>NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-)|
           (Fragments)
          Length = 368

 Score =  236 bits (603), Expect = 2e-62
 Identities = 110/111 (99%), Positives = 110/111 (99%)
 Frame = -1

Query: 535 NYERTCPLYQSQCVNADKTHYSGTMNGTXFVVAGGGGSHLSSYTTAIPKWSIFRDHDYGF 356
           NYERTCPLYQSQCVNADKTHYSGTMNGT FVVAGGGGSHLSSYTTAIPKWSIFRDHDYGF
Sbjct: 258 NYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHDYGF 317

Query: 355 TKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS 203
           TKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS
Sbjct: 318 TKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS 368

>PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6-optimum acid|
           phosphatase) (APase6)
          Length = 614

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
 Frame = -1

Query: 532 YERTCPLYQSQCVNA-----DKTHYSGTMNGTXFVVAGGGG-----SHLSSYTTAIPKWS 383
           YER  PL  +  ++      + T+Y+        ++ G  G     S  S         +
Sbjct: 503 YERLYPLGANGTIDTAAIVNNNTYYAHNGKSITHIINGMAGNIESHSEFSDGEGLTNITA 562

Query: 382 IFRDHDYGFTKLTAFNHSSLLFEYMKSSDGKVYDSFTI 269
           +     YGF+KLT FN ++L +E ++  DG V DS T+
Sbjct: 563 LLDKVHYGFSKLTIFNETALKWELIRGDDGTVGDSLTL 600

>RP1_MOUSE (P56716) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein|
            homolog)
          Length = 2095

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 2/133 (1%)
 Frame = -1

Query: 532  YERTCPLYQ--SQCVNADKTHYSGTMNGTXFVVAGGGGSHLSSYTTAIPKWSIFRDHDYG 359
            + ++ PL Q  S  VN ++  + G    T      G     +   T    WS   + + G
Sbjct: 914  HRKSGPLCQNRSDVVNYNRNGFLGNNLHTTSSKGNGFLMESNKSKTKNDNWSGNTNQETG 973

Query: 358  FTKLTAFNHSSLLFEYMKSSDGKVYDSFTIHRDYRDVLSCVHDSCFPTTLAS*LISSGRH 179
             + +   N   L   + +S +G +YDS+         L  +HD+C  +       S+  H
Sbjct: 974  KSLVAKDNGEELNKHHCESQNGSLYDSY---------LVSLHDNCTLSQTTINEPSTKSH 1024

Query: 178  VNVMEGHPSNKIV 140
            +++ +  P  K+V
Sbjct: 1025 LSIEKSRPEVKLV 1037

>XRCC2_HUMAN (O43543) DNA-repair protein XRCC2 (X-ray repair cross-complementing|
           protein 2)
          Length = 280

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
 Frame = +1

Query: 64  THLLHDLFTSTYKLCS*P---ILLLNTCPQFYWMD 159
           THLL  L++     CS P   +L+L++   FYW+D
Sbjct: 124 THLLLTLYSLESMFCSHPSLCLLILDSLSAFYWID 158

>DSCAM_HUMAN (O60469) Down syndrome cell adhesion molecule precursor (CHD2)|
          Length = 2012

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 352 KLTAFNHSSLLFEYMKSSDGKVYDSF 275
           ++T  NH +L+ ++M  SDG  Y  F
Sbjct: 361 RITGINHENLIMDHMVKSDGGAYQCF 386


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,243,514
Number of Sequences: 219361
Number of extensions: 1165174
Number of successful extensions: 2743
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2738
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4142954952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)