| Clone Name | rbags27k02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X82148.1|TAVDAC3 T.aestivum VDAC3 mRNA for voltage dependent anion channel Length = 1208 Score = 710 bits (358), Expect = 0.0 Identities = 481/518 (92%), Gaps = 5/518 (0%) Strand = Plus / Minus Query: 27 cattttacaagattcacaatagatcttaatnnccagaaattattgacaggcgctgctcat 86 ||||| |||||||||||||||| ||||||| ||||||||||||| ||||||||| | || Sbjct: 1141 catttgacaagattcacaataggtcttaatcaccagaaattattggcaggcgctgatgat 1082 Query: 87 caaatcaaaacaatgagctcgtcaaggntaacatttgcctaggaaacagattatgtggac 146 |||||||||| || ||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 1081 caaatcaaaataacgaggaggtcaaggctaacatttgcctaggaaacagattatgtggac 1022 Query: 147 aaaggaggaattcaagatcaaaatgaatgcaccaagagatggcctggggccatgttattc 206 ||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||| Sbjct: 1021 aaaggaggaattcaagatcaaaatgaaagcacgaagagatgacctggggccatgttattc 962 Query: 207 caatccagcagaactg--tttttctttccaaaacat-tggtcccagccatgcatctcaag 263 |||||||||||||||| ||| ||| |||||||| ||||||||| ||||||||||| Sbjct: 961 caatccagcagaactgaaccttttttttcaaaacatagggtcccagctgtgcatctcaag 902 Query: 264 gctttagcaccaatgacaaaccaacttttgtgctcttctcaattgccttggtgtcaacct 323 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 gctttagcaccaatgacagaccaacttttgtgctcttctcaattgccttggtgtcaacct 842 Query: 324 cgccggagatggtgacgagtgactttggtcgccattcatgctggacaagggcactggcca 383 ||||||||||||| ||||||||||| | ||||||||||||||||||||||||||| |||| Sbjct: 841 cgccggagatggtaacgagtgacttggctcgccattcatgctggacaagggcactagcca 782 Query: 384 tgccataattgttgaagcgtgccttcacactggtgtgcgggtccaatgagtgctgcgatc 443 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 781 tgccatagttgttgaagcgtgccttcacactggtgtgcgggtccaatgagtgctgtgatc 722 Query: 444 caaatatcaatgtgctctcgttccttgggaagttgtgggacagctctgctccaacagcag 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 721 caaatatcaatgtgctctcgttccttgggaagttgtgggacagctctgctccaacagcgg 662 Query: 504 tgcttgaa-tgtgactttactaagtggtagtaagacgc 540 |||| ||| ||| ||||||||||||||||||||||||| Sbjct: 661 tgctagaagtgt-actttactaagtggtagtaagacgc 625
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 240 bits (121), Expect = 4e-60 Identities = 238/277 (85%) Strand = Plus / Plus Query: 258 ctcaaggctttagcaccaatgacaaaccaacttttgtgctcttctcaattgccttggtgt 317 ||||| |||| |||||||| ||||| |||||||| ||||||||||||||||||||||||| Sbjct: 22904655 ctcaatgcttgagcaccaaggacaagccaactttcgtgctcttctcaattgccttggtgt 22904714 Query: 318 caacctcgccggagatggtgacgagtgactttggtcgccattcatgctggacaagggcac 377 ||||||| || |||||||||| || || || || ||||||||||||||||| || || | Sbjct: 22904715 caacctcaccagagatggtgattagcgatttgggacgccattcatgctggacgagcgcgc 22904774 Query: 378 tggccatgccataattgttgaagcgtgccttcacactggtgtgcgggtccaatgagtgct 437 ||||||||||||| ||||||||||| |||||||| | ||||| |||||||||||||||| Sbjct: 22904775 tggccatgccatagttgttgaagcgagccttcactgtcgtgtgagggtccaatgagtgct 22904834 Query: 438 gcgatccaaatatcaatgtgctctcgttccttgggaagttgtgggacagctctgctccaa 497 | || ||||| |||| ||||||||| ||||||| |||| ||||||||||||| ||||| | Sbjct: 22904835 gggacccaaagatcagtgtgctctcattccttgagaagctgtgggacagctcagctccta 22904894 Query: 498 cagcagtgcttgaatgtgactttactaagtggtagta 534 | |||||| | ||||| |||||| | ||||||||| Sbjct: 22904895 cggcagtgttcgaatggtgctttaccaggtggtagta 22904931 Score = 40.1 bits (20), Expect = 7.3 Identities = 83/104 (79%) Strand = Plus / Plus Query: 308 gccttggtgtcaacctcgccggagatggtgacgagtgactttggtcgccattcatgctgg 367 ||||||||||| |||||| |||||| || | || ||||| |||| ||| || |||||| Sbjct: 29763787 gccttggtgtcgacctcggcggagagcgttaagaaagacttgggtctccactcgtgctgg 29763846 Query: 368 acaagggcactggccatgccataattgttgaagcgtgccttcac 411 | ||||| ||| ||||||| | |||||| |||| |||||||| Sbjct: 29763847 atgagggcgctgaccatgccgtggttgttgtagcgcgccttcac 29763890
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 240 bits (121), Expect = 4e-60 Identities = 238/277 (85%) Strand = Plus / Plus Query: 258 ctcaaggctttagcaccaatgacaaaccaacttttgtgctcttctcaattgccttggtgt 317 ||||| |||| |||||||| ||||| |||||||| ||||||||||||||||||||||||| Sbjct: 108212 ctcaatgcttgagcaccaaggacaagccaactttcgtgctcttctcaattgccttggtgt 108271 Query: 318 caacctcgccggagatggtgacgagtgactttggtcgccattcatgctggacaagggcac 377 ||||||| || |||||||||| || || || || ||||||||||||||||| || || | Sbjct: 108272 caacctcaccagagatggtgattagcgatttgggacgccattcatgctggacgagcgcgc 108331 Query: 378 tggccatgccataattgttgaagcgtgccttcacactggtgtgcgggtccaatgagtgct 437 ||||||||||||| ||||||||||| |||||||| | ||||| |||||||||||||||| Sbjct: 108332 tggccatgccatagttgttgaagcgagccttcactgtcgtgtgagggtccaatgagtgct 108391 Query: 438 gcgatccaaatatcaatgtgctctcgttccttgggaagttgtgggacagctctgctccaa 497 | || ||||| |||| ||||||||| ||||||| |||| ||||||||||||| ||||| | Sbjct: 108392 gggacccaaagatcagtgtgctctcattccttgagaagctgtgggacagctcagctccta 108451 Query: 498 cagcagtgcttgaatgtgactttactaagtggtagta 534 | |||||| | ||||| |||||| | ||||||||| Sbjct: 108452 cggcagtgttcgaatggtgctttaccaggtggtagta 108488
>emb|AJ251563.1|OSA251563 Oryza sativa mRNA for voltage-dependent anion channel (VDAC3 gene) Length = 1148 Score = 240 bits (121), Expect = 4e-60 Identities = 238/277 (85%) Strand = Plus / Minus Query: 258 ctcaaggctttagcaccaatgacaaaccaacttttgtgctcttctcaattgccttggtgt 317 ||||| |||| |||||||| ||||| |||||||| ||||||||||||||||||||||||| Sbjct: 902 ctcaatgcttgagcaccaaggacaagccaactttcgtgctcttctcaattgccttggtgt 843 Query: 318 caacctcgccggagatggtgacgagtgactttggtcgccattcatgctggacaagggcac 377 ||||||| || |||||||||| || || || || ||||||||||||||||| || || | Sbjct: 842 caacctcaccagagatggtgattagcgatttgggacgccattcatgctggacgagcgcgc 783 Query: 378 tggccatgccataattgttgaagcgtgccttcacactggtgtgcgggtccaatgagtgct 437 ||||||||||||| ||||||||||| |||||||| | ||||| |||||||||||||||| Sbjct: 782 tggccatgccatagttgttgaagcgagccttcactgtcgtgtgagggtccaatgagtgct 723 Query: 438 gcgatccaaatatcaatgtgctctcgttccttgggaagttgtgggacagctctgctccaa 497 | || ||||| |||| ||||||||| ||||||| |||| ||||||||||||| ||||| | Sbjct: 722 gggacccaaagatcagtgtgctctcattccttgagaagctgtgggacagctcagctccta 663 Query: 498 cagcagtgcttgaatgtgactttactaagtggtagta 534 | |||||| | ||||| |||||| | ||||||||| Sbjct: 662 cggcagtgttcgaatggtgctttaccaggtggtagta 626
>dbj|AK104419.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B06, full insert sequence Length = 1151 Score = 240 bits (121), Expect = 4e-60 Identities = 238/277 (85%) Strand = Plus / Minus Query: 258 ctcaaggctttagcaccaatgacaaaccaacttttgtgctcttctcaattgccttggtgt 317 ||||| |||| |||||||| ||||| |||||||| ||||||||||||||||||||||||| Sbjct: 907 ctcaatgcttgagcaccaaggacaagccaactttcgtgctcttctcaattgccttggtgt 848 Query: 318 caacctcgccggagatggtgacgagtgactttggtcgccattcatgctggacaagggcac 377 ||||||| || |||||||||| || || || || ||||||||||||||||| || || | Sbjct: 847 caacctcaccagagatggtgattagcgatttgggacgccattcatgctggacgagcgcgc 788 Query: 378 tggccatgccataattgttgaagcgtgccttcacactggtgtgcgggtccaatgagtgct 437 ||||||||||||| ||||||||||| |||||||| | ||||| |||||||||||||||| Sbjct: 787 tggccatgccatagttgttgaagcgagccttcactgtcgtgtgagggtccaatgagtgct 728 Query: 438 gcgatccaaatatcaatgtgctctcgttccttgggaagttgtgggacagctctgctccaa 497 | || ||||| |||| ||||||||| ||||||| |||| ||||||||||||| ||||| | Sbjct: 727 gggacccaaagatcagtgtgctctcattccttgagaagctgtgggacagctcagctccta 668 Query: 498 cagcagtgcttgaatgtgactttactaagtggtagta 534 | |||||| | ||||| |||||| | ||||||||| Sbjct: 667 cggcagtgttcgaatggtgctttaccaggtggtagta 631
>dbj|AK104055.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B09, full insert sequence Length = 1160 Score = 240 bits (121), Expect = 4e-60 Identities = 238/277 (85%) Strand = Plus / Minus Query: 258 ctcaaggctttagcaccaatgacaaaccaacttttgtgctcttctcaattgccttggtgt 317 ||||| |||| |||||||| ||||| |||||||| ||||||||||||||||||||||||| Sbjct: 918 ctcaatgcttgagcaccaaggacaagccaactttcgtgctcttctcaattgccttggtgt 859 Query: 318 caacctcgccggagatggtgacgagtgactttggtcgccattcatgctggacaagggcac 377 ||||||| || |||||||||| || || || || ||||||||||||||||| || || | Sbjct: 858 caacctcaccagagatggtgattagcgatttgggacgccattcatgctggacgagcgcgc 799 Query: 378 tggccatgccataattgttgaagcgtgccttcacactggtgtgcgggtccaatgagtgct 437 ||||||||||||| ||||||||||| |||||||| | ||||| |||||||||||||||| Sbjct: 798 tggccatgccatagttgttgaagcgagccttcactgtcgtgtgagggtccaatgagtgct 739 Query: 438 gcgatccaaatatcaatgtgctctcgttccttgggaagttgtgggacagctctgctccaa 497 | || ||||| |||| ||||||||| ||||||| |||| ||||||||||||| ||||| | Sbjct: 738 gggacccaaagatcagtgtgctctcattccttgagaagctgtgggacagctcagctccta 679 Query: 498 cagcagtgcttgaatgtgactttactaagtggtagta 534 | |||||| | ||||| |||||| | ||||||||| Sbjct: 678 cggcagtgttcgaatggtgctttaccaggtggtagta 642
>dbj|AK070745.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068C08, full insert sequence Length = 1216 Score = 240 bits (121), Expect = 4e-60 Identities = 238/277 (85%) Strand = Plus / Minus Query: 258 ctcaaggctttagcaccaatgacaaaccaacttttgtgctcttctcaattgccttggtgt 317 ||||| |||| |||||||| ||||| |||||||| ||||||||||||||||||||||||| Sbjct: 962 ctcaatgcttgagcaccaaggacaagccaactttcgtgctcttctcaattgccttggtgt 903 Query: 318 caacctcgccggagatggtgacgagtgactttggtcgccattcatgctggacaagggcac 377 ||||||| || |||||||||| || || || || ||||||||||||||||| || || | Sbjct: 902 caacctcaccagagatggtgattagcgatttgggacgccattcatgctggacgagcgcgc 843 Query: 378 tggccatgccataattgttgaagcgtgccttcacactggtgtgcgggtccaatgagtgct 437 ||||||||||||| ||||||||||| |||||||| | ||||| |||||||||||||||| Sbjct: 842 tggccatgccatagttgttgaagcgagccttcactgtcgtgtgagggtccaatgagtgct 783 Query: 438 gcgatccaaatatcaatgtgctctcgttccttgggaagttgtgggacagctctgctccaa 497 | || ||||| |||| ||||||||| ||||||| |||| ||||||||||||| ||||| | Sbjct: 782 gggacccaaagatcagtgtgctctcattccttgagaagctgtgggacagctcagctccta 723 Query: 498 cagcagtgcttgaatgtgactttactaagtggtagta 534 | |||||| | ||||| |||||| | ||||||||| Sbjct: 722 cggcagtgttcgaatggtgctttaccaggtggtagta 686
>ref|NM_192554.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 828 Score = 238 bits (120), Expect = 2e-59 Identities = 237/276 (85%) Strand = Plus / Minus Query: 259 tcaaggctttagcaccaatgacaaaccaacttttgtgctcttctcaattgccttggtgtc 318 |||| |||| |||||||| ||||| |||||||| |||||||||||||||||||||||||| Sbjct: 828 tcaatgcttgagcaccaaggacaagccaactttcgtgctcttctcaattgccttggtgtc 769 Query: 319 aacctcgccggagatggtgacgagtgactttggtcgccattcatgctggacaagggcact 378 |||||| || |||||||||| || || || || ||||||||||||||||| || || || Sbjct: 768 aacctcaccagagatggtgattagcgatttgggacgccattcatgctggacgagcgcgct 709 Query: 379 ggccatgccataattgttgaagcgtgccttcacactggtgtgcgggtccaatgagtgctg 438 |||||||||||| ||||||||||| |||||||| | ||||| ||||||||||||||||| Sbjct: 708 ggccatgccatagttgttgaagcgagccttcactgtcgtgtgagggtccaatgagtgctg 649 Query: 439 cgatccaaatatcaatgtgctctcgttccttgggaagttgtgggacagctctgctccaac 498 || ||||| |||| ||||||||| ||||||| |||| ||||||||||||| ||||| || Sbjct: 648 ggacccaaagatcagtgtgctctcattccttgagaagctgtgggacagctcagctcctac 589 Query: 499 agcagtgcttgaatgtgactttactaagtggtagta 534 |||||| | ||||| |||||| | ||||||||| Sbjct: 588 ggcagtgttcgaatggtgctttaccaggtggtagta 553
>emb|X73429.1|ZMPOR1 Z.mays mRNA for porin Length = 1810 Score = 153 bits (77), Expect = 7e-34 Identities = 212/257 (82%) Strand = Plus / Minus Query: 284 ccaacttttgtgctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagt 343 |||||||| |||||||||||||| |||||||||||||| || || ||||||||||||| Sbjct: 814 ccaactttcgtgctcttctcaatcgccttggtgtcaacgtcaccagagatggtgacgaag 755 Query: 344 gactttggtcgccattcatgctggacaagggcactggccatgccataattgttgaagcgt 403 ||||| || ||||||||||||||||||||||||||||||||||| || |||||||| ||| Sbjct: 754 gacttgggacgccattcatgctggacaagggcactggccatgccgtagttgttgaaacgt 695 Query: 404 gccttcacactggtgtgcgggtccaatgagtgctgcgatccaaatatcaatgtgctctcg 463 | ||| | | | ||||| || |||| |||||||| || || || || | |||||||| Sbjct: 694 gtcttgatagtcgtgtggggatccagcgagtgctgggacccgaagattagcgtgctctca 635 Query: 464 ttccttgggaagttgtgggacagctctgctccaacagcagtgcttgaatgtgactttact 523 || || | | | |||| |||| ||| |||||||||||||||| |||||| |||||| Sbjct: 634 tttctcgacatgctgtgagacaactcagctccaacagcagtgcctgaatggttctttacc 575 Query: 524 aagtggtagtaagacgc 540 | ||||||||| ||||| Sbjct: 574 aggtggtagtaggacgc 558
>gb|AY109870.1| Zea mays CL2099_1 mRNA sequence Length = 1799 Score = 153 bits (77), Expect = 7e-34 Identities = 212/257 (82%) Strand = Plus / Minus Query: 284 ccaacttttgtgctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagt 343 |||||||| |||||||||||||| |||||||||||||| || || ||||||||||||| Sbjct: 814 ccaactttcgtgctcttctcaatcgccttggtgtcaacgtcaccagagatggtgacgaag 755 Query: 344 gactttggtcgccattcatgctggacaagggcactggccatgccataattgttgaagcgt 403 ||||| || ||||||||||||||||||||||||||||||||||| || |||||||| ||| Sbjct: 754 gacttgggacgccattcatgctggacaagggcactggccatgccgtagttgttgaaacgt 695 Query: 404 gccttcacactggtgtgcgggtccaatgagtgctgcgatccaaatatcaatgtgctctcg 463 | ||| | | | ||||| || |||| |||||||| || || || || | |||||||| Sbjct: 694 gtcttgatagtcgtgtggggatccagcgagtgctgggacccgaagattagcgtgctctca 635 Query: 464 ttccttgggaagttgtgggacagctctgctccaacagcagtgcttgaatgtgactttact 523 || || | | | |||| |||| ||| |||||||||||||||| |||||| |||||| Sbjct: 634 tttctcgacatgctgtgagacaactcagctccaacagcagtgcctgaatggttctttacc 575 Query: 524 aagtggtagtaagacgc 540 | ||||||||| ||||| Sbjct: 574 aggtggtagtaggacgc 558
>gb|AY106124.1| Zea mays PCO123686 mRNA sequence Length = 926 Score = 135 bits (68), Expect = 2e-28 Identities = 203/248 (81%) Strand = Plus / Minus Query: 293 gtgctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggt 352 |||||||||||||| || || |||||||| || || ||||||||||||| ||||| || Sbjct: 925 gtgctcttctcaatcgcgttagtgtcaacgtcaccagagatggtgacgaaggacttggga 866 Query: 353 cgccattcatgctggacaagggcactggccatgccataattgttgaagcgtgccttcaca 412 ||||||||||||||||||||||||||||||||||| || |||||||| |||| ||| | | Sbjct: 865 cgccattcatgctggacaagggcactggccatgccgtagttgttgaaacgtgtcttgata 806 Query: 413 ctggtgtgcgggtccaatgagtgctgcgatccaaatatcaatgtgctctcgttccttggg 472 | ||||| || |||| |||||||| || || || || | |||||||| || || | Sbjct: 805 gtcgtgtggggatccagcgagtgctgggacccgaagattagcgtgctctcatttctcgac 746 Query: 473 aagttgtgggacagctctgctccaacagcagtgcttgaatgtgactttactaagtggtag 532 | | |||| |||| ||| |||||||||||||||| |||||| |||||| ||||||||| Sbjct: 745 atgctgtgagacaactcagctccaacagcagtgcctgaatggttctttaccaagtggtag 686 Query: 533 taagacgc 540 || ||||| Sbjct: 685 taggacgc 678
>gb|AF178952.1|AF178952 Zea mays voltage-dependent anion channel protein 2 (vdac2) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1129 Score = 85.7 bits (43), Expect = 1e-13 Identities = 103/123 (83%) Strand = Plus / Minus Query: 295 gctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggtcg 354 ||||||||| || ||||||||||| ||||| |||||||||||| |||||||| || | Sbjct: 881 gctcttctcgatggccttggtgtccacctccgtggagatggtgaccagtgacttgggcct 822 Query: 355 ccattcatgctggacaagggcactggccatgccataattgttgaagcgtgccttcacact 414 ||| || || |||| || ||||| |||||||| || ||||||||||||||||||||| | Sbjct: 821 ccactcgtgttggatcagtgcacttgccatgccgtagttgttgaagcgtgccttcacagt 762 Query: 415 ggt 417 ||| Sbjct: 761 ggt 759
>gb|AY104198.1| Zea mays PCO099812 mRNA sequence Length = 1156 Score = 85.7 bits (43), Expect = 1e-13 Identities = 103/123 (83%) Strand = Plus / Minus Query: 295 gctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggtcg 354 ||||||||| || ||||||||||| ||||| |||||||||||| |||||||| || | Sbjct: 915 gctcttctcgatggccttggtgtccacctccgtggagatggtgaccagtgacttgggcct 856 Query: 355 ccattcatgctggacaagggcactggccatgccataattgttgaagcgtgccttcacact 414 ||| || || |||| || ||||| |||||||| || ||||||||||||||||||||| | Sbjct: 855 ccactcgtgttggatcagtgcacttgccatgccgtagttgttgaagcgtgccttcacagt 796 Query: 415 ggt 417 ||| Sbjct: 795 ggt 793
>gb|U79765.1|MCU79765 Mesembryanthemum crystallinum voltage-dependent anion-selective channel protein porin (VDAC) mRNA, complete cds Length = 1210 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 298 cttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggtcgcca 357 ||||||||| ||||||||||||||||| | |||| |||||| |||||||| || ||||| Sbjct: 860 cttctcaatggccttggtgtcaacctcagcagagaaggtgacaagtgacttggggcgcca 801 Query: 358 ttcatgctgga 368 ||||||||||| Sbjct: 800 ttcatgctgga 790
>ref|XM_475771.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 843 Score = 67.9 bits (34), Expect = 3e-08 Identities = 97/118 (82%) Strand = Plus / Minus Query: 295 gctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggtcg 354 |||||| || || |||||||| |||||||| ||||||||||||||| ||||| || | Sbjct: 807 gctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgacttgggcct 748 Query: 355 ccattcatgctggacaagggcactggccatgccataattgttgaagcgtgccttcaca 412 | || ||||||| || ||||||||||||||| | ||||||||||| ||||||||| Sbjct: 747 gaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgccttcaca 690 Score = 40.1 bits (20), Expect = 7.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 459 tctcgttccttgggaagttgtgggacagctctgctccaacagca 502 ||||||| || | |||| |||| | ||||||||||||||||||| Sbjct: 643 tctcgttgctcgagaagctgtgagccagctctgctccaacagca 600
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01, complete sequence Length = 147704 Score = 67.9 bits (34), Expect = 3e-08 Identities = 97/118 (82%) Strand = Plus / Minus Query: 295 gctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggtcg 354 |||||| || || |||||||| |||||||| ||||||||||||||| ||||| || | Sbjct: 69038 gctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgacttgggcct 68979 Query: 355 ccattcatgctggacaagggcactggccatgccataattgttgaagcgtgccttcaca 412 | || ||||||| || ||||||||||||||| | ||||||||||| ||||||||| Sbjct: 68978 gaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgccttcaca 68921 Score = 40.1 bits (20), Expect = 7.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 459 tctcgttccttgggaagttgtgggacagctctgctccaacagca 502 ||||||| || | |||| |||| | ||||||||||||||||||| Sbjct: 68874 tctcgttgctcgagaagctgtgagccagctctgctccaacagca 68831
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 67.9 bits (34), Expect = 3e-08 Identities = 97/118 (82%) Strand = Plus / Minus Query: 295 gctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggtcg 354 |||||| || || |||||||| |||||||| ||||||||||||||| ||||| || | Sbjct: 26424347 gctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgacttgggcct 26424288 Query: 355 ccattcatgctggacaagggcactggccatgccataattgttgaagcgtgccttcaca 412 | || ||||||| || ||||||||||||||| | ||||||||||| ||||||||| Sbjct: 26424287 gaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgccttcaca 26424230 Score = 40.1 bits (20), Expect = 7.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 459 tctcgttccttgggaagttgtgggacagctctgctccaacagca 502 ||||||| || | |||| |||| | ||||||||||||||||||| Sbjct: 26424183 tctcgttgctcgagaagctgtgagccagctctgctccaacagca 26424140
>emb|AJ251562.1|OSA251562 Oryza sativa mRNA for voltage-dependent anion channel (VDAC2 gene) Length = 1189 Score = 67.9 bits (34), Expect = 3e-08 Identities = 97/118 (82%) Strand = Plus / Minus Query: 295 gctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggtcg 354 |||||| || || |||||||| |||||||| ||||||||||||||| ||||| || | Sbjct: 846 gctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgacttgggcct 787 Query: 355 ccattcatgctggacaagggcactggccatgccataattgttgaagcgtgccttcaca 412 | || ||||||| || ||||||||||||||| | ||||||||||| ||||||||| Sbjct: 786 gaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgccttcaca 729 Score = 40.1 bits (20), Expect = 7.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 459 tctcgttccttgggaagttgtgggacagctctgctccaacagca 502 ||||||| || | |||| |||| | ||||||||||||||||||| Sbjct: 682 tctcgttgctcgagaagctgtgagccagctctgctccaacagca 639
>dbj|AK071833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121K13, full insert sequence Length = 1231 Score = 67.9 bits (34), Expect = 3e-08 Identities = 97/118 (82%) Strand = Plus / Minus Query: 295 gctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggtcg 354 |||||| || || |||||||| |||||||| ||||||||||||||| ||||| || | Sbjct: 890 gctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgacttgggcct 831 Query: 355 ccattcatgctggacaagggcactggccatgccataattgttgaagcgtgccttcaca 412 | || ||||||| || ||||||||||||||| | ||||||||||| ||||||||| Sbjct: 830 gaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgccttcaca 773 Score = 40.1 bits (20), Expect = 7.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 459 tctcgttccttgggaagttgtgggacagctctgctccaacagca 502 ||||||| || | |||| |||| | ||||||||||||||||||| Sbjct: 726 tctcgttgctcgagaagctgtgagccagctctgctccaacagca 683
>gb|BT016491.1| Zea mays clone Contig324 mRNA sequence Length = 1330 Score = 63.9 bits (32), Expect = 5e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 295 gctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggtcg 354 |||||||||||| | ||| || || ||||| | ||||||||||| || |||||||| | Sbjct: 947 gctcttctcaatggtctttgtatcgacctcagccgagatggtgaccagcgactttggcct 888 Query: 355 ccattcatgctggacaagggcactggccatgccataattgttgaagcgtgccttca 410 ||| |||||||||| ||||| ||||| ||||| | ||||||| ||||||||||| Sbjct: 887 ccactcatgctggatcagggcgctggctttgccagagttgttgatgcgtgccttca 832
>emb|Z25540.1|PSPOR1MR P.sativum pspor1 mRNA encoding porin Length = 1149 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 296 ctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggtcgc 355 ||||| ||||| ||||||||||| ||||| | || ||||||| |||||| ||||| ||| Sbjct: 845 ctcttttcaatggccttggtgtctacctcacttgaaatggtgatgagtgattttggacgc 786 Query: 356 cattcatgctggacaagggcactggccatgcc 387 ||||||||||| | ||| ||||| ||| |||| Sbjct: 785 cattcatgctgaataagagcactcgccttgcc 754
>gb|AF178950.1|AF178950 Zea mays voltage-dependent anion channel protein 1a (vdac1a) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1179 Score = 63.9 bits (32), Expect = 5e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 295 gctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggtcg 354 ||||||||| || | ||| ||||| |||||| | ||||||||||| || |||||||| | Sbjct: 887 gctcttctcgatggtctttgtgtcgacctcggccgagatggtgaccagcgactttggcct 828 Query: 355 ccattcatgctggacaagggcactggccatgccataattgttgaagcgtgccttca 410 ||| || ||||||| |||||||||||| ||||| | ||||| | ||| ||||||| Sbjct: 827 ccactcgtgctggatcagggcactggccttgccagagttgttaatgcgggccttca 772
>gb|AY104870.1| Zea mays PCO081914 mRNA sequence Length = 1445 Score = 63.9 bits (32), Expect = 5e-07 Identities = 95/116 (81%) Strand = Plus / Minus Query: 295 gctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggtcg 354 ||||||||| || | ||| ||||| |||||| | ||||||||||| || |||||||| | Sbjct: 998 gctcttctcgatggtctttgtgtcgacctcggccgagatggtgaccagcgactttggcct 939 Query: 355 ccattcatgctggacaagggcactggccatgccataattgttgaagcgtgccttca 410 ||| || ||||||| |||||||||||| ||||| | ||||| | ||| ||||||| Sbjct: 938 ccactcgtgctggatcagggcactggccttgccagagttgttaatgcgggccttca 883
>gb|AY316738.1| Lotus corniculatus var. japonicus VDAC1.2 mRNA, complete cds Length = 1103 Score = 60.0 bits (30), Expect = 8e-06 Identities = 93/114 (81%) Strand = Plus / Minus Query: 299 ttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggtcgccat 358 |||||||| ||||| ||||||||||| || || ||||||| || |||||| | ||||| Sbjct: 818 ttctcaatggccttagtgtcaacctccccagaaatggtgaagaatgacttggcacgccac 759 Query: 359 tcatgctggacaagggcactggccatgccataattgttgaagcgtgccttcaca 412 |||||||||| ||| ||| | ||| ||||| ||||||| ||| ||||||||| Sbjct: 758 tcatgctggataagagcatttgccttgccaaggttgttgacgcgagccttcaca 705
>emb|X82149.1|TAVDAC2 T.aestivum VDAC2 mRNA for voltage dependent anion channel Length = 1174 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 295 gctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactt 348 |||||||||||| |||||||||||||||||| ||||| ||||| ||| ||||| Sbjct: 786 gctcttctcaatggccttggtgtcaacctcggtggagaaggtgatgagagactt 733
>dbj|AP006692.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT06K23, TM0391, complete sequence Length = 98505 Score = 60.0 bits (30), Expect = 8e-06 Identities = 93/114 (81%) Strand = Plus / Minus Query: 299 ttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggtcgccat 358 |||||||| ||||| ||||||||||| || || ||||||| || |||||| | ||||| Sbjct: 31008 ttctcaatggccttagtgtcaacctccccagaaatggtgaagaatgacttggcacgccac 30949 Query: 359 tcatgctggacaagggcactggccatgccataattgttgaagcgtgccttcaca 412 |||||||||| ||| ||| | ||| ||||| ||||||| ||| ||||||||| Sbjct: 30948 tcatgctggataagagcatttgccttgccaaggttgttgacgcgagccttcaca 30895 Score = 44.1 bits (22), Expect = 0.47 Identities = 43/50 (86%) Strand = Plus / Minus Query: 299 ttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactt 348 |||||||| ||||| ||||||||||| || || ||||||| || |||||| Sbjct: 42094 ttctcaatggccttagtgtcaacctcaccagaaatggtgaagaatgactt 42045
>gb|AY316737.1| Lotus corniculatus var. japonicus VDAC1.1 mRNA, complete cds Length = 1203 Score = 50.1 bits (25), Expect = 0.008 Identities = 61/73 (83%) Strand = Plus / Minus Query: 296 ctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggtcgc 355 ||||| ||||| ||||||||||| ||||| || |||||||| | || |||||| || ||| Sbjct: 873 ctcttttcaatggccttggtgtctacctccccagagatggtaaagaatgacttagggcgc 814 Query: 356 cattcatgctgga 368 || || ||||||| Sbjct: 813 cactcgtgctgga 801
>dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40C04, TM0199, complete sequence Length = 123325 Score = 50.1 bits (25), Expect = 0.008 Identities = 61/73 (83%) Strand = Plus / Plus Query: 296 ctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggtcgc 355 ||||| ||||| ||||||||||| ||||| || |||||||| | || |||||| || ||| Sbjct: 119488 ctcttttcaatggccttggtgtctacctccccagagatggtaaagaatgacttagggcgc 119547 Query: 356 cattcatgctgga 368 || || ||||||| Sbjct: 119548 cactcgtgctgga 119560
>dbj|AP004901.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT13M13, TM0051b, complete sequence Length = 54022 Score = 50.1 bits (25), Expect = 0.008 Identities = 61/73 (83%) Strand = Plus / Minus Query: 296 ctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggtcgc 355 ||||| ||||| ||||||||||| ||||| || |||||||| | || |||||| || ||| Sbjct: 8730 ctcttttcaatggccttggtgtctacctccccagagatggtaaagaatgacttagggcgc 8671 Query: 356 cattcatgctgga 368 || || ||||||| Sbjct: 8670 cactcgtgctgga 8658
>gb|BT016888.1| Zea mays clone Contig721 mRNA sequence Length = 1209 Score = 48.1 bits (24), Expect = 0.030 Identities = 93/116 (80%) Strand = Plus / Plus Query: 295 gctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggtcg 354 ||||||||| || | ||| | ||| |||||| | ||||||| ||| || |||||||| | Sbjct: 306 gctcttctcgatgggctttgggtcgacctcggccgagatggggaccagcgactttggcct 365 Query: 355 ccattcatgctggacaagggcactggccatgccataattgttgaagcgtgccttca 410 ||| || ||||||| |||||||||||| ||||| | ||||| | ||| ||||||| Sbjct: 366 ccactcgtgctggatcagggcactggccttgccagagttgttaatgcgggccttca 421
>emb|X80388.1|STPORIN3 S.tuberosum pPOM36I mRNA for 36kDA porinI Length = 1030 Score = 48.1 bits (24), Expect = 0.030 Identities = 78/96 (81%) Strand = Plus / Minus Query: 295 gctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggtcg 354 |||||| ||||||||| |||||||||| || || || || |||| ||| || |||||||| Sbjct: 798 gctcttttcaattgccctggtgtcaacttcaccagatattgtgaagagggattttggtcg 739 Query: 355 ccattcatgctggacaagggcactggccatgccata 390 ||| || || |||| || ||||| ||| ||||||| Sbjct: 738 ccactcgtgttggatgagagcacttgccttgccata 703
>gb|AF178951.1|AF178951 Zea mays voltage-dependent anion channel protein 1b (vdac1b) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1175 Score = 48.1 bits (24), Expect = 0.030 Identities = 93/116 (80%) Strand = Plus / Minus Query: 295 gctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggtcg 354 |||||||||||| | ||| || || ||||| | ||||||||||| || |||||||| | Sbjct: 942 gctcttctcaatggtctttgtatcgacctcagccgagatggtgaccagcgactttggcct 883 Query: 355 ccattcatgctggacaagggcactggccatgccataattgttgaagcgtgccttca 410 ||| |||||||||| ||| | ||||| |||| | ||||||| ||||||||||| Sbjct: 882 ccactcatgctggatcaggacgctggctttgcccgagttgttgatgcgtgccttca 827
>emb|X80387.1|STPORIN2 S.tuberosum pPOM36II mRNA for 36kDa porinII Length = 1060 Score = 46.1 bits (23), Expect = 0.12 Identities = 53/63 (84%) Strand = Plus / Minus Query: 295 gctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgactttggtcg 354 |||||| ||||||||| |||||||||| || || || || |||| ||| || |||||||| Sbjct: 838 gctcttttcaattgccctggtgtcaacttcaccagatattgtgaagagggattttggtcg 779 Query: 355 cca 357 ||| Sbjct: 778 cca 776
>ref|XM_450604.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1124 Score = 44.1 bits (22), Expect = 0.47 Identities = 97/122 (79%) Strand = Plus / Minus Query: 290 tttgtgctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgacttt 349 |||| |||||| ||||| |||||||||||||| || | |||||||| | |||||| Sbjct: 883 tttgagctcttgtcaatggccttggtgtcaacttctgctgagatggtccacacagacttt 824 Query: 350 ggtcgccattcatgctggacaagggcactggccatgccataattgttgaagcgtgccttc 409 || | ||| || ||||||| || || |||||| |||| ||||||||||||| |||||| Sbjct: 823 ggcctccactcgtgctggagcagcgcgctggccttgccggaattgttgaagcgggccttc 764 Query: 410 ac 411 || Sbjct: 763 ac 762
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.47 Identities = 97/122 (79%) Strand = Plus / Minus Query: 290 tttgtgctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgacttt 349 |||| |||||| ||||| |||||||||||||| || | |||||||| | |||||| Sbjct: 11754925 tttgagctcttgtcaatggccttggtgtcaacttctgctgagatggtccacacagacttt 11754866 Query: 350 ggtcgccattcatgctggacaagggcactggccatgccataattgttgaagcgtgccttc 409 || | ||| || ||||||| || || |||||| |||| ||||||||||||| |||||| Sbjct: 11754865 ggcctccactcgtgctggagcagcgcgctggccttgccggaattgttgaagcgggccttc 11754806 Query: 410 ac 411 || Sbjct: 11754805 ac 11754804
>gb|AC026205.6|AC026205 Homo sapiens chromosome 3 clone RP11-61I9 map 3p, complete sequence Length = 176669 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 475 gttgtgggacagctctgctcca 496 |||||||||||||||||||||| Sbjct: 141517 gttgtgggacagctctgctcca 141496
>gb|AC024159.4|AC024159 Homo sapiens chromosome 3 clone RP11-255K15 map 3p, complete sequence Length = 195544 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 475 gttgtgggacagctctgctcca 496 |||||||||||||||||||||| Sbjct: 76459 gttgtgggacagctctgctcca 76480
>gb|AC026197.3|AC026197 Homo sapiens chromosome 3 clone RP11-483G20 map 3p, complete sequence Length = 202083 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 475 gttgtgggacagctctgctcca 496 |||||||||||||||||||||| Sbjct: 145397 gttgtgggacagctctgctcca 145418
>gb|AC020755.3|AC020755 Homo sapiens chromosome 3 clone RP11-3D22 map 3p, complete sequence Length = 166076 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 475 gttgtgggacagctctgctcca 496 |||||||||||||||||||||| Sbjct: 110400 gttgtgggacagctctgctcca 110421
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711F01 Length = 193091 Score = 44.1 bits (22), Expect = 0.47 Identities = 97/122 (79%) Strand = Plus / Minus Query: 290 tttgtgctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgacttt 349 |||| |||||| ||||| |||||||||||||| || | |||||||| | |||||| Sbjct: 189559 tttgagctcttgtcaatggccttggtgtcaacttctgctgagatggtccacacagacttt 189500 Query: 350 ggtcgccattcatgctggacaagggcactggccatgccataattgttgaagcgtgccttc 409 || | ||| || ||||||| || || |||||| |||| ||||||||||||| |||||| Sbjct: 189499 ggcctccactcgtgctggagcagcgcgctggccttgccggaattgttgaagcgggccttc 189440 Query: 410 ac 411 || Sbjct: 189439 ac 189438
>emb|Y18104.1|OSA18104 Oryza sativa mRNA for voltage-dependent anion channel Length = 1093 Score = 44.1 bits (22), Expect = 0.47 Identities = 97/122 (79%) Strand = Plus / Minus Query: 290 tttgtgctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgacttt 349 |||| |||||| ||||| |||||||||||||| || | |||||||| | |||||| Sbjct: 820 tttgagctcttgtcaatggccttggtgtcaacttctgctgagatggtccacacagacttt 761 Query: 350 ggtcgccattcatgctggacaagggcactggccatgccataattgttgaagcgtgccttc 409 || | ||| || ||||||| || || |||||| |||| ||||||||||||| |||||| Sbjct: 760 ggcctccactcgtgctggagcagcgcgctggccttgccggaattgttgaagcgggccttc 701 Query: 410 ac 411 || Sbjct: 700 ac 699
>dbj|AK072129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126C04, full insert sequence Length = 3071 Score = 44.1 bits (22), Expect = 0.47 Identities = 97/122 (79%) Strand = Plus / Minus Query: 290 tttgtgctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgacttt 349 |||| |||||| ||||| |||||||||||||| || | |||||||| | |||||| Sbjct: 2830 tttgagctcttgtcaatggccttggtgtcaacttctgctgagatggtccacacagacttt 2771 Query: 350 ggtcgccattcatgctggacaagggcactggccatgccataattgttgaagcgtgccttc 409 || | ||| || ||||||| || || |||||| |||| ||||||||||||| |||||| Sbjct: 2770 ggcctccactcgtgctggagcagcgcgctggccttgccggaattgttgaagcgggccttc 2711 Query: 410 ac 411 || Sbjct: 2710 ac 2709
>dbj|AK061261.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-C01, full insert sequence Length = 1125 Score = 44.1 bits (22), Expect = 0.47 Identities = 97/122 (79%) Strand = Plus / Minus Query: 290 tttgtgctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgacttt 349 |||| |||||| ||||| |||||||||||||| || | |||||||| | |||||| Sbjct: 883 tttgagctcttgtcaatggccttggtgtcaacttctgctgagatggtccacacagacttt 824 Query: 350 ggtcgccattcatgctggacaagggcactggccatgccataattgttgaagcgtgccttc 409 || | ||| || ||||||| || || |||||| |||| ||||||||||||| |||||| Sbjct: 823 ggcctccactcgtgctggagcagcgcgctggccttgccggaattgttgaagcgggccttc 764 Query: 410 ac 411 || Sbjct: 763 ac 762
>dbj|AK060652.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H05, full insert sequence Length = 1242 Score = 44.1 bits (22), Expect = 0.47 Identities = 97/122 (79%) Strand = Plus / Minus Query: 290 tttgtgctcttctcaattgccttggtgtcaacctcgccggagatggtgacgagtgacttt 349 |||| |||||| ||||| |||||||||||||| || | |||||||| | |||||| Sbjct: 897 tttgagctcttgtcaatggccttggtgtcaacttctgctgagatggtccacacagacttt 838 Query: 350 ggtcgccattcatgctggacaagggcactggccatgccataattgttgaagcgtgccttc 409 || | ||| || ||||||| || || |||||| |||| ||||||||||||| |||||| Sbjct: 837 ggcctccactcgtgctggagcagcgcgctggccttgccggaattgttgaagcgggccttc 778 Query: 410 ac 411 || Sbjct: 777 ac 776
>gb|AC024162.5| Homo sapiens chromosome 3 clone RP11-320K1 map 3p, complete sequence Length = 173370 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 475 gttgtgggacagctctgctcca 496 |||||||||||||||||||||| Sbjct: 164050 gttgtgggacagctctgctcca 164071
>gb|AC026167.5| Homo sapiens chromosome 3 clone RP11-140B10 map 3p, complete sequence Length = 188867 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 475 gttgtgggacagctctgctcca 496 |||||||||||||||||||||| Sbjct: 2179 gttgtgggacagctctgctcca 2200
>gb|AC124830.8| Mus musculus chromosome 17, clone RP24-165B21, complete sequence Length = 176889 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 gatggcctggggccatgttat 204 ||||||||||||||||||||| Sbjct: 106185 gatggcctggggccatgttat 106205
>gb|AC139214.12| Mus musculus chromosome 17, clone RP23-345D6, complete sequence Length = 286283 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 184 gatggcctggggccatgttat 204 ||||||||||||||||||||| Sbjct: 268313 gatggcctggggccatgttat 268293
>emb|AL031595.4|HS671O14 Human DNA sequence from clone RP4-671O14 on chromosome 22q13.2-13.33, complete sequence Length = 102739 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 tttccaaaacattggtcccag 249 ||||||||||||||||||||| Sbjct: 57980 tttccaaaacattggtcccag 58000
>gb|DQ072165.1| Phaseolus coccineus mitochrondrial voltage-dependent anion-selective channel mRNA, complete cds; nuclear gene for mitochondrial product Length = 831 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 296 ctcttctcaattgccttggtgtcaacctc 324 ||||||||||| ||||||||||| ||||| Sbjct: 794 ctcttctcaatggccttggtgtctacctc 766
>gb|DQ314493.1| Haloquadratum walsbyi clone 2B08 sequence Length = 38670 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 342 gtgactttggtcgccattcat 362 ||||||||||||||||||||| Sbjct: 2909 gtgactttggtcgccattcat 2889
>gb|AC154329.3| Mus musculus BAC clone RP23-266K11 from chromosome 13, complete sequence Length = 188096 Score = 42.1 bits (21), Expect = 1.9 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 124 cctaggaaacagattatgtggacaaaggaggaa 156 |||||||||||| |||||||||||||| ||||| Sbjct: 95524 cctaggaaacag-ttatgtggacaaagaaggaa 95493
>ref|NM_191753.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 954 Score = 40.1 bits (20), Expect = 7.3 Identities = 83/104 (79%) Strand = Plus / Minus Query: 308 gccttggtgtcaacctcgccggagatggtgacgagtgactttggtcgccattcatgctgg 367 ||||||||||| |||||| |||||| || | || ||||| |||| ||| || |||||| Sbjct: 905 gccttggtgtcgacctcggcggagagcgttaagaaagacttgggtctccactcgtgctgg 846 Query: 368 acaagggcactggccatgccataattgttgaagcgtgccttcac 411 | ||||| ||| ||||||| | |||||| |||| |||||||| Sbjct: 845 atgagggcgctgaccatgccgtggttgttgtagcgcgccttcac 802
>emb|AL589794.7| Human DNA sequence from clone RP11-564C4 on chromosome 10 Contains the 3' end of the gene for apobec-1 complementation factor (ACF) (ASP), the gene for a novel protein similar to N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 (ASAH2), the cathepsin L-like 2 (CTSLL2) pseudogene, three novel pseudogenes (KIAA1553), a novel gene, a protein geranylgeranyltransferase type I beta subunit (PGGT1B) pseudogene and a CpG island, complete sequence Length = 178899 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 caaaatgaatgcaccaagag 184 |||||||||||||||||||| Sbjct: 167964 caaaatgaatgcaccaagag 167945
>emb|AL512366.12| Human DNA sequence from clone RP11-449O16 on chromosome 10 Contains the gene for apobec-1 complementation factor (ACF) (ASP) and the 3' end of a variant of the gene for a novel protein similar to N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 (ASAH2), complete sequence Length = 175849 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 caaaatgaatgcaccaagag 184 |||||||||||||||||||| Sbjct: 30970 caaaatgaatgcaccaagag 30951
>emb|AL161783.20| Human DNA sequence from clone RP11-334P12 on chromosome 9 Contains the ACO1 gene for aconitase 1, soluble and the 3' end of the gene for DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide (RIG-I), complete sequence Length = 111692 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aatgacaaaccaacttttgt 294 |||||||||||||||||||| Sbjct: 8533 aatgacaaaccaacttttgt 8552
>gb|AC158149.3| Mus musculus chromosome 5, clone RP24-296L6, complete sequence Length = 155517 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gcagaactgtttttctttcc 233 |||||||||||||||||||| Sbjct: 50185 gcagaactgtttttctttcc 50204
>gb|AC098615.2| Homo sapiens chromosome 3 clone RP11-268I20, complete sequence Length = 167486 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 235 aaacattggtcccagccatgcatctcaa 262 ||||||||||| ||||||||||| |||| Sbjct: 153756 aaacattggtcacagccatgcatatcaa 153783
>gb|AC117464.4| Homo sapiens 3 BAC RP11-412N9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154728 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 218 aactgtttttctttccaaaacatt 241 |||||||||| ||||||||||||| Sbjct: 126296 aactgtttttatttccaaaacatt 126319
>gb|AC008558.7|AC008558 Homo sapiens chromosome 5 clone CTC-531G16, complete sequence Length = 210532 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 aatccagcagaactgttttt 227 |||||||||||||||||||| Sbjct: 53340 aatccagcagaactgttttt 53359
>gb|AC160407.6| Mus musculus 10 BAC RP24-445P5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 186970 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 gctttagcaccaatgacaaa 283 |||||||||||||||||||| Sbjct: 113478 gctttagcaccaatgacaaa 113459
>gb|AC068800.28|AC068800 Homo sapiens 12 BAC RP11-557L8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 89183 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 445 aaatatcaatgtgctctcgttcct 468 |||||||||||||||||| ||||| Sbjct: 4401 aaatatcaatgtgctctccttcct 4378
>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683B11 Length = 155955 Score = 40.1 bits (20), Expect = 7.3 Identities = 83/104 (79%) Strand = Plus / Plus Query: 308 gccttggtgtcaacctcgccggagatggtgacgagtgactttggtcgccattcatgctgg 367 ||||||||||| |||||| |||||| || | || ||||| |||| ||| || |||||| Sbjct: 7882 gccttggtgtcgacctcggcggagagcgttaagaaagacttgggtctccactcgtgctgg 7941 Query: 368 acaagggcactggccatgccataattgttgaagcgtgccttcac 411 | ||||| ||| ||||||| | |||||| |||| |||||||| Sbjct: 7942 atgagggcgctgaccatgccgtggttgttgtagcgcgccttcac 7985
>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131B07 Length = 109135 Score = 40.1 bits (20), Expect = 7.3 Identities = 83/104 (79%) Strand = Plus / Plus Query: 308 gccttggtgtcaacctcgccggagatggtgacgagtgactttggtcgccattcatgctgg 367 ||||||||||| |||||| |||||| || | || ||||| |||| ||| || |||||| Sbjct: 93518 gccttggtgtcgacctcggcggagagcgttaagaaagacttgggtctccactcgtgctgg 93577 Query: 368 acaagggcactggccatgccataattgttgaagcgtgccttcac 411 | ||||| ||| ||||||| | |||||| |||| |||||||| Sbjct: 93578 atgagggcgctgaccatgccgtggttgttgtagcgcgccttcac 93621
>gb|AC111039.13| Mus musculus chromosome 5, clone RP24-463M5, complete sequence Length = 141949 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gcagaactgtttttctttcc 233 |||||||||||||||||||| Sbjct: 89104 gcagaactgtttttctttcc 89123
>emb|CT030231.6| Mouse DNA sequence from clone RP24-331M15 on chromosome 14, complete sequence Length = 163967 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ctgtttttctttccaaaaca 239 |||||||||||||||||||| Sbjct: 116261 ctgtttttctttccaaaaca 116242
>gb|AC171198.1| Mus musculus BAC clone RP23-251J18 from chromosome 9, complete sequence Length = 178608 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 488 tctgctccaacagcagtgcttgaa 511 ||||||||| |||||||||||||| Sbjct: 45267 tctgctccagcagcagtgcttgaa 45244 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,230,749 Number of Sequences: 3902068 Number of extensions: 5230749 Number of successful extensions: 126547 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 126287 Number of HSP's gapped (non-prelim): 258 length of query: 540 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 517 effective length of database: 17,143,297,704 effective search space: 8863084912968 effective search space used: 8863084912968 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)