ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags27i19 |
|---|---|
| Clone Library Name | barley_pub |
>VPP4_HUMAN (Q9HBG4) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 4 (V-ATPase 116-kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform) Length = 840 Score = 87.8 bits (216), Expect = 1e-17 Identities = 42/62 (67%), Positives = 48/62 (77%) Frame = -3 Query: 467 TLGYNNILILAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPF 288 T G+ I+ + I VF TV +LL+ME LSAFLHALRLHWVEFQNKFY GDGYKF+PF Sbjct: 769 TRGWGGIVGVFIIFAVFAVLTVAILLIMEGLSAFLHALRLHWVEFQNKFYVGDGYKFSPF 828 Query: 287 SF 282 SF Sbjct: 829 SF 830
>VPP4_MOUSE (Q920R6) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 4 (V-ATPase 116-kDa isoform a4) (Vacuolar proton translocating ATPase 116 kDa subunit a kidney isoform) Length = 833 Score = 82.4 bits (202), Expect = 6e-16 Identities = 41/65 (63%), Positives = 48/65 (73%) Frame = -3 Query: 461 GYNNILILAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFSF 282 G+ ++ + I VF TV +LLVME LSAFLHALRLHWVEFQNKFYEG G KF+PFSF Sbjct: 764 GWAGLVGVFIIFAVFAVLTVAILLVMEGLSAFLHALRLHWVEFQNKFYEGAGSKFSPFSF 823 Query: 281 ALISE 267 + E Sbjct: 824 KHVLE 828
>VPP1_PONPY (Q5R422) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) Length = 837 Score = 81.6 bits (200), Expect = 1e-15 Identities = 39/60 (65%), Positives = 43/60 (71%) Frame = -3 Query: 446 LILAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 267 L+L F TV +LL+ME LSAFLHALRLHWVEFQNKFY G G+KF PFSF I E Sbjct: 773 LVLFFFFTAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTGFKFLPFSFEHIRE 832
>VPP1_HUMAN (Q93050) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 837 Score = 81.6 bits (200), Expect = 1e-15 Identities = 39/60 (65%), Positives = 43/60 (71%) Frame = -3 Query: 446 LILAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 267 L+L F TV +LL+ME LSAFLHALRLHWVEFQNKFY G G+KF PFSF I E Sbjct: 773 LVLFFFFTAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTGFKFLPFSFEHIRE 832
>VPP2_HUMAN (Q9Y487) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 2 (V-ATPase 116-kDa isoform a2) (TJ6) Length = 856 Score = 81.3 bits (199), Expect = 1e-15 Identities = 37/60 (61%), Positives = 47/60 (78%) Frame = -3 Query: 449 ILILAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALIS 270 +L+L + +F T+ +LL+ME LSAFLHA+RLHWVEFQNKFY G G KF PFSF+L+S Sbjct: 787 VLLLLPVIALFAVLTIFILLIMEGLSAFLHAIRLHWVEFQNKFYVGAGTKFVPFSFSLLS 846
>VPP2_BOVIN (O97681) Vacuolar proton translocating ATPase 116 kDa subunit A| isoform 2 (V-ATPase 116-kDa isoform a2) Length = 854 Score = 80.1 bits (196), Expect = 3e-15 Identities = 37/60 (61%), Positives = 45/60 (75%) Frame = -3 Query: 449 ILILAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALIS 270 +L+L + F T+ +LL+ME LSAFLHA+RLHWVEFQNKFY G G KF PFSF L+S Sbjct: 787 VLVLLPVIAFFAVLTIFILLIMEGLSAFLHAIRLHWVEFQNKFYVGAGTKFVPFSFRLLS 846
>VPP2_MOUSE (P15920) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7) Length = 856 Score = 80.1 bits (196), Expect = 3e-15 Identities = 38/60 (63%), Positives = 46/60 (76%) Frame = -3 Query: 449 ILILAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALIS 270 +L+L + F T+ +LLVME LSAFLHA+RLHWVEFQNKFY G G KF PFSF+L+S Sbjct: 787 VLLLLPVMAFFAVLTIFILLVMEGLSAFLHAIRLHWVEFQNKFYVGAGTKFVPFSFSLLS 846
>VPP1_BOVIN (Q29466) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 838 Score = 79.7 bits (195), Expect = 4e-15 Identities = 37/51 (72%), Positives = 40/51 (78%) Frame = -3 Query: 419 FICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 267 F TV +LL+ME LSAFLHALRLHWVEFQNKFY G G+KF PFSF I E Sbjct: 783 FATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGTGFKFLPFSFEHIRE 833
>VPP1_MOUSE (Q9Z1G4) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase Length = 839 Score = 79.3 bits (194), Expect = 5e-15 Identities = 37/51 (72%), Positives = 40/51 (78%) Frame = -3 Query: 419 FICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 267 F TV +LL+ME LSAFLHALRLHWVEFQNKFY G G+KF PFSF I E Sbjct: 784 FATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYTGTGFKFLPFSFEHIRE 834
>VPP1_RAT (P25286) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 1 (V-ATPase 116-kDa isoform a1) (Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit) (Vacuolar proton pump subunit 1) (Vacuolar adenosine triphosphatase su Length = 838 Score = 79.3 bits (194), Expect = 5e-15 Identities = 37/51 (72%), Positives = 40/51 (78%) Frame = -3 Query: 419 FICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 267 F TV +LL+ME LSAFLHALRLHWVEFQNKFY G G+KF PFSF I E Sbjct: 783 FATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYTGTGFKFLPFSFEHIRE 833
>VPP3_HUMAN (Q13488) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 3 (V-ATPase 116-kDa isoform a3) (Osteoclastic proton pump 116 kDa subunit) (OC-116 kDa) (OC116) (T-cell immune regulator 1) (T cell immune response cDNA7 protein) (TIRC7) Length = 830 Score = 79.0 bits (193), Expect = 6e-15 Identities = 36/47 (76%), Positives = 39/47 (82%) Frame = -3 Query: 419 FICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFA 279 F TV +LLVME LSAFLHALRLHWVEFQNKFY G GYK +PF+FA Sbjct: 780 FAVMTVAILLVMEGLSAFLHALRLHWVEFQNKFYSGTGYKLSPFTFA 826
>VPP1_CAEEL (P30628) Probable vacuolar proton translocating ATPase 116 kDa| subunit a (Uncoordinated protein 32) Length = 905 Score = 78.6 bits (192), Expect = 8e-15 Identities = 40/73 (54%), Positives = 49/73 (67%) Frame = -3 Query: 461 GYNNILILAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFSF 282 GY + I +F +V +L++ME LSAFLHALRLHWVEFQ+KFY G GY+FAPFSF Sbjct: 832 GYTGAIATYILFFIFGSLSVFILVLMEGLSAFLHALRLHWVEFQSKFYGGLGYEFAPFSF 891 Query: 281 ALISEDEE*ARPN 243 I +E A N Sbjct: 892 EKILAEEREAEEN 904
>STV1_YEAST (P37296) Vacuolar ATP synthase subunit a, Golgi isoform (EC 3.6.3.14)| (V-ATPase 101 kDa subunit) (V-ATPase subunit AC115) (Similar to VPH1 protein 1) Length = 890 Score = 66.6 bits (161), Expect = 3e-11 Identities = 35/63 (55%), Positives = 43/63 (68%), Gaps = 5/63 (7%) Frame = -3 Query: 440 LAIGVVVFICA-----TVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFAL 276 LA+ VVF+ A TV +L+ ME SA LHALRLHWVE +KF+EG+GY + PFSF Sbjct: 828 LAVMKVVFLFAMWFVLTVCILVFMEGTSAMLHALRLHWVEAMSKFFEGEGYAYEPFSFRA 887 Query: 275 ISE 267 I E Sbjct: 888 IIE 890
>VPH1_SCHPO (O13742) Probable vacuolar ATP synthase 91 kDa subunit (Vacuolar| ATPase 91 kDa subunit) Length = 805 Score = 60.1 bits (144), Expect = 3e-09 Identities = 27/48 (56%), Positives = 35/48 (72%) Frame = -3 Query: 410 ATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 267 AT VL+ ME SA LH+LRLHWVE +K +EG+GY F PF+F + +E Sbjct: 758 ATCVVLVAMEGTSAMLHSLRLHWVEGMSKHFEGEGYAFTPFTFKVTAE 805
>VPH1_NEUCR (Q01290) Vacuolar ATP synthase 98 kDa subunit (Vacuolar ATPase 98| kDa subunit) Length = 856 Score = 57.4 bits (137), Expect = 2e-08 Identities = 28/68 (41%), Positives = 40/68 (58%) Frame = -3 Query: 461 GYNNILILAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFSF 282 G + L + +F +V +L++ME +SA LH+LRL WVE +KF E G+ F PFSF Sbjct: 782 GLGGAIFLVVAFAMFFVLSVIILIIMEGVSAMLHSLRLAWVESFSKFAEFGGWPFTPFSF 841 Query: 281 ALISEDEE 258 E+ E Sbjct: 842 KQQLEESE 849
>VPH1_YEAST (P32563) Vacuolar ATP synthase subunit a, vacuolar isoform (EC| 3.6.3.14) (V-ATPase a subunit) (Vacuolar proton pump a subunit) (V-ATPase 95 kDa subunit) (Vacuolar pH protein 1) Length = 839 Score = 55.5 bits (132), Expect = 7e-08 Identities = 24/60 (40%), Positives = 37/60 (61%) Frame = -3 Query: 461 GYNNILILAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFSF 282 G+ + + ++ T VL++ME SA LH+LRLHWVE +KF+ G+G + PF+F Sbjct: 762 GFVGVFMTVALFAMWFALTCAVLVLMEGTSAMLHSLRLHWVESMSKFFVGEGLPYEPFAF 821
>VATI_METJA (Q57675) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 695 Score = 52.4 bits (124), Expect = 6e-07 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 3/55 (5%) Frame = -3 Query: 443 ILAIGVVV-FICATVGVLL--VMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPF 288 I IG++V I VG VM L AF+H+LRLH+VEF ++FYEG G KF+PF Sbjct: 632 IPVIGIIVAIIILLVGHTFNFVMNGLGAFIHSLRLHYVEFFSQFYEGGGKKFSPF 686
>VATI_PYRAB (Q9UXU2) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 659 Score = 50.1 bits (118), Expect = 3e-06 Identities = 24/52 (46%), Positives = 33/52 (63%) Frame = -3 Query: 440 LAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFS 285 + IG+V+ I + + L AF+HALRLH+VEF FY G+G KF PF+ Sbjct: 597 ILIGIVILIGGHI-FSTAINALGAFVHALRLHYVEFFGTFYSGEGRKFEPFA 647
>VATI_PYRHO (O57721) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 659 Score = 48.9 bits (115), Expect = 7e-06 Identities = 24/50 (48%), Positives = 32/50 (64%) Frame = -3 Query: 434 IGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFS 285 IG++V I + + L AF+HALRLH+VEF FY G+G KF PF+ Sbjct: 599 IGILVLIGGHI-FSTAINALGAFVHALRLHYVEFFGTFYSGEGRKFEPFA 647
>VATI_METMA (O59659) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 649 Score = 48.1 bits (113), Expect = 1e-05 Identities = 23/59 (38%), Positives = 34/59 (57%) Frame = -3 Query: 458 YNNILILAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFSF 282 ++ I AI ++ G+ ++ ++ LHALRL +VEF KFYEG G KF PF + Sbjct: 584 HSQIGAAAIAAIIVFILGHGLNTILSIIAPGLHALRLQYVEFFGKFYEGGGRKFNPFGY 642
>VATI_HALSA (Q9HND8) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 722 Score = 47.8 bits (112), Expect = 2e-05 Identities = 25/53 (47%), Positives = 34/53 (64%) Frame = -3 Query: 440 LAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFSF 282 + IGV+V + ++L + SA L ALRL +VEF NKFYEG G K+ PF + Sbjct: 663 ILIGVLVLLVGHA-LVLALGVTSAGLQALRLEYVEFFNKFYEGGGEKYNPFGY 714
>VATI_PYRKO (Q5JDS2) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 663 Score = 47.4 bits (111), Expect = 2e-05 Identities = 22/49 (44%), Positives = 31/49 (63%) Frame = -3 Query: 434 IGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPF 288 IG+++F + + L AF+HALRLH+VEF FY G+G +F PF Sbjct: 603 IGLIIFFGGQL-FSTAINALGAFVHALRLHYVEFFGTFYSGEGKRFEPF 650
>VATI_ARCFU (O29106) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 676 Score = 42.7 bits (99), Expect = 5e-04 Identities = 23/54 (42%), Positives = 32/54 (59%) Frame = -3 Query: 449 ILILAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPF 288 I I +G +V + VG L ++ L L +LRLH+VEF KF+EG G + PF Sbjct: 615 ISIPIVGAIVLLIGHVGNL-ILGILDPGLQSLRLHYVEFFTKFFEGGGRLYEPF 667
>VATI_AERPE (Q9YEA0) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 686 Score = 42.0 bits (97), Expect = 9e-04 Identities = 22/62 (35%), Positives = 34/62 (54%) Frame = -3 Query: 476 LILTLGYNNILILAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKF 297 L + + IL +G ++++ + V ME L AF HA RLH+ E+ +KFY G G + Sbjct: 611 LTVMIMQGGILADVVGALLYVGGNLAVA-AMEGLLAFAHASRLHFYEWFSKFYSGTGVPY 669 Query: 296 AP 291 P Sbjct: 670 TP 671
>VATI_SULSO (Q9UWW3) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 701 Score = 41.6 bits (96), Expect = 0.001 Identities = 21/53 (39%), Positives = 32/53 (60%) Frame = -3 Query: 449 ILILAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAP 291 +LI I +++ I + + + +E L F+ LRLH+ E +KFYEG G KF P Sbjct: 642 VLINPIAIIILIIGNL-LAIGLEGLVVFIQDLRLHFYEMFSKFYEGRGRKFEP 693
>NTPI_ENTHR (P43439) V-type sodium ATP synthase subunit I (EC 3.6.3.15)| (Na(+)-translocating ATPase subunit I) Length = 664 Score = 38.9 bits (89), Expect = 0.007 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 9/48 (18%) Frame = -3 Query: 407 TVGVLLV---------METLSAFLHALRLHWVEFQNKFYEGDGYKFAP 291 +VG+LL+ + LSA++H RL +VEF KFY G G F P Sbjct: 602 SVGILLIIVLQALNMFLTLLSAYVHGARLQYVEFFGKFYTGGGRSFKP 649
>VATI_METTH (O27041) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 658 Score = 36.6 bits (83), Expect = 0.036 Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 3/67 (4%) Frame = -3 Query: 479 VLILTLGYNNILILAIGVVVF-ICATVGVLL--VMETLSAFLHALRLHWVEFQNKFYEGD 309 V ILT G + +I IGVV+ I G + ++L AF+++LRLH+VEF +FY G Sbjct: 582 VNILT-GLSYEMIPVIGVVLAPIIFVFGHIANNAFQSLGAFINSLRLHYVEFFAQFYMGG 640 Query: 308 GYKFAPF 288 KF F Sbjct: 641 KNKFNAF 647
>VATI_THEAC (Q9HM61) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 637 Score = 34.3 bits (77), Expect = 0.18 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = -3 Query: 440 LAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPF 288 LAI VV + L++ + RL +VEF +KFY G+G F PF Sbjct: 570 LAIAGVVILIFGQMFNLILAVFEPGIQGARLIYVEFFSKFYHGNGRMFRPF 620
>VATI_CHLPN (Q9Z990) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase| subunit I) Length = 660 Score = 32.7 bits (73), Expect = 0.52 Identities = 16/63 (25%), Positives = 33/63 (52%) Frame = -3 Query: 446 LILAIGVVVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFAPFSFALISE 267 L + +G +V + V +++ + +H LRL+++E+ + ++G G P + SE Sbjct: 587 LPMLLGSIVILLGH-SVNIILSIMGGVIHGLRLNFIEWYHYSFDGGGRPLRPLRKIVCSE 645 Query: 266 DEE 258 D E Sbjct: 646 DAE 648
>RAD5_USTMA (Q4PGG5) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1387 Score = 29.3 bits (64), Expect = 5.7 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 7/45 (15%) Frame = -2 Query: 456 QQHFNPCYWCRCLHLRYCRCVACY-------GDPKCIPSCLEAPL 343 + +PCY RC+H C+ Y GD P+C + P+ Sbjct: 1114 ESQISPCYLPRCMHSACKACLVDYLGQCKQKGDQGACPTCRKGPV 1158
>Y268_RICPR (Q9ZDQ7) Hypothetical protein RP268| Length = 215 Score = 28.9 bits (63), Expect = 7.5 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = -3 Query: 476 LILTLGYNNILILAIGVVVFICATVGVLLVMETLSAFLHALRL 348 L+L++ +I A V +FIC TVG++ V+ + F + L Sbjct: 80 LLLSIVSCEKIIFAKFVAIFICTTVGLIFVLPVIYVFFDQILL 122
>RNBR_BOVIN (P39873) Brain ribonuclease precursor (EC 3.1.27.-) (BRB)| Length = 167 Score = 28.9 bits (63), Expect = 7.5 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = +3 Query: 300 LVTITLIELVLELHPVEPQGMKECT*GLHNKQHTDSSADEDNDTN 434 LV ++L+ LVL L V+P KE +QH DS + ++ N Sbjct: 6 LVLLSLLVLVLLLVQVQPSLGKESAAAKFRRQHMDSGSSSSSNPN 50
>RNAS1_BOVIN (P61823) Ribonuclease pancreatic precursor (EC 3.1.27.5) (RNase 1)| (RNase A) Length = 150 Score = 28.9 bits (63), Expect = 7.5 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +3 Query: 300 LVTITLIELVLELHPVEPQGMKECT*GLHNKQHTDSSADEDNDTN 434 LV ++L+ LVL L V+P KE +QH DSS + +N Sbjct: 6 LVLLSLLVLVLLLVRVQPSLGKETAAAKFERQHMDSSTSAASSSN 50
>GP141_HUMAN (Q7Z602) Probable G-protein coupled receptor 141 (G-protein coupled| receptor PGR13) Length = 305 Score = 28.9 bits (63), Expect = 7.5 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 9/60 (15%) Frame = -3 Query: 464 LGYNNILILAIGVVVFICATVGVLLVMETLSAFL------HALRLH---WVEFQNKFYEG 312 L Y + I+ +V+F+ A +LLV + L H+L H W + +N F+ G Sbjct: 173 LAYTYVKIINYMIVIFVIAVAVILLVFQVFIIMLMVQKLRHSLLSHQEFWAQLKNLFFIG 232
>RHG25_HUMAN (P42331) Rho-GTPase-activating protein 25| Length = 638 Score = 28.5 bits (62), Expect = 9.7 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = -3 Query: 269 EDEE*ARPNSCIYCSLCNILRVALLPEQS 183 +DEE +P C+Y C I +A PE++ Sbjct: 72 KDEEDTKPQGCMYLPGCTIKEIATNPEEA 100 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,730,716 Number of Sequences: 219361 Number of extensions: 1451238 Number of successful extensions: 3863 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 3659 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3861 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
