| Clone Name | rbags28a12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009144.1| Triticum aestivum clone wl1n.pk0054.d8:fis, full insert mRNA sequence Length = 876 Score = 278 bits (140), Expect = 2e-71 Identities = 308/364 (84%) Strand = Plus / Minus Query: 71 attagaaattctccttgtgaaactcaaactttgtgttggtattgtgggtgaagtctgccg 130 ||||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||| | Sbjct: 575 attagaagttctccttgtggaactcaaactttgtgttcgtcttgtgggtgaagtctgctg 516 Query: 131 acaactgccgcagctgcgccacaagaacaggctcgccgcagtagaagaccccaacgcgct 190 || ||||||| ||||| | |||||| |||||||| ||||||||||| || |||||||| | Sbjct: 515 accactgccgtagctgtggcacaaggacaggctcaccgcagtagaaaactccaacgcgtt 456 Query: 191 gattctcatggttgactgcgatgcgcttgaagacgcttcgccagttaggccgggcaaagt 250 | ||||||||||| ||||| | | ||||||||||||||||| || || || || |||| Sbjct: 455 ggttctcatggttcactgcaacatgtttgaagacgcttcgccaattgggacgcgcgaagt 396 Query: 251 gggtcttgacgctggtcccggacagaatatcgacccccttcttggcatggttgagttcct 310 | |||||||| || || || |||| || |||||||| ||||| ||||| | ||| || | Sbjct: 395 gcgtcttgacactagttccagacaagatgtcgacccctttcttcgcatgctggagctctt 336 Query: 311 ggagcatgacgatgagcgcggaccgagcatcgccctcttggtacacgctcgagcagtggt 370 |||||||||| ||||| || || || ||||| || || | |||||| ||||||||||||| Sbjct: 335 ggagcatgacaatgagtgcagaacgtgcatccccttcctcgtacacactcgagcagtggt 276 Query: 371 tgtggagctcgatcactccatccttgtccttctcggccacctcgttcatcacccctctga 430 ||||||| || || |||||||||||||||||||| |||||||||||||| ||||||| || Sbjct: 275 tgtggagttcaatgactccatccttgtccttctcagccacctcgttcatgacccctcgga 216 Query: 431 acca 434 |||| Sbjct: 215 acca 212
>gb|AY603975.1| Oryza sativa (indica cultivar-group) respiratory burst oxidase protein B (rbohB) mRNA, complete cds Length = 3334 Score = 250 bits (126), Expect = 3e-63 Identities = 318/382 (83%) Strand = Plus / Minus Query: 71 attagaaattctccttgtgaaactcaaactttgtgttggtattgtgggtgaagtctgccg 130 ||||||| ||||||||||| || ||||| ||||||| || ||||||||||| ||||| | Sbjct: 3014 attagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctg 2955 Query: 131 acaactgccgcagctgcgccacaagaacaggctcgccgcagtagaagaccccaacgcgct 190 ||||||||| || || | || || |||||||| || |||||||| || || ||||||| Sbjct: 2954 acaactgccttagttggggaaccagcacaggctcaccacagtagaacacaccgacgcgct 2895 Query: 191 gattctcatggttgactgcgatgcgcttgaagacgcttcgccagttaggccgggcaaagt 250 | ||||||||| |||| || | |||||||||||||||||| ||||| || || || | Sbjct: 2894 ggttctcatggctgaccgcaaccttcttgaagacgcttcgccaattaggtcgtgcgaaat 2835 Query: 251 gggtcttgacgctggtcccggacagaatatcgacccccttcttggcatggttgagttcct 310 ||||||| || || || || |||| |||||||| |||||||| ||||| | ||||| | Sbjct: 2834 gggtcttcacactagttcccgacaagatatcgacgcccttcttcgcatgctgaagttctt 2775 Query: 311 ggagcatgacgatgagcgcggaccgagcatcgccctcttggtacacgctcgagcagtggt 370 |||||||||| ||||| || || ||||||||||| || ||||||||||| |||||||||| Sbjct: 2774 ggagcatgacaatgagagcagaacgagcatcgccttcctggtacacgcttgagcagtggt 2715 Query: 371 tgtggagctcgatcactccatccttgtccttctcggccacctcgttcatcacccctctga 430 | |||||||| || |||||||||||||||||||| | |||||||||||| || ||||||| Sbjct: 2714 tatggagctcaatgactccatccttgtccttctcagacacctcgttcatgacgcctctga 2655 Query: 431 accactcaaaggagccttcctc 452 |||||||||| ||||| ||||| Sbjct: 2654 accactcaaacgagccctcctc 2633
>dbj|AK121916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106C16, full insert sequence Length = 3255 Score = 250 bits (126), Expect = 3e-63 Identities = 318/382 (83%) Strand = Plus / Minus Query: 71 attagaaattctccttgtgaaactcaaactttgtgttggtattgtgggtgaagtctgccg 130 ||||||| ||||||||||| || ||||| ||||||| || ||||||||||| ||||| | Sbjct: 3087 attagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctg 3028 Query: 131 acaactgccgcagctgcgccacaagaacaggctcgccgcagtagaagaccccaacgcgct 190 ||||||||| || || | || || |||||||| || |||||||| || || ||||||| Sbjct: 3027 acaactgccttagttggggaaccagcacaggctcaccacagtagaacacaccgacgcgct 2968 Query: 191 gattctcatggttgactgcgatgcgcttgaagacgcttcgccagttaggccgggcaaagt 250 | ||||||||| |||| || | |||||||||||||||||| ||||| || || || | Sbjct: 2967 ggttctcatggctgaccgcaaccttcttgaagacgcttcgccaattaggtcgtgcgaaat 2908 Query: 251 gggtcttgacgctggtcccggacagaatatcgacccccttcttggcatggttgagttcct 310 ||||||| || || || || |||| |||||||| |||||||| ||||| | ||||| | Sbjct: 2907 gggtcttcacactagttcccgacaagatatcgacgcccttcttcgcatgctgaagttctt 2848 Query: 311 ggagcatgacgatgagcgcggaccgagcatcgccctcttggtacacgctcgagcagtggt 370 |||||||||| ||||| || || ||||||||||| || ||||||||||| |||||||||| Sbjct: 2847 ggagcatgacaatgagagcagaacgagcatcgccttcctggtacacgcttgagcagtggt 2788 Query: 371 tgtggagctcgatcactccatccttgtccttctcggccacctcgttcatcacccctctga 430 | |||||||| || |||||||||||||||||||| | |||||||||||| || ||||||| Sbjct: 2787 tatggagctcaatgactccatccttgtccttctcagacacctcgttcatgacgcctctga 2728 Query: 431 accactcaaaggagccttcctc 452 |||||||||| ||||| ||||| Sbjct: 2727 accactcaaacgagccctcctc 2706
>dbj|AK099714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084G19, full insert sequence Length = 3731 Score = 250 bits (126), Expect = 3e-63 Identities = 318/382 (83%) Strand = Plus / Minus Query: 71 attagaaattctccttgtgaaactcaaactttgtgttggtattgtgggtgaagtctgccg 130 ||||||| ||||||||||| || ||||| ||||||| || ||||||||||| ||||| | Sbjct: 3606 attagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctg 3547 Query: 131 acaactgccgcagctgcgccacaagaacaggctcgccgcagtagaagaccccaacgcgct 190 ||||||||| || || | || || |||||||| || |||||||| || || ||||||| Sbjct: 3546 acaactgccttagttggggaaccagcacaggctcaccacagtagaacacaccgacgcgct 3487 Query: 191 gattctcatggttgactgcgatgcgcttgaagacgcttcgccagttaggccgggcaaagt 250 | ||||||||| |||| || | |||||||||||||||||| ||||| || || || | Sbjct: 3486 ggttctcatggctgaccgcaaccttcttgaagacgcttcgccaattaggtcgtgcgaaat 3427 Query: 251 gggtcttgacgctggtcccggacagaatatcgacccccttcttggcatggttgagttcct 310 ||||||| || || || || |||| |||||||| |||||||| ||||| | ||||| | Sbjct: 3426 gggtcttcacactagttcccgacaagatatcgacgcccttcttcgcatgctgaagttctt 3367 Query: 311 ggagcatgacgatgagcgcggaccgagcatcgccctcttggtacacgctcgagcagtggt 370 |||||||||| ||||| || || ||||||||||| || ||||||||||| |||||||||| Sbjct: 3366 ggagcatgacaatgagagcagaacgagcatcgccttcctggtacacgcttgagcagtggt 3307 Query: 371 tgtggagctcgatcactccatccttgtccttctcggccacctcgttcatcacccctctga 430 | |||||||| || |||||||||||||||||||| | |||||||||||| || ||||||| Sbjct: 3306 tatggagctcaatgactccatccttgtccttctcagacacctcgttcatgacgcctctga 3247 Query: 431 accactcaaaggagccttcctc 452 |||||||||| ||||| ||||| Sbjct: 3246 accactcaaacgagccctcctc 3225
>dbj|AK065117.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O12, full insert sequence Length = 3198 Score = 250 bits (126), Expect = 3e-63 Identities = 318/382 (83%) Strand = Plus / Minus Query: 71 attagaaattctccttgtgaaactcaaactttgtgttggtattgtgggtgaagtctgccg 130 ||||||| ||||||||||| || ||||| ||||||| || ||||||||||| ||||| | Sbjct: 3090 attagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctg 3031 Query: 131 acaactgccgcagctgcgccacaagaacaggctcgccgcagtagaagaccccaacgcgct 190 ||||||||| || || | || || |||||||| || |||||||| || || ||||||| Sbjct: 3030 acaactgccttagttggggaaccagcacaggctcaccacagtagaacacaccgacgcgct 2971 Query: 191 gattctcatggttgactgcgatgcgcttgaagacgcttcgccagttaggccgggcaaagt 250 | ||||||||| |||| || | |||||||||||||||||| ||||| || || || | Sbjct: 2970 ggttctcatggctgaccgcaaccttcttgaagacgcttcgccaattaggtcgtgcgaaat 2911 Query: 251 gggtcttgacgctggtcccggacagaatatcgacccccttcttggcatggttgagttcct 310 ||||||| || || || || |||| |||||||| |||||||| ||||| | ||||| | Sbjct: 2910 gggtcttcacactagttcccgacaagatatcgacgcccttcttcgcatgctgaagttctt 2851 Query: 311 ggagcatgacgatgagcgcggaccgagcatcgccctcttggtacacgctcgagcagtggt 370 |||||||||| ||||| || || ||||||||||| || ||||||||||| |||||||||| Sbjct: 2850 ggagcatgacaatgagagcagaacgagcatcgccttcctggtacacgcttgagcagtggt 2791 Query: 371 tgtggagctcgatcactccatccttgtccttctcggccacctcgttcatcacccctctga 430 | |||||||| || |||||||||||||||||||| | |||||||||||| || ||||||| Sbjct: 2790 tatggagctcaatgactccatccttgtccttctcagacacctcgttcatgacgcctctga 2731 Query: 431 accactcaaaggagccttcctc 452 |||||||||| ||||| ||||| Sbjct: 2730 accactcaaacgagccctcctc 2709
>dbj|AK060770.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B03, full insert sequence Length = 2978 Score = 250 bits (126), Expect = 3e-63 Identities = 318/382 (83%) Strand = Plus / Minus Query: 71 attagaaattctccttgtgaaactcaaactttgtgttggtattgtgggtgaagtctgccg 130 ||||||| ||||||||||| || ||||| ||||||| || ||||||||||| ||||| | Sbjct: 2727 attagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctg 2668 Query: 131 acaactgccgcagctgcgccacaagaacaggctcgccgcagtagaagaccccaacgcgct 190 ||||||||| || || | || || |||||||| || |||||||| || || ||||||| Sbjct: 2667 acaactgccttagttggggaaccagcacaggctcaccacagtagaacacaccgacgcgct 2608 Query: 191 gattctcatggttgactgcgatgcgcttgaagacgcttcgccagttaggccgggcaaagt 250 | ||||||||| |||| || | |||||||||||||||||| ||||| || || || | Sbjct: 2607 ggttctcatggctgaccgcaaccttcttgaagacgcttcgccaattaggtcgtgcgaaat 2548 Query: 251 gggtcttgacgctggtcccggacagaatatcgacccccttcttggcatggttgagttcct 310 ||||||| || || || || |||| |||||||| |||||||| ||||| | ||||| | Sbjct: 2547 gggtcttcacactagttcccgacaagatatcgacgcccttcttcgcatgctgaagttctt 2488 Query: 311 ggagcatgacgatgagcgcggaccgagcatcgccctcttggtacacgctcgagcagtggt 370 |||||||||| ||||| || || ||||||||||| || ||||||||||| |||||||||| Sbjct: 2487 ggagcatgacaatgagagcagaacgagcatcgccttcctggtacacgcttgagcagtggt 2428 Query: 371 tgtggagctcgatcactccatccttgtccttctcggccacctcgttcatcacccctctga 430 | |||||||| || |||||||||||||||||||| | |||||||||||| || ||||||| Sbjct: 2427 tatggagctcaatgactccatccttgtccttctcagacacctcgttcatgacgcctctga 2368 Query: 431 accactcaaaggagccttcctc 452 |||||||||| ||||| ||||| Sbjct: 2367 accactcaaacgagccctcctc 2346
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 200 bits (101), Expect = 3e-48 Identities = 203/237 (85%) Strand = Plus / Plus Query: 216 cttgaagacgcttcgccagttaggccgggcaaagtgggtcttgacgctggtcccggacag 275 |||||||||||||||||| ||||| || || || |||||||| || || || || |||| Sbjct: 14604726 cttgaagacgcttcgccaattaggtcgtgcgaaatgggtcttcacactagttcccgacaa 14604785 Query: 276 aatatcgacccccttcttggcatggttgagttcctggagcatgacgatgagcgcggaccg 335 |||||||| |||||||| ||||| | ||||| ||||||||||| ||||| || || || Sbjct: 14604786 gatatcgacgcccttcttcgcatgctgaagttcttggagcatgacaatgagagcagaacg 14604845 Query: 336 agcatcgccctcttggtacacgctcgagcagtggttgtggagctcgatcactccatcctt 395 ||||||||| || ||||||||||| ||||||||||| |||||||| || ||||||||||| Sbjct: 14604846 agcatcgccttcctggtacacgcttgagcagtggttatggagctcaatgactccatcctt 14604905 Query: 396 gtccttctcggccacctcgttcatcacccctctgaaccactcaaaggagccttcctc 452 ||||||||| | |||||||||||| || ||||||||||||||||| ||||| ||||| Sbjct: 14604906 gtccttctcagacacctcgttcatgacgcctctgaaccactcaaacgagccctcctc 14604962 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 71 attagaaattctccttgtgaaactcaaactttgtgttggtattgtgggtgaagtctgccg 130 ||||||| ||||||||||| || ||||| ||||||| || ||||||||||| ||||| | Sbjct: 14604498 attagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctg 14604557 Query: 131 acaactgcc 139 ||||||||| Sbjct: 14604558 acaactgcc 14604566
>dbj|AP003444.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1164G11 Length = 142699 Score = 200 bits (101), Expect = 3e-48 Identities = 203/237 (85%) Strand = Plus / Plus Query: 216 cttgaagacgcttcgccagttaggccgggcaaagtgggtcttgacgctggtcccggacag 275 |||||||||||||||||| ||||| || || || |||||||| || || || || |||| Sbjct: 86103 cttgaagacgcttcgccaattaggtcgtgcgaaatgggtcttcacactagttcccgacaa 86162 Query: 276 aatatcgacccccttcttggcatggttgagttcctggagcatgacgatgagcgcggaccg 335 |||||||| |||||||| ||||| | ||||| ||||||||||| ||||| || || || Sbjct: 86163 gatatcgacgcccttcttcgcatgctgaagttcttggagcatgacaatgagagcagaacg 86222 Query: 336 agcatcgccctcttggtacacgctcgagcagtggttgtggagctcgatcactccatcctt 395 ||||||||| || ||||||||||| ||||||||||| |||||||| || ||||||||||| Sbjct: 86223 agcatcgccttcctggtacacgcttgagcagtggttatggagctcaatgactccatcctt 86282 Query: 396 gtccttctcggccacctcgttcatcacccctctgaaccactcaaaggagccttcctc 452 ||||||||| | |||||||||||| || ||||||||||||||||| ||||| ||||| Sbjct: 86283 gtccttctcagacacctcgttcatgacgcctctgaaccactcaaacgagccctcctc 86339 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 71 attagaaattctccttgtgaaactcaaactttgtgttggtattgtgggtgaagtctgccg 130 ||||||| ||||||||||| || ||||| ||||||| || ||||||||||| ||||| | Sbjct: 85875 attagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctg 85934 Query: 131 acaactgcc 139 ||||||||| Sbjct: 85935 acaactgcc 85943
>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0514H03 Length = 167230 Score = 200 bits (101), Expect = 3e-48 Identities = 203/237 (85%) Strand = Plus / Plus Query: 216 cttgaagacgcttcgccagttaggccgggcaaagtgggtcttgacgctggtcccggacag 275 |||||||||||||||||| ||||| || || || |||||||| || || || || |||| Sbjct: 164039 cttgaagacgcttcgccaattaggtcgtgcgaaatgggtcttcacactagttcccgacaa 164098 Query: 276 aatatcgacccccttcttggcatggttgagttcctggagcatgacgatgagcgcggaccg 335 |||||||| |||||||| ||||| | ||||| ||||||||||| ||||| || || || Sbjct: 164099 gatatcgacgcccttcttcgcatgctgaagttcttggagcatgacaatgagagcagaacg 164158 Query: 336 agcatcgccctcttggtacacgctcgagcagtggttgtggagctcgatcactccatcctt 395 ||||||||| || ||||||||||| ||||||||||| |||||||| || ||||||||||| Sbjct: 164159 agcatcgccttcctggtacacgcttgagcagtggttatggagctcaatgactccatcctt 164218 Query: 396 gtccttctcggccacctcgttcatcacccctctgaaccactcaaaggagccttcctc 452 ||||||||| | |||||||||||| || ||||||||||||||||| ||||| ||||| Sbjct: 164219 gtccttctcagacacctcgttcatgacgcctctgaaccactcaaacgagccctcctc 164275 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 71 attagaaattctccttgtgaaactcaaactttgtgttggtattgtgggtgaagtctgccg 130 ||||||| ||||||||||| || ||||| ||||||| || ||||||||||| ||||| | Sbjct: 163811 attagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctg 163870 Query: 131 acaactgcc 139 ||||||||| Sbjct: 163871 acaactgcc 163879
>gb|AY107147.1| Zea mays PCO125081 mRNA sequence Length = 938 Score = 200 bits (101), Expect = 3e-48 Identities = 299/365 (81%) Strand = Plus / Minus Query: 79 ttctccttgtgaaactcaaactttgtgttggtattgtgggtgaagtctgccgacaactgc 138 ||||||||||| ||||| ||||| || || || |||||||||||||| || |||| |||| Sbjct: 638 ttctccttgtggaactcgaacttagtatttgtcttgtgggtgaagtccgctgacagctgc 579 Query: 139 cgcagctgcgccacaagaacaggctcgccgcagtagaagaccccaacgcgctgattctca 198 || ||||| | |||||| || ||||| || |||||||| || || | ||| || ||||| Sbjct: 578 cgtagctgtggcacaaggacgggctcaccacagtagaaaactccgatgcgttggttctcg 519 Query: 199 tggttgactgcgatgcgcttgaagacgcttcgccagttaggccgggcaaagtgggtcttg 258 ||||| ||||| | | ||||||||||||||||| || ||||| ||||| || |||||| Sbjct: 518 tggttcactgcaacatgtttgaagacgcttcgccaattcggccgtgcaaaatgcgtcttg 459 Query: 259 acgctggtcccggacagaatatcgacccccttcttggcatggttgagttcctggagcatg 318 || || || || |||| || ||||| |||||||| || || | ||| |||||||||||| Sbjct: 458 acactagttccagacaagatgtcgactcccttcttcgcgtgctggagctcctggagcatg 399 Query: 319 acgatgagcgcggaccgagcatcgccctcttggtacacgctcgagcagtggttgtggagc 378 || ||||| || || || |||| || || |||| ||| |||||||||||||||||||| Sbjct: 398 acaatgagggcagaacgtacatccccttcctggtgcacactcgagcagtggttgtggagt 339 Query: 379 tcgatcactccatccttgtccttctcggccacctcgttcatcacccctctgaaccactca 438 || || |||||||||||||||||||| |||||||| ||||| ||||||| |||||| ||| Sbjct: 338 tcaatgactccatccttgtccttctcagccacctcattcatgacccctcggaaccattca 279 Query: 439 aagga 443 ||||| Sbjct: 278 aagga 274
>gb|BT009119.1| Triticum aestivum clone wl1n.pk0005.c8:fis, full insert mRNA sequence Length = 543 Score = 163 bits (82), Expect = 6e-37 Identities = 226/274 (82%) Strand = Plus / Minus Query: 164 cgccgcagtagaagaccccaacgcgctgattctcatggttgactgcgatgcgcttgaaga 223 ||||||||||||| || || |||||||| |||| ||||||| |||||||||||| ||| Sbjct: 285 cgccgcagtagaacactccgacgcgctggttctggtggttgagcgcgatgcgcttgtaga 226 Query: 224 cgcttcgccagttaggccgggcaaagtgggtcttgacgctggtcccggacagaatatcga 283 || | ||||||||||||| ||| |||||||||||||||| ||| ||||||| | |||| Sbjct: 225 cgttgcgccagttaggcctggcgaagtgggtcttgacgcgggtgccggacaccacgtcga 166 Query: 284 cccccttcttggcatggttgagttcctggagcatgacgatgagcgcggaccgagcatcgc 343 | || | |||||| |||||||| |||||||||| |||||||||||||||| || || | Sbjct: 165 cgccgtgcttggcgtggttgagcgactggagcatggcgatgagcgcggaccgggcgtccc 106 Query: 344 cctcttggtacacgctcgagcagtggttgtggagctcgatcactccatccttgtccttct 403 | || | ||||||||| | ||||| |||||| |||||||| || || | | ||||| ||| Sbjct: 105 cttcctcgtacacgctggtgcagtagttgtgcagctcgatgacgcccttcctgtccgtct 46 Query: 404 cggccacctcgttcatcacccctctgaaccactc 437 | |||||||||| |||||| || | ||||||||| Sbjct: 45 ccgccacctcgtccatcacgccgcggaaccactc 12 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 73 tagaaattctccttgtgaaactcaaactttgtgttggt 110 ||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 376 tagaagttctccttgtggaactcgaacttggtgttggt 339
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08, complete sequence Length = 197156 Score = 133 bits (67), Expect = 6e-28 Identities = 196/239 (82%) Strand = Plus / Plus Query: 199 tggttgactgcgatgcgcttgaagacgcttcgccagttaggccgggcaaagtgggtcttg 258 ||||||| |||||||||||| ||||| | |||||||| || ||||| |||||||||||| Sbjct: 189602 tggttgagggcgatgcgcttgtagacgttgcgccagttggggcgggcgaagtgggtcttg 189661 Query: 259 acgctggtcccggacagaatatcgacccccttcttggcatggttgagttcctggagcatg 318 |||| ||| ||||| | | ||||| || | |||||| |||||||| ||||||||| Sbjct: 189662 acgcgggtgccggagacgacgtcgacgccgtgcttggcgtggttgagcgactggagcata 189721 Query: 319 acgatgagcgcggaccgagcatcgccctcttggtacacgctcgagcagtggttgtggagc 378 |||||||||| ||||| || || || || | ||||||||| | ||||| |||||| ||| Sbjct: 189722 gcgatgagcgccgaccgggcgtccccttcctcgtacacgctggtgcagtagttgtgcagc 189781 Query: 379 tcgatcactccatccttgtccttctcggccacctcgttcatcacccctctgaaccactc 437 |||||||| || | ||||||| |||| |||||||||| ||||||||| | ||||||||| Sbjct: 189782 tcgatcacccccttcttgtccgtctccgccacctcgtccatcaccccccggaaccactc 189840
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 133 bits (67), Expect = 6e-28 Identities = 196/239 (82%) Strand = Plus / Plus Query: 199 tggttgactgcgatgcgcttgaagacgcttcgccagttaggccgggcaaagtgggtcttg 258 ||||||| |||||||||||| ||||| | |||||||| || ||||| |||||||||||| Sbjct: 28957 tggttgagggcgatgcgcttgtagacgttgcgccagttggggcgggcgaagtgggtcttg 29016 Query: 259 acgctggtcccggacagaatatcgacccccttcttggcatggttgagttcctggagcatg 318 |||| ||| ||||| | | ||||| || | |||||| |||||||| ||||||||| Sbjct: 29017 acgcgggtgccggagacgacgtcgacgccgtgcttggcgtggttgagcgactggagcata 29076 Query: 319 acgatgagcgcggaccgagcatcgccctcttggtacacgctcgagcagtggttgtggagc 378 |||||||||| ||||| || || || || | ||||||||| | ||||| |||||| ||| Sbjct: 29077 gcgatgagcgccgaccgggcgtccccttcctcgtacacgctggtgcagtagttgtgcagc 29136 Query: 379 tcgatcactccatccttgtccttctcggccacctcgttcatcacccctctgaaccactc 437 |||||||| || | ||||||| |||| |||||||||| ||||||||| | ||||||||| Sbjct: 29137 tcgatcacccccttcttgtccgtctccgccacctcgtccatcaccccccggaaccactc 29195
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 133 bits (67), Expect = 6e-28 Identities = 196/239 (82%) Strand = Plus / Plus Query: 199 tggttgactgcgatgcgcttgaagacgcttcgccagttaggccgggcaaagtgggtcttg 258 ||||||| |||||||||||| ||||| | |||||||| || ||||| |||||||||||| Sbjct: 18925586 tggttgagggcgatgcgcttgtagacgttgcgccagttggggcgggcgaagtgggtcttg 18925645 Query: 259 acgctggtcccggacagaatatcgacccccttcttggcatggttgagttcctggagcatg 318 |||| ||| ||||| | | ||||| || | |||||| |||||||| ||||||||| Sbjct: 18925646 acgcgggtgccggagacgacgtcgacgccgtgcttggcgtggttgagcgactggagcata 18925705 Query: 319 acgatgagcgcggaccgagcatcgccctcttggtacacgctcgagcagtggttgtggagc 378 |||||||||| ||||| || || || || | ||||||||| | ||||| |||||| ||| Sbjct: 18925706 gcgatgagcgccgaccgggcgtccccttcctcgtacacgctggtgcagtagttgtgcagc 18925765 Query: 379 tcgatcactccatccttgtccttctcggccacctcgttcatcacccctctgaaccactc 437 |||||||| || | ||||||| |||| |||||||||| ||||||||| | ||||||||| Sbjct: 18925766 tcgatcacccccttcttgtccgtctccgccacctcgtccatcaccccccggaaccactc 18925824 Score = 46.1 bits (23), Expect = 0.10 Identities = 44/51 (86%) Strand = Plus / Plus Query: 390 atccttgtccttctcggccacctcgttcatcacccctctgaaccactcaaa 440 |||||||||| | || || ||||| |||||||| ||| ||||||||||||| Sbjct: 21284692 atccttgtccatttcagcaacctcattcatcactcctttgaaccactcaaa 21284742
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 133 bits (67), Expect = 6e-28 Identities = 196/239 (82%) Strand = Plus / Plus Query: 199 tggttgactgcgatgcgcttgaagacgcttcgccagttaggccgggcaaagtgggtcttg 258 ||||||| |||||||||||| ||||| | |||||||| || ||||| |||||||||||| Sbjct: 19084408 tggttgagggcgatgcgcttgtagacgttgcgccagttggggcgggcgaagtgggtcttg 19084467 Query: 259 acgctggtcccggacagaatatcgacccccttcttggcatggttgagttcctggagcatg 318 |||| ||| ||||| | | ||||| || | |||||| |||||||| ||||||||| Sbjct: 19084468 acgcgggtgccggagacgacgtcgacgccgtgcttggcgtggttgagcgactggagcata 19084527 Query: 319 acgatgagcgcggaccgagcatcgccctcttggtacacgctcgagcagtggttgtggagc 378 |||||||||| ||||| || || || || | ||||||||| | ||||| |||||| ||| Sbjct: 19084528 gcgatgagcgccgaccgggcgtccccttcctcgtacacgctggtgcagtagttgtgcagc 19084587 Query: 379 tcgatcactccatccttgtccttctcggccacctcgttcatcacccctctgaaccactc 437 |||||||| || | ||||||| |||| |||||||||| ||||||||| | ||||||||| Sbjct: 19084588 tcgatcacccccttcttgtccgtctccgccacctcgtccatcaccccccggaaccactc 19084646 Score = 46.1 bits (23), Expect = 0.10 Identities = 44/51 (86%) Strand = Plus / Plus Query: 390 atccttgtccttctcggccacctcgttcatcacccctctgaaccactcaaa 440 |||||||||| | || || ||||| |||||||| ||| ||||||||||||| Sbjct: 21594891 atccttgtccatttcagcaacctcattcatcactcctttgaaccactcaaa 21594941
>gb|BT009400.1| Triticum aestivum clone wlm96.pk044.g9:fis, full insert mRNA sequence Length = 1993 Score = 103 bits (52), Expect = 5e-19 Identities = 205/256 (80%) Strand = Plus / Minus Query: 199 tggttgactgcgatgcgcttgaagacgcttcgccagttaggccgggcaaagtgggtcttg 258 ||||||| ||||| |||||| ||||| | |||||||| || || ||||||||||||||| Sbjct: 1630 tggttgagggcgatacgcttgtagacgttgcgccagtttggtcgcgcaaagtgggtcttg 1571 Query: 259 acgctggtcccggacagaatatcgacccccttcttggcatggttgagttcctggagcatg 318 || | ||| ||||| | || ||||| || ||||||||||||||||| |||||||||| Sbjct: 1570 acacgggtgccggagacgatgtcgacgccgttcttggcatggttgagggactggagcatg 1511 Query: 319 acgatgagcgcggaccgagcatcgccctcttggtacacgctcgagcagtggttgtggagc 378 |||||||||||||||| || || || || | ||| || || | ||||| ||| |||||| Sbjct: 1510 gcgatgagcgcggaccgggcgtccccgtcctcgtagacactggtgcagtagttatggagc 1451 Query: 379 tcgatcactccatccttgtccttctcggccacctcgttcatcacccctctgaaccactca 438 ||||| || | | ||||||| ||| || | ||||| ||| || || | ||||||||| Sbjct: 1450 tcgatgacactcttcttgtccgactcagctatctcgtccatgacgccccggaaccactcg 1391 Query: 439 aaggagccttcctccc 454 |||||||||| ||||| Sbjct: 1390 aaggagccttgctccc 1375 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 76 aaattctccttgtgaaactcaaactttgtgtt 107 |||||||||||||| ||||| || |||||||| Sbjct: 1753 aaattctccttgtggaactcgaattttgtgtt 1722
>dbj|AP006409.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT25E08, TM0299, complete sequence Length = 109465 Score = 69.9 bits (35), Expect = 7e-09 Identities = 95/115 (82%) Strand = Plus / Minus Query: 334 cgagcatcgccctcttggtacacgctcgagcagtggttgtggagctcgatcactccatcc 393 |||||||| || |||| |||||||| | ||| | |||||| ||||| || || || ||| Sbjct: 16255 cgagcatctccttcttcatacacgcttgtgcaatagttgtgcagctcaattaccccttcc 16196 Query: 394 ttgtccttctcggccacctcgttcatcacccctctgaaccactcaaaggagcctt 448 ||||| ||||| || |||||||||||||||||| | ||||| |||||||| |||| Sbjct: 16195 ttgtcgttctccgctacctcgttcatcacccctttaaaccattcaaaggaacctt 16141
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 325 agcgcggaccgagcatcgccctcttggtacacgctcgagcagtggttgtggagctcgatc 384 ||||| ||||| || || ||||| | ||||||||| | |||||||||||||||||||||| Sbjct: 21686770 agcgccgaccgcgcgtccccctcctcgtacacgctggtgcagtggttgtggagctcgatc 21686711 Query: 385 a 385 | Sbjct: 21686710 a 21686710 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 403 tcggccacctcgttcatcacccctctgaaccactcaaaggagccttcctccc 454 |||||||||||||||||||| || | ||||||||| || ||||| ||||||| Sbjct: 21686689 tcggccacctcgttcatcacgccgcggaaccactcgaacgagccctcctccc 21686638
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 325 agcgcggaccgagcatcgccctcttggtacacgctcgagcagtggttgtggagctcgatc 384 ||||| ||||| || || ||||| | ||||||||| | |||||||||||||||||||||| Sbjct: 21615115 agcgccgaccgcgcgtccccctcctcgtacacgctggtgcagtggttgtggagctcgatc 21615056 Query: 385 a 385 | Sbjct: 21615055 a 21615055 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 403 tcggccacctcgttcatcacccctctgaaccactcaaaggagccttcctccc 454 |||||||||||||||||||| || | ||||||||| || ||||| ||||||| Sbjct: 21615034 tcggccacctcgttcatcacgccgcggaaccactcgaacgagccctcctccc 21614983
>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 186030 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 325 agcgcggaccgagcatcgccctcttggtacacgctcgagcagtggttgtggagctcgatc 384 ||||| ||||| || || ||||| | ||||||||| | |||||||||||||||||||||| Sbjct: 125781 agcgccgaccgcgcgtccccctcctcgtacacgctggtgcagtggttgtggagctcgatc 125840 Query: 385 a 385 | Sbjct: 125841 a 125841 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 403 tcggccacctcgttcatcacccctctgaaccactcaaaggagccttcctccc 454 |||||||||||||||||||| || | ||||||||| || ||||| ||||||| Sbjct: 125862 tcggccacctcgttcatcacgccgcggaaccactcgaacgagccctcctccc 125913
>ref|NM_202070.1| Arabidopsis thaliana ATRBOHB; calcium ion binding / oxidoreductase AT1G09090 (ATRBOHB) transcript variant AT1G09090.2 mRNA, complete cds Length = 2627 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 169 cagtagaagaccccaacgcgctgattctcatggttgactgcgatgcgcttgaagacgctt 228 |||||||| |||||||| || ||||| | ||||||||||||| | |||||||||| || Sbjct: 2439 cagtagaaaaccccaactcgttgattgacgtggttgactgcgacgtgcttgaagacacta 2380 Query: 229 cgcca 233 ||||| Sbjct: 2379 cgcca 2375 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 73 tagaaattctccttgtgaaactcaaactt 101 |||||||| |||||||| ||||||||||| Sbjct: 2535 tagaaattttccttgtggaactcaaactt 2507
>ref|NM_100780.3| Arabidopsis thaliana ATRBOHB; calcium ion binding / oxidoreductase AT1G09090 (ATRBOHB) transcript variant AT1G09090.1 mRNA, complete cds Length = 2701 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 169 cagtagaagaccccaacgcgctgattctcatggttgactgcgatgcgcttgaagacgctt 228 |||||||| |||||||| || ||||| | ||||||||||||| | |||||||||| || Sbjct: 2513 cagtagaaaaccccaactcgttgattgacgtggttgactgcgacgtgcttgaagacacta 2454 Query: 229 cgcca 233 ||||| Sbjct: 2453 cgcca 2449 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 73 tagaaattctccttgtgaaactcaaactt 101 |||||||| |||||||| ||||||||||| Sbjct: 2609 tagaaattttccttgtggaactcaaactt 2581
>emb|BX816700.1|CNS0ADX6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH63ZH03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2590 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 169 cagtagaagaccccaacgcgctgattctcatggttgactgcgatgcgcttgaagacgctt 228 |||||||| |||||||| || ||||| | ||||||||||||| | |||||||||| || Sbjct: 2422 cagtagaaaaccccaactcgttgattgacgtggttgactgcgacgtgcttgaagacacta 2363 Query: 229 cgcca 233 ||||| Sbjct: 2362 cgcca 2358
>gb|BT005716.1| Arabidopsis thaliana clone RAFL14-97-K04 (R20129) putative respiratory burst oxidase protein B (At1g09090) mRNA, complete cds Length = 2721 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 169 cagtagaagaccccaacgcgctgattctcatggttgactgcgatgcgcttgaagacgctt 228 |||||||| |||||||| || ||||| | ||||||||||||| | |||||||||| || Sbjct: 2514 cagtagaaaaccccaactcgttgattgacgtggttgactgcgacgtgcttgaagacacta 2455 Query: 229 cgcca 233 ||||| Sbjct: 2454 cgcca 2450 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 73 tagaaattctccttgtgaaactcaaactt 101 |||||||| |||||||| ||||||||||| Sbjct: 2610 tagaaattttccttgtggaactcaaactt 2582
>gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1187_E11, complete sequence Length = 133352 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 72 ttagaaattctccttgtgaaactcaaactttg 103 |||||||| |||||||||||||||||| |||| Sbjct: 56224 ttagaaatgctccttgtgaaactcaaattttg 56255
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 72 ttagaaattctccttgtgaaactcaaactttg 103 |||||||| |||||||||||||||||| |||| Sbjct: 26031463 ttagaaatgctccttgtgaaactcaaattttg 26031494
>dbj|AK120905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031D09, full insert sequence Length = 3489 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 72 ttagaaattctccttgtgaaactcaaactttg 103 |||||||| |||||||||||||||||| |||| Sbjct: 2945 ttagaaatgctccttgtgaaactcaaattttg 2914
>gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0480H08, complete sequence Length = 156301 Score = 46.1 bits (23), Expect = 0.10 Identities = 44/51 (86%) Strand = Plus / Plus Query: 390 atccttgtccttctcggccacctcgttcatcacccctctgaaccactcaaa 440 |||||||||| | || || ||||| |||||||| ||| ||||||||||||| Sbjct: 42164 atccttgtccatttcagcaacctcattcatcactcctttgaaccactcaaa 42214
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.10 Identities = 44/51 (86%) Strand = Plus / Plus Query: 390 atccttgtccttctcggccacctcgttcatcacccctctgaaccactcaaa 440 |||||||||| | || || ||||| |||||||| ||| ||||||||||||| Sbjct: 26201021 atccttgtccatttcagcaacctcattcatcactcctttgaaccactcaaa 26201071
>dbj|AK120739.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003N01, full insert sequence Length = 3515 Score = 46.1 bits (23), Expect = 0.10 Identities = 59/71 (83%) Strand = Plus / Minus Query: 370 ttgtggagctcgatcactccatccttgtccttctcggccacctcgttcatcacccctctg 429 ||||| ||||| ||||| || | ||||||| | || || ||||| |||||||| ||| || Sbjct: 2876 ttgtgcagctctatcacacccttcttgtccatttcagcaacctcattcatcactcctttg 2817 Query: 430 aaccactcaaa 440 ||||||||||| Sbjct: 2816 aaccactcaaa 2806
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 46.1 bits (23), Expect = 0.10 Identities = 44/51 (86%) Strand = Plus / Plus Query: 390 atccttgtccttctcggccacctcgttcatcacccctctgaaccactcaaa 440 |||||||||| | || || ||||| |||||||| ||| ||||||||||||| Sbjct: 92879 atccttgtccatttcagcaacctcattcatcactcctttgaaccactcaaa 92929
>ref|NM_105079.2| Arabidopsis thaliana ATRBOH F F; NAD(P)H oxidase AT1G64060 (ATRBOH F F) mRNA, complete cds Length = 3941 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 72 ttagaaattctccttgtgaaactcaaactt 101 |||||||| |||||||||||| |||||||| Sbjct: 3327 ttagaaatgctccttgtgaaattcaaactt 3298
>emb|CT010504.7| M.truncatula DNA sequence from clone MTH2-28A3 on chromosome 3, complete sequence Length = 114882 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 73 tagaaattctccttgtgaaactcaaa 98 |||||||||||||||||||| ||||| Sbjct: 77429 tagaaattctccttgtgaaaatcaaa 77404
>gb|AF015301.1|AF015301 Arabidopsis thaliana RbohAp108 mRNA, complete cds Length = 3973 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 72 ttagaaattctccttgtgaaactcaaactt 101 |||||||| |||||||||||| |||||||| Sbjct: 3326 ttagaaatgctccttgtgaaattcaaactt 3297
>gb|AC007764.2|AC007764 Genomic sequence for Arabidopsis thaliana BAC F22C12 from chromosome I, complete sequence Length = 111222 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 72 ttagaaattctccttgtgaaactcaaactt 101 |||||||| |||||||||||| |||||||| Sbjct: 74577 ttagaaatgctccttgtgaaattcaaactt 74606
>dbj|AB064343.1| Solanum tuberosum rboh F mRNA for respiratory burst oxidase protein F, complete cds Length = 3066 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 72 ttagaaattctccttgtgaaactcaaactt 101 |||||||| |||||||||||| |||||||| Sbjct: 2835 ttagaaatgctccttgtgaaattcaaactt 2806
>dbj|AB008111.1| Arabidopsis thaliana Atrboh F mRNA, complete cds Length = 3080 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 72 ttagaaattctccttgtgaaactcaaactt 101 |||||||| |||||||||||| |||||||| Sbjct: 2849 ttagaaatgctccttgtgaaattcaaactt 2820
>ref|XM_955172.1| Neurospora crassa OR74A hypothetical protein (NCU07104.1) partial mRNA Length = 648 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 tctgccgacaactgccgcagc 144 ||||||||||||||||||||| Sbjct: 346 tctgccgacaactgccgcagc 366
>ref|XM_327389.1| Neurospora crassa OR74A hypothetical protein (NCU07104.1) partial mRNA Length = 648 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 tctgccgacaactgccgcagc 144 ||||||||||||||||||||| Sbjct: 346 tctgccgacaactgccgcagc 366
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 ctcggccacctcgttcatcac 422 ||||||||||||||||||||| Sbjct: 5429591 ctcggccacctcgttcatcac 5429611
>gb|AF055354.1|AF055354 Arabidopsis thaliana respiratory burst oxidase protein B (RbohB) gene, complete cds Length = 3917 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 73 tagaaattctccttgtgaaactcaaactt 101 |||||||| |||||||| ||||||||||| Sbjct: 3812 tagaaattttccttgtggaactcaaactt 3784
>gb|AC000106.1|F7G19 Sequence of BAC F7G19 from Arabidopsis thaliana chromosome 1, complete sequence Length = 110514 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 73 tagaaattctccttgtgaaactcaaactt 101 |||||||| |||||||| ||||||||||| Sbjct: 6694 tagaaattttccttgtggaactcaaactt 6722
>emb|AL732425.7| Mouse DNA sequence from clone RP23-364L1 on chromosome X, complete sequence Length = 145042 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 118 gtgaagtctgccgacaactgccgcagctg 146 ||||||||||||||||||| |||||||| Sbjct: 74406 gtgaagtctgccgacaactagcgcagctg 74378
>gb|AC133907.9| Mus musculus chromosome 1, clone RP24-239K20, complete sequence Length = 150662 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 55 tacatacatatgtgtaattagaaattct 82 ||||||||||||| ||||||| |||||| Sbjct: 101833 tacatacatatgtataattagtaattct 101806
>gb|AY362953.1| Haemophilus aphrophilus strain CCUG 3715 RpoB (rpoB) gene, partial cds Length = 520 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gttcctggagcatgacgatg 324 |||||||||||||||||||| Sbjct: 487 gttcctggagcatgacgatg 506
>gb|AY362931.1| Actinobacillus actinomycetemcomitans strain ATCC 29523 RpoB (rpoB) gene, partial cds Length = 520 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gttcctggagcatgacgatg 324 |||||||||||||||||||| Sbjct: 487 gttcctggagcatgacgatg 506
>gb|AY362930.1| Actinobacillus actinomycetemcomitans strain ATCC 43718 RpoB (rpoB) gene, partial cds Length = 520 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gttcctggagcatgacgatg 324 |||||||||||||||||||| Sbjct: 487 gttcctggagcatgacgatg 506
>emb|AL356102.13| Human DNA sequence from clone RP11-490P13 on chromosome 13, complete sequence Length = 139035 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 atatgtgtaattagaaattc 81 |||||||||||||||||||| Sbjct: 123831 atatgtgtaattagaaattc 123850
>emb|CR407599.9| Zebrafish DNA sequence from clone CH211-273O22 in linkage group 13, complete sequence Length = 32537 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 aactttgtgttggtattgtg 116 |||||||||||||||||||| Sbjct: 11819 aactttgtgttggtattgtg 11800
>gb|AC140778.15| Mus musculus chromosome 1, clone RP24-446J17, complete sequence Length = 160859 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 55 tacatacatatgtgtaattagaaattct 82 ||||||||||||| ||||||| |||||| Sbjct: 148059 tacatacatatgtataattagtaattct 148086
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 cttgacgctggtcccggacagaat 278 |||||||||||| ||||||||||| Sbjct: 245878 cttgacgctggtaccggacagaat 245901
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 409 acctcgttcatcacccctctgaaccactcaaa 440 ||||| |||||||| ||| ||||||||||||| Sbjct: 16141494 acctcattcatcactcctttgaaccactcaaa 16141463
>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556H01 Length = 149800 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 409 acctcgttcatcacccctctgaaccactcaaa 440 ||||| |||||||| ||| ||||||||||||| Sbjct: 46095 acctcattcatcactcctttgaaccactcaaa 46064
>dbj|AP005833.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1328_D07 Length = 155007 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 409 acctcgttcatcacccctctgaaccactcaaa 440 ||||| |||||||| ||| ||||||||||||| Sbjct: 141707 acctcattcatcactcctttgaaccactcaaa 141676
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 gaatatcgacccccttcttg 294 |||||||||||||||||||| Sbjct: 3414643 gaatatcgacccccttcttg 3414662
>emb|BX324191.9| Mouse DNA sequence from clone RP23-457L22 on chromosome X, complete sequence Length = 68456 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 tatagctacatacatatgtgtaat 72 ||||||| |||||||||||||||| Sbjct: 17218 tatagctgcatacatatgtgtaat 17195
>gb|AC119259.15| Mus musculus chromosome 18, clone RP24-285N19, complete sequence Length = 169310 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 aaaggcaggttcttacattatagc 54 ||||||||||||||||| |||||| Sbjct: 114769 aaaggcaggttcttacaatatagc 114746
>dbj|AP004933.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT10J03, TM0094b, complete sequence Length = 65726 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 409 acctcgttcatcacccctctgaaccactcaaaggagcctt 448 ||||| |||||||||||| | ||||| |||||||| |||| Sbjct: 37986 acctcattcatcacccctttaaaccagtcaaaggaacctt 38025
>emb|AL808116.6| Mouse DNA sequence from clone RP23-97H1 on chromosome X, complete sequence Length = 200519 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 acatacatatgtgtaattagaaat 79 |||||||| ||||||||||||||| Sbjct: 114246 acatacatctgtgtaattagaaat 114269 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,256,984 Number of Sequences: 3902068 Number of extensions: 3256984 Number of successful extensions: 60967 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 60637 Number of HSP's gapped (non-prelim): 318 length of query: 461 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 439 effective length of database: 17,147,199,772 effective search space: 7527620699908 effective search space used: 7527620699908 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)