGPASRPTLPGLTGEASSSASQSTMRISALGSSTAAS 161 +STMP + C PG SRP+ PG ASS + +A+ SS+++S Sbjct: 365 HSTMPGTVTSSCSPGNNSRPSSPGSGLHASSPTASQNNSKAAMNSSSSSS 414
>AAKG2_PONPY (Q5R4S0) 5'-AMP-activated protein kinase, gamma-2 subunit (AMPK| gamma-2 chain) (AMPK gamma2) Length = 524 Score = 30.4 bits (67), Expect = 2.3 Identities = 16/50 (32%), Positives = 23/50 (46%) Frame = -2 Query: 307 NSTMPRRGSIFCPGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASL 158 +S+ P G FCP PT P L + S++ +ALG + A L Sbjct: 150 SSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAALAAALGPAEAGML 199
>KR2_HHV11 (P04290) Probable serine/threonine-protein kinase (EC 2.7.11.1)| (Virion protein VMW57) Length = 518 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Frame = -2 Query: 268 GPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWR-SCGSCRQTSPTIPTQSLS 92 G + RP+ P L A S +S + S L A L WR S S R+ SP P + Sbjct: 41 GASGRPSGPSLQDAAVSRSSHGSRHRSGLRERLRAGLSRWRMSRSSHRRASPETPGTAAK 100 Query: 91 FTR 83 R Sbjct: 101 LNR 103
>AAKG2_HUMAN (Q9UGJ0) 5'-AMP-activated protein kinase, gamma-2 subunit (AMPK| gamma-2 chain) (AMPK gamma2) (H91620p) Length = 569 Score = 30.4 bits (67), Expect = 2.3 Identities = 16/50 (32%), Positives = 23/50 (46%) Frame = -2 Query: 307 NSTMPRRGSIFCPGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASL 158 +S+ P G FCP PT P L + S++ +ALG + A L Sbjct: 194 SSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAALAAALGPAEAGML 243
>GUN4_TRIRE (O14405) Endoglucanase-4 precursor (EC 3.2.1.4) (Endoglucanase IV)| (Endo-1,4-beta-glucanase IV) (Cellulase IV) (EGIV) Length = 344 Score = 30.4 bits (67), Expect = 2.3 Identities = 22/74 (29%), Positives = 35/74 (47%) Frame = -2 Query: 334 GPRSSSCSRNSTMPRRGSIFCPGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLF 155 G +++ + ++T+P GS GP SR T T +ASS S ST + + + Sbjct: 256 GSSAATATASATVPGGGS----GPTSRTTTTARTTQASSRPS-STPPATTSAPAGGPTQT 310 Query: 154 LWRSCGSCRQTSPT 113 L+ CG + PT Sbjct: 311 LYGQCGGSGYSGPT 324
>RS9_HALMA (P05763) 30S ribosomal protein S9P (HmaS9) (HS3) (F1)| Length = 131 Score = 30.4 bits (67), Expect = 2.3 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 7/80 (8%) Frame = +3 Query: 243 GKVGLDAGPGQNIDPLLGMVEFLE-----HDDERGP-SIALLVHARAVVVELDHSILVLL 404 G+V +D+ P + +DP L ++ LE DD RG + + V V+ + D + + Sbjct: 22 GRVRIDSQPVELVDPELAQLKMLEPFRIAEDDLRGEVDVEVSVEGGGVMGQADAARTAIA 81 Query: 405 GHLVHHPSE-PLKGAFLPCD 461 LV H ++ L+ AF+ D Sbjct: 82 RGLVDHTNDAELRDAFMEFD 101
>SYNJ1_RAT (Q62910) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 30.0 bits (66), Expect = 3.0 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 4/52 (7%) Frame = -2 Query: 328 RSSSCSRNSTMPRRGSIFCPGP----ASRPTLPGLTGEASSSASQSTMRISA 185 R + RN P+ G + PGP A+RPT+P G SA QS R+SA Sbjct: 1165 RKDNIGRNQPSPQAG-LAGPGPSGYGAARPTIPARAGVI--SAPQSQARVSA 1213
>RPOB_AQUPY (Q9X6Y1) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1469 Score = 30.0 bits (66), Expect = 3.0 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = +3 Query: 222 DASPVRPGKVG-LDAGPGQNIDPLLGMVEFLEHDDERGPSIALLVHARAVVVELDHSILV 398 D V+P +V +D P Q I P ++ FLEHDD + + +AV + + LV Sbjct: 722 DIRLVKPEQVDYIDVSPRQVISPSSSLIPFLEHDDANRALMGSNMQRQAVPLIFTQAPLV 781 Query: 399 LLG 407 G Sbjct: 782 GTG 784
>VG01_EHV1V (P84394) Hypothetical gene 1 protein| Length = 202 Score = 30.0 bits (66), Expect = 3.0 Identities = 22/79 (27%), Positives = 35/79 (44%) Frame = -2 Query: 322 SSCSRNSTMPRRGSIFCPGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRS 143 S C RR S+ C P + + S S+S S + +LGSS ++SL S Sbjct: 17 SMCPPPPNGARRASLGCAPPLNSRPVCCAPSSVSLSSSSSRRSMPSLGSSRSSSLPSTGS 76 Query: 142 CGSCRQTSPTIPTQSLSFT 86 S + +P++ S+T Sbjct: 77 LRSITRDPERLPSRPPSYT 95
>VG01_EHV1H (P84450) Hypothetical gene 1 protein| Length = 202 Score = 30.0 bits (66), Expect = 3.0 Identities = 22/79 (27%), Positives = 35/79 (44%) Frame = -2 Query: 322 SSCSRNSTMPRRGSIFCPGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRS 143 S C RR S+ C P + + S S+S S + +LGSS ++SL S Sbjct: 17 SMCPPPPNGARRASLGCAPPLNSRPVCCAPSSVSLSSSSSRRSMPSLGSSRSSSLPSTGS 76 Query: 142 CGSCRQTSPTIPTQSLSFT 86 S + +P++ S+T Sbjct: 77 LRSITRDPERLPSRPPSYT 95
>VG01_EHV1B (P28978) Hypothetical gene 1 protein| Length = 202 Score = 30.0 bits (66), Expect = 3.0 Identities = 22/79 (27%), Positives = 35/79 (44%) Frame = -2 Query: 322 SSCSRNSTMPRRGSIFCPGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRS 143 S C RR S+ C P + + S S+S S + +LGSS ++SL S Sbjct: 17 SMCPPPPNGARRASLGCAPPLNSRPVCCAPSSVSLSSSSSRRSMPSLGSSRSSSLPSTGS 76 Query: 142 CGSCRQTSPTIPTQSLSFT 86 S + +P++ S+T Sbjct: 77 LRSITRDPERLPSRPPSYT 95
>PACS1_RAT (O88588) Phosphofurin acidic cluster sorting protein 1 (PACS-1)| Length = 961 Score = 30.0 bits (66), Expect = 3.0 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = -2 Query: 271 PGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRSCGSCRQTSP 116 P +PT P L SSS+S S S+ SST+ S+ + + GS P Sbjct: 37 PSQPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGP 88
>YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 precursor| Length = 317 Score = 29.6 bits (65), Expect = 3.9 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 4/100 (4%) Frame = -2 Query: 340 MLGPRSSSC----SRNSTMPRRGSIFCPGPASRPTLPGLTGEASSSASQSTMRISALGSS 173 M+G R+SS S +ST S P+S + + ++SSS+S S+ S+ SS Sbjct: 136 MIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSS 195 Query: 172 TAASLFLWRSCGSCRQTSPTIPTQSLSFTRRISNYTYVCS 53 + +S S S S P+ S S + + S+ +++ S Sbjct: 196 SKSS-----SSSSSSSKSSASPSSSKS-SSKFSSSSFITS 229
>Y396_HELPY (O25157) Hypothetical protein HP0396| Length = 616 Score = 29.6 bits (65), Expect = 3.9 Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 7/54 (12%) Frame = +3 Query: 138 PQLRHKNR-----LAAVEDPNALILMVDCDALEDASP--VRPGKVGLDAGPGQN 278 P LR N L NALI CDAL+ ASP GK+G+DA N Sbjct: 400 PNLRDTNAIIEYILENFSKENALISQGVCDALDHASPEYAMGGKLGIDATSKSN 453
>Y396_HELPJ (Q9ZKF3) Hypothetical protein jhp_0985| Length = 616 Score = 29.6 bits (65), Expect = 3.9 Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 7/54 (12%) Frame = +3 Query: 138 PQLRHKNR-----LAAVEDPNALILMVDCDALEDASP--VRPGKVGLDAGPGQN 278 P LR N L NALI CDAL+ ASP GK+G+DA N Sbjct: 400 PNLRDTNAIIEYILENFSKENALISQGVCDALDHASPEYAMGGKLGIDATSKSN 453
>VGLY_JUNIN (P26313) Glycoprotein polyprotein [Contains: Glycoprotein G1;| Glycoprotein G2] Length = 485 Score = 29.3 bits (64), Expect = 5.1 Identities = 14/46 (30%), Positives = 22/46 (47%) Frame = +1 Query: 307 SWSMTMSADRASPSWYTLEQWLWSSITPSLSFSATSFITPLNHSKE 444 SWS+T S+ + +P Y LE+W+ + + LNH E Sbjct: 255 SWSLTDSSGKDTPGGYCLEEWMLVAAKMKCFGNTAVAKCNLNHDSE 300
>RPOB_FUSNN (Q8RHI6) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1184 Score = 29.3 bits (64), Expect = 5.1 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = +3 Query: 183 NALILMVDCDALEDASPVRPGKVG-LDAGPGQNIDPLLGMVEFLEHDD 323 N L +V C + + P +V +D P Q + G++ FLEHDD Sbjct: 586 NKLQGLVVCRYGHEIVEIEPERVNYMDVSPKQVVSVSAGLIPFLEHDD 633
>BLI1_CAEEL (Q09457) Cuticle collagen bli-1 (Blistered cuticle protein 1)| Length = 963 Score = 29.3 bits (64), Expect = 5.1 Identities = 13/35 (37%), Positives = 16/35 (45%) Frame = -2 Query: 331 PRSSSCSRNSTMPRRGSIFCPGPASRPTLPGLTGE 227 PR + C + S P PGP RP PG G+ Sbjct: 374 PRGNPCDQCSAQPNHCPSGPPGPRGRPGPPGFPGQ 408
>TIR2_YEAST (P33890) Cold shock-induced protein TIR2 precursor (Serine-rich| protein 2) Length = 251 Score = 29.3 bits (64), Expect = 5.1 Identities = 21/69 (30%), Positives = 33/69 (47%) Frame = -2 Query: 325 SSSCSRNSTMPRRGSIFCPGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWR 146 +SS +S+ ++ A+ T+ T ASS+ + S+ SA+ SST AS Sbjct: 154 ASSSEASSSAATSSAVASSSEATSSTVASSTKAASSTKASSSAVSSAVASSTKASAISQI 213 Query: 145 SCGSCRQTS 119 S G + TS Sbjct: 214 SDGQVQATS 222
>RPOB_BORPA (Q7W2G9) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1378 Score = 29.3 bits (64), Expect = 5.1 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Frame = +3 Query: 165 AAVEDPNALIL-MVDCDALEDASPVRPGKVG-LDAGPGQNIDPLLGMVEFLEHDD 323 AA++D + +V C + PG V +D P Q + ++ FLEHDD Sbjct: 635 AALDDEGRFVDDLVACREAGETMLTAPGNVHYMDVAPSQIVSVAASLIPFLEHDD 689
>RPOB_BORBR (Q7WRD9) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1378 Score = 29.3 bits (64), Expect = 5.1 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Frame = +3 Query: 165 AAVEDPNALIL-MVDCDALEDASPVRPGKVG-LDAGPGQNIDPLLGMVEFLEHDD 323 AA++D + +V C + PG V +D P Q + ++ FLEHDD Sbjct: 635 AALDDEGRFVDDLVACREAGETMLTAPGNVHYMDVAPSQIVSVAASLIPFLEHDD 689
>RPOB_AQUAE (O67762) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1468 Score = 29.3 bits (64), Expect = 5.1 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +3 Query: 222 DASPVRPGKVG-LDAGPGQNIDPLLGMVEFLEHDD 323 D V+P +V +D P Q I P ++ FLEHDD Sbjct: 722 DIRLVKPEQVEYIDVSPRQVISPSSSLIPFLEHDD 756
>HMH2_DUGTI (Q00401) Homeobox protein DTH-2| Length = 363 Score = 29.3 bits (64), Expect = 5.1 Identities = 18/53 (33%), Positives = 32/53 (60%) Frame = +1 Query: 262 LVPDRISTPFLAWLSSWSMTMSADRASPSWYTLEQWLWSSITPSLSFSATSFI 420 L P+R STP + L+S+S S D S S+Y+ + L++ P ++ S++ F+ Sbjct: 304 LFPERKSTPTMGPLTSYSFGQSMDSIS-SFYSPDFSLYNCAHPYMAASSSYFM 355
>RPOB_TREDE (Q73JJ7) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1167 Score = 29.3 bits (64), Expect = 5.1 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = +3 Query: 201 VDCDALEDASPVRPGKVG-LDAGPGQNIDPLLGMVEFLEHDD 323 V C L D + + P + +D P Q I ++ FLEHDD Sbjct: 592 VSCRKLGDYTSISPKDIQYMDVSPKQIISVSASLIPFLEHDD 633
>PO2F3_RAT (P42571) POU domain, class 2, transcription factor 3| (Octamer-binding transcription factor 11) (Oct-11) (Transcription factor Skn-1) Length = 430 Score = 29.3 bits (64), Expect = 5.1 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = -2 Query: 307 NSTMPRRGSIFC-PGPASRPTLPGLTGEASSSASQSTMRISALGSSTAA 164 +STMP + C PG SRP+ PG ASS + +A+ S+AA Sbjct: 365 HSTMPGTVTSSCSPGNNSRPSSPGSGLHASSPTASQNNSKAAMNPSSAA 413
>RPOB_BORPE (Q7W0R9) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1370 Score = 29.3 bits (64), Expect = 5.1 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Frame = +3 Query: 165 AAVEDPNALIL-MVDCDALEDASPVRPGKVG-LDAGPGQNIDPLLGMVEFLEHDD 323 AA++D + +V C + PG V +D P Q + ++ FLEHDD Sbjct: 627 AALDDEGRFVDDLVACREAGETMLTAPGNVHYMDVAPSQIVSVAASLIPFLEHDD 681
>YDDE_ECOLI (P37757) Protein yddE (ORFB)| Length = 297 Score = 29.3 bits (64), Expect = 5.1 Identities = 21/59 (35%), Positives = 30/59 (50%) Frame = +3 Query: 234 VRPGKVGLDAGPGQNIDPLLGMVEFLEHDDERGPSIALLVHARAVVVELDHSILVLLGH 410 +RPGK D G+ P +G+VE + GP A LVH V+ D ++L + GH Sbjct: 201 IRPGKNETD---GRMFSPAIGIVEDPVTGNANGPMGAWLVHHN--VLPHDGNVLRVKGH 254
>YDDE_ECO57 (P58292) Protein yddE| Length = 297 Score = 29.3 bits (64), Expect = 5.1 Identities = 21/59 (35%), Positives = 30/59 (50%) Frame = +3 Query: 234 VRPGKVGLDAGPGQNIDPLLGMVEFLEHDDERGPSIALLVHARAVVVELDHSILVLLGH 410 +RPGK D G+ P +G+VE + GP A LVH V+ D ++L + GH Sbjct: 201 IRPGKNETD---GRMFSPAIGIVEDPVTGNANGPMGAWLVHHN--VLPHDGNVLRVKGH 254
>ARNT_MOUSE (P53762) Aryl hydrocarbon receptor nuclear translocator (ARNT| protein) (Dioxin receptor, nuclear translocator) (Hypoxia-inducible factor 1 beta) (HIF-1 beta) Length = 791 Score = 29.3 bits (64), Expect = 5.1 Identities = 31/119 (26%), Positives = 47/119 (39%), Gaps = 11/119 (9%) Frame = -2 Query: 334 GPRSSSCSRNSTMPRRGSIFCPGPA-------SRPTLPGLTGEASSSASQSTMRISALGS 176 G SS+ + +GS F P P S T P + SSSA Q +IS + Sbjct: 573 GISSSTVPATQQLFSQGSSFPPNPRPAENFRNSGLTPPVTIVQPSSSAGQILAQISRHSN 632 Query: 175 STAASLFLWRSCGSCRQTSPTIPTQSLSFTRR----ISNYTYVCSYNVRTCLXYGXASS 11 S W S + +PTQ+ + TR ++N+ S++ + ASS Sbjct: 633 PAQGSAPTWTSTSRPGFAAQQVPTQATAKTRSSQFGVNNFQTSSSFSAMSLPGAPTASS 691
>PACS1_MOUSE (Q8K212) Phosphofurin acidic cluster sorting protein 1 (PACS-1)| Length = 961 Score = 29.3 bits (64), Expect = 5.1 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = -2 Query: 271 PGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRSCGSCRQTSP 116 P +PT P L SSS+S S S+ SST+ S+ + + GS P Sbjct: 37 PPQPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGP 88
>RPOB_BURPS (Q63Q03) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1368 Score = 28.9 bits (63), Expect = 6.7 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Frame = +3 Query: 165 AAVEDPNALI-LMVDCDALEDASPVRPGKVG-LDAGPGQNIDPLLGMVEFLEHDD 323 AA+ D AL+ +V + V P ++ +D P Q + ++ FLEHDD Sbjct: 627 AAIGDDGALVDELVSSREAGETMMVTPDRIQYMDVAPSQIVSVAASLIPFLEHDD 681
>RPOB_BURP1 (Q3JMQ3) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1368 Score = 28.9 bits (63), Expect = 6.7 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Frame = +3 Query: 165 AAVEDPNALI-LMVDCDALEDASPVRPGKVG-LDAGPGQNIDPLLGMVEFLEHDD 323 AA+ D AL+ +V + V P ++ +D P Q + ++ FLEHDD Sbjct: 627 AAIGDDGALVDELVSSREAGETMMVTPDRIQYMDVAPSQIVSVAASLIPFLEHDD 681
>RPOB_BURMA (P0C151) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1368 Score = 28.9 bits (63), Expect = 6.7 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Frame = +3 Query: 165 AAVEDPNALI-LMVDCDALEDASPVRPGKVG-LDAGPGQNIDPLLGMVEFLEHDD 323 AA+ D AL+ +V + V P ++ +D P Q + ++ FLEHDD Sbjct: 627 AAIGDDGALVDELVSSREAGETMMVTPDRIQYMDVAPSQIVSVAASLIPFLEHDD 681
>CYDA_BACSU (P94364) Cytochrome d ubiquinol oxidase subunit 1 (EC 1.10.3.-)| (Cytochrome d ubiquinol oxidase subunit I) Length = 468 Score = 28.9 bits (63), Expect = 6.7 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = +1 Query: 202 LTAMRLKTLRQLGRAKWVLTLVPDRISTPFLAWLSSWSMT 321 L + L ++L +KW L ++ IS PFLA + W MT Sbjct: 346 LGGLWLNRRKKLENSKWYLRIMIALISFPFLANSAGWIMT 385
>YQ35_CAEEL (Q09456) Putative cuticle collagen C09G5.5| Length = 317 Score = 28.9 bits (63), Expect = 6.7 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 5/42 (11%) Frame = -2 Query: 334 GPRSSSCSRNSTMPR-----RGSIFCPGPASRPTLPGLTGEA 224 GP++S+C P RG PGPA +P PG+ G A Sbjct: 83 GPQASNCPAGPPGPPGASGDRGLDGQPGPAGKPGQPGVAGPA 124
>PININ_PONPY (Q5R5X0) Pinin| Length = 719 Score = 28.9 bits (63), Expect = 6.7 Identities = 24/82 (29%), Positives = 36/82 (43%) Frame = -2 Query: 328 RSSSCSRNSTMPRRGSIFCPGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLW 149 RS +RN T R +S + +G +SSS S S+ S+ SST+ S Sbjct: 563 RSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGS---- 618 Query: 148 RSCGSCRQTSPTIPTQSLSFTR 83 S R +S + + S S +R Sbjct: 619 ----SSRDSSSSTSSSSESRSR 636
>RPOB_BRAJA (Q89J74) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1372 Score = 28.9 bits (63), Expect = 6.7 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = +3 Query: 198 MVDCDALEDASPVRPGKVG-LDAGPGQNIDPLLGMVEFLEHDD 323 +V C + PV P KV +D P Q + ++ FLE+DD Sbjct: 642 LVVCRHAGEVLPVTPDKVDYMDVSPKQLVSVAAALIPFLENDD 684
>PININ_HUMAN (Q9H307) Pinin (140 kDa nuclear and cell adhesion-related| phosphoprotein) (Domain-rich serine protein) (DRS-protein) (DRSP) (Melanoma metastasis clone A protein) (Desmosome-associated protein) (SR-like protein) (Nuclear protein SDK3) Length = 717 Score = 28.9 bits (63), Expect = 6.7 Identities = 24/82 (29%), Positives = 36/82 (43%) Frame = -2 Query: 328 RSSSCSRNSTMPRRGSIFCPGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLW 149 RS +RN T R +S + +G +SSS S S+ S+ SST+ S Sbjct: 561 RSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGS---- 616 Query: 148 RSCGSCRQTSPTIPTQSLSFTR 83 S R +S + + S S +R Sbjct: 617 ----SSRDSSSSTSSSSESRSR 634
>PININ_MOUSE (O35691) Pinin| Length = 725 Score = 28.9 bits (63), Expect = 6.7 Identities = 24/82 (29%), Positives = 36/82 (43%) Frame = -2 Query: 328 RSSSCSRNSTMPRRGSIFCPGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLW 149 RS +RN T R +S + +G +SSS S S+ S+ SST+ S Sbjct: 569 RSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGS---- 624 Query: 148 RSCGSCRQTSPTIPTQSLSFTR 83 S R +S + + S S +R Sbjct: 625 ----SSRDSSSSTSSSSESRSR 642
>RPOB_NITWN (Q3SSY0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1380 Score = 28.9 bits (63), Expect = 6.7 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = +3 Query: 198 MVDCDALEDASPVRPGKVG-LDAGPGQNIDPLLGMVEFLEHDD 323 +V C + PV P KV +D P Q + ++ FLE+DD Sbjct: 647 LVVCRHAGEVLPVTPDKVDFMDVSPKQLVSVAAALIPFLENDD 689
>SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 28.5 bits (62), Expect = 8.7 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Frame = -2 Query: 328 RSSSCSRNSTMPRRGSIFCPGPA----SRPTLPGLTGEASSSASQS 203 R + RN P+ G + PGPA +RPT+P G S+ SQ+ Sbjct: 1165 RKDNIGRNQPSPQAG-LAGPGPAGYGAARPTIPARAGVISAPQSQA 1209
>Y1909_AQUAE (O67744) Hypothetical protein aq_1909| Length = 309 Score = 28.5 bits (62), Expect = 8.7 Identities = 21/86 (24%), Positives = 39/86 (45%) Frame = -1 Query: 401 KDKDGVIELHNHCSSVYQEGDARSALIVMLQELNHAKKGVDILSGTSVKTHFARPNWRSV 222 K KD ++ L +C V ++G+ L ++ N A+K +SG NW+ V Sbjct: 23 KKKDVLLYLICYCQLVRRDGEYEVELPKLI---NCAEKPYKYISG----------NWQDV 69 Query: 221 FKRIAVNHENQRVGVFYCGEPVLVAQ 144 + V + + G Y G+ +L+ + Sbjct: 70 LLELGVLYLKDKKGKVYTGKEILLVK 95
>CID_DROME (P19538) Protein cubitus interruptus| Length = 1397 Score = 28.5 bits (62), Expect = 8.7 Identities = 24/74 (32%), Positives = 34/74 (45%) Frame = -1 Query: 317 MLQELNHAKKGVDILSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLR 138 MLQ LN K + L K H A P +V + IA NH ++ ++Y + +L Sbjct: 1088 MLQYLNLVKDDTNHLE----KEHQAVPVGSNVSETIASNHYREQSNIYYTNKQILTP--- 1140 Query: 137 QLSADFTHNTNTKF 96 + D NT TKF Sbjct: 1141 PSNVDIQPNT-TKF 1153
>RPOB_RHOBA (Q7URW6) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1240 Score = 28.5 bits (62), Expect = 8.7 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Frame = +3 Query: 222 DASPVRPGKVG-LDAGPGQNIDPLLGMVEFLEHDD 323 D V P +V +D P Q + G++ FLEHDD Sbjct: 590 DFEIVMPEQVSFMDVAPAQMVGVSAGLIPFLEHDD 624
>WAPL_DROME (Q9W517) Protein wings apart-like (Protein parallel sister| chromatids) Length = 1741 Score = 28.5 bits (62), Expect = 8.7 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = -2 Query: 265 PASRPTLPGLTGEASSSASQSTMRISALGSST 170 P S P+LP T S+SAS S+ SA GS++ Sbjct: 297 PGSEPSLPPPTSAPSASASTSSQLPSASGSAS 328
>RPOB_PSYAR (Q4FQH3) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1372 Score = 28.5 bits (62), Expect = 8.7 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 16/70 (22%) Frame = +3 Query: 162 LAAVEDPNALILMVDCDALEDAS---------------PVRPGKVG-LDAGPGQNIDPLL 293 L+A+E+ +I D D + + P KV +D P Q + Sbjct: 625 LSAIEEVGTVIAQADSPVTADGALSDEMVSVRSYGEFVRMPPEKVTHMDVSPSQVVSVAA 684 Query: 294 GMVEFLEHDD 323 G++ FLEHDD Sbjct: 685 GLIPFLEHDD 694
>TRXM_PEA (P48384) Thioredoxin M-type, chloroplast precursor (TRX-M)| Length = 172 Score = 28.5 bits (62), Expect = 8.7 Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Frame = -2 Query: 184 LGSSTAASLFLWRS-CGSCRQTSPTIPTQSLSFTRRISNYTYVCSYNVRTCLXYGXAS 14 +GS T + W CG CR +P I + + +I Y + T YG S Sbjct: 82 IGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKIKCYKLNTDESPNTATKYGIRS 139
>PO2F3_HUMAN (Q9UKI9) POU domain, class 2, transcription factor 3| (Octamer-binding transcription factor 11) (Oct-11) (Transcription factor Skn-1) (PLA-1 protein) Length = 436 Score = 28.5 bits (62), Expect = 8.7 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = -2 Query: 307 NSTMPRRGSIFC-PGPASRPTLPGLTGEASS-SASQSTMRISALGSSTAASLFLW 149 +STMP + C PG SRP+ PG ASS +ASQ+ + + +S+ S W Sbjct: 372 HSTMPGTVTSSCSPGNNSRPSSPGSGLHASSPTASQNNSKAAVNSASSFNSSGSW 426
>NIFA_HERSE (P27713) Nif-specific regulatory protein| Length = 542 Score = 28.5 bits (62), Expect = 8.7 Identities = 15/53 (28%), Positives = 27/53 (50%) Frame = +1 Query: 220 KTLRQLGRAKWVLTLVPDRISTPFLAWLSSWSMTMSADRASPSWYTLEQWLWS 378 K L + G+ + V+ + +RIS P+ A + W A A+P E+ +W+ Sbjct: 454 KVLHEPGQQQPVVVVPLERISAPYGAIFAEWDGQGQATGAAPPTSERERLIWA 506
>M1_DHVI1 (Q01479) Matrix protein 1 (M1)| Length = 270 Score = 28.5 bits (62), Expect = 8.7 Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 3/58 (5%) Frame = -1 Query: 419 MNEVAE--KDKDGVIELHNHCSSVYQEGDARSALIVMLQELNHAKKG-VDILSGTSVK 255 MN V + K KDG+ E+ N+ SS+ +EG A +++L + K V++L+G S K Sbjct: 85 MNSVKKGYKAKDGLQEISNYISSLDREGKQVLACMLILSTQSIGKTVLVELLAGISGK 142
>ALG3_YEAST (P38179) Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl| mannosyltransferase (EC 2.4.1.-) (Dol-P-Man-dependent alpha(1-3)-mannosyltransferase) (HM-1 killer toxin resistance protein) Length = 458 Score = 28.5 bits (62), Expect = 8.7 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +1 Query: 343 PSWYTLEQWLWSSITPSLSFSATSFITPLN 432 P WY L +W W+S P + A++ + LN Sbjct: 397 PIWYVLHEWCWNSYPP--NSQASTLLLALN 424
>CPSM_RANCA (Q91293) Carbamoyl-phosphate synthase [ammonia], mitochondrial| precursor (EC 6.3.4.16) (Carbamoyl-phosphate synthetase I) (CPSase I) Length = 1496 Score = 28.5 bits (62), Expect = 8.7 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +1 Query: 193 FSWLTAMRLKTLRQLGRAKWVLTLVPDRISTPF 291 F W ++TLR +G+ V+ P+ +ST F Sbjct: 989 FDWCAVSSIRTLRHVGKKTVVVNCNPETVSTDF 1021 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,953,822 Number of Sequences: 219361 Number of extensions: 1293133 Number of successful extensions: 6106 Number of sequences better than 10.0: 95 Number of HSP's better than 10.0 without gapping: 5329 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6035 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
