Clone Name	rbags27i18
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK103541.1| Oryza sativa (japonica cultivar-group) cDNA clon...	478	e-131
2	dbj|AB026562.1| Oryza sativa (japonica cultivar-group) OsPAG1 mR...	478	e-131
3	ref|NM_191042.1| Oryza sativa (japonica cultivar-group), predic...	474	e-130
4	dbj|AK061784.1| Oryza sativa (japonica cultivar-group) cDNA clon...	454	e-124
5	ref|XM_475461.1| Oryza sativa (japonica cultivar-group), predic...	438	e-119
6	gb|BT017777.1| Zea mays clone EL01N0503B10.c mRNA sequence	303	4e-79
7	gb|AY109645.1| Zea mays CL4356_2 mRNA sequence	289	6e-75
8	gb|BT017004.1| Zea mays clone EK07D2310A08.c mRNA sequence	165	2e-37
9	gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome...	153	9e-34
10	gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL03...	153	9e-34
11	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	153	9e-34
12	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	143	8e-31
13	dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic D...	143	8e-31
14	dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic D...	143	8e-31
15	ref|NM_128260.3| Arabidopsis thaliana PAG1; endopeptidase/ pepti...	127	5e-26
16	emb|Y13693.1|ATY13693 Arabidopsis thaliana mRNA for proteasome s...	127	5e-26
17	gb|AY124806.1| Arabidopsis thaliana At2g27020/T20P8.7 mRNA, comp...	127	5e-26
18	gb|AF375455.1| Arabidopsis thaliana At2g27020/T20P8.7 mRNA, comp...	127	5e-26
19	gb|AF043528.1|AF043528 Arabidopsis thaliana 20S proteasome subun...	127	5e-26
20	emb|BX819273.1|CNS0A9VK Arabidopsis thaliana Full-length cDNA Co...	119	1e-23
21	gb|AY088609.1| Arabidopsis thaliana clone 8342 mRNA, complete se...	119	1e-23
22	dbj|D78173.1| Spinacia oleracea mRNA for 26S proteasome alpha su...	103	7e-19
23	gb|BT013996.1| Lycopersicon esculentum clone 133043F, mRNA sequence	90	1e-14
24	gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P8 map...	82	3e-12
25	emb|AJ291738.1|NTA291738 Nicotiana tabacum mRNA for putative alp...	58	4e-05
26	dbj|AB210519.1| Ciona intestinalis mRNA for Janus kinase, comple...	44	0.57
27	gb|AC154801.2| Mus musculus BAC clone RP24-500P8 from chromosome...	44	0.57
28	gb|AC160643.2| Gallus gallus BAC clone CH261-123L21 from chromos...	44	0.57
29	gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome	44	0.57
30	gb|AC136969.2| Oryza sativa (japonica cultivar-group) chromosome...	42	2.2
31	gb|AC168148.15| Medicago truncatula clone mth2-80b11, complete s...	42	2.2
32	gb|AC142394.19| Medicago truncatula clone mth2-11d4, complete se...	42	2.2
33	gb|AC152407.19| Medicago truncatula clone mth2-77l23, complete s...	42	2.2
34	gb|AC147435.22| Medicago truncatula clone mth2-19c18, complete s...	42	2.2
35	gb|AF055983.1| Mus musculus proteasome alpha7/C8 subunit mRNA, c...	42	2.2
36	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	42	2.2
37	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	42	2.2
38	gb|AC147481.3| Medicago truncatula chromosome 2 BAC clone mth2-1...	42	2.2
39	gb|BC091743.1| Mus musculus proteasome (prosome, macropain) subu...	42	2.2
40	dbj|AK104583.1| Oryza sativa (japonica cultivar-group) cDNA clon...	42	2.2
41	dbj|AK101778.1| Oryza sativa (japonica cultivar-group) cDNA clon...	42	2.2
42	dbj|AK060359.1| Oryza sativa (japonica cultivar-group) cDNA clon...	42	2.2
43	dbj|AK059980.1| Oryza sativa (japonica cultivar-group) cDNA clon...	42	2.2
44	gb|AF060089.1|AF060089 Mus musculus proteasome subunit C8 (Psma3...	42	2.2
45	emb|AL929191.9| Mouse DNA sequence from clone RP23-330G15 on chr...	42	2.2
46	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	42	2.2
47	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	42	2.2
48	emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC OJ1126...	42	2.2
49	gb|AC154374.1| Mus musculus BAC clone RP23-81F24 from 9, complet...	42	2.2
50	gb|AC102303.10| Mus musculus chromosome 1, clone RP24-403I11, co...	40	8.8
51	gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete ...	40	8.8
52	gb|AC157933.4| Mus musculus chromosome 5, clone RP24-189N4, comp...	40	8.8
53	gb|BC097109.1| Danio rerio zgc:114044, mRNA (cDNA clone MGC:1140...	40	8.8
54	gb|AY619371.1| Daphnia pulicaria clone WFms0000362 microsatellit...	40	8.8
55	gb|AC137610.2| Oryza sativa (japonica cultivar-group) chromosome...	40	8.8
56	ref|NM_001030187.1| Danio rerio zgc:114044 (zgc:114044), mRNA	40	8.8
57	ref|XM_753392.1| Ustilago maydis 521 hypothetical protein (UM023...	40	8.8
58	gb|AC117213.3| Mus musculus BAC clone RP23-305J6 from 6, complet...	40	8.8
59	gb|BC041518.1| Xenopus laevis proteasome (prosome, macropain) su...	40	8.8
60	gb|AC098727.3| Mus musculus BAC clone RP23-3H16 from 4, complete...	40	8.8
61	emb|CR936847.6| Mouse DNA sequence from clone DN-393H17 on chrom...	40	8.8
62	emb|AL596136.5| Mouse DNA sequence from clone RP23-83I13 on chro...	40	8.8
63	emb|AL663103.4| Mouse DNA sequence from clone RP23-267D13 on chr...	40	8.8
64	emb|AJ719536.1| Gallus gallus mRNA for hypothetical protein, clo...	40	8.8
65	emb|AJ866853.1| Hordeum vulgare subsp. vulgare transposon MITE J...	40	8.8
66	emb|AJ866913.1| Hordeum vulgare subsp. vulgare transposon MITE J...	40	8.8
67	emb|AJ866910.1| Hordeum vulgare subsp. vulgare transposon MITE J...	40	8.8
68	emb|AJ866883.1| Hordeum vulgare subsp. vulgare transposon MITE J...	40	8.8
69	emb|AJ866882.1| Hordeum vulgare subsp. vulgare transposon MITE J...	40	8.8
70	gb|AC008813.6| Homo sapiens chromosome 19 clone CTD-2102P23, com...	40	8.8
71	gb|AC138449.10| Medicago truncatula clone mth2-14o23, complete s...	40	8.8
72	gb|AC079460.19| Homo sapiens 12 BAC RP11-297L6 (Roswell Park Can...	40	8.8
73	gb|AC113429.2| Homo sapiens chromosome 5 clone RP11-775H7, compl...	40	8.8
74	gb|AC157786.7| Mus musculus chromosome 1, clone RP23-280O23, com...	40	8.8
75	gb|AC164093.2| Mus musculus BAC clone RP23-131O16 from chromosom...	40	8.8
76	dbj|AK084370.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ...	40	8.8
77	gb|AE006470.1| Chlorobium tepidum TLS, complete genome	40	8.8
78	gb|AC007248.4| Homo sapiens BAC clone RP11-315O22 from 2, comple...	40	8.8
79	gb|AF272705.1|F4I4 Arabidopsis thaliana BAC F4I4	40	8.8
80	gb|AE014133.1| Streptococcus mutans UA159, complete genome	40	8.8
81	emb|CT954231.1| Medicago truncatula chromosome 5 clone mth2-166e...	40	8.8
82	emb|AL691475.18| Mouse DNA sequence from clone RP23-264P11 on ch...	40	8.8
83	emb|CT010583.8| Mouse DNA sequence from clone RP23-203B24 on chr...	40	8.8
84	gb|M98497.1|CHKRHOPR Chicken rhodopsin gene, promoter region	40	8.8

---

>dbj|AK103541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132C12, full
            insert sequence
          Length = 1188

 Score =  478 bits (241), Expect = e-131
 Identities = 376/421 (89%)
 Strand = Plus / Minus

                                                                        
Query: 228  tctcttcttagtcggcatccatctcttccaacgctgcctgtgctgctgccttggcctgct 287
            |||| ||||| || ||||||||||| || | ||||||||| |||||  ||||||||||||
Sbjct: 1011 tctcctcttaatcagcatccatctcctcaagcgctgcctgagctgcaaccttggcctgct 952

                                                                        
Query: 288  ccagaagatcatttggaaccttctcatgctgacggttagattcatcgcacacccagctta 347
            ||| |||||||   |||||||||| |||||| || || |||||||| || | ||||||||
Sbjct: 951  ccaaaagatcagcaggaaccttctgatgctggcgatttgattcatcacatatccagctta 892

                                                                        
Query: 348  gttccagctcaaaagatttgtcttttgcttcatcgtgtataccataaattatcttggcaa 407
             ||||| |||||||| |||||| || |||||||| ||||  |||||||| ||||| ||||
Sbjct: 891  attccaactcaaaagctttgtccttagcttcatcatgtactccataaatgatctttgcaa 832

                                                                        
Query: 408  cctcaacaatgccttccctgcaggttagctcagaaagcttcaatttctctatctccgttt 467
            |||| ||||||||||||| |||||| ||||| ||||||||||| |||||||| || ||||
Sbjct: 831  cctccacaatgccttcccggcaggtaagctcggaaagcttcaacttctctatttcagttt 772

                                                                        
Query: 468  ttgcagcctgtcttcctttacccagagcagcaccaaaatatttatatgagagccctgaag 527
            ||||||||||||||||||||||||||||||||||||| ||||| |||||||  ||||| |
Sbjct: 771  ttgcagcctgtcttcctttacccagagcagcaccaaagtatttgtatgagactcctgagg 712

                                                                        
Query: 528  gttcgatcatgtagagctgtggcccatccctatcataacctccaagaataactccacagc 587
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 711  gttcgatcatgtagagctgtggcccatccctatcataacctccaagaataactccacaac 652

                                                                        
Query: 588  caaaaggcctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcag 647
            ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 651  caaaaggcctgagccaccagtagagtgtacaaagatgaacgtagctagccacacgatcag 592

             
Query: 648  c 648
            |
Sbjct: 591  c 591

---

>dbj|AB026562.1| Oryza sativa (japonica cultivar-group) OsPAG1 mRNA for alpha 7
           subunit of 20S proteasome, complete cds
          Length = 1091

 Score =  478 bits (241), Expect = e-131
 Identities = 376/421 (89%)
 Strand = Plus / Minus

                                                                       
Query: 228 tctcttcttagtcggcatccatctcttccaacgctgcctgtgctgctgccttggcctgct 287
           |||| ||||| || ||||||||||| || | ||||||||| |||||  ||||||||||||
Sbjct: 907 tctcctcttaatcagcatccatctcctcaagcgctgcctgagctgcaaccttggcctgct 848

                                                                       
Query: 288 ccagaagatcatttggaaccttctcatgctgacggttagattcatcgcacacccagctta 347
           ||| |||||||   |||||||||| |||||| || || |||||||| || | ||||||||
Sbjct: 847 ccaaaagatcagcaggaaccttctgatgctggcgatttgattcatcacatatccagctta 788

                                                                       
Query: 348 gttccagctcaaaagatttgtcttttgcttcatcgtgtataccataaattatcttggcaa 407
            ||||| |||||||| |||||| || |||||||| ||||  |||||||| ||||| ||||
Sbjct: 787 attccaactcaaaagctttgtccttagcttcatcatgtactccataaatgatctttgcaa 728

                                                                       
Query: 408 cctcaacaatgccttccctgcaggttagctcagaaagcttcaatttctctatctccgttt 467
           |||| ||||||||||||| |||||| ||||| ||||||||||| |||||||| || ||||
Sbjct: 727 cctccacaatgccttcccggcaggtaagctcggaaagcttcaacttctctatttcagttt 668

                                                                       
Query: 468 ttgcagcctgtcttcctttacccagagcagcaccaaaatatttatatgagagccctgaag 527
           ||||||||||||||||||||||||||||||||||||| ||||| |||||||  ||||| |
Sbjct: 667 ttgcagcctgtcttcctttacccagagcagcaccaaagtatttgtatgagactcctgagg 608

                                                                       
Query: 528 gttcgatcatgtagagctgtggcccatccctatcataacctccaagaataactccacagc 587
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 607 gttcgatcatgtagagctgtggcccatccctatcataacctccaagaataactccacaac 548

                                                                       
Query: 588 caaaaggcctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcag 647
           ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 547 caaaaggcctgagccaccagtagagtgtacaaagatgaacgtagctagccacacgatcag 488

            
Query: 648 c 648
           |
Sbjct: 487 c 487

---

>ref|NM_191042.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 750

 Score =  474 bits (239), Expect = e-130
 Identities = 365/407 (89%)
 Strand = Plus / Minus

                                                                       
Query: 242 gcatccatctcttccaacgctgcctgtgctgctgccttggcctgctccagaagatcattt 301
           ||||||||||| || | ||||||||| |||||  ||||||||||||||| |||||||   
Sbjct: 743 gcatccatctcctcaagcgctgcctgagctgcaaccttggcctgctccaaaagatcagca 684

                                                                       
Query: 302 ggaaccttctcatgctgacggttagattcatcgcacacccagcttagttccagctcaaaa 361
           |||||||||| |||||| || || |||||||| || | |||||||| ||||| |||||||
Sbjct: 683 ggaaccttctgatgctggcgatttgattcatcacatatccagcttaattccaactcaaaa 624

                                                                       
Query: 362 gatttgtcttttgcttcatcgtgtataccataaattatcttggcaacctcaacaatgcct 421
           | |||||| || |||||||| ||||  |||||||| ||||| |||||||| |||||||||
Sbjct: 623 gctttgtccttagcttcatcatgtactccataaatgatctttgcaacctccacaatgcct 564

                                                                       
Query: 422 tccctgcaggttagctcagaaagcttcaatttctctatctccgtttttgcagcctgtctt 481
           |||| |||||| ||||| ||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 563 tcccggcaggtaagctcggaaagcttcaacttctctatttcagtttttgcagcctgtctt 504

                                                                       
Query: 482 cctttacccagagcagcaccaaaatatttatatgagagccctgaaggttcgatcatgtag 541
           ||||||||||||||||||||||| ||||| |||||||  ||||| |||||||||||||||
Sbjct: 503 cctttacccagagcagcaccaaagtatttgtatgagactcctgagggttcgatcatgtag 444

                                                                       
Query: 542 agctgtggcccatccctatcataacctccaagaataactccacagccaaaaggcctgagc 601
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 443 agctgtggcccatccctatcataacctccaagaataactccacaaccaaaaggcctgagc 384

                                                          
Query: 602 caccagtagagtgtacacagatgaacgtagctagctacacgatcagc 648
           ||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 383 caccagtagagtgtacaaagatgaacgtagctagccacacgatcagc 337

---

>dbj|AK061784.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E06, full
           insert sequence
          Length = 1120

 Score =  454 bits (229), Expect = e-124
 Identities = 374/421 (88%), Gaps = 1/421 (0%)
 Strand = Plus / Minus

                                                                       
Query: 228 tctcttcttagtcggcatccatctcttccaacgctgcctgtgctgctgccttggcctgct 287
           |||| ||||| || ||||||||||| || | ||||||||| |||||  ||||||||||||
Sbjct: 943 tctcctcttaatcagcatccatctcctcaagcgctgcctgagctgcaaccttggcctgct 884

                                                                       
Query: 288 ccagaagatcatttggaaccttctcatgctgacggttagattcatcgcacacccagctta 347
           ||| |||||||   |||||||||| |||||| || || |||||||| || | ||||||||
Sbjct: 883 ccaaaagatcagcaggaaccttctgatgctggcgatttgattcatcacatatccagctta 824

                                                                       
Query: 348 gttccagctcaaaagatttgtcttttgcttcatcgtgtataccataaattatcttggcaa 407
            ||||| |||||||| |||||| || |||||||| ||||  |||||||| ||||| ||||
Sbjct: 823 attccaactcaaaagctttgtccttagcttcatcatgtactccataaatgatctttgcaa 764

                                                                       
Query: 408 cctcaacaatgccttccctgcaggttagctcagaaagcttcaatttctctatctccgttt 467
           |||| ||||||||||||| |||||| ||||| ||||||||||| |||||||| || ||||
Sbjct: 763 cctccacaatgccttcccggcaggtaagctcggaaagcttcaacttctctatttcagttt 704

                                                                       
Query: 468 ttgcagcctgtcttcctttacccagagcagcaccaaaatatttatatgagagccctgaag 527
           ||||||||||||||||||||||||||||||||||||| ||||| |||||||  ||||| |
Sbjct: 703 ttgcagcctgtcttcctttacccagagcagcaccaaagtatttgtatgagactcctgagg 644

                                                                       
Query: 528 gttcgatcatgtagagctgtggcccatccctatcataacctccaagaataactccacagc 587
           ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 643 gttcgatcat-aagagctgtggcccatccctatcataacctccaagaataactccacaac 585

                                                                       
Query: 588 caaaaggcctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcag 647
           ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 584 caaaaggcctgagccaccagtagagtgtacaaagatgaacgtagctagccacacgatcag 525

            
Query: 648 c 648
           |
Sbjct: 524 c 524

---

>ref|XM_475461.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 750

 Score =  438 bits (221), Expect = e-119
 Identities = 365/413 (88%)
 Strand = Plus / Minus

                                                                       
Query: 236 tagtcggcatccatctcttccaacgctgcctgtgctgctgccttggcctgctccagaaga 295
           ||||| || |||||||| || | ||||||||| || |||||||| ||||||||||  || 
Sbjct: 749 tagtctgcgtccatctcctcgagcgctgcctgggcggctgccttcgcctgctccacgagg 690

                                                                       
Query: 296 tcatttggaaccttctcatgctgacggttagattcatcgcacacccagcttagttccagc 355
           || | |||||||||||||||||| || || ||||||||||| |||||||| || ||||| 
Sbjct: 689 tcgtctggaaccttctcatgctggcgctttgattcatcgcatacccagctcagctccagt 630

                                                                       
Query: 356 tcaaaagatttgtcttttgcttcatcgtgtataccataaattatcttggcaacctcaaca 415
           |||||   ||||||||| ||||| || || |  ||||| |||||||| ||||||||||||
Sbjct: 629 tcaaagtctttgtctttagcttcgtcatgcactccatagattatctttgcaacctcaaca 570

                                                                       
Query: 416 atgccttccctgcaggttagctcagaaagcttcaatttctctatctccgtttttgcagcc 475
           |||||||| ||||| || ||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 569 atgccttctctgcatgtaagctcagaaagattcagtttctctatctccgtttttgcagcc 510

                                                                       
Query: 476 tgtcttcctttacccagagcagcaccaaaatatttatatgagagccctgaaggttcgatc 535
           ||||||||||| ||||| |||||||| || |||||||| |||||||| ||||||||||||
Sbjct: 509 tgtcttcctttccccagggcagcaccgaagtatttataggagagccccgaaggttcgatc 450

                                                                       
Query: 536 atgtagagctgtggcccatccctatcataacctccaagaataactccacagccaaaaggc 595
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 atgtagagttgtggcccatccctatcataacctccaagaataactccacagccaaaaggc 390

                                                                
Query: 596 ctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcagc 648
           ||||||||||||||||| ||||| | ||| || ||||||||||||||||||||
Sbjct: 389 ctgagccaccagtagagggtacataaatgtacatagctagctacacgatcagc 337

---

>gb|BT017777.1| Zea mays clone EL01N0503B10.c mRNA sequence
          Length = 1266

 Score =  303 bits (153), Expect = 4e-79
 Identities = 351/417 (84%)
 Strand = Plus / Minus

                                                                       
Query: 232 ttcttagtcggcatccatctcttccaacgctgcctgtgctgctgccttggcctgctccag 291
           ||||||||| ||||||||||| || |  |||||||| || || || ||||||||||||| 
Sbjct: 939 ttcttagtcagcatccatctcctcaagagctgcctgagcagcagctttggcctgctccaa 880

                                                                       
Query: 292 aagatcatttggaaccttctcatgctgacggttagattcatcgcacacccagcttagttc 351
            || ||||||||| |||||| |||||||||||| |||||||| || | |||||| |  ||
Sbjct: 879 cagttcatttggacccttctgatgctgacggttcgattcatcacagatccagctcaactc 820

                                                                       
Query: 352 cagctcaaaagatttgtcttttgcttcatcgtgtataccataaattatcttggcaacctc 411
           || |||||||| |||||| || ||||| || || |  |||||||||||||| ||||| ||
Sbjct: 819 caactcaaaagctttgtccttcgcttcgtcatgcactccataaattatctttgcaacttc 760

                                                                       
Query: 412 aacaatgccttccctgcaggttagctcagaaagcttcaatttctctatctccgtttttgc 471
           |||||||||||||| |||||| ||||| ||||| ||||| || |||||||| || |||||
Sbjct: 759 aacaatgccttcccggcaggtaagctccgaaagtttcaacttttctatctcagtctttgc 700

                                                                       
Query: 472 agcctgtcttcctttacccagagcagcaccaaaatatttatatgagagccctgaaggttc 531
           ||||||||| || || ||||  |||||||| || ||||| || || |  ||||| |||||
Sbjct: 699 agcctgtctccccttccccaatgcagcaccgaagtatttgtaggaaactcctgagggttc 640

                                                                       
Query: 532 gatcatgtagagctgtggcccatccctatcataacctccaagaataactccacagccaaa 591
            |||||||||||||||||||||||||||||||||||||| |||||||| || || |||||
Sbjct: 639 tatcatgtagagctgtggcccatccctatcataacctcctagaataacaccgcaaccaaa 580

                                                                    
Query: 592 aggcctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcagc 648
           |||||||||||||||||| || || || |||||||| || || || |||||||||||
Sbjct: 579 aggcctgagccaccagtacagcgtgcaaagatgaacataacttgccacacgatcagc 523

---

>gb|AY109645.1| Zea mays CL4356_2 mRNA sequence
          Length = 1252

 Score =  289 bits (146), Expect = 6e-75
 Identities = 347/414 (83%)
 Strand = Plus / Plus

                                                                       
Query: 232 ttcttagtcggcatccatctcttccaacgctgcctgtgctgctgccttggcctgctccag 291
           ||||||||| ||||||||||| || |  |||||||| || || || ||||||||||||| 
Sbjct: 284 ttcttagtcagcatccatctcctcaagagctgcctgagcagcagctttggcctgctccaa 343

                                                                       
Query: 292 aagatcatttggaaccttctcatgctgacggttagattcatcgcacacccagcttagttc 351
            || |||||||||||||||| |||||| ||||| |||||||| || | |||||| |  ||
Sbjct: 344 cagttcatttggaaccttctgatgctggcggttcgattcatcacagatccagctcaactc 403

                                                                       
Query: 352 cagctcaaaagatttgtcttttgcttcatcgtgtataccataaattatcttggcaacctc 411
           || |||||||| |||||| || ||||| || || |  |||||||||||||| ||||| ||
Sbjct: 404 caactcaaaagctttgtccttcgcttcgtcatgcactccataaattatctttgcaacttc 463

                                                                       
Query: 412 aacaatgccttccctgcaggttagctcagaaagcttcaatttctctatctccgtttttgc 471
           |||||||||||| | |||||| ||||| ||||| ||||| || |||||||| || |||||
Sbjct: 464 aacaatgccttctcggcaggtaagctccgaaagtttcaacttttctatctcagtctttgc 523

                                                                       
Query: 472 agcctgtcttcctttacccagagcagcaccaaaatatttatatgagagccctgaaggttc 531
           |||||| ||||| || ||||  |||||||| || |||||||| || |  ||||| || ||
Sbjct: 524 agcctgccttcccttccccaatgcagcaccgaagtatttataggaaactcctgagggctc 583

                                                                       
Query: 532 gatcatgtagagctgtggcccatccctatcataacctccaagaataactccacagccaaa 591
            |||||||| |||||||||||||||||||||||||||||||||||||| || || |||||
Sbjct: 584 tatcatgtaaagctgtggcccatccctatcataacctccaagaataacaccgcaaccaaa 643

                                                                 
Query: 592 aggcctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatc 645
           ||| |||||||||||||| || || || |||||||| || || |||||||||||
Sbjct: 644 aggtctgagccaccagtacagcgtgcaaagatgaacataacttgctacacgatc 697

---

>gb|BT017004.1| Zea mays clone EK07D2310A08.c mRNA sequence
          Length = 1256

 Score =  165 bits (83), Expect = 2e-37
 Identities = 194/231 (83%)
 Strand = Plus / Minus

                                                                        
Query: 232  ttcttagtcggcatccatctcttccaacgctgcctgtgctgctgccttggcctgctccag 291
            ||||||||| ||||||||||| || |  |||||||| || || || ||||||||||||| 
Sbjct: 1003 ttcttagtcagcatccatctcctcaagagctgcctgagcagcagctttggcctgctccaa 944

                                                                        
Query: 292  aagatcatttggaaccttctcatgctgacggttagattcatcgcacacccagcttagttc 351
             || |||||||||||||||| |||||||||||| |||||||| || | |||||| |  ||
Sbjct: 943  cagttcatttggaaccttctgatgctgacggttcgattcatcacagatccagctcaactc 884

                                                                        
Query: 352  cagctcaaaagatttgtcttttgcttcatcgtgtataccataaattatcttggcaacctc 411
            || |||||||| |||||| || ||||| || || |  |||||||||||||| ||||| ||
Sbjct: 883  caactcaaaagctttgtccttcgcttcgtcatgcactccataaattatctttgcaacttc 824

                                                               
Query: 412  aacaatgccttccctgcaggttagctcagaaagcttcaatttctctatctc 462
            |||||||||||||| |||||| ||||| ||||| ||||| || ||||||||
Sbjct: 823  aacaatgccttcccggcaggtaagctccgaaagtttcaacttttctatctc 773



 Score =  155 bits (78), Expect = 2e-34
 Identities = 156/182 (85%)
 Strand = Plus / Minus

                                                                       
Query: 467 tttgcagcctgtcttcctttacccagagcagcaccaaaatatttatatgagagccctgaa 526
           |||||||||||||| || || ||||  |||||||| || ||||| || || |  ||||| 
Sbjct: 698 tttgcagcctgtctccccttccccaatgcagcaccgaagtatttgtaggaaactcctgag 639

                                                                       
Query: 527 ggttcgatcatgtagagctgtggcccatccctatcataacctccaagaataactccacag 586
           ||||| |||||||||||||||||||||||||||||||||||||| |||||||| || || 
Sbjct: 638 ggttctatcatgtagagctgtggcccatccctatcataacctcctagaataacaccgcaa 579

                                                                       
Query: 587 ccaaaaggcctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatca 646
           ||||||||||||||||||||||| || || || |||||||| || || || |||||||||
Sbjct: 578 ccaaaaggcctgagccaccagtacagcgtgcaaagatgaacataacttgccacacgatca 519

             
Query: 647 gc 648
           ||
Sbjct: 518 gc 517

---

>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0088I06, complete sequence
          Length = 187651

 Score =  153 bits (77), Expect = 9e-34
 Identities = 83/85 (97%)
 Strand = Plus / Plus

                                                                         
Query: 515   gagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacctccaaga 574
             |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 47901 gagagccccgaaggttcgatcatgtagagttgtggcccatccctatcataacctccaaga 47960

                                      
Query: 575   ataactccacagccaaaaggcctga 599
             |||||||||||||||||||||||||
Sbjct: 47961 ataactccacagccaaaaggcctga 47985



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                         
Query: 398   atcttggcaacctcaacaatgccttccctgcaggttagctcagaaagcttcaatttctct 457
             ||||| |||||||||||||||||||| ||||| || ||||||||||| |||| |||||||
Sbjct: 46785 atctttgcaacctcaacaatgccttctctgcatgtaagctcagaaagattcagtttctct 46844

                   
Query: 458   atctcc 463
             ||||||
Sbjct: 46845 atctcc 46850



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                   
Query: 595   cctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcagc 648
             |||||||||||||||||| ||||| | ||| || ||||||||||||||||||||
Sbjct: 48058 cctgagccaccagtagagggtacataaatgtacatagctagctacacgatcagc 48111



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                             
Query: 463   cgtttttgcagcctgtcttcctttacccagagcagcaccaaaatattt 510
             |||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 47618 cgtttttgcagcctgtcttcctttccccagggcagcaccgaagtattt 47665



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                         
Query: 305   accttctcatgctgacggttagattcatcgcacacccagcttagttccagctcaaaagat 364
             |||||||||||||| || || ||||||||||| |||||||| || ||||| |||||   |
Sbjct: 46196 accttctcatgctggcgctttgattcatcgcatacccagctcagctccagttcaaagtct 46255

                           
Query: 365   ttgtcttttgcttc 378
             |||||||| |||||
Sbjct: 46256 ttgtctttagcttc 46269

---

>gb|AY459341.1| Oryza sativa (japonica cultivar-group) clone CL031105.6 R2R3-MYB gene
             region
          Length = 58956

 Score =  153 bits (77), Expect = 9e-34
 Identities = 83/85 (97%)
 Strand = Plus / Minus

                                                                         
Query: 515   gagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacctccaaga 574
             |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 32993 gagagccccgaaggttcgatcatgtagagttgtggcccatccctatcataacctccaaga 32934

                                      
Query: 575   ataactccacagccaaaaggcctga 599
             |||||||||||||||||||||||||
Sbjct: 32933 ataactccacagccaaaaggcctga 32909



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                         
Query: 398   atcttggcaacctcaacaatgccttccctgcaggttagctcagaaagcttcaatttctct 457
             ||||| |||||||||||||||||||| ||||| || ||||||||||| |||| |||||||
Sbjct: 34111 atctttgcaacctcaacaatgccttctctgcatgtaagctcagaaagattcagtttctct 34052

                   
Query: 458   atctcc 463
             ||||||
Sbjct: 34051 atctcc 34046



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                   
Query: 595   cctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcagc 648
             |||||||||||||||||| ||||| | ||| || ||||||||||||||||||||
Sbjct: 32836 cctgagccaccagtagagggtacataaatgtacatagctagctacacgatcagc 32783



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                             
Query: 463   cgtttttgcagcctgtcttcctttacccagagcagcaccaaaatattt 510
             |||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 33278 cgtttttgcagcctgtcttcctttccccagggcagcaccgaagtattt 33231



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                         
Query: 305   accttctcatgctgacggttagattcatcgcacacccagcttagttccagctcaaaagat 364
             |||||||||||||| || || ||||||||||| |||||||| || ||||| |||||   |
Sbjct: 34700 accttctcatgctggcgctttgattcatcgcatacccagctcagctccagttcaaagtct 34641

                           
Query: 365   ttgtcttttgcttc 378
             |||||||| |||||
Sbjct: 34640 ttgtctttagcttc 34627

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  153 bits (77), Expect = 9e-34
 Identities = 83/85 (97%)
 Strand = Plus / Plus

                                                                            
Query: 515      gagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacctccaaga 574
                |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 23979412 gagagccccgaaggttcgatcatgtagagttgtggcccatccctatcataacctccaaga 23979471

                                         
Query: 575      ataactccacagccaaaaggcctga 599
                |||||||||||||||||||||||||
Sbjct: 23979472 ataactccacagccaaaaggcctga 23979496



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                            
Query: 398      atcttggcaacctcaacaatgccttccctgcaggttagctcagaaagcttcaatttctct 457
                ||||| |||||||||||||||||||| ||||| || ||||||||||| |||| |||||||
Sbjct: 23978296 atctttgcaacctcaacaatgccttctctgcatgtaagctcagaaagattcagtttctct 23978355

                      
Query: 458      atctcc 463
                ||||||
Sbjct: 23978356 atctcc 23978361



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                      
Query: 595      cctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcagc 648
                |||||||||||||||||| ||||| | ||| || ||||||||||||||||||||
Sbjct: 23979569 cctgagccaccagtagagggtacataaatgtacatagctagctacacgatcagc 23979622



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                                
Query: 463      cgtttttgcagcctgtcttcctttacccagagcagcaccaaaatattt 510
                |||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct: 23979129 cgtttttgcagcctgtcttcctttccccagggcagcaccgaagtattt 23979176



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                            
Query: 305      accttctcatgctgacggttagattcatcgcacacccagcttagttccagctcaaaagat 364
                |||||||||||||| || || ||||||||||| |||||||| || ||||| |||||   |
Sbjct: 23977707 accttctcatgctggcgctttgattcatcgcatacccagctcagctccagttcaaagtct 23977766

                              
Query: 365      ttgtcttttgcttc 378
                |||||||| |||||
Sbjct: 23977767 ttgtctttagcttc 23977780



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 7        gtatccaaacagggcctaag 26
                ||||||||||||||||||||
Sbjct: 11151668 gtatccaaacagggcctaag 11151687

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  143 bits (72), Expect = 8e-31
 Identities = 84/88 (95%)
 Strand = Plus / Minus

                                                                            
Query: 512      tatgagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacctcca 571
                |||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34466005 tatgagactcctgagggttcgatcatgtagagctgtggcccatccctatcataacctcca 34465946

                                            
Query: 572      agaataactccacagccaaaaggcctga 599
                |||||||||||||| |||||||||||||
Sbjct: 34465945 agaataactccacaaccaaaaggcctga 34465918



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 52/54 (96%)
 Strand = Plus / Minus

                                                                      
Query: 595      cctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcagc 648
                |||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 34465813 cctgagccaccagtagagtgtacaaagatgaacgtagctagccacacgatcagc 34465760



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 47/48 (97%)
 Strand = Plus / Minus

                                                                
Query: 463      cgtttttgcagcctgtcttcctttacccagagcagcaccaaaatattt 510
                |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 34466262 cgtttttgcagcctgtcttcctttacccagagcagcaccaaagtattt 34466215



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                            
Query: 398      atcttggcaacctcaacaatgccttccctgcaggttagctcagaaagcttcaatttctct 457
                ||||| |||||||| ||||||||||||| |||||| ||||| ||||||||||| ||||||
Sbjct: 34467113 atctttgcaacctccacaatgccttcccggcaggtaagctcggaaagcttcaacttctct 34467054

                  
Query: 458      at 459
                ||
Sbjct: 34467053 at 34467052



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                            
Query: 228      tctcttcttagtcggcatccatctcttccaacgctgcctgtgctgctgccttggcctgct 287
                |||| ||||| || ||||||||||| || | ||||||||| |||||  ||||||||||||
Sbjct: 34468555 tctcctcttaatcagcatccatctcctcaagcgctgcctgagctgcaaccttggcctgct 34468496

                           
Query: 288      ccagaagatca 298
                ||| |||||||
Sbjct: 34468495 ccaaaagatca 34468485

---

>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0468B07
          Length = 169071

 Score =  143 bits (72), Expect = 8e-31
 Identities = 84/88 (95%)
 Strand = Plus / Minus

                                                                          
Query: 512    tatgagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacctcca 571
              |||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148349 tatgagactcctgagggttcgatcatgtagagctgtggcccatccctatcataacctcca 148290

                                          
Query: 572    agaataactccacagccaaaaggcctga 599
              |||||||||||||| |||||||||||||
Sbjct: 148289 agaataactccacaaccaaaaggcctga 148262



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 52/54 (96%)
 Strand = Plus / Minus

                                                                    
Query: 595    cctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcagc 648
              |||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 148157 cctgagccaccagtagagtgtacaaagatgaacgtagctagccacacgatcagc 148104



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 47/48 (97%)
 Strand = Plus / Minus

                                                              
Query: 463    cgtttttgcagcctgtcttcctttacccagagcagcaccaaaatattt 510
              |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 148606 cgtttttgcagcctgtcttcctttacccagagcagcaccaaagtattt 148559



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                          
Query: 398    atcttggcaacctcaacaatgccttccctgcaggttagctcagaaagcttcaatttctct 457
              ||||| |||||||| ||||||||||||| |||||| ||||| ||||||||||| ||||||
Sbjct: 149457 atctttgcaacctccacaatgccttcccggcaggtaagctcggaaagcttcaacttctct 149398

                
Query: 458    at 459
              ||
Sbjct: 149397 at 149396



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                          
Query: 228    tctcttcttagtcggcatccatctcttccaacgctgcctgtgctgctgccttggcctgct 287
              |||| ||||| || ||||||||||| || | ||||||||| |||||  ||||||||||||
Sbjct: 150899 tctcctcttaatcagcatccatctcctcaagcgctgcctgagctgcaaccttggcctgct 150840

                         
Query: 288    ccagaagatca 298
              ||| |||||||
Sbjct: 150839 ccaaaagatca 150829

---

>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0425G02
          Length = 155432

 Score =  143 bits (72), Expect = 8e-31
 Identities = 84/88 (95%)
 Strand = Plus / Minus

                                                                         
Query: 512   tatgagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacctcca 571
             |||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41724 tatgagactcctgagggttcgatcatgtagagctgtggcccatccctatcataacctcca 41665

                                         
Query: 572   agaataactccacagccaaaaggcctga 599
             |||||||||||||| |||||||||||||
Sbjct: 41664 agaataactccacaaccaaaaggcctga 41637



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 52/54 (96%)
 Strand = Plus / Minus

                                                                   
Query: 595   cctgagccaccagtagagtgtacacagatgaacgtagctagctacacgatcagc 648
             |||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 41532 cctgagccaccagtagagtgtacaaagatgaacgtagctagccacacgatcagc 41479



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 47/48 (97%)
 Strand = Plus / Minus

                                                             
Query: 463   cgtttttgcagcctgtcttcctttacccagagcagcaccaaaatattt 510
             |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 41981 cgtttttgcagcctgtcttcctttacccagagcagcaccaaagtattt 41934



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                         
Query: 398   atcttggcaacctcaacaatgccttccctgcaggttagctcagaaagcttcaatttctct 457
             ||||| |||||||| ||||||||||||| |||||| ||||| ||||||||||| ||||||
Sbjct: 42832 atctttgcaacctccacaatgccttcccggcaggtaagctcggaaagcttcaacttctct 42773

               
Query: 458   at 459
             ||
Sbjct: 42772 at 42771



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                         
Query: 228   tctcttcttagtcggcatccatctcttccaacgctgcctgtgctgctgccttggcctgct 287
             |||| ||||| || ||||||||||| || | ||||||||| |||||  ||||||||||||
Sbjct: 44274 tctcctcttaatcagcatccatctcctcaagcgctgcctgagctgcaaccttggcctgct 44215

                        
Query: 288   ccagaagatca 298
             ||| |||||||
Sbjct: 44214 ccaaaagatca 44204

---

>ref|NM_128260.3| Arabidopsis thaliana PAG1; endopeptidase/ peptidase/ threonine
           endopeptidase AT2G27020 (PAG1) mRNA, complete cds
          Length = 1024

 Score =  127 bits (64), Expect = 5e-26
 Identities = 148/176 (84%)
 Strand = Plus / Minus

                                                                       
Query: 449 aatttctctatctccgtttttgcagcctgtcttcctttacccagagcagcaccaaaatat 508
           |||||||| || |||||||| ||||| ||  ||||||| || |  || |||||||| |||
Sbjct: 654 aatttctcaatttccgttttggcagcttgctttcctttgccaatggccgcaccaaagtat 595

                                                                       
Query: 509 ttatatgagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacct 568
            ||||||| |  ||||| ||||| |||||||| |  || || ||||| ||||||||||||
Sbjct: 594 ctatatgatatgcctgatggttcaatcatgtacaattgaggtccatctctatcataacct 535

                                                                   
Query: 569 ccaagaataactccacagccaaaaggcctgagccaccagtagagtgtacacagatg 624
           ||||||||||| |||||||||||||||||||||||||| || || |||||||||||
Sbjct: 534 ccaagaataaccccacagccaaaaggcctgagccaccaatacagggtacacagatg 479

---

>emb|Y13693.1|ATY13693 Arabidopsis thaliana mRNA for proteasome subunit prc8
          Length = 958

 Score =  127 bits (64), Expect = 5e-26
 Identities = 148/176 (84%)
 Strand = Plus / Minus

                                                                       
Query: 449 aatttctctatctccgtttttgcagcctgtcttcctttacccagagcagcaccaaaatat 508
           |||||||| || |||||||| ||||| ||  ||||||| || |  || |||||||| |||
Sbjct: 579 aatttctcaatttccgttttggcagcttgctttcctttgccaatggccgcaccaaagtat 520

                                                                       
Query: 509 ttatatgagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacct 568
            ||||||| |  ||||| ||||| |||||||| |  || || ||||| ||||||||||||
Sbjct: 519 ctatatgatatgcctgatggttcaatcatgtacaattgaggtccatctctatcataacct 460

                                                                   
Query: 569 ccaagaataactccacagccaaaaggcctgagccaccagtagagtgtacacagatg 624
           ||||||||||| |||||||||||||||||||||||||| || || |||||||||||
Sbjct: 459 ccaagaataaccccacagccaaaaggcctgagccaccaatacagggtacacagatg 404

---

>gb|AY124806.1| Arabidopsis thaliana At2g27020/T20P8.7 mRNA, complete cds
          Length = 750

 Score =  127 bits (64), Expect = 5e-26
 Identities = 148/176 (84%)
 Strand = Plus / Minus

                                                                       
Query: 449 aatttctctatctccgtttttgcagcctgtcttcctttacccagagcagcaccaaaatat 508
           |||||||| || |||||||| ||||| ||  ||||||| || |  || |||||||| |||
Sbjct: 536 aatttctcaatttccgttttggcagcttgctttcctttgccaatggccgcaccaaagtat 477

                                                                       
Query: 509 ttatatgagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacct 568
            ||||||| |  ||||| ||||| |||||||| |  || || ||||| ||||||||||||
Sbjct: 476 ctatatgatatgcctgatggttcaatcatgtacaattgaggtccatctctatcataacct 417

                                                                   
Query: 569 ccaagaataactccacagccaaaaggcctgagccaccagtagagtgtacacagatg 624
           ||||||||||| |||||||||||||||||||||||||| || || |||||||||||
Sbjct: 416 ccaagaataaccccacagccaaaaggcctgagccaccaatacagggtacacagatg 361

---

>gb|AF375455.1| Arabidopsis thaliana At2g27020/T20P8.7 mRNA, complete cds
          Length = 935

 Score =  127 bits (64), Expect = 5e-26
 Identities = 148/176 (84%)
 Strand = Plus / Minus

                                                                       
Query: 449 aatttctctatctccgtttttgcagcctgtcttcctttacccagagcagcaccaaaatat 508
           |||||||| || |||||||| ||||| ||  ||||||| || |  || |||||||| |||
Sbjct: 569 aatttctcaatttccgttttggcagcttgctttcctttgccaatggccgcaccaaagtat 510

                                                                       
Query: 509 ttatatgagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacct 568
            ||||||| |  ||||| ||||| |||||||| |  || || ||||| ||||||||||||
Sbjct: 509 ctatatgatatgcctgatggttcaatcatgtacaattgaggtccatctctatcataacct 450

                                                                   
Query: 569 ccaagaataactccacagccaaaaggcctgagccaccagtagagtgtacacagatg 624
           ||||||||||| |||||||||||||||||||||||||| || || |||||||||||
Sbjct: 449 ccaagaataaccccacagccaaaaggcctgagccaccaatacagggtacacagatg 394

---

>gb|AF043528.1|AF043528 Arabidopsis thaliana 20S proteasome subunit PAG1 (PAG1) mRNA,
           complete cds
          Length = 958

 Score =  127 bits (64), Expect = 5e-26
 Identities = 148/176 (84%)
 Strand = Plus / Minus

                                                                       
Query: 449 aatttctctatctccgtttttgcagcctgtcttcctttacccagagcagcaccaaaatat 508
           |||||||| || |||||||| ||||| ||  ||||||| || |  || |||||||| |||
Sbjct: 579 aatttctcaatttccgttttggcagcttgctttcctttgccaatggccgcaccaaagtat 520

                                                                       
Query: 509 ttatatgagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacct 568
            ||||||| |  ||||| ||||| |||||||| |  || || ||||| ||||||||||||
Sbjct: 519 ctatatgatatgcctgatggttcaatcatgtacaattgaggtccatctctatcataacct 460

                                                                   
Query: 569 ccaagaataactccacagccaaaaggcctgagccaccagtagagtgtacacagatg 624
           ||||||||||| |||||||||||||||||||||||||| || || |||||||||||
Sbjct: 459 ccaagaataaccccacagccaaaaggcctgagccaccaatacagggtacacagatg 404

---

>emb|BX819273.1|CNS0A9VK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB62ZH07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 837

 Score =  119 bits (60), Expect = 1e-23
 Identities = 147/176 (83%)
 Strand = Plus / Minus

                                                                       
Query: 449 aatttctctatctccgtttttgcagcctgtcttcctttacccagagcagcaccaaaatat 508
           |||||||| || |||||||| ||||| ||  ||||||| || |  || |||||||| |||
Sbjct: 467 aatttctcaatttccgttttggcagcttgctttcctttgccaatggccgcaccaaagtat 408

                                                                       
Query: 509 ttatatgagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacct 568
            ||||| | |  ||||| ||||| |||||||| |  || || ||||| ||||||||||||
Sbjct: 407 ctatatcatatgcctgatggttcaatcatgtacaattgaggtccatctctatcataacct 348

                                                                   
Query: 569 ccaagaataactccacagccaaaaggcctgagccaccagtagagtgtacacagatg 624
           ||||||||||| |||||||||||||||||||||||||| || || |||||||||||
Sbjct: 347 ccaagaataaccccacagccaaaaggcctgagccaccaatacagggtacacagatg 292

---

>gb|AY088609.1| Arabidopsis thaliana clone 8342 mRNA, complete sequence
          Length = 1022

 Score =  119 bits (60), Expect = 1e-23
 Identities = 144/172 (83%)
 Strand = Plus / Minus

                                                                       
Query: 449 aatttctctatctccgtttttgcagcctgtcttcctttacccagagcagcaccaaaatat 508
           |||||||| || |||||||| ||||| ||  ||||||| || |  || |||||||| |||
Sbjct: 657 aatttctcaatttccgttttggcagcttgctttcctttgccaatggccgcaccaaagtat 598

                                                                       
Query: 509 ttatatgagagccctgaaggttcgatcatgtagagctgtggcccatccctatcataacct 568
            ||||||| |  ||||| ||||| |||||||| |  || || ||||| ||||||||||||
Sbjct: 597 ctatatgatatgcctgatggttcaatcatgtacaattgaggtccatctctatcataacct 538

                                                               
Query: 569 ccaagaataactccacagccaaaaggcctgagccaccagtagagtgtacaca 620
           ||||||||||| |||||||||||||||||||||||||| || || |||||||
Sbjct: 537 ccaagaataaccccacagccaaaaggcctgagccaccaatacagggtacaca 486

---

>dbj|D78173.1| Spinacia oleracea mRNA for 26S proteasome alpha subunit, complete
           cds
          Length = 1099

 Score =  103 bits (52), Expect = 7e-19
 Identities = 154/188 (81%)
 Strand = Plus / Minus

                                                                       
Query: 461 tccgtttttgcagcctgtcttcctttacccagagcagcaccaaaatatttatatgagagc 520
           |||||||| ||||||||| |||| || || | |||||| ||||||||| ||||||| |  
Sbjct: 566 tccgttttagcagcctgttttccctttccaatagcagcgccaaaatatctatatgaaatt 507

                                                                       
Query: 521 cctgaaggttcgatcatgtagagctgtggcccatccctatcataacctccaagaataact 580
           || ||||| || | ||| || | |||||| ||||| |  ||||||||||||||||| |||
Sbjct: 506 ccagaaggctcaaccatatataactgtggtccatctcggtcataacctccaagaatgact 447

                                                                       
Query: 581 ccacagccaaaaggcctgagccaccagtagagtgtacacagatgaacgtagctagctaca 640
           ||||| |||||||| ||||||||||| ||||| || || | ||| || || ||||| |||
Sbjct: 446 ccacatccaaaaggtctgagccaccaatagagggtgcataaatggacataactagcaaca 387

                   
Query: 641 cgatcagc 648
           ||||||||
Sbjct: 386 cgatcagc 379

---

>gb|BT013996.1| Lycopersicon esculentum clone 133043F, mRNA sequence
          Length = 1134

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 240/305 (78%)
 Strand = Plus / Minus

                                                                       
Query: 302 ggaaccttctcatgctgacggttagattcatcgcacacccagcttagttccagctcaaaa 361
           |||||||||| ||| || |||||||| ||||| || |||||||| | ||| || ||||| 
Sbjct: 787 ggaaccttctgatgttggcggttagactcatcacatacccagctcatttcaagttcaaat 728

                                                                       
Query: 362 gatttgtcttttgcttcatcgtgtataccataaattatcttggcaacctcaacaatgcct 421
           |  ||||||||||| ||||| ||||  || |||||||| || || ||||||| ||| |||
Sbjct: 727 gccttgtcttttgcctcatcatgtactccgtaaattatttttgctacctcaataatccct 668

                                                                       
Query: 422 tccctgcaggttagctcagaaagcttcaatttctctatctccgtttttgcagcctgtctt 481
           |  |  ||||| |  ||||| | ||| || ||||| || || ||||| ||||| || |||
Sbjct: 667 tgtcgacaggtcatttcagataactttaacttctcaatttctgttttagcagcttgcctt 608

                                                                       
Query: 482 cctttacccagagcagcaccaaaatatttatatgagagccctgaaggttcgatcatgtag 541
           || || || | ||||||||| || ||  |||| ||||  || ||||| || | || ||| 
Sbjct: 607 ccctttccgatagcagcaccgaagtacctataggagacaccagaaggctcaaccaggtat 548

                                                                       
Query: 542 agctgtggcccatccctatcataacctccaagaataactccacagccaaaaggcctgagc 601
           || || || ||||| |||||||| ||||||||||| || ||||| |||||||||||||||
Sbjct: 547 agttgaggtccatctctatcataccctccaagaatcaccccacatccaaaaggcctgagc 488

                
Query: 602 cacca 606
           |||||
Sbjct: 487 cacca 483

---

>gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P8 map B68, complete
             sequence
          Length = 99345

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                         
Query: 521   cctgaaggttcgatcatgtagagctgtggcccatccctatcataacctccaagaataact 580
             ||||| ||||| |||||||| |  || || ||||| ||||||||||||||||||||||| 
Sbjct: 28939 cctgatggttcaatcatgtacaattgaggtccatctctatcataacctccaagaataacc 28998

                              
Query: 581   ccacagccaaaaggcct 597
             |||||||||||||||||
Sbjct: 28999 ccacagccaaaaggcct 29015

---

>emb|AJ291738.1|NTA291738 Nicotiana tabacum mRNA for putative alpha7 proteasome subunit (a7
           gene)
          Length = 1047

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 263/341 (77%)
 Strand = Plus / Minus

                                                                       
Query: 302 ggaaccttctcatgctgacggttagattcatcgcacacccagcttagttccagctcaaaa 361
           |||||||||| |||||| || ||||| ||||| |||||||| ||   |||||| ||||| 
Sbjct: 773 ggaaccttctgatgctgtcgattagactcatcacacacccaactcgtttccagttcaaac 714

                                                                       
Query: 362 gatttgtcttttgcttcatcgtgtataccataaattatcttggcaacctcaacaatgcct 421
           |  ||||| ||||| ||||| ||||  || || ||||| ||||| |||||||  |  |||
Sbjct: 713 gccttgtcctttgcctcatcatgtactccgtatattattttggctacctcaattacccct 654

                                                                       
Query: 422 tccctgcaggttagctcagaaagcttcaatttctctatctccgtttttgcagcctgtctt 481
           | ||  || || |  ||||| |||||||| || || || || || || ||||| ||||| 
Sbjct: 653 tgccgacacgtcatttcagagagcttcaacttttcaatttctgtcttagcagcttgtctg 594

                                                                       
Query: 482 cctttacccagagcagcaccaaaatatttatatgagagccctgaaggttcgatcatgtag 541
           || || || | |||||||||||| ||  |||| ||||  || || || || | |||||| 
Sbjct: 593 cccttcccaatagcagcaccaaagtacctataggagacaccagacggctcaaccatgtat 534

                                                                       
Query: 542 agctgtggcccatccctatcataacctccaagaataactccacagccaaaaggcctgagc 601
           || || || ||||| |||||||| ||||| || || || ||||| || ||||||||||||
Sbjct: 533 agttgaggtccatctctatcatagcctccgaggatcaccccacatccgaaaggcctgagc 474

                                                    
Query: 602 caccagtagagtgtacacagatgaacgtagctagctacacg 642
           ||||| || ||||| || | |||||| || ||||| |||||
Sbjct: 473 caccaataaagtgtgcataaatgaacataactagcaacacg 433

---

>dbj|AB210519.1| Ciona intestinalis mRNA for Janus kinase, complete cds, clone:
            cigd046k12
          Length = 4399

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 356  tcaaaagatttgtcttttgctt 377
            ||||||||||||||||||||||
Sbjct: 1565 tcaaaagatttgtcttttgctt 1544

---

>gb|AC154801.2| Mus musculus BAC clone RP24-500P8 from chromosome 16, complete sequence
          Length = 157077

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 499   accaaaatatttatatgagagccctg 524
             ||||||||||| ||||||||||||||
Sbjct: 58767 accaaaatattcatatgagagccctg 58792

---

>gb|AC160643.2| Gallus gallus BAC clone CH261-123L21 from chromosome unknown, complete
              sequence
          Length = 267345

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 207    aatgggaagcagagctcatcatctct 232
              ||||||||||||||||| ||||||||
Sbjct: 223793 aatgggaagcagagctcttcatctct 223768

---

>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 270     ctgctgccttggcctgctccag 291
               ||||||||||||||||||||||
Sbjct: 1904782 ctgctgccttggcctgctccag 1904761

---

>gb|AC136969.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0048P17, complete sequence
          Length = 149883

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 258   acgctgcctgtgctgctgcct 278
             |||||||||||||||||||||
Sbjct: 53850 acgctgcctgtgctgctgcct 53830

---

>gb|AC168148.15| Medicago truncatula clone mth2-80b11, complete sequence
          Length = 111889

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 436    ctcagaaagcttcaatttctc 456
              |||||||||||||||||||||
Sbjct: 108662 ctcagaaagcttcaatttctc 108642

---

>gb|AC142394.19| Medicago truncatula clone mth2-11d4, complete sequence
          Length = 111262

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 8     tatccaaacagggcctaagtt 28
             |||||||||||||||||||||
Sbjct: 94224 tatccaaacagggcctaagtt 94244

---

>gb|AC152407.19| Medicago truncatula clone mth2-77l23, complete sequence
          Length = 113470

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 436    ctcagaaagcttcaatttctc 456
              |||||||||||||||||||||
Sbjct: 102100 ctcagaaagcttcaatttctc 102120

---

>gb|AC147435.22| Medicago truncatula clone mth2-19c18, complete sequence
          Length = 137284

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 8     tatccaaacagggcctaagtt 28
             |||||||||||||||||||||
Sbjct: 84560 tatccaaacagggcctaagtt 84580

---

>gb|AF055983.1| Mus musculus proteasome alpha7/C8 subunit mRNA, complete cds
          Length = 938

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 338 acccagcttagttccagctcaaaagatttgtcttttgcttcatcgtgta 386
           |||||||| || ||||| ||||||| ||| |||||  ||||||||||||
Sbjct: 692 acccagctgagctccagttcaaaagctttatctttaacttcatcgtgta 644

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 258    acgctgcctgtgctgctgcct 278
              |||||||||||||||||||||
Sbjct: 944343 acgctgcctgtgctgctgcct 944323

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 258    acgctgcctgtgctgctgcct 278
              |||||||||||||||||||||
Sbjct: 886974 acgctgcctgtgctgctgcct 886954

---

>gb|AC147481.3| Medicago truncatula chromosome 2 BAC clone mth2-138b18, complete
             sequence
          Length = 128810

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 9     atccaaacagggcctaagttt 29
             |||||||||||||||||||||
Sbjct: 19262 atccaaacagggcctaagttt 19242

---

>gb|BC091743.1| Mus musculus proteasome (prosome, macropain) subunit, alpha type 3,
           mRNA (cDNA clone MGC:103159 IMAGE:5030475), complete cds
          Length = 909

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 338 acccagcttagttccagctcaaaagatttgtcttttgcttcatcgtgta 386
           |||||||| || ||||| ||||||| ||| |||||  ||||||||||||
Sbjct: 664 acccagctgagctccagttcaaaagctttatctttaacttcatcgtgta 616

---

>dbj|AK104583.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-F04, full
           insert sequence
          Length = 1091

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 258 acgctgcctgtgctgctgcct 278
           |||||||||||||||||||||
Sbjct: 201 acgctgcctgtgctgctgcct 221

---

>dbj|AK101778.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064O15, full
           insert sequence
          Length = 1201

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 258 acgctgcctgtgctgctgcct 278
           |||||||||||||||||||||
Sbjct: 301 acgctgcctgtgctgctgcct 321

---

>dbj|AK060359.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-H05, full
           insert sequence
          Length = 1334

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 258 acgctgcctgtgctgctgcct 278
           |||||||||||||||||||||
Sbjct: 298 acgctgcctgtgctgctgcct 318

---

>dbj|AK059980.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E05, full
           insert sequence
          Length = 1106

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 258 acgctgcctgtgctgctgcct 278
           |||||||||||||||||||||
Sbjct: 204 acgctgcctgtgctgctgcct 224

---

>gb|AF060089.1|AF060089 Mus musculus proteasome subunit C8 (Psma3) mRNA, complete cds
          Length = 860

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 338 acccagcttagttccagctcaaaagatttgtcttttgcttcatcgtgta 386
           |||||||| || ||||| ||||||| ||| |||||  ||||||||||||
Sbjct: 660 acccagctgagctccagttcaaaagctttatctttaacttcatcgtgta 612

---

>emb|AL929191.9| Mouse DNA sequence from clone RP23-330G15 on chromosome 2, complete
             sequence
          Length = 192196

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 147   ttttttgcactgaaaacgaac 167
             |||||||||||||||||||||
Sbjct: 49587 ttttttgcactgaaaacgaac 49567

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 258    acgctgcctgtgctgctgcct 278
              |||||||||||||||||||||
Sbjct: 886280 acgctgcctgtgctgctgcct 886260

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 258    acgctgcctgtgctgctgcct 278
              |||||||||||||||||||||
Sbjct: 944343 acgctgcctgtgctgctgcct 944323

---

>emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC OJ1126_F08 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 134217

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 258   acgctgcctgtgctgctgcct 278
             |||||||||||||||||||||
Sbjct: 81928 acgctgcctgtgctgctgcct 81908

---

>gb|AC154374.1| Mus musculus BAC clone RP23-81F24 from 9, complete sequence
          Length = 169272

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 275   gccttggcctgctccagaagatcat 299
             ||||||||||| |||||||||||||
Sbjct: 71028 gccttggcctgatccagaagatcat 71004

---

>gb|AC102303.10| Mus musculus chromosome 1, clone RP24-403I11, complete sequence
          Length = 162813

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 196   acatggaagtaaatgggaag 215
             ||||||||||||||||||||
Sbjct: 21522 acatggaagtaaatgggaag 21541

---

>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 441    aaagcttcaatttctctatc 460
              ||||||||||||||||||||
Sbjct: 517768 aaagcttcaatttctctatc 517787

---

>gb|AC157933.4| Mus musculus chromosome 5, clone RP24-189N4, complete sequence
          Length = 185286

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    gtatctgttacgccacacat 199
              ||||||||||||||||||||
Sbjct: 106298 gtatctgttacgccacacat 106279

---

>gb|BC097109.1| Danio rerio zgc:114044, mRNA (cDNA clone MGC:114044 IMAGE:7416126),
           complete cds
          Length = 996

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 524 gaaggttcgatcatgtagagctgtggcccatc 555
           ||||| |||| ||||||||||||||| |||||
Sbjct: 562 gaagggtcgaccatgtagagctgtgggccatc 531

---

>gb|AY619371.1| Daphnia pulicaria clone WFms0000362 microsatellite marker Dp349
           sequence
          Length = 226

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 257 aacgctgcctgtgctgctgc 276
           ||||||||||||||||||||
Sbjct: 163 aacgctgcctgtgctgctgc 182

---

>gb|AC137610.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OSJNBa0018H09, complete sequence
          Length = 155329

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     gtatccaaacagggcctaag 26
             ||||||||||||||||||||
Sbjct: 53922 gtatccaaacagggcctaag 53941

---

>ref|NM_001030187.1| Danio rerio zgc:114044 (zgc:114044), mRNA
          Length = 996

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 524 gaaggttcgatcatgtagagctgtggcccatc 555
           ||||| |||| ||||||||||||||| |||||
Sbjct: 562 gaagggtcgaccatgtagagctgtgggccatc 531

---

>ref|XM_753392.1| Ustilago maydis 521 hypothetical protein (UM02338.1) partial mRNA
          Length = 927

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 cctgtgctgctgccttggcc 283
           ||||||||||||||||||||
Sbjct: 250 cctgtgctgctgccttggcc 231

---

>gb|AC117213.3| Mus musculus BAC clone RP23-305J6 from 6, complete sequence
          Length = 186160

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   tggcaacctcaacaatgcct 421
             ||||||||||||||||||||
Sbjct: 74826 tggcaacctcaacaatgcct 74807

---

>gb|BC041518.1| Xenopus laevis proteasome (prosome, macropain) subunit, alpha type,
           3, mRNA (cDNA clone MGC:53724 IMAGE:4930219), complete
           cds
          Length = 974

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 338 acccagcttagttccagctcaaaagatttgtcttttgcttcatc 381
           ||||||||||||||||| ||||| || || |||||  |||||||
Sbjct: 714 acccagcttagttccagttcaaatgacttatctttcacttcatc 671

---

>gb|AC098727.3| Mus musculus BAC clone RP23-3H16 from 4, complete sequence
          Length = 231302

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 208   atgggaagcagagctcatcatctc 231
             |||||||||||| |||||||||||
Sbjct: 66891 atgggaagcagacctcatcatctc 66868

---

>emb|CR936847.6| Mouse DNA sequence from clone DN-393H17 on chromosome 11, complete
             sequence
          Length = 170807

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 464   gtttttgcagcctgtcttcc 483
             ||||||||||||||||||||
Sbjct: 50234 gtttttgcagcctgtcttcc 50253

---

>emb|AL596136.5| Mouse DNA sequence from clone RP23-83I13 on chromosome 11 Contains the
              Rabep1 gene for rabaptin, RAB GTPase binding effector
              protein 1, a ribosomal protein 23a (Rpl23a) pseudogene, a
              ribosomal protein 23A (Rpl23a) pseudogene, the Nup88 gene
              for nucleoporin 88, four novel genes, the C1qbp gene for
              complement component 1 q subcomponent binding protein, the
              Dhx33 gene for DEAH (Asp-Glu-Ala-His) box polypeptide 33, a
               novel pseudogene, a CARD domain pseudogene and six CpG
              islands, complete sequence
          Length = 254116

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 464    gtttttgcagcctgtcttcc 483
              ||||||||||||||||||||
Sbjct: 162324 gtttttgcagcctgtcttcc 162343

---

>emb|AL663103.4| Mouse DNA sequence from clone RP23-267D13 on chromosome 11, complete
              sequence
          Length = 238478

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 475    ctgtcttcctttacccagag 494
              ||||||||||||||||||||
Sbjct: 231576 ctgtcttcctttacccagag 231595

---

>emb|AJ719536.1| Gallus gallus mRNA for hypothetical protein, clone 3c18
          Length = 1688

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 267  gtgctgctgccttggcctgctcca 290
            ||||||||||||||||| ||||||
Sbjct: 1075 gtgctgctgccttggccagctcca 1098

---

>emb|AJ866853.1| Hordeum vulgare subsp. vulgare transposon MITE Jura, clone
          SQ005T7A08
          Length = 696

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 6  tgtatccaaacagggcctaa 25
          ||||||||||||||||||||
Sbjct: 20 tgtatccaaacagggcctaa 1

---

>emb|AJ866913.1| Hordeum vulgare subsp. vulgare transposon MITE Jura, clone
           SQ005T7G04
          Length = 694

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   tgtatccaaacagggcctaa 25
           ||||||||||||||||||||
Sbjct: 675 tgtatccaaacagggcctaa 694

---

>emb|AJ866910.1| Hordeum vulgare subsp. vulgare transposon MITE Jura, clone
          SQ005T7G09
          Length = 673

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 6  tgtatccaaacagggcctaa 25
          ||||||||||||||||||||
Sbjct: 20 tgtatccaaacagggcctaa 1

---

>emb|AJ866883.1| Hordeum vulgare subsp. vulgare transposon MITE Jura, clone
          SQ005T7G01
          Length = 697

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 6  tgtatccaaacagggcctaa 25
          ||||||||||||||||||||
Sbjct: 20 tgtatccaaacagggcctaa 1

---

>emb|AJ866882.1| Hordeum vulgare subsp. vulgare transposon MITE Jura, clone
          SQ003T7E12
          Length = 695

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 6  tgtatccaaacagggcctaa 25
          ||||||||||||||||||||
Sbjct: 20 tgtatccaaacagggcctaa 1

---

>gb|AC008813.6| Homo sapiens chromosome 19 clone CTD-2102P23, complete sequence
          Length = 162914

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 473    gcctgtcttcctttacccagagca 496
              ||||||||||||| ||||||||||
Sbjct: 136352 gcctgtcttccttcacccagagca 136375

---

>gb|AC138449.10| Medicago truncatula clone mth2-14o23, complete sequence
          Length = 30085

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     tatccaaacagggcctaagt 27
             ||||||||||||||||||||
Sbjct: 26707 tatccaaacagggcctaagt 26726

---

>gb|AC079460.19| Homo sapiens 12 BAC RP11-297L6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 175994

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 411    caacaatgccttccctgcag 430
              ||||||||||||||||||||
Sbjct: 147594 caacaatgccttccctgcag 147613

---

>gb|AC113429.2| Homo sapiens chromosome 5 clone RP11-775H7, complete sequence
          Length = 10528

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 202  aagtaaatgggaagcagagc 221
            ||||||||||||||||||||
Sbjct: 3908 aagtaaatgggaagcagagc 3927

---

>gb|AC157786.7| Mus musculus chromosome 1, clone RP23-280O23, complete sequence
          Length = 205264

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 196    acatggaagtaaatgggaag 215
              ||||||||||||||||||||
Sbjct: 101589 acatggaagtaaatgggaag 101570

---

>gb|AC164093.2| Mus musculus BAC clone RP23-131O16 from chromosome 16, complete
           sequence
          Length = 229443

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 570 caagaataactccacagcca 589
           ||||||||||||||||||||
Sbjct: 872 caagaataactccacagcca 891

---

>dbj|AK084370.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched
            library, clone:D230033F14 product:unclassifiable, full
            insert sequence
          Length = 3251

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 402  tggcaacctcaacaatgcct 421
            ||||||||||||||||||||
Sbjct: 2798 tggcaacctcaacaatgcct 2779

---

>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 587     ccaaaaggcctgagccacca 606
               ||||||||||||||||||||
Sbjct: 1965037 ccaaaaggcctgagccacca 1965056

---

>gb|AC007248.4| Homo sapiens BAC clone RP11-315O22 from 2, complete sequence
          Length = 201535

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 195    cacatggaagtaaatgggaa 214
              ||||||||||||||||||||
Sbjct: 189740 cacatggaagtaaatgggaa 189759

---

>gb|AF272705.1|F4I4 Arabidopsis thaliana BAC F4I4
          Length = 145744

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 553   atccctatcataacctccaa 572
             ||||||||||||||||||||
Sbjct: 43074 atccctatcataacctccaa 43055

---

>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 268     tgctgctgccttggcctgct 287
               ||||||||||||||||||||
Sbjct: 1594436 tgctgctgccttggcctgct 1594455

---

>emb|CT954231.1| Medicago truncatula chromosome 5 clone mth2-166e2, COMPLETE SEQUENCE
          Length = 122895

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     tatccaaacagggcctaagt 27
             ||||||||||||||||||||
Sbjct: 72028 tatccaaacagggcctaagt 72047

---

>emb|AL691475.18| Mouse DNA sequence from clone RP23-264P11 on chromosome 4 Contains part
              of the Astn2 gene for astrotactin 2 and a CpG island,
              complete sequence
          Length = 174567

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 208    atgggaagcagagctcatcatctc 231
              |||||||||||| |||||||||||
Sbjct: 105513 atgggaagcagacctcatcatctc 105490

---

>emb|CT010583.8| Mouse DNA sequence from clone RP23-203B24 on chromosome 16, complete
              sequence
          Length = 234878

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 570    caagaataactccacagcca 589
              ||||||||||||||||||||
Sbjct: 190668 caagaataactccacagcca 190687

---

>gb|M98497.1|CHKRHOPR Chicken rhodopsin gene, promoter region
          Length = 1925

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 ttccctgcaggttagctcag 440
           ||||||||||||||||||||
Sbjct: 268 ttccctgcaggttagctcag 249


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,262,500
Number of Sequences: 3902068
Number of extensions: 6262500
Number of successful extensions: 121043
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 120466
Number of HSP's gapped (non-prelim): 569
length of query: 648
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 625
effective length of database: 17,143,297,704
effective search space: 10714561065000
effective search space used: 10714561065000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---