ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags27l12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550368.1| Oryza sativa (japonica cultivar-group), mRNA 186 6e-44
2dbj|AK099356.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 6e-44
3dbj|AK059250.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 6e-44
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 92 3e-15
5dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic D... 92 3e-15
6dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic D... 92 3e-15
7gb|DQ429943.1| Sorghum propinquum locus pSB1475 genomic sequence 84 7e-13
8gb|DQ429942.1| Sorghum bicolor voucher PI585454 locus pSB1475 ge... 84 7e-13
9gb|DQ429941.1| Sorghum bicolor voucher PI267539 locus pSB1475 ge... 84 7e-13
10gb|DQ429940.1| Sorghum bicolor voucher PI267408 locus pSB1475 ge... 84 7e-13
11gb|DQ429939.1| Sorghum bicolor voucher PI221607 locus pSB1475 ge... 84 7e-13
12gb|DQ429938.1| Sorghum bicolor voucher PI152702 locus pSB1475 ge... 84 7e-13
13gb|DQ429937.1| Sorghum bicolor voucher NSL92371 locus pSB1475 ge... 84 7e-13
14gb|DQ429936.1| Sorghum bicolor voucher NSL87902b locus pSB1475 g... 84 7e-13
15gb|DQ429935.1| Sorghum bicolor voucher NSL87902a locus pSB1475 g... 84 7e-13
16gb|DQ429934.1| Sorghum bicolor voucher NSL87666b locus pSB1475 g... 84 7e-13
17gb|DQ429933.1| Sorghum bicolor voucher NSL87666a locus pSB1475 g... 84 7e-13
18gb|DQ429932.1| Sorghum bicolor voucher NSL77217 locus pSB1475 ge... 84 7e-13
19gb|DQ429931.1| Sorghum bicolor voucher NSL56174 locus pSB1475 ge... 84 7e-13
20gb|DQ429930.1| Sorghum bicolor voucher NSL55243 locus pSB1475 ge... 84 7e-13
21gb|DQ429929.1| Sorghum bicolor voucher NSL51365 locus pSB1475 ge... 84 7e-13
22gb|DQ429928.1| Sorghum bicolor voucher NSL51030 locus pSB1475 ge... 84 7e-13
23gb|DQ429927.1| Sorghum bicolor voucher NSL50875 locus pSB1475 ge... 84 7e-13
24gb|DQ429926.1| Sorghum bicolor voucher BTx623 locus pSB1475 geno... 84 7e-13
25gb|AY109862.1| Zea mays CL29373_-2 mRNA sequence 68 4e-08
26gb|AC124962.19| Medicago truncatula clone mth2-24d19, complete s... 44 0.60
27gb|AC123975.16| Medicago truncatula clone mth2-12m13, complete s... 44 0.60
28emb|AL138691.15| Human DNA sequence from clone RP11-310D8 on chr... 44 0.60
29emb|AL772302.20| Mouse DNA sequence from clone RP23-450F9 on chr... 44 0.60
30ref|XM_550549.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.4
31emb|AL139277.7| Human DNA sequence from clone RP11-465E19 on chr... 42 2.4
32gb|AC097067.3| Homo sapiens BAC clone RP11-558N14 from 4, comple... 42 2.4
33gb|AC096730.3| Homo sapiens BAC clone RP11-66A14 from 4, complet... 42 2.4
34dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
35dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
36gb|AC153801.1| Mus musculus 10 NOVECTOR RP24-255E19 (Roswell Par... 40 9.3
37gb|AC114537.6| Mus musculus chromosome 15, clone RP23-51A16, com... 40 9.3
38gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.3
39gb|AC084800.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 9.3
40gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 9.3
41gb|AC182674.2| Populus trichocarpa clone Pop1-27N13, complete se... 40 9.3
42emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 9.3
43gb|AC118006.9| Mus musculus chromosome 14, clone RP23-344J14, co... 40 9.3
44gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 9.3
45emb|CR848038.1| Chlamydophila abortus strain S26/3, complete genome 40 9.3
46gb|CP000088.1| Thermobifida fusca YX, complete genome 40 9.3
47gb|AC163742.4| Mus musculus BAC clone RP23-383K19 from chromosom... 40 9.3
48emb|AL662892.11| Mouse DNA sequence from clone RP23-408L15 on ch... 40 9.3
49emb|CR857580.1| Pongo pygmaeus mRNA; cDNA DKFZp469E1816 (from cl... 40 9.3
50gb|AC161377.6| Mus musculus BAC clone RP23-224D3 from chromosome... 40 9.3
51gb|AC160984.3| Mus musculus BAC clone RP23-260C12 from chromosom... 40 9.3
52gb|AC003075.2| Homo sapiens PAC clone RP4-658N5 from 7p21, compl... 40 9.3
53dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete g... 40 9.3
54gb|AC148340.3| Medicago truncatula chromosome 2 BAC clone mth2-2... 40 9.3
55gb|AC159203.2| Mus musculus BAC clone RP23-239O13 from chromosom... 40 9.3
56gb|AC154208.2| Mus musculus BAC clone RP24-377L12 from chromosom... 40 9.3
57gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 40 9.3
58dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
59gb|AC171739.3| Cavia porcellus clone CH234-497P15, complete sequ... 40 9.3
60gb|AC153655.4| Mus musculus BAC clone RP23-451K20 from chromosom... 40 9.3
61dbj|BS000061.1| Pan troglodytes chromosome 22 clone:PTB-027C13, ... 40 9.3
62dbj|BS000060.1| Pan troglodytes chromosome 22 clone:RP43-086L15,... 40 9.3
63gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 40 9.3
64gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.3
65emb|AL935152.9| Mouse DNA sequence from clone RP24-387M5 on chro... 40 9.3
66gb|AC140425.3| Mus musculus BAC clone RP24-97E12 from 1, complet... 40 9.3
67emb|AL627307.18| Mouse DNA sequence from clone RP23-258J11 on ch... 40 9.3 
>ref|XM_550368.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1149

 Score =  186 bits (94), Expect = 6e-44
 Identities = 315/389 (80%), Gaps = 6/389 (1%)
 Strand = Plus / Minus

                                                                        
Query: 297  tcatcgtctagctcggaactatcgaccccacccatgatggacaggaagacgagaaccgag 356
            |||||||||||||| || |||||| | ||||||||||  || ||||| |  |||||||  
Sbjct: 1124 tcatcgtctagctctgagctatcggctccacccatgagcgataggaatagaagaaccgca 1065

                                                                        
Query: 357  atgagttgggccgcaaggaagtactttgttcttcgccggaatttcttctcctcctctgtc 416
            | ||| || | ||||||||| ||||||| | |||||| ||| ||||| ||||||||||| 
Sbjct: 1064 acgagctgtgtcgcaaggaaatactttgcttttcgcctgaacttcttttcctcctctgtt 1005

                                                                        
Query: 417  cgctccttcttagctttgggtttcggcttgtaactttgtccagaagatgctgttttcctg 476
            || |||||||||||| ||||||| ||||| |||||  | |||||||| ||| ||||||||
Sbjct: 1004 cgttccttcttagctctgggttttggcttataactccgaccagaagacgctcttttcctg 945

                                                                        
Query: 477  ggcgtggatgaggatggcggatcagatgatgctgatcctgctgctgatgagtcaa----- 531
            || || || || ||||  ||||||| |||| |  |||||| ||||||||| |||      
Sbjct: 944  ggtgtagaggatgatgatggatcagttgatcccaatcctgttgctgatgaatcagaatca 885

                                                                        
Query: 532  -ctcccaccaattggaccttgatatcctcggcaagctttaccaagttgtcatagttctgc 590
             || |||  |||||||||||||  | || || ||  ||||||||||||||||| ||||||
Sbjct: 884  gcttccagtaattggaccttgaggtgcttggtaaagtttaccaagttgtcatacttctgc 825

                                                                        
Query: 591  aaatagcttcgcagcatagatgtagcaggtaatgcattaaggacaaaaagaacatgtcca 650
            | | |||||||||||| ||| ||| | |||||| ||||||| ||||||||  ||||||||
Sbjct: 824  agacagcttcgcagcacagacgtatccggtaatacattaagaacaaaaagcgcatgtcca 765

                                         
Query: 651  agcaaaagagcatcaacatctgtagggct 679
            || |||||||||||||| |||||||||||
Sbjct: 764  agaaaaagagcatcaacgtctgtagggct 736
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>dbj|AK099356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040E19, full
            insert sequence
          Length = 1309

 Score =  186 bits (94), Expect = 6e-44
 Identities = 315/389 (80%), Gaps = 6/389 (1%)
 Strand = Plus / Minus

                                                                        
Query: 297  tcatcgtctagctcggaactatcgaccccacccatgatggacaggaagacgagaaccgag 356
            |||||||||||||| || |||||| | ||||||||||  || ||||| |  |||||||  
Sbjct: 1000 tcatcgtctagctctgagctatcggctccacccatgagcgataggaatagaagaaccgca 941

                                                                        
Query: 357  atgagttgggccgcaaggaagtactttgttcttcgccggaatttcttctcctcctctgtc 416
            | ||| || | ||||||||| ||||||| | |||||| ||| ||||| ||||||||||| 
Sbjct: 940  acgagctgtgtcgcaaggaaatactttgcttttcgcctgaacttcttttcctcctctgtt 881

                                                                        
Query: 417  cgctccttcttagctttgggtttcggcttgtaactttgtccagaagatgctgttttcctg 476
            || |||||||||||| ||||||| ||||| |||||  | |||||||| ||| ||||||||
Sbjct: 880  cgttccttcttagctctgggttttggcttataactccgaccagaagacgctcttttcctg 821

                                                                        
Query: 477  ggcgtggatgaggatggcggatcagatgatgctgatcctgctgctgatgagtcaa----- 531
            || || || || ||||  ||||||| |||| |  |||||| ||||||||| |||      
Sbjct: 820  ggtgtagaggatgatgatggatcagttgatcccaatcctgttgctgatgaatcagaatca 761

                                                                        
Query: 532  -ctcccaccaattggaccttgatatcctcggcaagctttaccaagttgtcatagttctgc 590
             || |||  |||||||||||||  | || || ||  ||||||||||||||||| ||||||
Sbjct: 760  gcttccagtaattggaccttgaggtgcttggtaaagtttaccaagttgtcatacttctgc 701

                                                                        
Query: 591  aaatagcttcgcagcatagatgtagcaggtaatgcattaaggacaaaaagaacatgtcca 650
            | | |||||||||||| ||| ||| | |||||| ||||||| ||||||||  ||||||||
Sbjct: 700  agacagcttcgcagcacagacgtatccggtaatacattaagaacaaaaagcgcatgtcca 641

                                         
Query: 651  agcaaaagagcatcaacatctgtagggct 679
            || |||||||||||||| |||||||||||
Sbjct: 640  agaaaaagagcatcaacgtctgtagggct 612
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>dbj|AK059250.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G12, full
            insert sequence
          Length = 1226

 Score =  186 bits (94), Expect = 6e-44
 Identities = 315/389 (80%), Gaps = 6/389 (1%)
 Strand = Plus / Minus

                                                                        
Query: 297  tcatcgtctagctcggaactatcgaccccacccatgatggacaggaagacgagaaccgag 356
            |||||||||||||| || |||||| | ||||||||||  || ||||| |  |||||||  
Sbjct: 1016 tcatcgtctagctctgagctatcggctccacccatgagcgataggaatagaagaaccgca 957

                                                                        
Query: 357  atgagttgggccgcaaggaagtactttgttcttcgccggaatttcttctcctcctctgtc 416
            | ||| || | ||||||||| ||||||| | |||||| ||| ||||| ||||||||||| 
Sbjct: 956  acgagctgtgtcgcaaggaaatactttgcttttcgcctgaacttcttttcctcctctgtt 897

                                                                        
Query: 417  cgctccttcttagctttgggtttcggcttgtaactttgtccagaagatgctgttttcctg 476
            || |||||||||||| ||||||| ||||| |||||  | |||||||| ||| ||||||||
Sbjct: 896  cgttccttcttagctctgggttttggcttataactccgaccagaagacgctcttttcctg 837

                                                                        
Query: 477  ggcgtggatgaggatggcggatcagatgatgctgatcctgctgctgatgagtcaa----- 531
            || || || || ||||  ||||||| |||| |  |||||| ||||||||| |||      
Sbjct: 836  ggtgtagaggatgatgatggatcagttgatcccaatcctgttgctgatgaatcagaatca 777

                                                                        
Query: 532  -ctcccaccaattggaccttgatatcctcggcaagctttaccaagttgtcatagttctgc 590
             || |||  |||||||||||||  | || || ||  ||||||||||||||||| ||||||
Sbjct: 776  gcttccagtaattggaccttgaggtgcttggtaaagtttaccaagttgtcatacttctgc 717

                                                                        
Query: 591  aaatagcttcgcagcatagatgtagcaggtaatgcattaaggacaaaaagaacatgtcca 650
            | | |||||||||||| ||| ||| | |||||| ||||||| ||||||||  ||||||||
Sbjct: 716  agacagcttcgcagcacagacgtatccggtaatacattaagaacaaaaagcgcatgtcca 657

                                         
Query: 651  agcaaaagagcatcaacatctgtagggct 679
            || |||||||||||||| |||||||||||
Sbjct: 656  agaaaaagagcatcaacgtctgtagggct 628
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 127/154 (82%)
 Strand = Plus / Minus

                                                                           
Query: 297     tcatcgtctagctcggaactatcgaccccacccatgatggacaggaagacgagaaccgag 356
               |||||||||||||| || |||||| | ||||||||||  || ||||| |  |||||||  
Sbjct: 3432160 tcatcgtctagctctgagctatcggctccacccatgagcgataggaatagaagaaccgca 3432101

                                                                           
Query: 357     atgagttgggccgcaaggaagtactttgttcttcgccggaatttcttctcctcctctgtc 416
               | ||| || | ||||||||| ||||||| | |||||| ||| ||||| ||||||||||| 
Sbjct: 3432100 acgagctgtgtcgcaaggaaatactttgcttttcgcctgaacttcttttcctcctctgtt 3432041

                                                 
Query: 417     cgctccttcttagctttgggtttcggcttgtaac 450
               || |||||||||||| ||||||| ||||| ||||
Sbjct: 3432040 cgttccttcttagctctgggttttggcttataac 3432007



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                           
Query: 618     ggtaatgcattaaggacaaaaagaacatgtccaagcaaaagagcatcaacatctgtaggg 677
               |||||| ||||||| ||||||||  |||||||||| |||||||||||||| |||||||||
Sbjct: 3429568 ggtaatacattaagaacaaaaagcgcatgtccaagaaaaagagcatcaacgtctgtaggg 3429509

                 
Query: 678     ct 679
               ||
Sbjct: 3429508 ct 3429507



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                       
Query: 567     tttaccaagttgtcatagttctgcaaatagcttcgcagca 606
               ||||||||||||||||| ||||||| | ||||||||||||
Sbjct: 3429901 tttaccaagttgtcatacttctgcagacagcttcgcagca 3429862



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 392     ccggaatttcttctcctcctc 412
               |||||||||||||||||||||
Sbjct: 1077995 ccggaatttcttctcctcctc 1078015
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>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0033B09
          Length = 143545

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 127/154 (82%)
 Strand = Plus / Minus

                                                                         
Query: 297   tcatcgtctagctcggaactatcgaccccacccatgatggacaggaagacgagaaccgag 356
             |||||||||||||| || |||||| | ||||||||||  || ||||| |  |||||||  
Sbjct: 48864 tcatcgtctagctctgagctatcggctccacccatgagcgataggaatagaagaaccgca 48805

                                                                         
Query: 357   atgagttgggccgcaaggaagtactttgttcttcgccggaatttcttctcctcctctgtc 416
             | ||| || | ||||||||| ||||||| | |||||| ||| ||||| ||||||||||| 
Sbjct: 48804 acgagctgtgtcgcaaggaaatactttgcttttcgcctgaacttcttttcctcctctgtt 48745

                                               
Query: 417   cgctccttcttagctttgggtttcggcttgtaac 450
             || |||||||||||| ||||||| ||||| ||||
Sbjct: 48744 cgttccttcttagctctgggttttggcttataac 48711



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                         
Query: 618   ggtaatgcattaaggacaaaaagaacatgtccaagcaaaagagcatcaacatctgtaggg 677
             |||||| ||||||| ||||||||  |||||||||| |||||||||||||| |||||||||
Sbjct: 46272 ggtaatacattaagaacaaaaagcgcatgtccaagaaaaagagcatcaacgtctgtaggg 46213

               
Query: 678   ct 679
             ||
Sbjct: 46212 ct 46211



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                     
Query: 567   tttaccaagttgtcatagttctgcaaatagcttcgcagca 606
             ||||||||||||||||| ||||||| | ||||||||||||
Sbjct: 46605 tttaccaagttgtcatacttctgcagacagcttcgcagca 46566
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>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone
              P0680A03
          Length = 156054

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 127/154 (82%)
 Strand = Plus / Minus

                                                                          
Query: 297    tcatcgtctagctcggaactatcgaccccacccatgatggacaggaagacgagaaccgag 356
              |||||||||||||| || |||||| | ||||||||||  || ||||| |  |||||||  
Sbjct: 123714 tcatcgtctagctctgagctatcggctccacccatgagcgataggaatagaagaaccgca 123655

                                                                          
Query: 357    atgagttgggccgcaaggaagtactttgttcttcgccggaatttcttctcctcctctgtc 416
              | ||| || | ||||||||| ||||||| | |||||| ||| ||||| ||||||||||| 
Sbjct: 123654 acgagctgtgtcgcaaggaaatactttgcttttcgcctgaacttcttttcctcctctgtt 123595

                                                
Query: 417    cgctccttcttagctttgggtttcggcttgtaac 450
              || |||||||||||| ||||||| ||||| ||||
Sbjct: 123594 cgttccttcttagctctgggttttggcttataac 123561



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                          
Query: 618    ggtaatgcattaaggacaaaaagaacatgtccaagcaaaagagcatcaacatctgtaggg 677
              |||||| ||||||| ||||||||  |||||||||| |||||||||||||| |||||||||
Sbjct: 121122 ggtaatacattaagaacaaaaagcgcatgtccaagaaaaagagcatcaacgtctgtaggg 121063

                
Query: 678    ct 679
              ||
Sbjct: 121062 ct 121061



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                      
Query: 567    tttaccaagttgtcatagttctgcaaatagcttcgcagca 606
              ||||||||||||||||| ||||||| | ||||||||||||
Sbjct: 121455 tttaccaagttgtcatacttctgcagacagcttcgcagca 121416
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>gb|DQ429943.1| Sorghum propinquum locus pSB1475 genomic sequence
          Length = 725

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 630 aggacaaaaagaacatgtccaagcaaaagagcatcaacatctgtagggct 679
           |||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 170 aggacaaaaagagcatgtccaaggaaaagagcatcaacatctgtagggct 121
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>gb|DQ429942.1| Sorghum bicolor voucher PI585454 locus pSB1475 genomic sequence
          Length = 722

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 630 aggacaaaaagaacatgtccaagcaaaagagcatcaacatctgtagggct 679
           |||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 167 aggacaaaaagagcatgtccaaggaaaagagcatcaacatctgtagggct 118
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>gb|DQ429941.1| Sorghum bicolor voucher PI267539 locus pSB1475 genomic sequence
          Length = 722

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 630 aggacaaaaagaacatgtccaagcaaaagagcatcaacatctgtagggct 679
           |||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 167 aggacaaaaagagcatgtccaaggaaaagagcatcaacatctgtagggct 118
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>gb|DQ429940.1| Sorghum bicolor voucher PI267408 locus pSB1475 genomic sequence
          Length = 722

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 630 aggacaaaaagaacatgtccaagcaaaagagcatcaacatctgtagggct 679
           |||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 167 aggacaaaaagagcatgtccaaggaaaagagcatcaacatctgtagggct 118
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>gb|DQ429939.1| Sorghum bicolor voucher PI221607 locus pSB1475 genomic sequence
          Length = 722

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 630 aggacaaaaagaacatgtccaagcaaaagagcatcaacatctgtagggct 679
           |||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 167 aggacaaaaagagcatgtccaaggaaaagagcatcaacatctgtagggct 118
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>gb|DQ429938.1| Sorghum bicolor voucher PI152702 locus pSB1475 genomic sequence
          Length = 722

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 630 aggacaaaaagaacatgtccaagcaaaagagcatcaacatctgtagggct 679
           |||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 167 aggacaaaaagagcatgtccaaggaaaagagcatcaacatctgtagggct 118
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>gb|DQ429937.1| Sorghum bicolor voucher NSL92371 locus pSB1475 genomic sequence
          Length = 722

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 630 aggacaaaaagaacatgtccaagcaaaagagcatcaacatctgtagggct 679
           |||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 167 aggacaaaaagagcatgtccaaggaaaagagcatcaacatctgtagggct 118
to top
>gb|DQ429936.1| Sorghum bicolor voucher NSL87902b locus pSB1475 genomic sequence
          Length = 722

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 630 aggacaaaaagaacatgtccaagcaaaagagcatcaacatctgtagggct 679
           |||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 167 aggacaaaaagagcatgtccaaggaaaagagcatcaacatctgtagggct 118
to top
>gb|DQ429935.1| Sorghum bicolor voucher NSL87902a locus pSB1475 genomic sequence
          Length = 722

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 630 aggacaaaaagaacatgtccaagcaaaagagcatcaacatctgtagggct 679
           |||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 167 aggacaaaaagagcatgtccaaggaaaagagcatcaacatctgtagggct 118
to top
>gb|DQ429934.1| Sorghum bicolor voucher NSL87666b locus pSB1475 genomic sequence
          Length = 722

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 630 aggacaaaaagaacatgtccaagcaaaagagcatcaacatctgtagggct 679
           |||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 167 aggacaaaaagagcatgtccaaggaaaagagcatcaacatctgtagggct 118
to top
>gb|DQ429933.1| Sorghum bicolor voucher NSL87666a locus pSB1475 genomic sequence
          Length = 722

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 630 aggacaaaaagaacatgtccaagcaaaagagcatcaacatctgtagggct 679
           |||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 167 aggacaaaaagagcatgtccaaggaaaagagcatcaacatctgtagggct 118
to top
>gb|DQ429932.1| Sorghum bicolor voucher NSL77217 locus pSB1475 genomic sequence
          Length = 716

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 630 aggacaaaaagaacatgtccaagcaaaagagcatcaacatctgtagggct 679
           |||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 167 aggacaaaaagagcatgtccaaggaaaagagcatcaacatctgtagggct 118
to top
>gb|DQ429931.1| Sorghum bicolor voucher NSL56174 locus pSB1475 genomic sequence
          Length = 722

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 630 aggacaaaaagaacatgtccaagcaaaagagcatcaacatctgtagggct 679
           |||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 167 aggacaaaaagagcatgtccaaggaaaagagcatcaacatctgtagggct 118
to top
>gb|DQ429930.1| Sorghum bicolor voucher NSL55243 locus pSB1475 genomic sequence
          Length = 716

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 630 aggacaaaaagaacatgtccaagcaaaagagcatcaacatctgtagggct 679
           |||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 167 aggacaaaaagagcatgtccaaggaaaagagcatcaacatctgtagggct 118
to top
>gb|DQ429929.1| Sorghum bicolor voucher NSL51365 locus pSB1475 genomic sequence
          Length = 716

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 630 aggacaaaaagaacatgtccaagcaaaagagcatcaacatctgtagggct 679
           |||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 167 aggacaaaaagagcatgtccaaggaaaagagcatcaacatctgtagggct 118
to top
>gb|DQ429928.1| Sorghum bicolor voucher NSL51030 locus pSB1475 genomic sequence
          Length = 722

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 630 aggacaaaaagaacatgtccaagcaaaagagcatcaacatctgtagggct 679
           |||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 167 aggacaaaaagagcatgtccaaggaaaagagcatcaacatctgtagggct 118
to top
>gb|DQ429927.1| Sorghum bicolor voucher NSL50875 locus pSB1475 genomic sequence
          Length = 722

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 630 aggacaaaaagaacatgtccaagcaaaagagcatcaacatctgtagggct 679
           |||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 167 aggacaaaaagagcatgtccaaggaaaagagcatcaacatctgtagggct 118
to top
>gb|DQ429926.1| Sorghum bicolor voucher BTx623 locus pSB1475 genomic sequence
          Length = 722

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                             
Query: 630 aggacaaaaagaacatgtccaagcaaaagagcatcaacatctgtagggct 679
           |||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 167 aggacaaaaagagcatgtccaaggaaaagagcatcaacatctgtagggct 118
to top
>gb|AY109862.1| Zea mays CL29373_-2 mRNA sequence
          Length = 688

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 643 catgtccaagcaaaagagcatcaacatctgtagggcta 680
           |||||||||| |||||||||||||||||||||||||||
Sbjct: 443 catgtccaaggaaaagagcatcaacatctgtagggcta 480



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 300 tcgtctagctcggaactatcgaccccacccat 331
           |||||||||||||||||||| |||||||||||
Sbjct: 97  tcgtctagctcggaactatcaaccccacccat 128
to top
>gb|AC124962.19| Medicago truncatula clone mth2-24d19, complete sequence
          Length = 126541

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 638   aagaacatgtccaagcaaaagagcatcaac 667
             |||||||| || ||||||||||||||||||
Sbjct: 94335 aagaacatctcaaagcaaaagagcatcaac 94306
to top
>gb|AC123975.16| Medicago truncatula clone mth2-12m13, complete sequence
          Length = 121884

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 638    aagaacatgtccaagcaaaagagcatcaac 667
              |||||||| || ||||||||||||||||||
Sbjct: 104410 aagaacatctcaaagcaaaagagcatcaac 104439
to top
>emb|AL138691.15| Human DNA sequence from clone RP11-310D8 on chromosome 13 Contains the
              SOX1 gene for SRY (sex determining region Y)-box 1 protein
              and 7 CpG islands, complete sequence
          Length = 147665

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 418    gctccttcttagctttgggttt 439
              ||||||||||||||||||||||
Sbjct: 105238 gctccttcttagctttgggttt 105259
to top
>emb|AL772302.20| Mouse DNA sequence from clone RP23-450F9 on chromosome 4, complete
              sequence
          Length = 202175

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 398    tttcttctcctcctctgtccgctccttctt 427
              |||||||||||||||| ||| |||||||||
Sbjct: 193724 tttcttctcctcctctttcccctccttctt 193695
to top
>ref|XM_550549.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 657

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 392 ccggaatttcttctcctcctc 412
           |||||||||||||||||||||
Sbjct: 60  ccggaatttcttctcctcctc 40
to top
>emb|AL139277.7| Human DNA sequence from clone RP11-465E19 on chromosome Xp11.1-11.23
             Contains the 3' end of the RRAGB for Ras-related GTP
             binding B, complete sequence
          Length = 158591

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 499   cagatgatgctgatcctgctg 519
             |||||||||||||||||||||
Sbjct: 23974 cagatgatgctgatcctgctg 23994
to top
>gb|AC097067.3| Homo sapiens BAC clone RP11-558N14 from 4, complete sequence
          Length = 136500

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 402   ttctcctcctctgtccgctccttct 426
             ||||||||||||||| |||||||||
Sbjct: 46943 ttctcctcctctgtctgctccttct 46967
to top
>gb|AC096730.3| Homo sapiens BAC clone RP11-66A14 from 4, complete sequence
          Length = 188921

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 229   gaattagaccttcaaaaagaa 249
             |||||||||||||||||||||
Sbjct: 94346 gaattagaccttcaaaaagaa 94366
to top
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0660D08
          Length = 146915

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 392   ccggaatttcttctcctcctc 412
             |||||||||||||||||||||
Sbjct: 54218 ccggaatttcttctcctcctc 54238
to top
>dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0062J13
          Length = 152837

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 392    ccggaatttcttctcctcctc 412
              |||||||||||||||||||||
Sbjct: 140868 ccggaatttcttctcctcctc 140888
to top
>gb|AC153801.1| Mus musculus 10 NOVECTOR RP24-255E19 (Roswell Park Cancer Institute
              (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 156755

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 398    tttcttctcctcctctgtcc 417
              ||||||||||||||||||||
Sbjct: 130147 tttcttctcctcctctgtcc 130128
to top
>gb|AC114537.6| Mus musculus chromosome 15, clone RP23-51A16, complete sequence
          Length = 189760

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 503    tgatgctgatcctgctgctg 522
              ||||||||||||||||||||
Sbjct: 143397 tgatgctgatcctgctgctg 143378
to top
>gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0042J05, complete sequence
          Length = 150295

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 502    atgatgctgatcctgctgct 521
              ||||||||||||||||||||
Sbjct: 103780 atgatgctgatcctgctgct 103761
to top
>gb|AC084800.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-13A15, complete
              sequence
          Length = 213181

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 286    ccaattcatagtcatcgtct 305
              ||||||||||||||||||||
Sbjct: 173817 ccaattcatagtcatcgtct 173798
to top
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 507     gctgatcctgctgctgatga 526
               ||||||||||||||||||||
Sbjct: 5990115 gctgatcctgctgctgatga 5990096
to top
>gb|AC182674.2| Populus trichocarpa clone Pop1-27N13, complete sequence
          Length = 118702

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   tagcaaagggaacaagctcc 201
             ||||||||||||||||||||
Sbjct: 12818 tagcaaagggaacaagctcc 12799
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 471    ttcctgggcgtggatgagga 490
              ||||||||||||||||||||
Sbjct: 786657 ttcctgggcgtggatgagga 786638
to top
>gb|AC118006.9| Mus musculus chromosome 14, clone RP23-344J14, complete sequence
          Length = 232234

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 449    actttgtccagaagatgctgtttt 472
              |||||||||| |||||||||||||
Sbjct: 145087 actttgtccacaagatgctgtttt 145110
to top
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 643     catgtccaagcaaaagagca 662
               ||||||||||||||||||||
Sbjct: 3680279 catgtccaagcaaaagagca 3680260
to top
>emb|CR848038.1| Chlamydophila abortus strain S26/3, complete genome
          Length = 1144377

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 622    atgcattaaggacaaaaaga 641
              ||||||||||||||||||||
Sbjct: 973405 atgcattaaggacaaaaaga 973424
to top
>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 506     tgctgatcctgctgctgatg 525
               ||||||||||||||||||||
Sbjct: 2954209 tgctgatcctgctgctgatg 2954190
to top
>gb|AC163742.4| Mus musculus BAC clone RP23-383K19 from chromosome 14, complete
            sequence
          Length = 199109

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 575  gttgtcatagttctgcaaat 594
            ||||||||||||||||||||
Sbjct: 5063 gttgtcatagttctgcaaat 5044
to top
>emb|AL662892.11| Mouse DNA sequence from clone RP23-408L15 on chromosome 11 Contains
             part of a novel gene, a novel gene, a SMT3 (supressor of
             mif two, 3) homolog 1 (S. cerevisiae) (Smt3h1) pseudogene
             and a ribosomal protein S12 (Rps12) pseudogene, complete
             sequence
          Length = 106145

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 453   tgtccagaagatgctgtttt 472
             ||||||||||||||||||||
Sbjct: 20132 tgtccagaagatgctgtttt 20151
to top
>emb|CR857580.1| Pongo pygmaeus mRNA; cDNA DKFZp469E1816 (from clone DKFZp469E1816)
          Length = 4164

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 400 tcttctcctcctctgtccgc 419
           ||||||||||||||||||||
Sbjct: 596 tcttctcctcctctgtccgc 577
to top
>gb|AC161377.6| Mus musculus BAC clone RP23-224D3 from chromosome 16, complete sequence
          Length = 201384

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 453    tgtccagaagatgctgttttcctg 476
              ||||||||| ||||||||||||||
Sbjct: 198267 tgtccagaaaatgctgttttcctg 198290
to top
>gb|AC160984.3| Mus musculus BAC clone RP23-260C12 from chromosome 14, complete
             sequence
          Length = 206110

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 575   gttgtcatagttctgcaaat 594
             ||||||||||||||||||||
Sbjct: 84342 gttgtcatagttctgcaaat 84361
to top
>gb|AC003075.2| Homo sapiens PAC clone RP4-658N5 from 7p21, complete sequence
          Length = 123336

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 500   agatgatgctgatcctgctg 519
             ||||||||||||||||||||
Sbjct: 79889 agatgatgctgatcctgctg 79908
to top
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome
          Length = 144170

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 339    aggaagacgagaaccgagat 358
              ||||||||||||||||||||
Sbjct: 126419 aggaagacgagaaccgagat 126438
to top
>gb|AC148340.3| Medicago truncatula chromosome 2 BAC clone mth2-22d10, complete
             sequence
          Length = 105618

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    tttccatgaagccatacaaa 76
             ||||||||||||||||||||
Sbjct: 17505 tttccatgaagccatacaaa 17524
to top
>gb|AC159203.2| Mus musculus BAC clone RP23-239O13 from chromosome 13, complete
             sequence
          Length = 181617

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 453   tgtccagaagatgctgtttt 472
             ||||||||||||||||||||
Sbjct: 25680 tgtccagaagatgctgtttt 25661
to top
>gb|AC154208.2| Mus musculus BAC clone RP24-377L12 from chromosome 16, complete sequence
          Length = 178006

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 453    tgtccagaagatgctgttttcctg 476
              ||||||||| ||||||||||||||
Sbjct: 149496 tgtccagaaaatgctgttttcctg 149473
to top
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 236     accttcaaaaagaatcttcc 255
               ||||||||||||||||||||
Sbjct: 4001583 accttcaaaaagaatcttcc 4001602
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 502      atgatgctgatcctgctgct 521
                ||||||||||||||||||||
Sbjct: 23087777 atgatgctgatcctgctgct 23087758
to top
>gb|AC171739.3| Cavia porcellus clone CH234-497P15, complete sequence
          Length = 158596

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 397  atttcttctcctcctctgtc 416
            ||||||||||||||||||||
Sbjct: 8164 atttcttctcctcctctgtc 8183
to top
>gb|AC153655.4| Mus musculus BAC clone RP23-451K20 from chromosome 1, complete sequence
          Length = 167208

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 453    tgtccagaagatgctgtttt 472
              ||||||||||||||||||||
Sbjct: 128599 tgtccagaagatgctgtttt 128618
to top
>dbj|BS000061.1| Pan troglodytes chromosome 22 clone:PTB-027C13, map 22, complete
            sequences
          Length = 164304

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 398  tttcttctcctcctctgtcc 417
            ||||||||||||||||||||
Sbjct: 6320 tttcttctcctcctctgtcc 6339
to top
>dbj|BS000060.1| Pan troglodytes chromosome 22 clone:RP43-086L15, map 22, complete
              sequences
          Length = 159919

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 398    tttcttctcctcctctgtcc 417
              ||||||||||||||||||||
Sbjct: 146545 tttcttctcctcctctgtcc 146564
to top
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 236     accttcaaaaagaatcttcc 255
               ||||||||||||||||||||
Sbjct: 3942021 accttcaaaaagaatcttcc 3942040
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 502      atgatgctgatcctgctgct 521
                ||||||||||||||||||||
Sbjct: 23397687 atgatgctgatcctgctgct 23397668
to top
>emb|AL935152.9| Mouse DNA sequence from clone RP24-387M5 on chromosome 2, complete
             sequence
          Length = 98020

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 574   agttgtcatagttctgcaaa 593
             ||||||||||||||||||||
Sbjct: 41393 agttgtcatagttctgcaaa 41412
to top
>gb|AC140425.3| Mus musculus BAC clone RP24-97E12 from 1, complete sequence
          Length = 187415

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 453   tgtccagaagatgctgtttt 472
             ||||||||||||||||||||
Sbjct: 50709 tgtccagaagatgctgtttt 50728
to top
>emb|AL627307.18| Mouse DNA sequence from clone RP23-258J11 on chromosome 4, complete
             sequence
          Length = 108542

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 453   tgtccagaagatgctgtttt 472
             ||||||||||||||||||||
Sbjct: 38385 tgtccagaagatgctgtttt 38366


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,829,979
Number of Sequences: 3902068
Number of extensions: 5829979
Number of successful extensions: 121758
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121375
Number of HSP's gapped (non-prelim): 377
length of query: 680
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 657
effective length of database: 17,143,297,704
effective search space: 11263146591528
effective search space used: 11263146591528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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