ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags27j17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472717.1| Oryza sativa (japonica cultivar-group), predic... 74 6e-10
2dbj|AK073427.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 6e-10
3dbj|AK066187.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 6e-10
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 68 4e-08
5dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic D... 68 4e-08
6dbj|AK102054.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
7dbj|AK099488.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
8dbj|AK101647.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 2e-07
9dbj|AP005729.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
10dbj|AP005550.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
11dbj|AK121936.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
12ref|NM_187649.1| Oryza sativa (japonica cultivar-group), predic... 60 9e-06
13dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 60 9e-06
14gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 60 9e-06
15emb|AL732533.4|CNS08C98 Oryza sativa chromosome 12, . BAC OSJNBa... 60 9e-06
16emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4,... 58 4e-05
17emb|AL662937.4|OSJN00140 Oryza sativa genomic DNA, chromosome 4,... 58 4e-05
18dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
19ref|NM_185894.1| Oryza sativa (japonica cultivar-group), mRNA 54 6e-04
20ref|XM_472683.1| Oryza sativa (japonica cultivar-group), predic... 54 6e-04
21emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4,... 54 6e-04
22dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
23dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
24ref|NM_195726.1| Oryza sativa (japonica cultivar-group) hypothet... 52 0.002
25gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 52 0.002
26gb|AC099774.6| Oryza sativa chromosome 10 BAC OSJNBa0073L20 geno... 52 0.002
27gb|AC090486.3| Genomic sequence for Oryza sativa (japonica cult... 52 0.002
28dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
29dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
30dbj|AK100836.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
31gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
32gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
33ref|XM_479331.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.009
34ref|XM_479329.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.009
35dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
36dbj|AK069929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
37dbj|AK066044.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
38gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.036
39dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.036
40gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.036
41dbj|AK066342.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.56
42emb|AL109843.25|HSDJ763G1 Human DNA sequence from clone RP4-763G... 42 2.2
43gb|U28941.1| Caenorhabditis elegans cosmid F31D5, complete sequence 40 8.8
44gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 8.8
45gb|AF490259.2| Chikungunya virus strain Ross, complete genome 40 8.8
46gb|AY358831.1| Homo sapiens clone DNA142930 MUC13 (UNQ6194) mRNA... 40 8.8
47emb|Z22556.1|PPPAS5GN P.pastoris PAS5 gene 40 8.8
48gb|DQ443544.1| Chikungunya virus strain LR2006_OPY1, complete ge... 40 8.8
49ref|NM_033049.2| Homo sapiens mucin 13, cell surface associated ... 40 8.8
50gb|AC060809.7| Homo sapiens chromosome 15, clone RP11-404B13, co... 40 8.8
51gb|AC023034.9| Homo sapiens, clone RP11-499F3, complete sequence 40 8.8
52gb|DP000053.1| Oryctolagus cuniculus target 126 genomic scaffold 40 8.8
53gb|AF286113.1|AF286113 Homo sapiens transmembrane mucin MUC13 (M... 40 8.8
54gb|AF294917.1|AF294917 Aplysia californica ribosomal protein S6 ... 40 8.8
55gb|AC026342.34| Homo sapiens 3 BAC RP11-559L12 (Roswell Park Can... 40 8.8
56gb|AF369024.2| Chikungunya virus strain S27-African prototype, c... 40 8.8
57emb|AL672254.9| Mouse DNA sequence from clone RP23-409H23 on chr... 40 8.8
58dbj|AB035807.1| Homo sapiens DRCC1 mRNA for down-regulated in co... 40 8.8 
>ref|XM_472717.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1446

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                    
Query: 407 tcgcttagggccagtcatctcaataagagaaccctgttccacaatgatgggatcatc 463
           |||||||||||||||||| || || || |||||||| ||||||||||||||||||||
Sbjct: 924 tcgcttagggccagtcatttcgatgagggaaccctgctccacaatgatgggatcatc 868



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                        
Query: 311  tgcaccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtc 370
            ||||||||| || |||||||||||||| || ||| | |||||| ||||||| ||||||||
Sbjct: 1020 tgcaccatcaatcagttgtagatcatcttcctctcgttctcctgtcttgattctcatgtc 961

             
Query: 371  a 371
            |
Sbjct: 960  a 960
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>dbj|AK073427.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044A13, full
            insert sequence
          Length = 2846

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                     
Query: 407  tcgcttagggccagtcatctcaataagagaaccctgttccacaatgatgggatcatc 463
            |||||||||||||||||| || || || |||||||| ||||||||||||||||||||
Sbjct: 1146 tcgcttagggccagtcatttcgatgagggaaccctgctccacaatgatgggatcatc 1090



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                        
Query: 311  tgcaccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtc 370
            ||||||||| || |||||||||||||| || ||| | |||||| ||||||| ||||||||
Sbjct: 1242 tgcaccatcaatcagttgtagatcatcttcctctcgttctcctgtcttgattctcatgtc 1183

             
Query: 371  a 371
            |
Sbjct: 1182 a 1182
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>dbj|AK066187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058P10, full
            insert sequence
          Length = 1829

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                     
Query: 407  tcgcttagggccagtcatctcaataagagaaccctgttccacaatgatgggatcatc 463
            |||||||||||||||||| || || || |||||||| ||||||||||||||||||||
Sbjct: 1211 tcgcttagggccagtcatttcgatgagggaaccctgctccacaatgatgggatcatc 1155



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                        
Query: 311  tgcaccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtc 370
            ||||||||| || |||||||||||||| || ||| | |||||| ||||||| ||||||||
Sbjct: 1307 tgcaccatcaatcagttgtagatcatcttcctctcgttctcctgtcttgattctcatgtc 1248

             
Query: 371  a 371
            |
Sbjct: 1247 a 1247
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                           
Query: 315     ccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtcaaac 374
               ||||| || |||| |||||||||||||||| | |||||||| || |||||||||||||||
Sbjct: 4938820 ccatcaatcagttctagatcatcctcttctcgatctcctttttttatcctcatgtcaaac 4938879

                 
Query: 375     tc 376
               ||
Sbjct: 4938880 tc 4938881



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                           
Query: 144     gaactgagagataaatcgaatccacactgcacttttgatatgataacatctattgtggcc 203
               ||||||||| |||||| ||| ||||  ||||| | |||||||||||| | ||| ||||||
Sbjct: 3446759 gaactgagatataaattgaaaccactttgcacatctgatatgataacttgtatggtggcc 3446818

                                                                          
Query: 204     tcaaatgcccaacgaacaagggctaaagtgatgtcaaccgcgccacaatctccattaat 262
               || |  |||||   |||| | ||||||||||| ||||| || |||||||| ||||||||
Sbjct: 3446819 tctacggcccagtaaacacgtgctaaagtgatatcaactgcaccacaatcaccattaat 3446877



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                 
Query: 327     tgtagatcatcctcttcttgctctcctttcttgatcctcatgtcaaactc 376
               ||||| ||||| | ||||||||||||||| || |||||||||||||||||
Sbjct: 3446942 tgtaggtcatctttttcttgctctcctttttttatcctcatgtcaaactc 3446991



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 225     gctaaagtgatgtcaaccgcgccacaat 252
               ||||||||||||||||| ||||||||||
Sbjct: 4938727 gctaaagtgatgtcaactgcgccacaat 4938754



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                          
Query: 50      tacagcaatcacatgtcttcttaagctacacgacccaccaata 92
               |||||||| ||||| ||||||||||| ||| ||| ||||||||
Sbjct: 3446665 tacagcaaccacatatcttcttaagccacatgactcaccaata 3446707
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>dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1012G11
          Length = 167168

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                          
Query: 315    ccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtcaaac 374
              ||||| || |||| |||||||||||||||| | |||||||| || |||||||||||||||
Sbjct: 121352 ccatcaatcagttctagatcatcctcttctcgatctcctttttttatcctcatgtcaaac 121411

                
Query: 375    tc 376
              ||
Sbjct: 121412 tc 121413



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 225    gctaaagtgatgtcaaccgcgccacaat 252
              ||||||||||||||||| ||||||||||
Sbjct: 121259 gctaaagtgatgtcaactgcgccacaat 121286
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>dbj|AK102054.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082C15, full
           insert sequence
          Length = 1326

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 315 ccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtcaaac 374
           ||||| || |||| |||||||||||||||| | |||||||| || |||||||||||||||
Sbjct: 779 ccatcaatcagttctagatcatcctcttctcgatctcctttttttatcctcatgtcaaac 720

             
Query: 375 tc 376
           ||
Sbjct: 719 tc 718



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 407 tcgcttagggccagtcatctcaataagagaaccctgttccacaatgatgggatcatc 463
           ||||||||||||| |||| |||||   ||||||||| | ||| ||||||||||||||
Sbjct: 688 tcgcttagggccaatcatttcaatgcaagaaccctgcttcacgatgatgggatcatc 632



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 225 gctaaagtgatgtcaaccgcgccacaat 252
           ||||||||||||||||| ||||||||||
Sbjct: 872 gctaaagtgatgtcaactgcgccacaat 845
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>dbj|AK099488.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026J10, full
            insert sequence
          Length = 4054

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                        
Query: 315  ccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtcaaac 374
            ||||| || |||| |||||||||||||||| | |||||||| || |||||||||||||||
Sbjct: 3110 ccatcaatcagttctagatcatcctcttctcgatctcctttttttatcctcatgtcaaac 3051

              
Query: 375  tc 376
            ||
Sbjct: 3050 tc 3049



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 225  gctaaagtgatgtcaaccgcgccacaat 252
            ||||||||||||||||| ||||||||||
Sbjct: 3203 gctaaagtgatgtcaactgcgccacaat 3176
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>dbj|AK101647.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055P18, full
            insert sequence
          Length = 3322

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                     
Query: 407  tcgcttagggccagtcatctcaataagagaaccctgttccacaatgatgggatcatc 463
            ||||||||| |||||||| || || || |||||||| ||||||||||||||||||||
Sbjct: 1098 tcgcttaggtccagtcatttcgatgagggaaccctgctccacaatgatgggatcatc 1042



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                        
Query: 311  tgcaccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtc 370
            ||||||||| || |||||||||||||| || ||| | |||||| ||||||| ||||||||
Sbjct: 1194 tgcaccatcaatcagttgtagatcatcttcctctcgttctcctgtcttgattctcatgtc 1135

             
Query: 371  a 371
            |
Sbjct: 1134 a 1134
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>dbj|AP005729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0069P02
          Length = 163033

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                          
Query: 144    gaactgagagataaatcgaatccacactgcacttttgatatgataacatctattgtggcc 203
              ||||||||| |||||| ||| ||||  ||||| | |||||||||||| | ||| ||||||
Sbjct: 162691 gaactgagatataaattgaaaccactttgcacatctgatatgataacttgtatggtggcc 162750

                                                                         
Query: 204    tcaaatgcccaacgaacaagggctaaagtgatgtcaaccgcgccacaatctccattaat 262
              || |  |||||   |||| | ||||||||||| ||||| || |||||||| ||||||||
Sbjct: 162751 tctacggcccagtaaacacgtgctaaagtgatatcaactgcaccacaatcaccattaat 162809



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                
Query: 327    tgtagatcatcctcttcttgctctcctttcttgatcctcatgtcaaactc 376
              ||||| ||||| | ||||||||||||||| || |||||||||||||||||
Sbjct: 162874 tgtaggtcatctttttcttgctctcctttttttatcctcatgtcaaactc 162923



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                         
Query: 50     tacagcaatcacatgtcttcttaagctacacgacccaccaata 92
              |||||||| ||||| ||||||||||| ||| ||| ||||||||
Sbjct: 162597 tacagcaaccacatatcttcttaagccacatgactcaccaata 162639
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>dbj|AP005550.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1058_F03
          Length = 150486

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                          
Query: 144    gaactgagagataaatcgaatccacactgcacttttgatatgataacatctattgtggcc 203
              ||||||||| |||||| ||| ||||  ||||| | |||||||||||| | ||| ||||||
Sbjct: 115240 gaactgagatataaattgaaaccactttgcacatctgatatgataacttgtatggtggcc 115299

                                                                         
Query: 204    tcaaatgcccaacgaacaagggctaaagtgatgtcaaccgcgccacaatctccattaat 262
              || |  |||||   |||| | ||||||||||| ||||| || |||||||| ||||||||
Sbjct: 115300 tctacggcccagtaaacacgtgctaaagtgatatcaactgcaccacaatcaccattaat 115358



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                
Query: 327    tgtagatcatcctcttcttgctctcctttcttgatcctcatgtcaaactc 376
              ||||| ||||| | ||||||||||||||| || |||||||||||||||||
Sbjct: 115423 tgtaggtcatctttttcttgctctcctttttttatcctcatgtcaaactc 115472



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                         
Query: 50     tacagcaatcacatgtcttcttaagctacacgacccaccaata 92
              |||||||| ||||| ||||||||||| ||| ||| ||||||||
Sbjct: 115146 tacagcaaccacatatcttcttaagccacatgactcaccaata 115188
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>dbj|AK121936.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107C02, full
            insert sequence
          Length = 1436

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Minus

                                                                        
Query: 144  gaactgagagataaatcgaatccacactgcacttttgatatgataacatctattgtggcc 203
            ||||||||| |||||| ||| ||||  ||||| | |||||||||||| | ||| ||||||
Sbjct: 1023 gaactgagatataaattgaaaccactttgcacatctgatatgataacttgtatggtggcc 964

                                                                       
Query: 204  tcaaatgcccaacgaacaagggctaaagtgatgtcaaccgcgccacaatctccattaat 262
            || |  |||||   |||| | ||||||||||| ||||| || |||||||| ||||||||
Sbjct: 963  tctacggcccagtaaacacgtgctaaagtgatatcaactgcaccacaatcaccattaat 905



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 327 tgtagatcatcctcttcttgctctcctttcttgatcctcatgtcaaactc 376
           ||||| ||||| | ||||| ||||||||| || |||||||||||||||||
Sbjct: 840 tgtaggtcatctttttcttactctcctttttttatcctcatgtcaaactc 791



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 50   tacagcaatcacatgtcttcttaagctacacgacccaccaata 92
            |||||||| ||||| ||||||||||| ||| ||| ||||||||
Sbjct: 1117 tacagcaaccacatatcttcttaagccacatgactcaccaata 1075
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>ref|NM_187649.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2874

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 410  cttagggccagtcatctcaataagagaaccctgttccacaatgatgggatcatctctg 467
            ||||||||||||||| || |||||||||||||| | |||   ||||||||||||||||
Sbjct: 2439 cttagggccagtcatttcgataagagaaccctggttcacggcgatgggatcatctctg 2382



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 327  tgtagatcatcctcttcttgctctcctttcttgatcctcatgtcaaactc 376
            ||||||||||| ||||||| ||| ||  | ||||| ||||||||||||||
Sbjct: 2522 tgtagatcatcttcttctttctccccagttttgattctcatgtcaaactc 2473
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                 
Query: 327     tgtagatcatcctcttcttgctctcctttcttgatcctcatgtcaaactc 376
               ||||||||||| ||||||| ||| || |||||||| ||||||||||||||
Sbjct: 6975102 tgtagatcatcttcttctttctccccattcttgattctcatgtcaaactc 6975053



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                
Query: 410     cttagggccagtcatctcaataagagaaccctg 442
               ||||||||||||||| ||||||| |||||||||
Sbjct: 6975019 cttagggccagtcatttcaataatagaaccctg 6974987
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                 
Query: 327     tgtagatcatcctcttcttgctctcctttcttgatcctcatgtcaaactc 376
               ||||||||||| ||||||| ||| || |||||||| ||||||||||||||
Sbjct: 6974981 tgtagatcatcttcttctttctccccattcttgattctcatgtcaaactc 6974932



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                
Query: 410     cttagggccagtcatctcaataagagaaccctg 442
               ||||||||||||||| ||||||| |||||||||
Sbjct: 6974898 cttagggccagtcatttcaataatagaaccctg 6974866
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>emb|AL732533.4|CNS08C98 Oryza sativa chromosome 12, . BAC OSJNBa0084K07 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 147611

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                
Query: 327    tgtagatcatcctcttcttgctctcctttcttgatcctcatgtcaaactc 376
              ||||||||||| ||||||| ||| || |||||||| ||||||||||||||
Sbjct: 105111 tgtagatcatcttcttctttctccccattcttgattctcatgtcaaactc 105160



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 410    cttagggccagtcatctcaataagagaaccctg 442
              ||||||||||||||| ||||||| |||||||||
Sbjct: 105194 cttagggccagtcatttcaataatagaaccctg 105226
to top
>emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006M15,
             complete sequence
          Length = 143109

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                         
Query: 311   tgcaccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtc 370
             ||||||||| || |||||||||||||| || ||| | |||||| ||||||| ||||||||
Sbjct: 98881 tgcaccatcaatcagttgtagatcatcttcctctcgttctcctgtcttgattctcatgtc 98940

              
Query: 371   a 371
             |
Sbjct: 98941 a 98941



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                         
Query: 311   tgcaccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtc 370
             ||||||||| || |||||||||||||| || ||| | |||||| ||||||| ||||||||
Sbjct: 73754 tgcaccatcaatcagttgtagatcatcttcctctcgttctcctgtcttgattctcatgtc 73813

              
Query: 371   a 371
             |
Sbjct: 73814 a 73814



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 439    cctgttccacaatgatgggatcatc 463
              |||| ||||||||||||||||||||
Sbjct: 100560 cctgctccacaatgatgggatcatc 100584



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 439   cctgttccacaatgatgggatcatc 463
             |||| ||||||||||||||||||||
Sbjct: 75431 cctgctccacaatgatgggatcatc 75455
to top
>emb|AL662937.4|OSJN00140 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027G07,
              complete sequence
          Length = 179021

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                          
Query: 311    tgcaccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtc 370
              ||||||||| || |||||||||||||| || ||| | |||||| ||||||| ||||||||
Sbjct: 178657 tgcaccatcaatcagttgtagatcatcttcctctcgttctcctgtcttgattctcatgtc 178716

               
Query: 371    a 371
              |
Sbjct: 178717 a 178717
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                            
Query: 311      tgcaccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtc 370
                ||||||||| || |||||||||||||| || ||| | |||||| ||||||| ||||||||
Sbjct: 22761685 tgcaccatcaatcagttgtagatcatcttcctctcgttctcctgtcttgattctcatgtc 22761744

                 
Query: 371      a 371
                |
Sbjct: 22761745 a 22761745



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                            
Query: 311      tgcaccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtc 370
                ||||||||| || |||||||||||||| || ||| | |||||| ||||||| ||||||||
Sbjct: 22736557 tgcaccatcaatcagttgtagatcatcttcctctcgttctcctgtcttgattctcatgtc 22736616

                 
Query: 371      a 371
                |
Sbjct: 22736617 a 22736617



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                           
Query: 313      caccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtca 371
                ||||||| || || |||||||||| ||| ||| | |||||| |||||||||||||||||
Sbjct: 22537828 caccatcaatcagctgtagatcattctcatctcgttctcctgtcttgatcctcatgtca 22537886



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 439      cctgttccacaatgatgggatcatc 463
                |||| ||||||||||||||||||||
Sbjct: 22763364 cctgctccacaatgatgggatcatc 22763388



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 439      cctgttccacaatgatgggatcatc 463
                |||| ||||||||||||||||||||
Sbjct: 22738234 cctgctccacaatgatgggatcatc 22738258
to top
>ref|NM_185894.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 549

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                       
Query: 311 tgcaccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtc 370
           ||||||||| ||||| ||||| ||||| | |||||| || ||| |||||||||||| |||
Sbjct: 111 tgcaccatcaattagctgtaggtcatctttttcttgttcgcctgtcttgatcctcacgtc 52

              
Query: 371 aaa 373
           |||
Sbjct: 51  aaa 49
to top
>ref|XM_472683.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1065

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 313 caccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtca 371
           ||||||| || || |||||||||| ||| ||| | |||||| |||||||||||||||||
Sbjct: 796 caccatcaatcagctgtagatcattctcatctcgttctcctgtcttgatcctcatgtca 738
to top
>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14,
              complete sequence
          Length = 175698

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                         
Query: 313    caccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtca 371
              ||||||| || || |||||||||| ||| ||| | |||||| |||||||||||||||||
Sbjct: 141583 caccatcaatcagctgtagatcattctcatctcgttctcctgtcttgatcctcatgtca 141641
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                            
Query: 311      tgcaccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtc 370
                ||||||||| ||||| ||||| ||||| | |||||| || ||| |||||||||||| |||
Sbjct: 26888939 tgcaccatcaattagctgtaggtcatctttttcttgttcgcctgtcttgatcctcacgtc 26888998

                   
Query: 371      aaa 373
                |||
Sbjct: 26888999 aaa 26889001



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                            
Query: 311      tgcaccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtc 370
                ||||||||| || || ||||| ||||| | |||||| || ||| ||||||||||||||||
Sbjct: 26942249 tgcaccatcaatcagctgtaggtcatctttttcttgttcacctgtcttgatcctcatgtc 26942308

                 
Query: 371      a 371
                |
Sbjct: 26942309 a 26942309



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                            
Query: 311      tgcaccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtc 370
                ||||||||| || || ||||| ||||| | |||||| || ||| ||||||||||||||||
Sbjct: 26925601 tgcaccatcaatcagctgtaggtcatctttttcttgttcacctgtcttgatcctcatgtc 26925660

                 
Query: 371      a 371
                |
Sbjct: 26925661 a 26925661



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 439      cctgttccacaatgatgggatcatc 463
                |||| ||||||||||||||||||||
Sbjct: 26944589 cctgctccacaatgatgggatcatc 26944613



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 439      cctgttccacaatgatgggatcatc 463
                |||| ||||||||||||||||||||
Sbjct: 26927945 cctgctccacaatgatgggatcatc 26927969
to top
>dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0503D09
          Length = 144443

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                         
Query: 311   tgcaccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtc 370
             ||||||||| ||||| ||||| ||||| | |||||| || ||| |||||||||||| |||
Sbjct: 37530 tgcaccatcaattagctgtaggtcatctttttcttgttcgcctgtcttgatcctcacgtc 37589

                
Query: 371   aaa 373
             |||
Sbjct: 37590 aaa 37592



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                         
Query: 311   tgcaccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtc 370
             ||||||||| || || ||||| ||||| | |||||| || ||| ||||||||||||||||
Sbjct: 90840 tgcaccatcaatcagctgtaggtcatctttttcttgttcacctgtcttgatcctcatgtc 90899

              
Query: 371   a 371
             |
Sbjct: 90900 a 90900



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                         
Query: 311   tgcaccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtc 370
             ||||||||| || || ||||| ||||| | |||||| || ||| ||||||||||||||||
Sbjct: 74192 tgcaccatcaatcagctgtaggtcatctttttcttgttcacctgtcttgatcctcatgtc 74251

              
Query: 371   a 371
             |
Sbjct: 74252 a 74252



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 439   cctgttccacaatgatgggatcatc 463
             |||| ||||||||||||||||||||
Sbjct: 93180 cctgctccacaatgatgggatcatc 93204



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 439   cctgttccacaatgatgggatcatc 463
             |||| ||||||||||||||||||||
Sbjct: 76536 cctgctccacaatgatgggatcatc 76560
to top
>ref|NM_195726.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0093I09.32), mRNA
          Length = 597

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 327 tgtagatcatcctcttcttgctctcctttcttgatcctcatgtcaaactc 376
           |||| ||||||||||||||| |||||| ||||||| ||||| ||| ||||
Sbjct: 146 tgtatatcatcctcttcttgttctcctgtcttgattctcatatcatactc 97
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 410    cttagggccagtcatctcaataagagaaccctgt 443
              ||||||||||||||| || |||||||||||||||
Sbjct: 437038 cttagggccagtcatttcgataagagaaccctgt 437005



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                
Query: 327    tgtagatcatcctcttcttgctctcctttcttgatcctcatgtcaaactc 376
              ||||||||||| ||||||| ||| ||  | ||||| ||||||||||||||
Sbjct: 437121 tgtagatcatcttcttctttctccccagttttgattctcatgtcaaactc 437072
to top
>gb|AC099774.6| Oryza sativa chromosome 10 BAC OSJNBa0073L20 genomic sequence, complete
             sequence
          Length = 147651

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 327   tgtagatcatcctcttcttgctctcctttcttgatcctcatgtcaaactc 376
             |||| ||||||||||||||| |||||| ||||||| ||||| ||| ||||
Sbjct: 78318 tgtatatcatcctcttcttgttctcctgtcttgattctcatatcatactc 78269
to top
>gb|AC090486.3| Genomic sequence for  Oryza sativa (japonica cultivar-group) cultivar
              Nipponbare  clone OSJNBa0093I09, from Chromosome 10,
              complete sequence
          Length = 172434

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 327    tgtagatcatcctcttcttgctctcctttcttgatcctcatgtcaaactc 376
              |||| ||||||||||||||| |||||| ||||||| ||||| ||| ||||
Sbjct: 168774 tgtatatcatcctcttcttgttctcctgtcttgattctcatatcatactc 168725
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                 
Query: 327     tgtagatcatcctcttcttgctctcctttcttgatcctcatgtcaaactc 376
               |||| ||||||||||||||| |||||| ||||||| ||||| ||| ||||
Sbjct: 8687677 tgtatatcatcctcttcttgttctcctgtcttgattctcatatcatactc 8687628
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 410    cttagggccagtcatctcaataagagaaccctgt 443
              ||||||||||||||| || |||||||||||||||
Sbjct: 437036 cttagggccagtcatttcgataagagaaccctgt 437003



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                
Query: 327    tgtagatcatcctcttcttgctctcctttcttgatcctcatgtcaaactc 376
              ||||||||||| ||||||| ||| ||  | ||||| ||||||||||||||
Sbjct: 437119 tgtagatcatcttcttctttctccccagttttgattctcatgtcaaactc 437070
to top
>dbj|AK100836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123E13, full
           insert sequence
          Length = 1514

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 327 tgtagatcatcctcttcttgctctcctttcttgatcctcatgtcaaactc 376
           |||| ||||||||||||||| |||||| ||||||| ||||| ||| ||||
Sbjct: 915 tgtatatcatcctcttcttgttctcctgtcttgattctcatatcatactc 866
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                 
Query: 327     tgtagatcatcctcttcttgctctcctttcttgatcctcatgtcaaactc 376
               |||| ||||||||||||||| |||||| ||||||| ||||| ||| ||||
Sbjct: 8692816 tgtatatcatcctcttcttgttctcctgtcttgattctcatatcatactc 8692767
to top
>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03,
             complete sequence
          Length = 116214

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 410   cttagggccagtcatctcaataagagaaccctgt 443
             ||||||||||||||| || |||||||||||||||
Sbjct: 35498 cttagggccagtcatttcgataagagaaccctgt 35465



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 327   tgtagatcatcctcttcttgctctcctttcttgatcctcatgtcaaactc 376
             ||||||||||| ||||||| ||| ||  | ||||| ||||||||||||||
Sbjct: 35581 tgtagatcatcttcttctttctccccagttttgattctcatgtcaaactc 35532
to top
>ref|XM_479331.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1777

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                        
Query: 311  tgcaccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtc 370
            ||||||||| || || ||||| ||||| | |||||| || ||| ||||||||||||||||
Sbjct: 1023 tgcaccatcaatcagctgtaggtcatctttttcttgttcacctgtcttgatcctcatgtc 964

             
Query: 371  a 371
            |
Sbjct: 963  a 963



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 435 gaaccctgttccacaatgatgggatcatc 463
           |||||||| ||||||||||||||||||||
Sbjct: 899 gaaccctgctccacaatgatgggatcatc 871
to top
>ref|XM_479329.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1814

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                       
Query: 311 tgcaccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtc 370
           ||||||||| || || ||||| ||||| | |||||| || ||| ||||||||||||||||
Sbjct: 996 tgcaccatcaatcagctgtaggtcatctttttcttgttcacctgtcttgatcctcatgtc 937

            
Query: 371 a 371
           |
Sbjct: 936 a 936



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 435 gaaccctgttccacaatgatgggatcatc 463
           |||||||| ||||||||||||||||||||
Sbjct: 872 gaaccctgctccacaatgatgggatcatc 844
to top
>dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1316_A04
          Length = 87144

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                        
Query: 311  tgcaccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtc 370
            ||||||||| || || ||||| ||||| | |||||| || ||| ||||||||||||||||
Sbjct: 6727 tgcaccatcaatcagctgtaggtcatctttttcttgttcacctgtcttgatcctcatgtc 6786

             
Query: 371  a 371
            |
Sbjct: 6787 a 6787



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 439  cctgttccacaatgatgggatcatc 463
            |||| ||||||||||||||||||||
Sbjct: 9067 cctgctccacaatgatgggatcatc 9091
to top
>dbj|AK069929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036O09, full
            insert sequence
          Length = 1777

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                        
Query: 311  tgcaccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtc 370
            ||||||||| || || ||||| ||||| | |||||| || ||| ||||||||||||||||
Sbjct: 1023 tgcaccatcaatcagctgtaggtcatctttttcttgttcacctgtcttgatcctcatgtc 964

             
Query: 371  a 371
            |
Sbjct: 963  a 963



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 435 gaaccctgttccacaatgatgggatcatc 463
           |||||||| ||||||||||||||||||||
Sbjct: 899 gaaccctgctccacaatgatgggatcatc 871
to top
>dbj|AK066044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048P13, full
           insert sequence
          Length = 1814

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                       
Query: 311 tgcaccatctattagttgtagatcatcctcttcttgctctcctttcttgatcctcatgtc 370
           ||||||||| || || ||||| ||||| | |||||| || ||| ||||||||||||||||
Sbjct: 996 tgcaccatcaatcagctgtaggtcatctttttcttgttcacctgtcttgatcctcatgtc 937

            
Query: 371 a 371
           |
Sbjct: 936 a 936



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 435 gaaccctgttccacaatgatgggatcatc 463
           |||||||| ||||||||||||||||||||
Sbjct: 872 gaaccctgctccacaatgatgggatcatc 844
to top
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0035B18, complete sequence
          Length = 123425

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 347   ctctcctttcttgatcctcatgtcaaactcga 378
             |||||| ||||||||| |||||||||||||||
Sbjct: 29098 ctctccgttcttgatcttcatgtcaaactcga 29067



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 347   ctctcctttcttgatcctcatgtcaaactc 376
             |||||| ||||||||| |||||||||||||
Sbjct: 26591 ctctccattcttgatcttcatgtcaaactc 26562
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                               
Query: 347     ctctcctttcttgatcctcatgtcaaactcga 378
               |||||| ||||||||| |||||||||||||||
Sbjct: 1410303 ctctccgttcttgatcttcatgtcaaactcga 1410272



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 347     ctctcctttcttgatcctcatgtcaaactc 376
               |||||| ||||||||| |||||||||||||
Sbjct: 1407796 ctctccattcttgatcttcatgtcaaactc 1407767
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                               
Query: 347     ctctcctttcttgatcctcatgtcaaactcga 378
               |||||| ||||||||| |||||||||||||||
Sbjct: 1408024 ctctccgttcttgatcttcatgtcaaactcga 1407993



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 347     ctctcctttcttgatcctcatgtcaaactc 376
               |||||| ||||||||| |||||||||||||
Sbjct: 1405517 ctctccattcttgatcttcatgtcaaactc 1405488
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>dbj|AK066342.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068I02, full
           insert sequence
          Length = 1182

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 347 ctctcctttcttgatcctcatgtcaaactc 376
           |||||| ||||||||| |||||||||||||
Sbjct: 693 ctctccattcttgatcttcatgtcaaactc 664
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>emb|AL109843.25|HSDJ763G1 Human DNA sequence from clone RP4-763G1 on chromosome 1p31.2-32.1
             Contains the 5' end of the gene for interleukin-23
             receptor (IL23R), complete sequence
          Length = 114713

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 58    tcacatgtcttcttaagctac 78
             |||||||||||||||||||||
Sbjct: 12108 tcacatgtcttcttaagctac 12128
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>gb|U28941.1| Caenorhabditis elegans cosmid F31D5, complete sequence
          Length = 38868

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   tgcacttttgatatgataac 190
             ||||||||||||||||||||
Sbjct: 19124 tgcacttttgatatgataac 19143
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 505    aaaaacagagtgcctcttgt 524
              ||||||||||||||||||||
Sbjct: 948037 aaaaacagagtgcctcttgt 948018
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>gb|AF490259.2| Chikungunya virus strain Ross, complete genome
          Length = 11791

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 462  tctctgtctcatcacgtcgg 481
            ||||||||||||||||||||
Sbjct: 2357 tctctgtctcatcacgtcgg 2338
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>gb|AY358831.1| Homo sapiens clone DNA142930 MUC13 (UNQ6194) mRNA, complete cds
          Length = 2964

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 338 ctcttcttgctctcctttct 357
           ||||||||||||||||||||
Sbjct: 47  ctcttcttgctctcctttct 66
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>emb|Z22556.1|PPPAS5GN P.pastoris PAS5 gene
          Length = 4001

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 141  aacgaactgagagataaatc 160
            ||||||||||||||||||||
Sbjct: 2481 aacgaactgagagataaatc 2462
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>gb|DQ443544.1| Chikungunya virus strain LR2006_OPY1, complete genome
          Length = 11763

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 462  tctctgtctcatcacgtcgg 481
            ||||||||||||||||||||
Sbjct: 2357 tctctgtctcatcacgtcgg 2338
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>ref|NM_033049.2| Homo sapiens mucin 13, cell surface associated (MUC13), mRNA
          Length = 2961

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 338 ctcttcttgctctcctttct 357
           ||||||||||||||||||||
Sbjct: 47  ctcttcttgctctcctttct 66
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>gb|AC060809.7| Homo sapiens chromosome 15, clone RP11-404B13, complete sequence
          Length = 172123

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 505   aaaaacagagtgcctcttgt 524
             ||||||||||||||||||||
Sbjct: 14886 aaaaacagagtgcctcttgt 14867
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>gb|AC023034.9| Homo sapiens, clone RP11-499F3, complete sequence
          Length = 189732

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 505   aaaaacagagtgcctcttgt 524
             ||||||||||||||||||||
Sbjct: 95194 aaaaacagagtgcctcttgt 95175
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>gb|DP000053.1| Oryctolagus cuniculus target 126 genomic scaffold
          Length = 470930

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     tacagcaatcacatgtcttc 69
              ||||||||||||||||||||
Sbjct: 456528 tacagcaatcacatgtcttc 456509
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>gb|AF286113.1|AF286113 Homo sapiens transmembrane mucin MUC13 (MUC13) mRNA, complete cds
          Length = 2887

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 338 ctcttcttgctctcctttct 357
           ||||||||||||||||||||
Sbjct: 50  ctcttcttgctctcctttct 69
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>gb|AF294917.1|AF294917 Aplysia californica ribosomal protein S6 mRNA, complete cds
          Length = 760

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 342 tcttgctctcctttcttgat 361
           ||||||||||||||||||||
Sbjct: 363 tcttgctctcctttcttgat 344
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>gb|AC026342.34| Homo sapiens 3 BAC RP11-559L12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 109490

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 338   ctcttcttgctctcctttct 357
             ||||||||||||||||||||
Sbjct: 47810 ctcttcttgctctcctttct 47829
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>gb|AF369024.2| Chikungunya virus strain S27-African prototype, complete genome
          Length = 11826

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 462  tctctgtctcatcacgtcgg 481
            ||||||||||||||||||||
Sbjct: 2356 tctctgtctcatcacgtcgg 2337
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>emb|AL672254.9| Mouse DNA sequence from clone RP23-409H23 on chromosome X, complete
             sequence
          Length = 173251

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 420   gtcatctcaataagagaacc 439
             ||||||||||||||||||||
Sbjct: 57909 gtcatctcaataagagaacc 57890
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>dbj|AB035807.1| Homo sapiens DRCC1 mRNA for down-regulated in colon cancer 1,
           complete cds
          Length = 2864

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 338 ctcttcttgctctcctttct 357
           ||||||||||||||||||||
Sbjct: 47  ctcttcttgctctcctttct 66


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,976,602
Number of Sequences: 3902068
Number of extensions: 4976602
Number of successful extensions: 86139
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85708
Number of HSP's gapped (non-prelim): 427
length of query: 642
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 619
effective length of database: 17,143,297,704
effective search space: 10611701278776
effective search space used: 10611701278776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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