| Clone Name | rbags27j03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC132837.11| Mus musculus chromosome 18, clone RP24-490M12, complete sequence Length = 139563 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 acttgttacatgaatgctaat 277 ||||||||||||||||||||| Sbjct: 79034 acttgttacatgaatgctaat 79054
>emb|AL589741.11| Human DNA sequence from clone RP11-372M18 on chromosome 1 Contains a novel gene and the 5' end of a novel gene, complete sequence Length = 159331 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 tcttaaatcttcacccaggct 129 ||||||||||||||||||||| Sbjct: 32849 tcttaaatcttcacccaggct 32829
>emb|AL356219.12| Human DNA sequence from clone RP11-430C15 on chromosome 9 Contains part of the PIP5K1B gene for phosphatidylinositol-4-phosphate 5-kinase, type I, beta (MSS4, STM7) and the 5' end of a novel gene, complete sequence Length = 115469 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 138 aaaatatttcaacactgagcaatta 162 |||||||||||| |||||||||||| Sbjct: 52842 aaaatatttcaatactgagcaatta 52866
>gb|AC092810.2| Homo sapiens chromosome 1 clone RP11-385M4, complete sequence Length = 173917 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 tcttaaatcttcacccaggct 129 ||||||||||||||||||||| Sbjct: 152045 tcttaaatcttcacccaggct 152025
>gb|AC005500.2| Homo sapiens 22q11 PAC Clone Clone p52f6 In DGCR Region, complete sequence Length = 192592 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 catcttaaatcttcacccagg 127 ||||||||||||||||||||| Sbjct: 107177 catcttaaatcttcacccagg 107157
>gb|AC007731.16| Homo sapiens chromosome 22 clone b562f10 map 22q11, complete sequence Length = 182617 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 catcttaaatcttcacccagg 127 ||||||||||||||||||||| Sbjct: 112231 catcttaaatcttcacccagg 112211
>gb|AC005719.2|AC005719 Drosophila melanogaster, chromosome 2L, region 38A5-38B4, BAC clone BACR48M05, complete sequence Length = 188341 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 aaatatttcaacactgagcaa 159 ||||||||||||||||||||| Sbjct: 61078 aaatatttcaacactgagcaa 61058
>gb|AF348119.2| Homo sapiens L-glutaminase gene, complete cds; nuclear gene for mitochondrial product Length = 18084 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 ctgcacttgtcataccctcct 373 ||||||||||||||||||||| Sbjct: 7326 ctgcacttgtcataccctcct 7306
>gb|AC097104.18| Homo sapiens 12 BAC RP11-153M3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 106340 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 ctgcacttgtcataccctcct 373 ||||||||||||||||||||| Sbjct: 14959 ctgcacttgtcataccctcct 14979
>gb|AE003664.3| Drosophila melanogaster chromosome 2L, section 73 of 83 of the complete sequence Length = 266287 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 aaatatttcaacactgagcaa 159 ||||||||||||||||||||| Sbjct: 149429 aaatatttcaacactgagcaa 149449
>gb|AC099795.2| Homo sapiens chromosome 1 clone RP5-848E13, complete sequence Length = 120556 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 aaacattcatgggcaaacaat 56 ||||||||||||||||||||| Sbjct: 70255 aaacattcatgggcaaacaat 70275
>gb|AE001423.1| Plasmodium falciparum 3D7 chromosome 2 section 60 of 73 of the complete sequence Length = 14635 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 taaccaaaaatatttcaaca 151 |||||||||||||||||||| Sbjct: 10142 taaccaaaaatatttcaaca 10123
>emb|BX908387.8| Zebrafish DNA sequence from clone DKEY-45B6 in linkage group 3, complete sequence Length = 212624 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 atatgaactatagattaattcatt 32 ||||||||||| |||||||||||| Sbjct: 64510 atatgaactattgattaattcatt 64487
>gb|AC158393.2| Mus musculus BAC clone RP23-368G21 from chromosome 14, complete sequence Length = 200173 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 caggctcctaaccaaaaata 143 |||||||||||||||||||| Sbjct: 197006 caggctcctaaccaaaaata 197025
>emb|AL591435.10| Human DNA sequence from clone RP11-712I22 on chromosome X, complete sequence Length = 138038 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 catcttaaatcttcacccag 126 |||||||||||||||||||| Sbjct: 131566 catcttaaatcttcacccag 131585
>gb|AC113398.3| Homo sapiens chromosome 5 clone RP11-436H11, complete sequence Length = 172613 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aaaaatatttcaacactgag 156 |||||||||||||||||||| Sbjct: 95588 aaaaatatttcaacactgag 95569
>gb|DP000062.1| Sus scrofa target 117 genomic scaffold Length = 605739 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 catttcattctacaacagat 300 |||||||||||||||||||| Sbjct: 27097 catttcattctacaacagat 27116
>gb|AC036114.7| Homo sapiens chromosome 11, clone RP11-283H3, complete sequence Length = 159851 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 aattaccaagtctagaataa 177 |||||||||||||||||||| Sbjct: 66936 aattaccaagtctagaataa 66955
>gb|DQ103595.1| Arabidopsis arenosa clone BAC 28N14, complete sequence Length = 132056 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 tgtcactttggacgaaacta 254 |||||||||||||||||||| Sbjct: 9262 tgtcactttggacgaaacta 9243
>gb|AC079064.6| Homo sapiens chromosome 11, clone RP11-485O14, complete sequence Length = 164009 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 aattaccaagtctagaataa 177 |||||||||||||||||||| Sbjct: 137919 aattaccaagtctagaataa 137938
>gb|AC152932.2| Xenopus tropicalis clone ISB1-31M3, complete sequence Length = 78419 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 ttgttctttgctgcagtgct 95 |||||||||||||||||||| Sbjct: 8475 ttgttctttgctgcagtgct 8494
>gb|AC020602.6| Homo sapiens BAC clone RP11-461M18 from 2, complete sequence Length = 167227 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 cctggccatcttaaatcttc 120 |||||||||||||||||||| Sbjct: 94573 cctggccatcttaaatcttc 94592
>gb|AC021752.5|AC021752 Homo sapiens chromosome 15 clone CTD-2378E12 map 15q21, complete sequence Length = 100139 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 atcttaaatcttcacccagg 127 |||||||||||||||||||| Sbjct: 85661 atcttaaatcttcacccagg 85680
>gb|AC109327.10| Homo sapiens chromosome 17, clone RP11-93C20, complete sequence Length = 113000 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gcacatttcattctacaaca 297 |||||||||||||||||||| Sbjct: 58038 gcacatttcattctacaaca 58057
>gb|AC022407.6|AC022407 Homo sapiens chromosome 15 clone RP11-105D1 map 15q21.2, complete sequence Length = 143210 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 atcttaaatcttcacccagg 127 |||||||||||||||||||| Sbjct: 44646 atcttaaatcttcacccagg 44665
>gb|AY103550.1| Zea mays PCO151000 mRNA sequence Length = 1722 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 9 atatgaactatagattaattcattacaa 36 ||||| |||||| ||||||||||||||| Sbjct: 150 atatggactatacattaattcattacaa 177
>emb|CT009495.13| Mouse DNA sequence from clone RP23-127E21 on chromosome 14, complete sequence Length = 192786 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 caggctcctaaccaaaaata 143 |||||||||||||||||||| Sbjct: 128721 caggctcctaaccaaaaata 128740
>emb|AL831778.8| Mouse DNA sequence from clone RP23-261L23 on chromosome 4, complete sequence Length = 213495 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 gctcctaaccaaaaatattt 146 |||||||||||||||||||| Sbjct: 2517 gctcctaaccaaaaatattt 2498 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,702,797 Number of Sequences: 3902068 Number of extensions: 4702797 Number of successful extensions: 79028 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 28 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78977 Number of HSP's gapped (non-prelim): 51 length of query: 472 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 450 effective length of database: 17,147,199,772 effective search space: 7716239897400 effective search space used: 7716239897400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)