Clone Information

BLAST Search Result

Clone Name	rbags27j14
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS24_ARATH (Q9SS17) 40S ribosomal protein S24	213	5e-55
2	RS24_PONPY (Q5RAQ8) 40S ribosomal protein S24	156	5e-38
3	RS24_BOVIN (Q56JU9) 40S ribosomal protein S24	156	5e-38
4	RS24_RAT (P62850) 40S ribosomal protein S24	156	5e-38
5	RS24_MOUSE (P62849) 40S ribosomal protein S24	156	5e-38
6	RS24_MESAU (P62848) 40S ribosomal protein S24 (Ribosomal protein...	156	5e-38
7	RS24_HUMAN (P62847) 40S ribosomal protein S24	156	5e-38
8	RS24_XENLA (P02377) 40S ribosomal protein S24 (S19)	155	1e-37
9	RS24_MACFA (Q4R5H5) 40S ribosomal protein S24	154	1e-37
10	RS24_SPOFR (Q962Q6) 40S ribosomal protein S24	154	2e-37
11	RS24_RHIRA (P14249) 40S ribosomal protein S24	154	3e-37
12	RS24_ICTPU (Q90YQ0) 40S ribosomal protein S24	152	6e-37
13	RS24_FUGRU (O42387) 40S ribosomal protein S24	149	6e-36
14	RS24_YEAST (P26782) 40S ribosomal protein S24 (RP50)	145	1e-34
15	RS24B_SCHPO (O59865) 40S ribosomal protein S24-B	143	3e-34
16	RS24_ORYLA (Q9W6X9) 40S ribosomal protein S24	142	8e-34
17	RS24A_SCHPO (O13784) 40S ribosomal protein S24-A	139	5e-33
18	RS24_PYRFU (Q8U442) 30S ribosomal protein S24e	62	2e-09
19	RS24_PYRKO (Q5JIY8) 30S ribosomal protein S24e	61	3e-09
20	RS24_PYRHO (P58746) 30S ribosomal protein S24e	58	2e-08
21	RS24_PYRAE (Q8ZV65) 30S ribosomal protein S24e	57	5e-08
22	RS24_PYRAB (Q9UY20) 30S ribosomal protein S24e	57	5e-08
23	RS24_NANEQ (Q74M50) 30S ribosomal protein S24e	49	1e-05
24	RS24_AERPE (Q9YCY0) 30S ribosomal protein S24e	45	2e-04
25	RS24_SULTO (Q975Q9) 30S ribosomal protein S24e	43	6e-04
26	RS24_PICTO (Q6L0P8) 30S ribosomal protein S24e	43	6e-04
27	RS24_METTH (O26367) 30S ribosomal protein S24e	43	8e-04
28	RS24_SULSO (Q97ZY6) 30S ribosomal protein S24e	41	0.002
29	RS24_THEAC (Q9HJ79) 30S ribosomal protein S24e	41	0.003
30	RS24_METKA (Q8TVD8) 30S ribosomal protein S24e	40	0.004
31	RS24_SULAC (Q4JAF9) 30S ribosomal protein S24e	40	0.007
32	RS24_THEVO (Q97BH3) 30S ribosomal protein S24e	39	0.009
33	RS24_ARCFU (O29151) 30S ribosomal protein S24e	34	0.29
34	SNF5_YEAST (P18480) Transcription regulatory protein SNF5 (SWI/S...	34	0.38
35	TRHY_HUMAN (Q07283) Trichohyalin	33	0.50
36	GLCAP_SOYBN (P11827) Beta-conglycinin, alpha' chain precursor	32	1.4
37	RECX_DEIRA (Q9RUS2) Regulatory protein recX	32	1.9
38	ACRBP_HUMAN (Q8NEB7) Acrosin-binding protein precursor (Proacros...	31	2.5
39	FKBP3_CANGA (Q6FKH7) FK506-binding protein 3 (EC 5.2.1.8) (Pepti...	31	3.2
40	ZO1_MOUSE (P39447) Tight junction protein ZO-1 (Zonula occludens...	30	4.2
41	ZO1_HUMAN (Q07157) Tight junction protein ZO-1 (Zonula occludens...	30	4.2
42	ZO1_CANFA (O97758) Tight junction protein ZO-1 (Zonula occludens...	30	4.2
43	HEM3_GEOKA (Q5KWK6) Porphobilinogen deaminase (EC 2.5.1.61) (PBG...	30	4.2
44	B3A3_RABIT (O18917) Anion exchange protein 3 (Neuronal band 3-li...	30	5.5
45	CXA10_HUMAN (P57773) Gap junction alpha-10 protein (Connexin-59)...	30	5.5
46	KI21B_HUMAN (O75037) Kinesin family member 21B	30	5.5
47	TRHY_RABIT (P37709) Trichohyalin	30	5.5
48	DHH1_CRYNE (Q5KJI2) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)	30	7.2
49	CWC21_USTMA (Q4P0G6) Pre-mRNA-splicing factor CWC21	30	7.2
50	PQQE_METCA (Q608P0) Coenzyme PQQ synthesis protein E (Pyrroloqui...	30	7.2
51	KI21B_MOUSE (Q9QXL1) Kinesin family member 21B (Kinesin-like pro...	29	9.4
52	LIPB_YEAST (Q06005) Lipoate-protein ligase, mitochondrial precur...	29	9.4
53	VSWB_TRYBR (P20947) Variant surface glycoprotein WRATAT B precur...	29	9.4
54	PMM_CAEEL (Q9XUE6) Probable phosphomannomutase (EC 5.4.2.8) (PMM)	29	9.4
55	CR030_HUMAN (Q8N787) Protein C18orf30	29	9.4

>RS24_ARATH (Q9SS17) 40S ribosomal protein S24|
          Length = 133

 Score =  213 bits (541), Expect = 5e-55
 Identities = 102/121 (84%), Positives = 115/121 (95%)
 Frame = -3

Query: 604 ATTAVTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFK 425
           A  AVT+RTRKFMTNRLL+RKQFV++V+HPGRANVSKAELK++L+++YEVKDPN IFVFK
Sbjct: 2   AEKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFK 61

Query: 424 FRTHFGGGKSSGFGLIYDNLEAAKKFEPKYRLIRNGLATKVEKSRKQIKERKNRTKKIRG 245
           FRTHFGGGKSSGFGLIYD +E+AKKFEPKYRLIRNGL TK+EKSRKQIKERKNR KKIRG
Sbjct: 62  FRTHFGGGKSSGFGLIYDTVESAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIRG 121

Query: 244 V 242
           V
Sbjct: 122 V 122

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>RS24_PONPY (Q5RAQ8) 40S ribosomal protein S24|
          Length = 131

 Score =  156 bits (394), Expect = 5e-38
 Identities = 75/116 (64%), Positives = 97/116 (83%)
 Frame = -3

Query: 592 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 413
           VT+RTRKFMTNRLL RKQ V++V+HPG+A V K E++++L+K+Y+   P+ IFVF FRTH
Sbjct: 5   VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63

Query: 412 FGGGKSSGFGLIYDNLEAAKKFEPKYRLIRNGLATKVEKSRKQIKERKNRTKKIRG 245
           FGGGK++GFG+IYD+L+ AKK EPK+RL R+GL  K + SRKQ KERKNR KK+RG
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119

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>RS24_BOVIN (Q56JU9) 40S ribosomal protein S24|
          Length = 131

 Score =  156 bits (394), Expect = 5e-38
 Identities = 75/116 (64%), Positives = 97/116 (83%)
 Frame = -3

Query: 592 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 413
           VT+RTRKFMTNRLL RKQ V++V+HPG+A V K E++++L+K+Y+   P+ IFVF FRTH
Sbjct: 5   VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63

Query: 412 FGGGKSSGFGLIYDNLEAAKKFEPKYRLIRNGLATKVEKSRKQIKERKNRTKKIRG 245
           FGGGK++GFG+IYD+L+ AKK EPK+RL R+GL  K + SRKQ KERKNR KK+RG
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119

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>RS24_RAT (P62850) 40S ribosomal protein S24|
          Length = 133

 Score =  156 bits (394), Expect = 5e-38
 Identities = 75/116 (64%), Positives = 97/116 (83%)
 Frame = -3

Query: 592 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 413
           VT+RTRKFMTNRLL RKQ V++V+HPG+A V K E++++L+K+Y+   P+ IFVF FRTH
Sbjct: 5   VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63

Query: 412 FGGGKSSGFGLIYDNLEAAKKFEPKYRLIRNGLATKVEKSRKQIKERKNRTKKIRG 245
           FGGGK++GFG+IYD+L+ AKK EPK+RL R+GL  K + SRKQ KERKNR KK+RG
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119

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>RS24_MOUSE (P62849) 40S ribosomal protein S24|
          Length = 133

 Score =  156 bits (394), Expect = 5e-38
 Identities = 75/116 (64%), Positives = 97/116 (83%)
 Frame = -3

Query: 592 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 413
           VT+RTRKFMTNRLL RKQ V++V+HPG+A V K E++++L+K+Y+   P+ IFVF FRTH
Sbjct: 5   VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63

Query: 412 FGGGKSSGFGLIYDNLEAAKKFEPKYRLIRNGLATKVEKSRKQIKERKNRTKKIRG 245
           FGGGK++GFG+IYD+L+ AKK EPK+RL R+GL  K + SRKQ KERKNR KK+RG
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119

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>RS24_MESAU (P62848) 40S ribosomal protein S24 (Ribosomal protein S19)|
          Length = 133

 Score =  156 bits (394), Expect = 5e-38
 Identities = 75/116 (64%), Positives = 97/116 (83%)
 Frame = -3

Query: 592 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 413
           VT+RTRKFMTNRLL RKQ V++V+HPG+A V K E++++L+K+Y+   P+ IFVF FRTH
Sbjct: 5   VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63

Query: 412 FGGGKSSGFGLIYDNLEAAKKFEPKYRLIRNGLATKVEKSRKQIKERKNRTKKIRG 245
           FGGGK++GFG+IYD+L+ AKK EPK+RL R+GL  K + SRKQ KERKNR KK+RG
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119

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>RS24_HUMAN (P62847) 40S ribosomal protein S24|
          Length = 133

 Score =  156 bits (394), Expect = 5e-38
 Identities = 75/116 (64%), Positives = 97/116 (83%)
 Frame = -3

Query: 592 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 413
           VT+RTRKFMTNRLL RKQ V++V+HPG+A V K E++++L+K+Y+   P+ IFVF FRTH
Sbjct: 5   VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63

Query: 412 FGGGKSSGFGLIYDNLEAAKKFEPKYRLIRNGLATKVEKSRKQIKERKNRTKKIRG 245
           FGGGK++GFG+IYD+L+ AKK EPK+RL R+GL  K + SRKQ KERKNR KK+RG
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119

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>RS24_XENLA (P02377) 40S ribosomal protein S24 (S19)|
          Length = 132

 Score =  155 bits (391), Expect = 1e-37
 Identities = 74/116 (63%), Positives = 97/116 (83%)
 Frame = -3

Query: 592 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 413
           VT+RTRKFMTNRLL RKQ V++V+HPG+A V K E++++L+K+Y+   P+ IFVF FRTH
Sbjct: 5   VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63

Query: 412 FGGGKSSGFGLIYDNLEAAKKFEPKYRLIRNGLATKVEKSRKQIKERKNRTKKIRG 245
           FGGGK++GFG+IYD+L+ AKK EPK+RL ++GL  K + SRKQ KERKNR KK+RG
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLAKHGLYEKKKTSRKQRKERKNRMKKVRG 119

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>RS24_MACFA (Q4R5H5) 40S ribosomal protein S24|
          Length = 131

 Score =  154 bits (390), Expect = 1e-37
 Identities = 75/116 (64%), Positives = 96/116 (82%)
 Frame = -3

Query: 592 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 413
           VT+RTRKFMTNRLL RKQ V+ V+HPG+A V K E++++L+K+Y+   P+ IFVF FRTH
Sbjct: 5   VTIRTRKFMTNRLLQRKQMVIGVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63

Query: 412 FGGGKSSGFGLIYDNLEAAKKFEPKYRLIRNGLATKVEKSRKQIKERKNRTKKIRG 245
           FGGGK++GFG+IYD+L+ AKK EPK+RL R+GL  K + SRKQ KERKNR KK+RG
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119

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>RS24_SPOFR (Q962Q6) 40S ribosomal protein S24|
          Length = 132

 Score =  154 bits (389), Expect = 2e-37
 Identities = 74/115 (64%), Positives = 95/115 (82%)
 Frame = -3

Query: 589 TLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHF 410
           T+RTRKFMTNRLLARKQ V +V+HPG+  VSK E++++L+K+Y+V  P+ +FVF F+T+F
Sbjct: 7   TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVT-PDVVFVFGFKTNF 65

Query: 409 GGGKSSGFGLIYDNLEAAKKFEPKYRLIRNGLATKVEKSRKQIKERKNRTKKIRG 245
           GGGKS+GF LIYD L+ AKKFEPK+RL R+GL  K   +RKQ KERKNR KK+RG
Sbjct: 66  GGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 120

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>RS24_RHIRA (P14249) 40S ribosomal protein S24|
          Length = 148

 Score =  154 bits (388), Expect = 3e-37
 Identities = 76/122 (62%), Positives = 95/122 (77%)
 Frame = -3

Query: 607 KATTAVTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVF 428
           +A  AVT+RTRKF+TNRLL RKQ V++VIHPG ANVSK EL+ ++ K+Y+  D   + VF
Sbjct: 19  RADAAVTIRTRKFLTNRLLQRKQMVVDVIHPGLANVSKDELRSKIGKMYKA-DKEVVSVF 77

Query: 427 KFRTHFGGGKSSGFGLIYDNLEAAKKFEPKYRLIRNGLATKVEKSRKQIKERKNRTKKIR 248
            F+THFGGGK++GF LIYDN+EA K FEPK+RL+R GLA   +  RKQ KE+KNR KK R
Sbjct: 78  GFKTHFGGGKTTGFALIYDNVEALKNFEPKHRLVRIGLAEAPKGGRKQRKEKKNREKKFR 137

Query: 247 GV 242
           GV
Sbjct: 138 GV 139

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>RS24_ICTPU (Q90YQ0) 40S ribosomal protein S24|
          Length = 131

 Score =  152 bits (385), Expect = 6e-37
 Identities = 73/117 (62%), Positives = 96/117 (82%)
 Frame = -3

Query: 595 AVTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRT 416
           +VTLRTRKFMTNRLL RKQ VL+V+HPG+A V K E++++L+K+Y+   P+ +FVF F+T
Sbjct: 4   SVTLRTRKFMTNRLLQRKQMVLDVLHPGKATVPKTEIREKLAKMYKTT-PDVVFVFGFKT 62

Query: 415 HFGGGKSSGFGLIYDNLEAAKKFEPKYRLIRNGLATKVEKSRKQIKERKNRTKKIRG 245
            FGGGK++GF ++YD+L+ AKK EPKYRL R+GL  K + SRKQ KERKNR KK+RG
Sbjct: 63  QFGGGKTTGFAMVYDSLDYAKKNEPKYRLARHGLYEKKKTSRKQRKERKNRMKKVRG 119

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>RS24_FUGRU (O42387) 40S ribosomal protein S24|
          Length = 132

 Score =  149 bits (376), Expect = 6e-36
 Identities = 71/116 (61%), Positives = 95/116 (81%)
 Frame = -3

Query: 592 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 413
           VT+RTRKFMTNRLL RKQ V++V+HPG+A V K E++++L+K+Y+   P+ +FVF FRT 
Sbjct: 5   VTVRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKTT-PDVVFVFGFRTQ 63

Query: 412 FGGGKSSGFGLIYDNLEAAKKFEPKYRLIRNGLATKVEKSRKQIKERKNRTKKIRG 245
           FGGGK++GF ++YD+L+ AKK EPK+RL R+GL  K + SRKQ KERKNR KK+RG
Sbjct: 64  FGGGKTTGFAMVYDSLDYAKKNEPKHRLARHGLFEKKKTSRKQRKERKNRMKKVRG 119

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>RS24_YEAST (P26782) 40S ribosomal protein S24 (RP50)|
          Length = 134

 Score =  145 bits (365), Expect = 1e-34
 Identities = 74/118 (62%), Positives = 97/118 (82%), Gaps = 1/118 (0%)
 Frame = -3

Query: 595 AVTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRT 416
           AVT+RTRK ++N LLARKQFV++V+HP RANVSK EL+++L++VY+  + + + VF FRT
Sbjct: 3   AVTIRTRKVISNPLLARKQFVVDVLHPNRANVSKDELREKLAEVYKA-EKDAVSVFGFRT 61

Query: 415 HFGGGKSSGFGLIYDNLEAAKKFEPKYRLIRNGLATKVEK-SRKQIKERKNRTKKIRG 245
            FGGGKS GFGL+Y+++  AKKFEP YRL+R GLA KVEK SR+Q K++KNR KKI G
Sbjct: 62  QFGGGKSVGFGLVYNSVAEAKKFEPTYRLVRYGLAEKVEKASRQQRKQKKNRDKKIFG 119

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>RS24B_SCHPO (O59865) 40S ribosomal protein S24-B|
          Length = 133

 Score =  143 bits (361), Expect = 3e-34
 Identities = 68/118 (57%), Positives = 95/118 (80%), Gaps = 1/118 (0%)
 Frame = -3

Query: 595 AVTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRT 416
           AVT+RTRKFMTNRLL RKQ V++++HPG+AN+SK E++++L+++Y+  D  C+  F  RT
Sbjct: 3   AVTIRTRKFMTNRLLQRKQMVVDILHPGKANLSKNEIREKLAQMYKT-DSECVQAFGLRT 61

Query: 415 HFGGGKSSGFGLIYDNLEAAKKFEPKYRLIRNGLATKVEK-SRKQIKERKNRTKKIRG 245
           HFGGG+S+GF LIYD+ E+ KKFEP YRL+R G A  ++K +R+Q K+RKNR KK+ G
Sbjct: 62  HFGGGRSTGFALIYDSTESMKKFEPHYRLVRVGQAEPIQKVARQQRKQRKNRGKKVFG 119

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>RS24_ORYLA (Q9W6X9) 40S ribosomal protein S24|
          Length = 132

 Score =  142 bits (358), Expect = 8e-34
 Identities = 67/117 (57%), Positives = 93/117 (79%)
 Frame = -3

Query: 592 VTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTH 413
           VT+RTRKFMTNRLL RKQ V++V+HPG+A V K E++++L+K+Y+   P+ +FVF FRT 
Sbjct: 5   VTIRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKTT-PDVVFVFGFRTQ 63

Query: 412 FGGGKSSGFGLIYDNLEAAKKFEPKYRLIRNGLATKVEKSRKQIKERKNRTKKIRGV 242
           FGGGK++GF ++YD+L+ AKK EPK+RL  +GL  K + SRKQ  ER+NR KK+R +
Sbjct: 64  FGGGKTTGFAMVYDSLDYAKKNEPKHRLATHGLYEKKKTSRKQRTERQNRMKKVRSI 120

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>RS24A_SCHPO (O13784) 40S ribosomal protein S24-A|
          Length = 133

 Score =  139 bits (351), Expect = 5e-33
 Identities = 66/118 (55%), Positives = 95/118 (80%), Gaps = 1/118 (0%)
 Frame = -3

Query: 595 AVTLRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRT 416
           AVT+RTRKFMTNRLL RKQ V++++HPG+AN+SK +L+++L ++Y+  D + +  F  RT
Sbjct: 3   AVTIRTRKFMTNRLLQRKQMVVDILHPGKANISKNDLREKLGQMYKT-DASAVQAFGLRT 61

Query: 415 HFGGGKSSGFGLIYDNLEAAKKFEPKYRLIRNGLATKVEK-SRKQIKERKNRTKKIRG 245
           H+GGG+++GF LIYD++EA KKFEP YRL+R G A  ++K +R+Q K+RKNR KK+ G
Sbjct: 62  HYGGGRTTGFALIYDDVEAMKKFEPHYRLVRVGHAEPIQKVARQQRKQRKNRGKKVFG 119

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>RS24_PYRFU (Q8U442) 30S ribosomal protein S24e|
          Length = 99

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 31/96 (32%), Positives = 53/96 (55%)
 Frame = -3

Query: 586 LRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFG 407
           +R ++   N+L+ RK+   E+ HPG    S+ ++K +L  + ++ +P    +   R++FG
Sbjct: 3   IRIKEIKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDL-NPETTVIQYIRSYFG 61

Query: 406 GGKSSGFGLIYDNLEAAKKFEPKYRLIRNGLATKVE 299
              S G+   YD+ E     EP+Y LIR+GL  K E
Sbjct: 62  SYISKGYAKAYDSKERMLYIEPEYILIRDGLIEKKE 97

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>RS24_PYRKO (Q5JIY8) 30S ribosomal protein S24e|
          Length = 98

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 30/97 (30%), Positives = 52/97 (53%)
 Frame = -3

Query: 586 LRTRKFMTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFG 407
           ++  +   N+LL RK+   +V+H G    S+  +K +L  + ++ DPN   +   R++FG
Sbjct: 3   IKVTEIRENKLLGRKEIYFDVLHEGEPTPSREAVKGKLVAMLDL-DPNTTVIQYIRSYFG 61

Query: 406 GGKSSGFGLIYDNLEAAKKFEPKYRLIRNGLATKVEK 296
              S G+   Y+  E     EP+Y L+R+GL  K E+
Sbjct: 62  SNVSKGYAKAYETRERMLYIEPEYILVRDGLVQKQEE 98

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>RS24_PYRHO (P58746) 30S ribosomal protein S24e|
          Length = 99

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 29/88 (32%), Positives = 49/88 (55%)
 Frame = -3

Query: 562 NRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFGGGKSSGFG 383
           N+L+ RK+   E+ HPG    S+ ++K +L  + ++ +P    +   R++FG  KS G+ 
Sbjct: 11  NKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDL-NPETTVIQYIRSYFGSYKSKGYA 69

Query: 382 LIYDNLEAAKKFEPKYRLIRNGLATKVE 299
             Y + E     EP+Y LIR+G+  K E
Sbjct: 70  KYYYDKERMLYIEPEYILIRDGIIEKKE 97

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>RS24_PYRAE (Q8ZV65) 30S ribosomal protein S24e|
          Length = 121

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 32/109 (29%), Positives = 61/109 (55%), Gaps = 6/109 (5%)
 Frame = -3

Query: 562 NRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFGGGKSSGFG 383
           N+LLAR++ ++E +H   +  ++  +++ ++K   +   N +FV + +T FG G+S    
Sbjct: 14  NKLLARRELLVEAVHQNASTPTRQSVREWVAKQLGIDISN-VFVRRIKTEFGRGRSLAEV 72

Query: 382 LIYDNLEAAKKFEPKYRLIRN------GLATKVEKSRKQIKERKNRTKK 254
            +Y++ + A+  EP Y L RN       L  + +K R + +E+K R KK
Sbjct: 73  HVYNDSKIARVIEPLYILARNLGEEGKKLLEEAKKRRNERREKKKRKKK 121

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>RS24_PYRAB (Q9UY20) 30S ribosomal protein S24e|
          Length = 99

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 28/88 (31%), Positives = 49/88 (55%)
 Frame = -3

Query: 562 NRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFGGGKSSGFG 383
           N+L+ RK+   E+ HPG    S+ ++K +L  + ++ +P    +   R++FG  KS G+ 
Sbjct: 11  NKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDL-NPETTVIQYIRSYFGSYKSKGYA 69

Query: 382 LIYDNLEAAKKFEPKYRLIRNGLATKVE 299
             Y + +     EP+Y LIR+G+  K E
Sbjct: 70  KYYYDKDRMLYIEPEYILIRDGIIEKKE 97

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>RS24_NANEQ (Q74M50) 30S ribosomal protein S24e|
          Length = 94

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 25/83 (30%), Positives = 48/83 (57%)
 Frame = -3

Query: 562 NRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFGGGKSSGFG 383
           N+L  R +++++V HP     ++ E K++++++  V D N + + K  + +G   S  + 
Sbjct: 12  NKLFDRTEYIIQVEHPKEKTPTREEAKEKIAEMLNV-DKNKLVIKKIVSKYGLPYSFIYA 70

Query: 382 LIYDNLEAAKKFEPKYRLIRNGL 314
            +YDN++ AK+ E K  L RN L
Sbjct: 71  RVYDNIDTAKRVELKQILRRNNL 93

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>RS24_AERPE (Q9YCY0) 30S ribosomal protein S24e|
          Length = 102

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 48/90 (53%)
 Frame = -3

Query: 562 NRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFGGGKSSGFG 383
           N L+ R++ V+ + H  +    +  L+ +L++V  V D   I++   +T +G G S    
Sbjct: 12  NPLVKRREIVMILHHELKPTPMRIMLRQKLAEVLGV-DIKRIYIRYIKTGYGAGLSKVRV 70

Query: 382 LIYDNLEAAKKFEPKYRLIRNGLATKVEKS 293
            +YD+ E A  FEPKY + RNG     E++
Sbjct: 71  HVYDSPERALSFEPKYIIERNGGVNPFEEA 100

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>RS24_SULTO (Q975Q9) 30S ribosomal protein S24e|
          Length = 120

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 24/92 (26%), Positives = 49/92 (53%)
 Frame = -3

Query: 562 NRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFGGGKSSGFG 383
           N ++ R++  ++V H G   +S+ ++   ++  Y  ++ + + + K  T +G G S    
Sbjct: 25  NNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQE-DLVVIKKIHTLYGAGISYVRA 83

Query: 382 LIYDNLEAAKKFEPKYRLIRNGLATKVEKSRK 287
            IY++ +  ++FEP+Y LI      KV+K  K
Sbjct: 84  NIYNDKKTLQEFEPQY-LIGRDTGQKVKKGGK 114

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>RS24_PICTO (Q6L0P8) 30S ribosomal protein S24e|
          Length = 102

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 28/86 (32%), Positives = 40/86 (46%)
 Frame = -3

Query: 562 NRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFGGGKSSGFG 383
           N+LL RK+    +        S+ +++  L+  Y   D + I V K R   G  +  G+ 
Sbjct: 14  NKLLFRKEINYTIKFENDKTPSREDIRKLLANNYG-SDESLIIVDKNRQETGKHEIKGYA 72

Query: 382 LIYDNLEAAKKFEPKYRLIRNGLATK 305
            IYD  E A  +EP Y L RN L  K
Sbjct: 73  KIYDTKEHAMLYEPDYELFRNKLKVK 98

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>RS24_METTH (O26367) 30S ribosomal protein S24e|
          Length = 100

 Score = 42.7 bits (99), Expect = 8e-04
 Identities = 24/89 (26%), Positives = 49/89 (55%)
 Frame = -3

Query: 562 NRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFGGGKSSGFG 383
           N LL RK+   E ++ G +     E+K++L  + +  D + + V K    FG  +++G+ 
Sbjct: 11  NPLLNRKEIRFECLYEGESTPKVLEVKNKLVAMLDA-DKDLLVVDKIDQGFGEPRATGYA 69

Query: 382 LIYDNLEAAKKFEPKYRLIRNGLATKVEK 296
            IY++ E   + EP++ + +N  A++ E+
Sbjct: 70  KIYESAEKLTEIEPEHVIKKNTEASEEEE 98

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>RS24_SULSO (Q97ZY6) 30S ribosomal protein S24e|
          Length = 120

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 28/91 (30%), Positives = 47/91 (51%)
 Frame = -3

Query: 568 MTNRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFGGGKSSG 389
           M N ++ R++  L+V H G    S+ ++   + +    ++ N + V K  T +G G S+ 
Sbjct: 21  MQNSVIGRREISLKVYHMGSGTPSRKDIIKAIIQALGSQE-NLVVVRKISTSYGAGISNV 79

Query: 388 FGLIYDNLEAAKKFEPKYRLIRNGLATKVEK 296
              IY + E  +K EPKY L R+   TK +K
Sbjct: 80  KLHIYKSREILEKVEPKYLLDRDA-GTKQKK 109

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>RS24_THEAC (Q9HJ79) 30S ribosomal protein S24e|
          Length = 98

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 27/89 (30%), Positives = 43/89 (48%)
 Frame = -3

Query: 562 NRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFGGGKSSGFG 383
           N +L RK+    +        S+ E+K+ ++K +E  D   + V   +   G  +  G+ 
Sbjct: 11  NPILKRKEIKYVLKFDSSRTPSREEIKELIAK-HEGVDKELVIVDNNKQLTGKHEIEGYT 69

Query: 382 LIYDNLEAAKKFEPKYRLIRNGLATKVEK 296
            IY +  +A  +EP Y LIRNGL  K  K
Sbjct: 70  KIYADKPSAMLYEPDYELIRNGLKQKEAK 98

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>RS24_METKA (Q8TVD8) 30S ribosomal protein S24e|
          Length = 116

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 24/103 (23%), Positives = 52/103 (50%)
 Frame = -3

Query: 562 NRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFGGGKSSGFG 383
           N LL RK+    V H       K+E+  +L+ + +V D   + + +  + FG  ++ G+ 
Sbjct: 11  NPLLYRKEVKFVVRHEDSGTPQKSEVLRKLAAILDV-DKEVVLIDRMESEFGKRETKGYA 69

Query: 382 LIYDNLEAAKKFEPKYRLIRNGLATKVEKSRKQIKERKNRTKK 254
            IY ++E  +  EP++          VE+ +K ++E ++ +++
Sbjct: 70  KIYKSMEHLEDIEPEH---------MVERHKKVLEELESESEE 103

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>RS24_SULAC (Q4JAF9) 30S ribosomal protein S24e|
          Length = 118

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 23/98 (23%), Positives = 50/98 (51%)
 Frame = -3

Query: 562 NRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFGGGKSSGFG 383
           N +  R++  +++ H G    S+ EL   ++  +   + + + V K  T++G G S    
Sbjct: 23  NNVANRRELYIKLFHIGSGTPSRKELVKAIASTFSTAE-DLVVVKKVFTNYGSGISYARV 81

Query: 382 LIYDNLEAAKKFEPKYRLIRNGLATKVEKSRKQIKERK 269
            +Y + ++ +K EP+Y LI      K++K  K  ++++
Sbjct: 82  NVYKDKDSLQKLEPQY-LIGRDTGQKIKKGGKSAQKQQ 118

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>RS24_THEVO (Q97BH3) 30S ribosomal protein S24e|
          Length = 99

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 27/89 (30%), Positives = 42/89 (47%)
 Frame = -3

Query: 562 NRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFGGGKSSGFG 383
           N +L RK+    +        S+ E+K+ ++K +E      I V   +   G  +  G+ 
Sbjct: 12  NPILKRKELKYTLKFENARTPSREEIKEIIAK-HEGAQKELIIVESNKQLTGKHEIVGYT 70

Query: 382 LIYDNLEAAKKFEPKYRLIRNGLATKVEK 296
            IY +  +A  +EP Y LIRNGL  K  K
Sbjct: 71  KIYQDKASAMLYEPDYELIRNGLKQKEAK 99

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>RS24_ARCFU (O29151) 30S ribosomal protein S24e|
          Length = 110

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 24/96 (25%), Positives = 50/96 (52%)
 Frame = -3

Query: 562 NRLLARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFGGGKSSGFG 383
           N LL R++    +   G+   S+ E++ +++ +    +P  + V   +T FG  ++  + 
Sbjct: 14  NPLLRRREVYCRLSFEGKTP-SRKEVRGKIAGLMNA-EPERVVVDYIKTEFGKTEAKCYV 71

Query: 382 LIYDNLEAAKKFEPKYRLIRNGLATKVEKSRKQIKE 275
            IYD +E  +K E ++ + RN    KVE+  ++ +E
Sbjct: 72  KIYDTVEDLQKIEEEHIIERN----KVEEQAEEAEE 103

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>SNF5_YEAST (P18480) Transcription regulatory protein SNF5 (SWI/SNF complex|
           component SNF5) (Transcription factor TYE4)
          Length = 905

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 16/74 (21%), Positives = 42/74 (56%)
 Frame = -2

Query: 428 QVPHPLRRRQVLRIRSHLRQPRSRQEVRAQVPPHQERSCYQGREVTQADQGKEEQNKEDP 249
           Q+ + ++R+Q  + R H++  + +Q+ + Q   HQ++   Q ++  Q  Q +++Q ++  
Sbjct: 198 QLRNQIQRQQQQQFRHHVQIQQQQQKQQQQQQQHQQQQQQQQQQQQQQQQQQQQQQQQQQ 257

Query: 248 WCEEDQGRRCQEEI 207
             ++ Q ++ Q +I
Sbjct: 258 QQQQQQQQQQQGQI 271

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>TRHY_HUMAN (Q07283) Trichohyalin|
          Length = 1898

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 25/75 (33%), Positives = 36/75 (48%)
 Frame = -2

Query: 434 RLQVPHPLRRRQVLRIRSHLRQPRSRQEVRAQVPPHQERSCYQGREVTQADQGKEEQNKE 255
           RL+    LRR+Q    R    + R +QE R Q    +E+   + +E  +  Q + EQ +E
Sbjct: 299 RLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEERREQQLRREQEEE 358

Query: 254 DPWCEEDQGRRCQEE 210
                E Q RR QEE
Sbjct: 359 R---REQQLRREQEE 370



 Score = 29.6 bits (65), Expect = 7.2
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 10/85 (11%)
 Frame = -2

Query: 434  RLQVPHPLRRRQVLRIRSHLRQPRSR----------QEVRAQVPPHQERSCYQGREVTQA 285
            RL    PLR ++  ++R+  RQ R +          Q  R +    +E    +  E  Q 
Sbjct: 801  RLSARPPLREQRERQLRAEERQQREQRFLPEEEEKEQRGRQRREREKELQFLEEEEQLQR 860

Query: 284  DQGKEEQNKEDPWCEEDQGRRCQEE 210
             +  ++  +E+   +EDQ RR QE+
Sbjct: 861  RERAQQLQEEEDGLQEDQERRRQEQ 885

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>GLCAP_SOYBN (P11827) Beta-conglycinin, alpha' chain precursor|
          Length = 639

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
 Frame = -2

Query: 386 RSHLR--QPRSRQEVRAQVPPHQERSCYQGREVTQADQGKEEQNKEDPWCEEDQGRRCQE 213
           R H R  QP  ++E + +    QE+  +QG+E  + ++ ++E  ++D   +E +G   Q 
Sbjct: 144 REHPRPHQPHQKEEEKHEWQHKQEK--HQGKESEEEEEDQDEDEEQDKESQESEGSESQR 201

Query: 212 E 210
           E
Sbjct: 202 E 202

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>RECX_DEIRA (Q9RUS2) Regulatory protein recX|
          Length = 204

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = -2

Query: 374 RQPRSRQEVRAQVPPHQERSCYQGREVTQAD-QGKEEQNKEDPWCEEDQGRRCQE 213
           R+P++R+E R  +  +  R+    R +T+A+ +GK E+  EDP   E+  RR QE
Sbjct: 44  RRPKTREEQREALLAYAFRAL-GARAITEAELRGKLERRSEDPELVEEVLRRVQE 97

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>ACRBP_HUMAN (Q8NEB7) Acrosin-binding protein precursor (Proacrosin-binding|
           protein sp32) (Cancer testis antigen OY-TES-1)
          Length = 543

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 15/66 (22%), Positives = 31/66 (46%)
 Frame = -2

Query: 365 RSRQEVRAQVPPHQERSCYQGREVTQADQGKEEQNKEDPWCEEDQGRRCQEEISTFLSSS 186
           +  Q V  +  P QE    +G++  + ++ +EE+ K++      +GR    ++ T     
Sbjct: 196 KQEQGVEHRQEPTQEHKQEEGQKQEEQEEEQEEEGKQEEGQGTKEGREAVSQLQTDSEPK 255

Query: 185 FHHQPL 168
           FH + L
Sbjct: 256 FHSESL 261

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>FKBP3_CANGA (Q6FKH7) FK506-binding protein 3 (EC 5.2.1.8) (Peptidyl-prolyl|
           cis-trans isomerase) (PPIase) (Rotamase)
          Length = 437

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 21/98 (21%), Positives = 42/98 (42%)
 Frame = -2

Query: 356 QEVRAQVPPHQERSCYQGREVTQADQGKEEQNKEDPWCEEDQGRRCQEEISTFLSSSFHH 177
           +E   +  P ++    +G++  +++  +EE+  +    EED     +E +   LS    +
Sbjct: 88  EEEEEEEKPAKKSKKSKGKKKDESEDEEEEEESDSDLDEEDDDDEFEEYVLATLSPKTQY 147

Query: 176 QPLLGLAPYPCANVAECLIMTRKDFAIYVISWYVKRHF 63
           Q  L L   P     E   +    +AI ++  Y+K  F
Sbjct: 148 QQTLDLTIAP---EEEIQFIVTGSYAISLVGNYIKHPF 182

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>ZO1_MOUSE (P39447) Tight junction protein ZO-1 (Zonula occludens 1 protein)|
           (Zona occludens 1 protein) (Tight junction protein 1)
          Length = 1745

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
 Frame = -3

Query: 430 FKFRTHFGGGKSSGFGLIYDNLEAAKKFEPKYR-LIRNGLATKVEKSRKQIKE----RKN 266
           F  RTHF   K S +GL ++  E  +  +  Y   + + LA ++ K+ K+++      KN
Sbjct: 519 FYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKN 578

Query: 265 RTKKIRGV 242
           R +++  V
Sbjct: 579 RAEQLASV 586

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>ZO1_HUMAN (Q07157) Tight junction protein ZO-1 (Zonula occludens 1 protein)|
           (Zona occludens 1 protein) (Tight junction protein 1)
          Length = 1748

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
 Frame = -3

Query: 430 FKFRTHFGGGKSSGFGLIYDNLEAAKKFEPKYR-LIRNGLATKVEKSRKQIKE----RKN 266
           F  RTHF   K S +GL ++  E  +  +  Y   + + LA ++ K+ K+++      KN
Sbjct: 519 FYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKN 578

Query: 265 RTKKIRGV 242
           R +++  V
Sbjct: 579 RAEQLASV 586

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>ZO1_CANFA (O97758) Tight junction protein ZO-1 (Zonula occludens 1 protein)|
           (Zona occludens 1 protein) (Tight junction protein 1)
          Length = 1769

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
 Frame = -3

Query: 430 FKFRTHFGGGKSSGFGLIYDNLEAAKKFEPKYR-LIRNGLATKVEKSRKQIKE----RKN 266
           F  RTHF   K S +GL ++  E  +  +  Y   + + LA ++ K+ K+++      KN
Sbjct: 518 FYIRTHFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKN 577

Query: 265 RTKKIRGV 242
           R +++  V
Sbjct: 578 RAEQLASV 585

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>HEM3_GEOKA (Q5KWK6) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)|
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 309

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
 Frame = +2

Query: 449 VLDLVHLGQPILELRLGDVGAAG--VDDLEHELLAG 550
           V ++V  G  +L++ L  VG  G  V ++EHELLAG
Sbjct: 36  VKEIVTKGDRVLDVTLSKVGGKGLFVKEIEHELLAG 71

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>B3A3_RABIT (O18917) Anion exchange protein 3 (Neuronal band 3-like protein)|
           (Solute carrier family 4 member 3) (Anion exchanger 3
           brain isoform)
          Length = 1233

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 21/64 (32%), Positives = 31/64 (48%)
 Frame = -2

Query: 443 LHLRLQVPHPLRRRQVLRIRSHLRQPRSRQEVRAQVPPHQERSCYQGREVTQADQGKEEQ 264
           L  RL  PH LRR      R H R+ R +++  A  PP +     Q      A +G+EE+
Sbjct: 85  LSARLPPPHKLRRLPPTFAR-HTRRKRKKEKTSA--PPSEGTPPIQEEGGAGAHEGEEEE 141

Query: 263 NKED 252
            +E+
Sbjct: 142 EEEE 145

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>CXA10_HUMAN (P57773) Gap junction alpha-10 protein (Connexin-59) (Cx59)|
           (Connexin-58) (Cx58)
          Length = 515

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -2

Query: 209 ISTFLSSSFHHQPLLGLAPYPCANVAECLIMTRKDFAIYVI 87
           I  +L   FH +PL     +PC N+ +C +    +  I+++
Sbjct: 173 IGQYLLYGFHLEPLFKCHGHPCPNIIDCFVSRPTEKTIFLL 213

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>KI21B_HUMAN (O75037) Kinesin family member 21B|
          Length = 1637

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 17/70 (24%), Positives = 35/70 (50%)
 Frame = -2

Query: 413 LRRRQVLRIRSHLRQPRSRQEVRAQVPPHQERSCYQGREVTQADQGKEEQNKEDPWCEED 234
           L R +   +R   + P  ++  + +    QE S     E  + +  +EE+ +++  CEE+
Sbjct: 548 LERLKKKEVRQRRKSPE-KEAFKKRAKLQQENS----EETDENEAEEEEEERDESGCEEE 602

Query: 233 QGRRCQEEIS 204
           +GR  ++E S
Sbjct: 603 EGREDEDEDS 612

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>TRHY_RABIT (P37709) Trichohyalin|
          Length = 1407

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 20/75 (26%), Positives = 34/75 (45%)
 Frame = -2

Query: 434 RLQVPHPLRRRQVLRIRSHLRQPRSRQEVRAQVPPHQERSCYQGREVTQADQGKEEQNKE 255
           RL     LR RQ+       ++ R R+E   +    QE    +  E  Q  +  ++  +E
Sbjct: 441 RLSARPSLRERQLRAEERQEQEQRFREEEEQRRERRQELQFLEEEEQLQRRERAQQLQEE 500

Query: 254 DPWCEEDQGRRCQEE 210
           D + E+ + RR Q+E
Sbjct: 501 DSFQEDRERRRRQQE 515

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>DHH1_CRYNE (Q5KJI2) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)|
          Length = 625

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 18/82 (21%), Positives = 34/82 (41%)
 Frame = -2

Query: 374 RQPRSRQEVRAQVPPHQERSCYQGREVTQADQGKEEQNKEDPWCEEDQGRRCQEEISTFL 195
           +QP+ RQ     VP HQ           Q  Q +++Q ++    ++ Q ++   +     
Sbjct: 436 QQPQQRQRQHPPVPSHQAAQQSPAAAPVQQQQQQQQQQQQQQQQQQPQYQQAYGQGPPQP 495

Query: 194 SSSFHHQPLLGLAPYPCANVAE 129
            + F  QP    AP P  + ++
Sbjct: 496 QALFQQQPNSSPAPAPLPSYSQ 517

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>CWC21_USTMA (Q4P0G6) Pre-mRNA-splicing factor CWC21|
          Length = 348

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 6/96 (6%)
 Frame = -2

Query: 440 HLRLQVPHPLRRRQVLRI--RSHLRQP----RSRQEVRAQVPPHQERSCYQGREVTQADQ 279
           H ++Q    L RR  + +   S  RQ     R  QE++     HQ+R  YQ R++ +A  
Sbjct: 127 HQQIQTKQHLDRRFAIAVGVESGYRQADAFNRDLQELKKSERIHQQRQAYQQRQLARASH 186

Query: 278 GKEEQNKEDPWCEEDQGRRCQEEISTFLSSSFHHQP 171
              +     P        RC    S   SSS    P
Sbjct: 187 ASTQPPPHPP-------ARCSSTHSQSTSSSSPSSP 215

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>PQQE_METCA (Q608P0) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone|
           biosynthesis protein E)
          Length = 373

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 13/44 (29%), Positives = 28/44 (63%)
 Frame = +2

Query: 455 DLVHLGQPILELRLGDVGAAGVDDLEHELLAGEQAVGHELAGAE 586
           +L+  G  + E+R+ ++ +AG+D ++  + + E+ +  ELAG E
Sbjct: 91  NLITSGYGLDEVRIAELKSAGLDHIQVSIQSPEKLLNDELAGTE 134

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>KI21B_MOUSE (Q9QXL1) Kinesin family member 21B (Kinesin-like protein KIF6)|
          Length = 1668

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
 Frame = -2

Query: 386 RSHLRQPRSRQEVRAQVPPHQERSCYQGREVTQADQGK---EEQNKEDPWCEEDQGRRCQ 216
           +  +RQ R   E  A     ++R+  Q     + D+ +   EE+ +++  CEE++GR  +
Sbjct: 554 KKEVRQRRKSPEKEA----FKKRAKLQAENSEETDENEAEEEEEERDESGCEEEEGREDE 609

Query: 215 EEIS 204
           +E S
Sbjct: 610 DEDS 613

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>LIPB_YEAST (Q06005) Lipoate-protein ligase, mitochondrial precursor (EC|
           6.-.-.-) (Lipoate biosynthesis protein) (Lipoyl ligase)
          Length = 328

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 21/72 (29%), Positives = 33/72 (45%)
 Frame = -3

Query: 553 LARKQFVLEVIHPGRANVSKAELKDRLSKVYEVKDPNCIFVFKFRTHFGGGKSSGFGLIY 374
           + RK   L+  + G A ++  E K  L KV  +K    I  F+F   + GGK     +  
Sbjct: 77  IERKLIQLDEEYKGTATINDNE-KRILDKVMAMKPNPIILTFEFEPTYTGGKRIKKTMTP 135

Query: 373 DNLEAAKKFEPK 338
           D + A + F P+
Sbjct: 136 DQIAAYESFIPE 147

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>VSWB_TRYBR (P20947) Variant surface glycoprotein WRATAT B precursor (VSG)|
          Length = 487

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = -2

Query: 395 LRIRSHLRQPRSRQEVRAQVPPHQERSCYQGREVTQADQGKEEQNKEDPWCEEDQGRRCQ 216
           L+ R  L Q R RQ+ R      + +  YQ     +    KE QNK     + D+ + C+
Sbjct: 355 LKARRLLLQNRERQQTRLMALADKMQELYQEALHDEVQLRKEAQNKPQETPDSDKQKACE 414

Query: 215 E 213
           +
Sbjct: 415 K 415

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>PMM_CAEEL (Q9XUE6) Probable phosphomannomutase (EC 5.4.2.8) (PMM)|
          Length = 245

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +2

Query: 497 GDVGAAGVDDLEHELLAGEQAVGHELAGAEGDRR 598
           GD  A G +D  HE+ A E+ VGH + G E  R+
Sbjct: 204 GDKTAPGGND--HEIFADERTVGHTVEGPEDTRK 235

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>CR030_HUMAN (Q8N787) Protein C18orf30|
          Length = 583

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 17/67 (25%), Positives = 32/67 (47%)
 Frame = -2

Query: 380 HLRQPRSRQEVRAQVPPHQERSCYQGREVTQADQGKEEQNKEDPWCEEDQGRRCQEEIST 201
           HL     + EVR    P +E+      +  + D GK+ +  E+   EE++    +EE ++
Sbjct: 134 HLTASLEKPEVRKLAEPGEEKLEGYSEKAQKGDLGKDSEESEEDGEEEEESE--EEEETS 191

Query: 200 FLSSSFH 180
            L + +H
Sbjct: 192 DLRNKWH 198


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,001,517
Number of Sequences: 219361
Number of extensions: 1252198
Number of successful extensions: 5331
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 4985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5272
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5424720305
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result