ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags27i09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1SRPR_DROME (Q9U5L1) Signal recognition particle receptor alpha s... 127 3e-32
2SRPR_HUMAN (P08240) Signal recognition particle receptor alpha s... 126 3e-31
3SRPR_CANFA (P06625) Signal recognition particle receptor alpha s... 126 3e-31
4SRPR_MOUSE (Q9DBG7) Signal recognition particle receptor alpha s... 126 3e-31
5SRPR_YEAST (P32916) Signal recognition particle receptor alpha s... 77 4e-14
6Y291_METJA (Q57739) Probable signal recognition particle protein... 67 4e-12
7SRP54_HELPJ (Q9ZK62) Signal recognition particle protein (Fifty-... 58 2e-08
8SRP54_HELPY (P56005) Signal recognition particle protein (Fifty-... 57 3e-08
9SRP54_BUCAI (P57473) Signal recognition particle protein (Fifty-... 54 4e-07
10SRP54_RICCN (Q92J55) Signal recognition particle protein (Fifty-... 53 6e-07
11SRP54_RICPR (Q9ZDZ0) Signal recognition particle protein (Fifty-... 50 4e-06
12SRP54_STRMU (Q54431) Signal recognition particle protein (Fifty-... 50 4e-06
13SRP54_METKA (Q8TUY9) Signal recognition 54 kDa protein (SRP54) 49 7e-06
14SRP54_ECOLI (P0AGD7) Signal recognition particle protein (Fifty-... 49 1e-05
15SRP54_ECOL6 (P0AGD8) Signal recognition particle protein (Fifty-... 49 1e-05
16SRP54_ECO57 (P0AGD9) Signal recognition particle protein (Fifty-... 49 1e-05
17SRP54_BUCAP (Q8K9F7) Signal recognition particle protein (Fifty-... 48 2e-05
18DOCK_SULAC (P27414) Probable signal recognition particle protein... 46 6e-05
19SR543_ARATH (P49967) Signal recognition particle 54 kDa protein ... 46 8e-05
20SRP54_HAEIN (P44518) Signal recognition particle protein (Fifty-... 46 8e-05
21SRP54_BUCBP (Q89AE4) Signal recognition particle protein (Fifty-... 46 8e-05
22SR542_LYCES (P49972) Signal recognition particle 54 kDa protein ... 45 1e-04
23SR541_LYCES (P49971) Signal recognition particle 54 kDa protein ... 45 1e-04
24SRP54_SYNP7 (Q55311) Signal sequence-binding protein 44 2e-04
25SR543_HORVU (P49970) Signal recognition particle 54 kDa protein ... 44 3e-04
26SR542_HORVU (P49969) Signal recognition particle 54 kDa protein ... 43 5e-04
27SR541_HORVU (P49968) Signal recognition particle 54 kDa protein ... 43 5e-04
28SRP54_SYNY3 (P74214) Signal recognition particle protein (Fifty-... 43 5e-04
29SRP54_BACSU (P37105) Signal recognition particle protein (Fifty-... 43 7e-04
30SRP54_AQUAE (O67615) Signal recognition particle protein (Fifty-... 42 9e-04
31SRP54_SULSO (Q97ZE7) Signal recognition 54 kDa protein (SRP54) 42 9e-04
32SR54C_ARATH (P37107) Signal recognition particle 54 kDa protein,... 42 9e-04
33SR541_ARATH (P37106) Signal recognition particle 54 kDa protein ... 42 0.001
34SRP54_PYRHO (O59307) Signal recognition 54 kDa protein (SRP54) 42 0.001
35SRP54_PYRAB (Q9V1E8) Signal recognition 54 kDa protein (SRP54) 42 0.001
36SRP54_PYRKO (Q5JJC8) Signal recognition 54 kDa protein (SRP54) 42 0.001
37SRP54_ACIAM (P70722) Signal recognition 54 kDa protein (SRP54) (... 42 0.001
38SR542_ARATH (P49966) Signal recognition particle 54 kDa protein ... 41 0.002
39SRP54_ARCFU (O29633) Signal recognition 54 kDa protein (SRP54) 41 0.003
40SRP54_MYCTU (P66844) Signal recognition particle protein (Fifty-... 40 0.004
41SRP54_MYCBO (P66845) Signal recognition particle protein (Fifty-... 40 0.004
42SRP54_ENTHI (O15821) Signal recognition particle 54 kDa protein ... 40 0.006
43SRP54_PYRFU (Q8U070) Signal recognition 54 kDa protein (SRP54) 40 0.006
44SRP54_SULTO (Q971S9) Signal recognition 54 kDa protein (SRP54) 40 0.006
45SRP54_METMA (Q8PXF3) Signal recognition 54 kDa protein (SRP54) 39 0.007
46SRP54_METAC (Q8THD0) Signal recognition 54 kDa protein (SRP54) 39 0.007
47SRP54_MYCLE (O33013) Signal recognition particle protein (Fifty-... 39 0.010
48SRP54_SULAC (O07853) Signal recognition 54 kDa protein (SRP54) 39 0.012
49SRP54_GEOCY (Q8MZJ6) Signal recognition particle 54 kDa protein ... 38 0.016
50SRP54_THEAQ (O07347) Signal recognition particle protein (Fifty-... 38 0.016
51SRP54_SCHPO (P21565) Signal recognition particle 54 kDa protein ... 38 0.016
52SRP54_METJA (Q57565) Signal recognition 54 kDa protein (SRP54) 37 0.036
53SRP54_THEAC (Q9HKT0) Signal recognition 54 kDa protein (SRP54) 37 0.047
54FTSY_SYNY3 (P73930) Cell division protein ftsY homolog 36 0.081
55FTSY_NEIMC (O30391) Cell division protein ftsY homolog 35 0.14
56FTSY_NEIMB (P57011) Cell division protein ftsY homolog 35 0.14
57FTSY_NEIMA (P57010) Cell division protein ftsY homolog 35 0.14
58SRP54_RAT (Q6AYB5) Signal recognition particle 54 kDa protein (S... 35 0.14
59SRP54_PONPY (Q5R4R6) Signal recognition particle 54 kDa protein ... 35 0.14
60SRP54_MOUSE (P14576) Signal recognition particle 54 kDa protein ... 35 0.14
61SRP54_MACFA (Q4R965) Signal recognition particle 54 kDa protein ... 35 0.14
62SRP54_HUMAN (P61011) Signal recognition particle 54 kDa protein ... 35 0.14
63SRP54_CANFA (P61010) Signal recognition particle 54 kDa protein ... 35 0.14
64SRP54_METTH (O27376) Signal recognition 54 kDa protein (SRP54) 35 0.14
65FTSY_HAEIN (P44870) Cell division protein ftsY homolog 35 0.18
66FTSY_NEIGO (P14929) Cell division protein ftsY homolog 35 0.18
67FTSY_RICPR (O05948) Cell division protein ftsY homolog 34 0.23
68SRP54_THEVO (Q979Y8) Signal recognition 54 kDa protein (SRP54) 33 0.52
69FTSY_ECOLI (P10121) Cell division protein ftsY 33 0.68
70RMS1_YEAST (Q12504) Putative transcription regulator RMS1 32 1.5
71ADA1D_PIG (Q9TTM9) Alpha-1D adrenergic receptor (Alpha 1D-adreno... 29 7.6
72FTSY_BUCAP (Q8KA77) Cell division protein ftsY homolog 29 7.6
73PPAC_STRMU (O68579) Probable manganese-dependent inorganic pyrop... 29 9.9 
>SRPR_DROME (Q9U5L1) Signal recognition particle receptor alpha subunit homolog|
           (SR-alpha) (Docking protein alpha) (DP-alpha)
           (GTP-binding protein)
          Length = 614

 Score =  127 bits (319), Expect(2) = 3e-32
 Identities = 61/90 (67%), Positives = 75/90 (83%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           LFVGEALVGN+AVDQL KFNQ LAD S+     +IDGI+LTKFDTIDDKVGAA+SM YI+
Sbjct: 525 LFVGEALVGNEAVDQLVKFNQSLADYSSNENPHIIDGIVLTKFDTIDDKVGAAISMTYIT 584

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLLK 227
           G P++FVG GQ+Y DLK +NV ++V +L+K
Sbjct: 585 GQPIVFVGTGQTYADLKAINVNAVVNSLMK 614



 Score = 30.4 bits (67), Expect(2) = 3e-32
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -1

Query: 545 MRALSKLINLNKPDLVFICGRGI 477
           MR+LSKLI +N PDLV   G  +
Sbjct: 509 MRSLSKLIKVNNPDLVLFVGEAL 531
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>SRPR_HUMAN (P08240) Signal recognition particle receptor alpha subunit|
           (SR-alpha) (Docking protein alpha) (DP-alpha)
          Length = 638

 Score =  126 bits (317), Expect(2) = 3e-31
 Identities = 62/90 (68%), Positives = 74/90 (82%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           LFVGEALVGN+AVDQL KFN+ LAD S   T RLIDGI+LTKFDTIDDKVGAA+SM YI+
Sbjct: 548 LFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYIT 607

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLLK 227
             P++FVG GQ+Y DL+ LN K++V  L+K
Sbjct: 608 SKPIVFVGTGQTYCDLRSLNAKAVVAALMK 637



 Score = 27.7 bits (60), Expect(2) = 3e-31
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 545 MRALSKLINLNKPDLVFICGRGI 477
           M AL+KLI +N PDLV   G  +
Sbjct: 532 MTALAKLITVNTPDLVLFVGEAL 554
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>SRPR_CANFA (P06625) Signal recognition particle receptor alpha subunit|
           (SR-alpha) (Docking protein alpha) (DP-alpha)
          Length = 638

 Score =  126 bits (317), Expect(2) = 3e-31
 Identities = 62/90 (68%), Positives = 74/90 (82%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           LFVGEALVGN+AVDQL KFN+ LAD S   T RLIDGI+LTKFDTIDDKVGAA+SM YI+
Sbjct: 548 LFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYIT 607

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLLK 227
             P++FVG GQ+Y DL+ LN K++V  L+K
Sbjct: 608 SKPIVFVGTGQTYCDLRSLNAKAVVAALMK 637



 Score = 27.7 bits (60), Expect(2) = 3e-31
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 545 MRALSKLINLNKPDLVFICGRGI 477
           M AL+KLI +N PDLV   G  +
Sbjct: 532 MTALAKLITVNTPDLVLFVGEAL 554
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>SRPR_MOUSE (Q9DBG7) Signal recognition particle receptor alpha subunit|
           (SR-alpha) (Docking protein alpha) (DP-alpha)
          Length = 636

 Score =  126 bits (317), Expect(2) = 3e-31
 Identities = 62/90 (68%), Positives = 74/90 (82%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           LFVGEALVGN+AVDQL KFN+ LAD S   T RLIDGI+LTKFDTIDDKVGAA+SM YI+
Sbjct: 546 LFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYIT 605

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLLK 227
             P++FVG GQ+Y DL+ LN K++V  L+K
Sbjct: 606 SKPIVFVGTGQTYCDLRSLNAKAVVAALMK 635



 Score = 27.7 bits (60), Expect(2) = 3e-31
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 545 MRALSKLINLNKPDLVFICGRGI 477
           M AL+KLI +N PDLV   G  +
Sbjct: 530 MTALAKLITVNTPDLVLFVGEAL 552
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>SRPR_YEAST (P32916) Signal recognition particle receptor alpha subunit homolog|
           (SR-alpha) (Docking protein alpha) (DP-alpha)
          Length = 621

 Score = 76.6 bits (187), Expect = 4e-14
 Identities = 38/89 (42%), Positives = 56/89 (62%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           + VGEALVG D+V Q   FN            R +D  +++K DT+ + +G  ++MVY +
Sbjct: 538 IMVGEALVGTDSVQQAKNFNDAFGK------GRNLDFFIISKCDTVGEMLGTMVNMVYAT 591

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
           G P++FVG GQ+YTDL+ L+VK  V TL+
Sbjct: 592 GIPILFVGVGQTYTDLRTLSVKWAVNTLM 620
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>Y291_METJA (Q57739) Probable signal recognition particle protein MJ0291|
          Length = 409

 Score = 67.4 bits (163), Expect(2) = 4e-12
 Identities = 39/88 (44%), Positives = 54/88 (61%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           +FVG+AL GNDAV Q  +FN+ +           IDGI+LTK D  D K GAALS+ Y  
Sbjct: 319 IFVGDALTGNDAVYQAEEFNRAVN----------IDGIILTKVDA-DAKGGAALSIGYAI 367

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTL 233
           G P++++G GQ Y DL + +   +V+ L
Sbjct: 368 GKPILYLGVGQRYQDLIEFDADWMVRKL 395



 Score = 22.7 bits (47), Expect(2) = 4e-12
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 545 MRALSKLINLNKPDLVFICG 486
           M  + K++ + KPDLV   G
Sbjct: 303 MEEIKKVVRVTKPDLVIFVG 322
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>SRP54_HELPJ (Q9ZK62) Signal recognition particle protein (Fifty-four homolog)|
          Length = 448

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 39/119 (32%), Positives = 61/119 (51%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           L+V +AL G D V   N FN+++           + G++L+KFD+ D K G AL + Y  
Sbjct: 210 LYVADALSGQDGVKSANTFNEEIG----------VSGVVLSKFDS-DSKGGIALGITYQL 258

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLLK*NGSSTCRAPICAAYQRVSVISPNIPRDI 140
           G P+ F+G G+   DL     + IV  L+   G+      I  A +  SV++PN  +D+
Sbjct: 259 GLPLRFIGSGEKIPDLDVFMPERIVGRLM---GAGDI---ISLAEKTASVLNPNEAKDL 311
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>SRP54_HELPY (P56005) Signal recognition particle protein (Fifty-four homolog)|
          Length = 448

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 38/119 (31%), Positives = 61/119 (51%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           L+V +AL G D V   N FN+++           + G++L+KFD+ D K G AL + Y  
Sbjct: 210 LYVADALSGQDGVKSANTFNEEIG----------VSGVVLSKFDS-DSKGGIALGITYQL 258

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLLK*NGSSTCRAPICAAYQRVSVISPNIPRDI 140
           G P+ F+G G+   DL     + IV  L+   G+      +  A +  SV++PN  +D+
Sbjct: 259 GLPLRFIGSGEKIPDLDVFVPERIVGRLM---GAGDI---VSLAEKTASVLNPNEAKDL 311
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>SRP54_BUCAI (P57473) Signal recognition particle protein (Fifty-four homolog)|
          Length = 451

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 31/89 (34%), Positives = 48/89 (53%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           L + ++++G DA++    FN  L          LI GI+LTK D  D + G ALSM YI+
Sbjct: 218 LLIVDSMMGQDAINMAKIFNNDL----------LISGIILTKTDG-DSRSGIALSMRYIT 266

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
           G P+ F+G G+    L+  + + I   +L
Sbjct: 267 GKPIKFIGTGEKIISLEPFHPERIADRIL 295
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>SRP54_RICCN (Q92J55) Signal recognition particle protein (Fifty-four homolog)|
          Length = 449

 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 30/89 (33%), Positives = 51/89 (57%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           L V +++ G DAV   + FN+KLA          I G++L++ D  D K GAALS+ YI+
Sbjct: 219 LLVIDSMTGQDAVVTASSFNEKLA----------ISGLILSRIDG-DSKGGAALSVKYIT 267

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
             P+ F+  G++  DL++ + + +   +L
Sbjct: 268 KKPIKFLSSGENLIDLEEFDAERLASRIL 296
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>SRP54_RICPR (Q9ZDZ0) Signal recognition particle protein (Fifty-four homolog)|
          Length = 449

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 29/89 (32%), Positives = 48/89 (53%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           L V +++ G DAV     F++KL           I G++L++ D  D K GAALS+ Y +
Sbjct: 219 LLVIDSMTGQDAVITAKTFSEKLE----------ISGLILSRIDG-DTKGGAALSVKYFT 267

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
             P+ F+  G+  TDL++ N + +   +L
Sbjct: 268 QKPIKFLSSGEKLTDLEEFNAERLASRIL 296
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>SRP54_STRMU (Q54431) Signal recognition particle protein (Fifty-four homolog)|
          Length = 516

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 27/77 (35%), Positives = 45/77 (58%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           L V ++++G +A +   +FNQ+L           + G++LTK D  D + GAALS+  I+
Sbjct: 219 LLVVDSMIGQEAANVAREFNQQLE----------VTGVILTKIDG-DTRGGAALSVRQIT 267

Query: 316 GSPVMFVGCGQSYTDLK 266
           G P+ F G G+  TD++
Sbjct: 268 GKPIKFTGTGEKITDIE 284
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>SRP54_METKA (Q8TUY9) Signal recognition 54 kDa protein (SRP54)|
          Length = 447

 Score = 49.3 bits (116), Expect = 7e-06
 Identities = 32/89 (35%), Positives = 47/89 (52%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           L V +A VG  A D    F++ +           + G+++TK DT   K G ALS V  +
Sbjct: 216 LLVLDATVGQKAGDHAEAFHEAVQ----------LTGVVITKLDTAA-KGGGALSAVART 264

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
           G+P+ FVG G+   DL++ N +S V  LL
Sbjct: 265 GAPIKFVGTGERVDDLEEFNPRSFVARLL 293
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>SRP54_ECOLI (P0AGD7) Signal recognition particle protein (Fifty-four homolog)|
           (p48)
          Length = 453

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 30/89 (33%), Positives = 47/89 (52%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           LFV +A+ G DA +    FN+ L           + G++LTK D  D + GAALS+ +I+
Sbjct: 218 LFVVDAMTGQDAANTAKAFNEALP----------LTGVVLTKVDG-DARGGAALSIRHIT 266

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
           G P+ F+G G+    L+  +   I   +L
Sbjct: 267 GKPIKFLGVGEKTEALEPFHPDRIASRIL 295
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>SRP54_ECOL6 (P0AGD8) Signal recognition particle protein (Fifty-four homolog)|
          Length = 453

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 30/89 (33%), Positives = 47/89 (52%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           LFV +A+ G DA +    FN+ L           + G++LTK D  D + GAALS+ +I+
Sbjct: 218 LFVVDAMTGQDAANTAKAFNEALP----------LTGVVLTKVDG-DARGGAALSIRHIT 266

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
           G P+ F+G G+    L+  +   I   +L
Sbjct: 267 GKPIKFLGVGEKTEALEPFHPDRIASRIL 295
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>SRP54_ECO57 (P0AGD9) Signal recognition particle protein (Fifty-four homolog)|
          Length = 453

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 30/89 (33%), Positives = 47/89 (52%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           LFV +A+ G DA +    FN+ L           + G++LTK D  D + GAALS+ +I+
Sbjct: 218 LFVVDAMTGQDAANTAKAFNEALP----------LTGVVLTKVDG-DARGGAALSIRHIT 266

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
           G P+ F+G G+    L+  +   I   +L
Sbjct: 267 GKPIKFLGVGEKTEALEPFHPDRIASRIL 295
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>SRP54_BUCAP (Q8K9F7) Signal recognition particle protein (Fifty-four homolog)|
          Length = 450

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 27/89 (30%), Positives = 50/89 (56%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           L + ++++G DA++   KF+  L+          I GI++TK D+ D + G ALS+ +I+
Sbjct: 218 LLIVDSMMGQDAINIAKKFSASLS----------ISGIVITKTDS-DARSGVALSIRHIT 266

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
           G P+ F+G G+    L+  + + I   +L
Sbjct: 267 GKPIKFIGTGEKLHQLEPFHPERIADRIL 295
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>DOCK_SULAC (P27414) Probable signal recognition particle protein (Docking|
           protein) (P41)
          Length = 369

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 26/76 (34%), Positives = 41/76 (53%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           + + ++L G+DA++Q   F   +            D ++LTK D  D K G ALS+ Y  
Sbjct: 290 ILILDSLAGSDALEQARHFENNVG----------YDAVILTKVDA-DAKGGIALSLAYEL 338

Query: 316 GSPVMFVGCGQSYTDL 269
             PV+++G GQ+Y DL
Sbjct: 339 KKPVVYMGVGQNYDDL 354
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>SR543_ARATH (P49967) Signal recognition particle 54 kDa protein 3 (SRP54)|
          Length = 495

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 29/89 (32%), Positives = 45/89 (50%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           +FV ++ +G  A DQ   F Q +A          +  +++TK D    K G ALS V  +
Sbjct: 218 IFVMDSSIGQAAFDQAQAFKQSVA----------VGAVIITKMDG-HAKGGGALSAVAAT 266

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
            SPV+F+G G+   + +  +VK  V  LL
Sbjct: 267 KSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
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>SRP54_HAEIN (P44518) Signal recognition particle protein (Fifty-four homolog)|
          Length = 462

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 28/89 (31%), Positives = 45/89 (50%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           LF  +A+ G DA +    FN+ L           + G++LTK D  D + GAALS+  I+
Sbjct: 218 LFTVDAMTGQDAANTAKAFNEALP----------LTGVILTKVDG-DARGGAALSIRQIT 266

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
           G P+ F+G G+    L+  +   +   +L
Sbjct: 267 GKPIKFLGVGEKTEALEPFHPDRVASRIL 295
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>SRP54_BUCBP (Q89AE4) Signal recognition particle protein (Fifty-four homolog)|
          Length = 450

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 24/88 (27%), Positives = 46/88 (52%)
 Frame = -2

Query: 493 FVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISG 314
           FV +A+ G D+++ +N+FN+ L           +   ++TK D+ D + G  LS+ Y++ 
Sbjct: 219 FVADAMFGQDSINVINEFNKYLP----------VSSFIITKTDS-DTRAGIILSIKYLTK 267

Query: 313 SPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
            P+ F+G G+   +L+      I   +L
Sbjct: 268 KPIKFIGTGEKLEELELFYPDRIASRIL 295
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>SR542_LYCES (P49972) Signal recognition particle 54 kDa protein 2 (SRP54)|
          Length = 499

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 29/89 (32%), Positives = 45/89 (50%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           +FV ++ +G  A DQ   F Q +A          +  +++TK D    K G ALS V  +
Sbjct: 218 IFVMDSSIGQAAFDQAQAFKQSVA----------VGAVIVTKMDG-HAKGGGALSAVAAT 266

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
            SPV+F+G G+   + +  +VK  V  LL
Sbjct: 267 KSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
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>SR541_LYCES (P49971) Signal recognition particle 54 kDa protein 1 (SRP54)|
          Length = 496

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 29/89 (32%), Positives = 45/89 (50%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           +FV ++ +G  A DQ   F Q +A          +  +++TK D    K G ALS V  +
Sbjct: 219 IFVMDSSIGQAAFDQAQAFRQSVA----------VGAVIVTKMDG-HAKGGGALSRVAAT 267

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
            SPV+F+G G+   + +  +VK  V  LL
Sbjct: 268 KSPVIFIGTGEHMDEFEVFDVKPFVSRLL 296
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>SRP54_SYNP7 (Q55311) Signal sequence-binding protein|
          Length = 485

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 26/89 (29%), Positives = 46/89 (51%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           L V ++++G +A      F++++           I G +LTK D  D + GAALS+  +S
Sbjct: 217 LLVVDSMIGQEAASLTRSFHERIG----------ITGAILTKLDG-DSRGGAALSIRRVS 265

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
           G P+ FVG G+    L+  + + +   +L
Sbjct: 266 GQPIKFVGLGEKVEALQPFHPERMASRIL 294
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>SR543_HORVU (P49970) Signal recognition particle 54 kDa protein 3 (SRP54)|
          Length = 493

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 29/89 (32%), Positives = 42/89 (47%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           +FV +  +G  A DQ   F Q  +          +  +++TK D    K G ALS V  +
Sbjct: 217 IFVMDGSIGQAAFDQAQAFKQSAS----------VGAVIVTKLDG-HAKGGGALSAVAAT 265

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
            SPV+F+G G+   D    NV+  V  LL
Sbjct: 266 KSPVIFIGTGEHIDDFDVFNVEPFVARLL 294
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>SR542_HORVU (P49969) Signal recognition particle 54 kDa protein 2 (SRP54)|
          Length = 497

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 28/89 (31%), Positives = 43/89 (48%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           +FV +  +G  A DQ   F Q  +          +  +++TK D    K G ALS V  +
Sbjct: 218 IFVMDGSIGQAAFDQAQAFKQSAS----------VGAVIITKLDG-HAKGGGALSAVAAT 266

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
            SPV+F+G G+   + +  +VK  V  LL
Sbjct: 267 KSPVIFIGTGEHIDEFEIFDVKPFVSRLL 295
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>SR541_HORVU (P49968) Signal recognition particle 54 kDa protein 1 (SRP54)|
          Length = 497

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 28/89 (31%), Positives = 43/89 (48%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           +FV +  +G  A DQ   F Q  +          +  +++TK D    K G ALS V  +
Sbjct: 218 IFVMDGSIGQAAFDQAQAFKQSAS----------VGAVIITKLDG-HAKGGGALSAVAAT 266

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
            SPV+F+G G+   + +  +VK  V  LL
Sbjct: 267 KSPVIFIGTGEHIDEFEIFDVKPFVSRLL 295
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>SRP54_SYNY3 (P74214) Signal recognition particle protein (Fifty-four homolog)|
          Length = 482

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 27/77 (35%), Positives = 42/77 (54%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           L V +A+ G +A +  + F++++           I G +LTK D  D + GAALS+  IS
Sbjct: 217 LLVVDAMTGQEAANLTHTFHEQIG----------ITGAILTKLDG-DTRGGAALSVRQIS 265

Query: 316 GSPVMFVGCGQSYTDLK 266
           G P+ FVG G+    L+
Sbjct: 266 GQPIKFVGVGEKVEALQ 282
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>SRP54_BACSU (P37105) Signal recognition particle protein (Fifty-four homolog)|
          Length = 446

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 25/87 (28%), Positives = 46/87 (52%)
 Frame = -2

Query: 490 VGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGS 311
           V +++ G DAV+    FN++L           + G++LTK D  D + GAALS+  ++ +
Sbjct: 221 VVDSMTGQDAVNVAKSFNEQLG----------LTGVVLTKLDG-DTRGGAALSIRAVTNT 269

Query: 310 PVMFVGCGQSYTDLKKLNVKSIVKTLL 230
           P+ F G G+    L+  + + +   +L
Sbjct: 270 PIKFAGLGEKLDALEPFHPERMASRIL 296
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>SRP54_AQUAE (O67615) Signal recognition particle protein (Fifty-four homolog)|
          Length = 454

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 24/89 (26%), Positives = 46/89 (51%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           L+V +A+ G  A++    F+++L           + G+++TK D  D + G ALS+  + 
Sbjct: 212 LYVADAMQGQTALETAKTFHERLG----------LTGVVITKMDG-DARGGLALSVKEVL 260

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
           G P+ F+G G+   D++      I + +L
Sbjct: 261 GVPIKFIGVGEKIEDIEPFYPDRIAQRIL 289
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>SRP54_SULSO (Q97ZE7) Signal recognition 54 kDa protein (SRP54)|
          Length = 447

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 27/89 (30%), Positives = 44/89 (49%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           + V +A +G  A D  ++F+Q          A  I  +++TK D    K G ALS V  +
Sbjct: 215 ILVIDASIGQKAYDLASRFHQ----------ASPIGSVIITKMDGTA-KGGGALSAVVAT 263

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
           G+ + F+G G+   +L+  N K  V  +L
Sbjct: 264 GATIKFIGTGEKIDELETFNAKRFVSRIL 292
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>SR54C_ARATH (P37107) Signal recognition particle 54 kDa protein, chloroplast|
           precursor (SRP54) (54 chloroplast protein) (54CP) (FFC)
          Length = 564

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 27/77 (35%), Positives = 40/77 (51%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           L V +A+ G +A   +  FN ++           I G +LTK D  D + GAALS+  +S
Sbjct: 293 LLVVDAMTGQEAAALVTTFNVEIG----------ITGAILTKLDG-DSRGGAALSVKEVS 341

Query: 316 GSPVMFVGCGQSYTDLK 266
           G P+  VG G+   DL+
Sbjct: 342 GKPIKLVGRGERMEDLE 358
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>SR541_ARATH (P37106) Signal recognition particle 54 kDa protein 1 (SRP54)|
          Length = 479

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 26/89 (29%), Positives = 45/89 (50%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           +FV ++ +G  A +Q   F + ++          +  +++TK D    K G ALS V  +
Sbjct: 218 IFVMDSSIGQAAFEQAEAFKETVS----------VGAVIITKMDG-HAKGGGALSAVAAT 266

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
            SPV+F+G G+   + +  +VK  V  LL
Sbjct: 267 KSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
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>SRP54_PYRHO (O59307) Signal recognition 54 kDa protein (SRP54)|
          Length = 443

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 26/71 (36%), Positives = 37/71 (52%)
 Frame = -2

Query: 442 FNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKK 263
           +NQ LA     P    I  I++TK D+   K G ALS V  +G+P+ F+G G+   DL+ 
Sbjct: 229 YNQALAFKEATP----IGSIIVTKLDS-SAKGGGALSAVAATGAPIKFIGVGEKIDDLEP 283

Query: 262 LNVKSIVKTLL 230
            +    V  LL
Sbjct: 284 FDPARFVSRLL 294
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>SRP54_PYRAB (Q9V1E8) Signal recognition 54 kDa protein (SRP54)|
          Length = 443

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 26/71 (36%), Positives = 37/71 (52%)
 Frame = -2

Query: 442 FNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKK 263
           +NQ LA     P    I  I++TK D+   K G ALS V  +G+P+ F+G G+   DL+ 
Sbjct: 229 YNQALAFKEATP----IGSIIVTKLDS-SAKGGGALSAVAATGAPIKFIGTGEKIDDLEP 283

Query: 262 LNVKSIVKTLL 230
            +    V  LL
Sbjct: 284 FDPARFVSRLL 294
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>SRP54_PYRKO (Q5JJC8) Signal recognition 54 kDa protein (SRP54)|
          Length = 448

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 26/71 (36%), Positives = 37/71 (52%)
 Frame = -2

Query: 442 FNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKK 263
           +NQ +A     P    I  I++TK D    K G ALS V  +G+P+ F+G G+   DL+ 
Sbjct: 229 YNQAMAFKEATP----IGSIIVTKLDG-SAKGGGALSAVAATGAPIKFIGTGERIDDLEP 283

Query: 262 LNVKSIVKTLL 230
            + K  V  LL
Sbjct: 284 FDPKRFVSRLL 294
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>SRP54_ACIAM (P70722) Signal recognition 54 kDa protein (SRP54) (Fragment)|
          Length = 451

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 28/85 (32%), Positives = 42/85 (49%)
 Frame = -2

Query: 484 EALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPV 305
           +A +G  A D  +KFNQ          A  I  I++TK D    K G ALS V  +G+ +
Sbjct: 221 DASIGQKAYDLASKFNQ----------ASKIGTIIITKMDGTA-KGGGALSAVAATGATI 269

Query: 304 MFVGCGQSYTDLKKLNVKSIVKTLL 230
            F+G G+   +L+  N +  V  +L
Sbjct: 270 KFIGTGEKIDELEVFNPRRFVARIL 294
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>SR542_ARATH (P49966) Signal recognition particle 54 kDa protein 2 (SRP54)|
          Length = 495

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 26/89 (29%), Positives = 43/89 (48%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           +FV ++ +G  A +Q   F Q +A          +  +++TK D    K G  LS V  +
Sbjct: 218 IFVMDSSIGQTAFEQARAFKQTVA----------VGAVIITKMDG-HAKGGGTLSAVAAT 266

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
            SPV+F+G G+   + +  + K  V  LL
Sbjct: 267 KSPVIFIGTGEHMDEFEVFDAKPFVSRLL 295
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>SRP54_ARCFU (O29633) Signal recognition 54 kDa protein (SRP54)|
          Length = 433

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 28/89 (31%), Positives = 42/89 (47%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           L V +A +G  A  Q   F++ +           I+GI++TKFD    K G ALS     
Sbjct: 208 LLVLDAAIGQLASKQAQAFHEAIG----------INGIIITKFDGTA-KGGGALSAARQI 256

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
           G P+ F+G G+   D ++ +    V  LL
Sbjct: 257 GIPIAFIGTGEKVEDFERFDPAGFVSRLL 285
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>SRP54_MYCTU (P66844) Signal recognition particle protein (Fifty-four homolog)|
          Length = 525

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 25/75 (33%), Positives = 38/75 (50%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           LFV +A++G DAV     F + +             G+ LTK D  D + GAALS+  ++
Sbjct: 224 LFVLDAMIGQDAVTTAAAFGEGVG----------FTGVALTKLDG-DARGGAALSVREVT 272

Query: 316 GSPVMFVGCGQSYTD 272
           G P++F   G+   D
Sbjct: 273 GVPILFASTGEKLED 287
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>SRP54_MYCBO (P66845) Signal recognition particle protein (Fifty-four homolog)|
          Length = 525

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 25/75 (33%), Positives = 38/75 (50%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           LFV +A++G DAV     F + +             G+ LTK D  D + GAALS+  ++
Sbjct: 224 LFVLDAMIGQDAVTTAAAFGEGVG----------FTGVALTKLDG-DARGGAALSVREVT 272

Query: 316 GSPVMFVGCGQSYTD 272
           G P++F   G+   D
Sbjct: 273 GVPILFASTGEKLED 287
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>SRP54_ENTHI (O15821) Signal recognition particle 54 kDa protein (SRP54)|
          Length = 487

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 23/89 (25%), Positives = 44/89 (49%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           +FV +  +G  A  Q   F   +           +  +++TK D   +  G ALS V  +
Sbjct: 218 IFVMDGAIGQAAFGQAKAFKDAVE----------VGSVIITKLDGHSNG-GGALSAVAAT 266

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
            SP++F+G G+   ++++ + +S V+ LL
Sbjct: 267 KSPIIFIGTGEKVNEIEEFDAESFVRQLL 295
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>SRP54_PYRFU (Q8U070) Signal recognition 54 kDa protein (SRP54)|
          Length = 443

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 25/71 (35%), Positives = 36/71 (50%)
 Frame = -2

Query: 442 FNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKK 263
           +NQ LA     P    I  I++TK D    K G ALS V  +G+P+ F+G G+   D++ 
Sbjct: 229 YNQALAFKEATP----IGSIIVTKLDG-SAKGGGALSAVAATGAPIKFIGTGEKIDDIEP 283

Query: 262 LNVKSIVKTLL 230
            +    V  LL
Sbjct: 284 FDPPRFVSRLL 294
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>SRP54_SULTO (Q971S9) Signal recognition 54 kDa protein (SRP54)|
          Length = 445

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 27/89 (30%), Positives = 44/89 (49%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           + V +A +G  A D  ++F+Q          A  I  I++TK D    K G ALS V  +
Sbjct: 214 ILVIDASIGQKAYDLASRFHQ----------ASPIGSIIVTKMDGTA-KGGGALSAVAAT 262

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
           G+ + F+G G+   +L+  N +  V  +L
Sbjct: 263 GAAIKFIGTGEKLDELEVFNPRRFVSRIL 291
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>SRP54_METMA (Q8PXF3) Signal recognition 54 kDa protein (SRP54)|
          Length = 443

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 25/85 (29%), Positives = 40/85 (47%)
 Frame = -2

Query: 484 EALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPV 305
           +A +G  A  Q + FN  +           I G+++TK D    K G ALS V  + +P+
Sbjct: 216 DAGIGQQASQQAHAFNDSVG----------ITGVIITKLDGTA-KGGGALSAVSETKAPI 264

Query: 304 MFVGCGQSYTDLKKLNVKSIVKTLL 230
            F+G G++  D +K      +  LL
Sbjct: 265 AFIGVGETPEDFEKFEADRFISRLL 289
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>SRP54_METAC (Q8THD0) Signal recognition 54 kDa protein (SRP54)|
          Length = 440

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 25/85 (29%), Positives = 40/85 (47%)
 Frame = -2

Query: 484 EALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPV 305
           +A +G  A  Q + FN  +           I G+++TK D    K G ALS V  + +P+
Sbjct: 216 DAGIGQQASQQAHAFNDSVG----------ITGVIITKLDGTA-KGGGALSAVSETKAPI 264

Query: 304 MFVGCGQSYTDLKKLNVKSIVKTLL 230
            F+G G++  D +K      +  LL
Sbjct: 265 AFIGVGETPEDFEKFEADRFISRLL 289
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>SRP54_MYCLE (O33013) Signal recognition particle protein (Fifty-four homolog)|
          Length = 521

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 25/75 (33%), Positives = 38/75 (50%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           LFV +A++G DAV     F   +             G++LTK D  D + GAALS+  ++
Sbjct: 224 LFVLDAMIGQDAVTTAAAFGAGVG----------FTGVVLTKLDG-DARGGAALSVREVT 272

Query: 316 GSPVMFVGCGQSYTD 272
           G P++F   G+   D
Sbjct: 273 GVPILFATTGEKLDD 287
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>SRP54_SULAC (O07853) Signal recognition 54 kDa protein (SRP54)|
          Length = 444

 Score = 38.5 bits (88), Expect = 0.012
 Identities = 26/89 (29%), Positives = 44/89 (49%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           + V +A +G  A D  ++F+Q          A  I  ++++K D    K G ALS V  +
Sbjct: 214 ILVIDASIGQKAYDLASRFHQ----------ASPIGSLIVSKMDGTA-KGGGALSAVIAT 262

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
           G+ + F+G G+   +L+  N +  V  LL
Sbjct: 263 GAQIKFIGTGEKLDELEVFNPRRFVSRLL 291
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>SRP54_GEOCY (Q8MZJ6) Signal recognition particle 54 kDa protein (SRP54)|
          Length = 499

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 24/89 (26%), Positives = 41/89 (46%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           +FV +  +G     Q   F +K+           +  +++TK D    K G ALS V  +
Sbjct: 217 IFVMDGTIGQACESQARAFKEKVD----------VASVIVTKLDG-HAKGGGALSAVAAT 265

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
            SP++F+G G+   +++    K  V  LL
Sbjct: 266 RSPIIFIGTGEHIDEMEPFKTKPFVSKLL 294
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>SRP54_THEAQ (O07347) Signal recognition particle protein (Fifty-four homolog)|
          Length = 429

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 22/71 (30%), Positives = 38/71 (53%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           L V +A+ G +A+     F++K+           + G++LTK D  D + GAALS  +++
Sbjct: 214 LLVLDAMTGQEALSVARAFDEKVG----------VTGLVLTKLDG-DARGGAALSARHVT 262

Query: 316 GSPVMFVGCGQ 284
           G P+ F G  +
Sbjct: 263 GKPIYFAGVSE 273
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>SRP54_SCHPO (P21565) Signal recognition particle 54 kDa protein homolog (SRP54)|
          Length = 522

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 26/89 (29%), Positives = 44/89 (49%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           + + +A +G  A  Q   F +  AD   V         ++TK D    K G ALS V  +
Sbjct: 218 IMILDASIGQAAESQSKAFKET-ADFGAV---------IITKLDG-HAKGGGALSAVAAT 266

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
            +P++F+G G+   DL++ + +S +  LL
Sbjct: 267 KTPIVFIGTGEHINDLERFSPRSFISKLL 295
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>SRP54_METJA (Q57565) Signal recognition 54 kDa protein (SRP54)|
          Length = 451

 Score = 37.0 bits (84), Expect = 0.036
 Identities = 24/89 (26%), Positives = 42/89 (47%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           + V +  +G  A  Q   F + + ++ +         I++TK D    K G ALS V  +
Sbjct: 216 ILVIDGTIGQQAGIQAKAFKEAVGEIGS---------IIVTKLDG-SAKGGGALSAVAET 265

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
            +P+ F+G G+   DL+  + K  +  LL
Sbjct: 266 KAPIKFIGIGEGIDDLEPFDPKKFISRLL 294
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>SRP54_THEAC (Q9HKT0) Signal recognition 54 kDa protein (SRP54)|
          Length = 456

 Score = 36.6 bits (83), Expect = 0.047
 Identities = 26/89 (29%), Positives = 40/89 (44%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           L + +A +G  A  +   FN  +           + GI++TK D    K G ALS V   
Sbjct: 212 LMIIDATMGQQAGPEAKAFNDAIG----------VTGIIITKMDGTA-KGGGALSAVAEI 260

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
             P+ F+G G+   DL+  + K  +  LL
Sbjct: 261 HVPIYFIGTGEHMDDLEVFDPKKFLSRLL 289
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>FTSY_SYNY3 (P73930) Cell division protein ftsY homolog|
          Length = 504

 Score = 35.8 bits (81), Expect = 0.081
 Identities = 25/89 (28%), Positives = 41/89 (46%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           L V +A +G + + Q   F +          A  + G++LTK D    K G AL++    
Sbjct: 425 LLVLDATLGQNGLRQAEVFAE----------AAKLSGVVLTKLDG-SAKGGVALAVAQQL 473

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
             P+ F+G G+   DL+  +    V+ LL
Sbjct: 474 NLPIRFIGAGEGIEDLRPFSSYEFVEALL 502
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>FTSY_NEIMC (O30391) Cell division protein ftsY homolog|
          Length = 421

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 23/89 (25%), Positives = 43/89 (48%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           + V +A +G +AV+Q+  F+  L           + G+++TK D    K G   ++    
Sbjct: 343 IVVLDANIGQNAVNQVKAFDDALG----------LTGLIVTKLDGTA-KGGILAALASDR 391

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
             PV ++G G+   DL+  + ++ V  LL
Sbjct: 392 PVPVRYIGVGEGIDDLRPFDARAFVDALL 420
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>FTSY_NEIMB (P57011) Cell division protein ftsY homolog|
          Length = 421

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 23/89 (25%), Positives = 43/89 (48%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           + V +A +G +AV+Q+  F+  L           + G+++TK D    K G   ++    
Sbjct: 343 IVVLDANIGQNAVNQVKAFDDALG----------LTGLIVTKLDGTA-KGGILAALASDR 391

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
             PV ++G G+   DL+  + ++ V  LL
Sbjct: 392 PVPVRYIGVGEGIDDLRPFDARAFVDALL 420
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>FTSY_NEIMA (P57010) Cell division protein ftsY homolog|
          Length = 421

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 23/89 (25%), Positives = 43/89 (48%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           + V +A +G +AV+Q+  F+  L           + G+++TK D    K G   ++    
Sbjct: 343 IVVLDANIGQNAVNQVKAFDDALG----------LTGLIVTKLDGTA-KGGILAALASDR 391

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
             PV ++G G+   DL+  + ++ V  LL
Sbjct: 392 PVPVRYIGVGEGIDDLRPFDARAFVDALL 420
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>SRP54_RAT (Q6AYB5) Signal recognition particle 54 kDa protein (SRP54)|
          Length = 504

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 23/89 (25%), Positives = 40/89 (44%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           ++V +A +G     Q   F  K+           +  +++TK D    K G ALS V  +
Sbjct: 218 VYVMDASIGQACEAQAKAFKDKVD----------VASVIVTKLDG-HAKGGGALSAVAAT 266

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
            SP++F+G G+   D +    +  +  LL
Sbjct: 267 KSPIIFIGTGEHIDDFEPFKTQPFISKLL 295
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>SRP54_PONPY (Q5R4R6) Signal recognition particle 54 kDa protein (SRP54)|
          Length = 504

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 23/89 (25%), Positives = 40/89 (44%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           ++V +A +G     Q   F  K+           +  +++TK D    K G ALS V  +
Sbjct: 218 VYVMDASIGQACEAQAKAFKDKVD----------VASVIVTKLDG-HAKGGGALSAVAAT 266

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
            SP++F+G G+   D +    +  +  LL
Sbjct: 267 KSPIIFIGTGEHIDDFEPFKTQPFISKLL 295
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>SRP54_MOUSE (P14576) Signal recognition particle 54 kDa protein (SRP54)|
          Length = 504

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 23/89 (25%), Positives = 40/89 (44%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           ++V +A +G     Q   F  K+           +  +++TK D    K G ALS V  +
Sbjct: 218 VYVMDASIGQACEAQAKAFKDKVD----------VASVIVTKLDG-HAKGGGALSAVAAT 266

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
            SP++F+G G+   D +    +  +  LL
Sbjct: 267 KSPIIFIGTGEHIDDFEPFKTQPFISKLL 295
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>SRP54_MACFA (Q4R965) Signal recognition particle 54 kDa protein (SRP54)|
          Length = 504

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 23/89 (25%), Positives = 40/89 (44%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           ++V +A +G     Q   F  K+           +  +++TK D    K G ALS V  +
Sbjct: 218 VYVMDASIGQACEAQAKAFKDKVD----------VASVIVTKLDG-HAKGGGALSAVAAT 266

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
            SP++F+G G+   D +    +  +  LL
Sbjct: 267 KSPIIFIGTGEHIDDFEPFKTQPFISKLL 295
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>SRP54_HUMAN (P61011) Signal recognition particle 54 kDa protein (SRP54)|
          Length = 504

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 23/89 (25%), Positives = 40/89 (44%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           ++V +A +G     Q   F  K+           +  +++TK D    K G ALS V  +
Sbjct: 218 VYVMDASIGQACEAQAKAFKDKVD----------VASVIVTKLDG-HAKGGGALSAVAAT 266

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
            SP++F+G G+   D +    +  +  LL
Sbjct: 267 KSPIIFIGTGEHIDDFEPFKTQPFISKLL 295
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>SRP54_CANFA (P61010) Signal recognition particle 54 kDa protein (SRP54)|
          Length = 504

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 23/89 (25%), Positives = 40/89 (44%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           ++V +A +G     Q   F  K+           +  +++TK D    K G ALS V  +
Sbjct: 218 VYVMDASIGQACEAQAKAFKDKVD----------VASVIVTKLDG-HAKGGGALSAVAAT 266

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
            SP++F+G G+   D +    +  +  LL
Sbjct: 267 KSPIIFIGTGEHIDDFEPFKTQPFISKLL 295
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>SRP54_METTH (O27376) Signal recognition 54 kDa protein (SRP54)|
          Length = 442

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = -2

Query: 394 IDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
           I  I++TK D    K G ALS V   G+P+ F+G G+   DL+  + +  +  LL
Sbjct: 238 IGSIIVTKLDG-SAKGGGALSAVAEIGAPIKFIGTGERIDDLEVFDPERFISRLL 291
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>FTSY_HAEIN (P44870) Cell division protein ftsY homolog|
          Length = 414

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 22/84 (26%), Positives = 38/84 (45%)
 Frame = -2

Query: 484 EALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPV 305
           +A  G +A+ Q   FN+ +           + GI LTK D    K G   ++      P+
Sbjct: 336 DAGTGQNAISQAKLFNEAVG----------LTGISLTKLDGTA-KGGVIFAIADQFKLPI 384

Query: 304 MFVGCGQSYTDLKKLNVKSIVKTL 233
            ++G G+   DL++ N K  ++ L
Sbjct: 385 RYIGVGEKIEDLREFNAKEFIEAL 408
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>FTSY_NEIGO (P14929) Cell division protein ftsY homolog|
          Length = 416

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 23/89 (25%), Positives = 43/89 (48%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           + V +A +G +AV+Q+  F+  L           + G+++TK D    K G   ++    
Sbjct: 338 IVVLDANIGQNAVNQVKAFDDALG----------LTGLIVTKLDGTA-KGGILAALASDR 386

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
             PV ++G G+   DL+  + ++ V  LL
Sbjct: 387 PVPVRYIGVGEGIDDLRPFDARAFVDRLL 415
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>FTSY_RICPR (O05948) Cell division protein ftsY homolog|
          Length = 303

 Score = 34.3 bits (77), Expect = 0.23
 Identities = 23/89 (25%), Positives = 42/89 (47%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           + + +A+ G +  +Q+  FN    D++       + G+++TK D    K G  +  V   
Sbjct: 224 ILIIDAITGQNTYNQIEYFN----DVTN------LTGLIVTKLDG-SAKAGVLVGAVQKF 272

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
             PV F+G G+   DLK  N     ++L+
Sbjct: 273 NLPVYFIGIGEKIEDLKIFNRHDFSRSLV 301
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>SRP54_THEVO (Q979Y8) Signal recognition 54 kDa protein (SRP54)|
          Length = 455

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 19/55 (34%), Positives = 29/55 (52%)
 Frame = -2

Query: 394 IDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 230
           + GI++TK D    K G ALS V     P+ F+G G+   D++  + K  +  LL
Sbjct: 236 VTGIIITKMDGTA-KGGGALSAVAKMRVPIYFIGTGEHMDDMEIFDPKKFLSRLL 289
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>FTSY_ECOLI (P10121) Cell division protein ftsY|
          Length = 497

 Score = 32.7 bits (73), Expect = 0.68
 Identities = 22/84 (26%), Positives = 36/84 (42%)
 Frame = -2

Query: 484 EALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPV 305
           +A  G +AV Q   F++ +           + GI LTK D    K G   S+    G P+
Sbjct: 420 DASTGQNAVSQAKLFHEAVG----------LTGITLTKLDGTA-KGGVIFSVADQFGIPI 468

Query: 304 MFVGCGQSYTDLKKLNVKSIVKTL 233
            ++G G+   DL+       ++ L
Sbjct: 469 RYIGVGERIEDLRPFKADDFIEAL 492
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>RMS1_YEAST (Q12504) Putative transcription regulator RMS1|
          Length = 494

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +2

Query: 344 SNLVIDSVKLGEQDTIDQSSCWNSGKICQFLIELVELIN--CVIPNQC 481
           +N  I     GE+  +D   C+N+G++   LI LV+++   C IP  C
Sbjct: 320 NNANIQEFLEGEEIVLDSYDCYNNGELLPQLILLVQILTILCQIPGLC 367
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>ADA1D_PIG (Q9TTM9) Alpha-1D adrenergic receptor (Alpha 1D-adrenoceptor)|
           (Alpha 1D-adrenoreceptor)
          Length = 571

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -2

Query: 220 GSSTCRAPICAAYQRVSVISPNIPRDIVVFLVWFGVELSSLAN 92
           GS+ C    CA    V  +S N+P D      W   EL+  ++
Sbjct: 523 GSAPCAEAPCALRSEVEAVSLNVPHDAAEGATWQAYELADYSH 565
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>FTSY_BUCAP (Q8KA77) Cell division protein ftsY homolog|
          Length = 351

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 19/88 (21%), Positives = 39/88 (44%)
 Frame = -2

Query: 496 LFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYIS 317
           + + +A  G + + Q   F++ +           + G+++TK D    K G   S+    
Sbjct: 272 MLIIDACNGQNTIKQTEMFHKAIN----------LTGLVITKLDGTA-KGGVIFSLANQF 320

Query: 316 GSPVMFVGCGQSYTDLKKLNVKSIVKTL 233
             P+ ++G G+  TDL   N    +K++
Sbjct: 321 LIPIRYIGIGEKTTDLVVFNSNDFIKSI 348
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>PPAC_STRMU (O68579) Probable manganese-dependent inorganic pyrophosphatase (EC|
           3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase)
          Length = 310

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
 Frame = -2

Query: 448 NKFNQKLADLSTVPTARLIDGILLTKFDTID------DKVGAALSMVY 323
           N+F Q +AD+  V    ++D   +  F+T +      + VG+A S+VY
Sbjct: 78  NEFQQSIADIREVEVVEVVDHHRVANFETANPLYMRLEPVGSASSIVY 125


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,219,352
Number of Sequences: 219361
Number of extensions: 1657942
Number of successful extensions: 4566
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 4442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4550
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4373119116
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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