ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal1g22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT017448.1| Zea mays clone EL01N0406C01.c mRNA sequence Length = 770 Score = 442 bits (223), Expect = e-121 Identities = 322/356 (90%) Strand = Plus / Minus Query: 162 tttgaggtcgtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgc 221 ||||||| |||||||| ||||||||||||| ||||||||||||||| |||||||||||| Sbjct: 421 tttgaggaagtcttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgc 362 Query: 222 tcctcaaccaagaaagcacggntnntcctttccctcactgcagttccagagagcactcca 281 || ||||||| |||||||||| | ||||||| || |||||||||||||| || ||||| Sbjct: 361 tcttcaaccaggaaagcacggatgatcctttctctaactgcagttccagatagtactccc 302 Query: 282 ccatagggacggttcacagtcctgcggttcctagacagccttgatcttttgtattcagta 341 |||||||||||||||||||| |||||||||||||||| ||| || |||||||| |||| Sbjct: 301 ccatagggacggttcacagttctgcggttcctagacaacctggaccttttgtactcagct 242 Query: 342 ggcctgaggtggggaataccctggatcttcttcccggtcacagggcacttggggccgctc 401 ||||| || |||||||| ||||||||||||||||||||||| || |||||||| ||||| Sbjct: 241 ggcctcagatggggaatgccctggatcttcttcccggtcacgggacacttgggcccgctg 182 Query: 402 gccctcttcttggtgtactggtacacgagcttgccacctggggtcttgacgacccgcgtc 461 || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 181 gctctcttcttggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtc 122 Query: 462 tggttggacttggtggcatagctgtgcctcttccggtaggtcagacgctgcaccat 517 ||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 121 tggttggacttcgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccat 66
>gb|AY104935.1| Zea mays PCO108550 mRNA sequence Length = 762 Score = 442 bits (223), Expect = e-121 Identities = 322/356 (90%) Strand = Plus / Minus Query: 162 tttgaggtcgtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgc 221 ||||||| |||||||| ||||||||||||| ||||||||||||||| |||||||||||| Sbjct: 449 tttgaggaagtcttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgc 390 Query: 222 tcctcaaccaagaaagcacggntnntcctttccctcactgcagttccagagagcactcca 281 || ||||||| |||||||||| | ||||||| || |||||||||||||| || ||||| Sbjct: 389 tcttcaaccaggaaagcacggatgatcctttctctaactgcagttccagatagtactccc 330 Query: 282 ccatagggacggttcacagtcctgcggttcctagacagccttgatcttttgtattcagta 341 |||||||||||||||||||| |||||||||||||||| ||| || |||||||| |||| Sbjct: 329 ccatagggacggttcacagttctgcggttcctagacaacctggaccttttgtactcagct 270 Query: 342 ggcctgaggtggggaataccctggatcttcttcccggtcacagggcacttggggccgctc 401 ||||| || |||||||| ||||||||||||||||||||||| || |||||||| ||||| Sbjct: 269 ggcctcagatggggaatgccctggatcttcttcccggtcacgggacacttgggcccgctg 210 Query: 402 gccctcttcttggtgtactggtacacgagcttgccacctggggtcttgacgacccgcgtc 461 || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 209 gctctcttcttggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtc 150 Query: 462 tggttggacttggtggcatagctgtgcctcttccggtaggtcagacgctgcaccat 517 ||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 149 tggttggacttcgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccat 94
>ref|XM_482582.1| Oryza sativa (japonica cultivar-group), mRNA Length = 647 Score = 400 bits (202), Expect = e-108 Identities = 310/347 (89%) Strand = Plus / Minus Query: 171 gtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaacc 230 |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 421 gtcttgtccttggttttctgtattttcaggaccttcttgacaatcttctgctcctcgacc 362 Query: 231 aagaaagcacggntnntcctttccctcactgcagttccagagagcactccaccataggga 290 |||||||||||| | |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 361 aagaaagcacggatgatcctttccctaactgcagttccagagagcactccaccatatgga 302 Query: 291 cggttcacagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgagg 350 |||||||||||||||||||||||||||| ||| || || ||||| |||| |||||| | | Sbjct: 301 cggttcacagtcctgcggttcctagacaacctggacctcttgtactcagcaggcctcaag 242 Query: 351 tggggaataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttc 410 |||||||| |||||||||||||||||||| || |||||||| || ||||||||||||||| Sbjct: 241 tggggaatcccctggatcttcttcccggtgacggggcacttcggcccgctcgccctcttc 182 Query: 411 ttggtgtactggtacacgagcttgccacctggggtcttgacgacccgcgtctggttggac 470 || |||||||||||||| ||| | |||||||||||||||||||||| |||||||| ||| Sbjct: 181 ttcgtgtactggtacacaagcctcccacctggggtcttgacgaccctggtctggttcgac 122 Query: 471 ttggtggcatagctgtgcctcttccggtaggtcagacgctgcaccat 517 || || || |||||||| | |||||||||||| || ||||||||||| Sbjct: 121 ttagtcgcgtagctgtgacgcttccggtaggtgagccgctgcaccat 75
>dbj|AK062479.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-G01, full insert sequence Length = 647 Score = 392 bits (198), Expect = e-106 Identities = 309/347 (89%) Strand = Plus / Minus Query: 171 gtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaacc 230 |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 421 gtcttgtccttggttttctgtattttcaggaccttcttgacaatcttctgctcctcgacc 362 Query: 231 aagaaagcacggntnntcctttccctcactgcagttccagagagcactccaccataggga 290 |||||||||||| | |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 361 aagaaagcacggatgatcctttccctaactgcagttccagagagcactccaccatatgga 302 Query: 291 cggttcacagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgagg 350 |||||||||||||||||||||||||||| ||| || || ||||| |||| |||||| | | Sbjct: 301 cggttcacagtcctgcggttcctagacaacctggacctcttgtactcagcaggcctcaag 242 Query: 351 tggggaataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttc 410 |||||||| |||||||||||||||||||| || |||||||| || ||||||||||||||| Sbjct: 241 tggggaatcccctggatcttcttcccggtgacggggcacttcggcccgctcgccctcttc 182 Query: 411 ttggtgtactggtacacgagcttgccacctggggtcttgacgacccgcgtctggttggac 470 || |||||||||||||| ||| | ||||||||| |||||||||||| |||||||| ||| Sbjct: 181 ttcgtgtactggtacacaagcctcccacctgggatcttgacgaccctggtctggttcgac 122 Query: 471 ttggtggcatagctgtgcctcttccggtaggtcagacgctgcaccat 517 || || || |||||||| | |||||||||||| || ||||||||||| Sbjct: 121 ttagtcgcgtagctgtgacgcttccggtaggtgagccgctgcaccat 75
>gb|BT017980.1| Zea mays clone EL01N0525C04.c mRNA sequence Length = 722 Score = 323 bits (163), Expect = 4e-85 Identities = 310/360 (86%) Strand = Plus / Minus Query: 158 ttactttgaggtcgtcttgtccttggtcttctgtattttcaacaccttcttcacaatctt 217 |||||||| || |||||||||||||| || |||||||||| |||||||| |||||||| Sbjct: 432 ttactttgcggctgtcttgtccttggttttttgtattttcaggaccttcttgacaatctt 373 Query: 218 ctgctcctcaaccaagaaagcacggntnntcctttccctcactgcagttccagagagcac 277 ||||||||| |||||||| ||||| | | || ||||| || ||| |||||||||| || Sbjct: 372 ctgctcctcgaccaagaaggcacgaatgattctctccctaacagcaattccagagagtac 313 Query: 278 tccaccatagggacggttcacagtcctgcggttcctagacagccttgatcttttgtattc 337 ||||||||| ||||||||||||||||||||| |||||| || ||| || |||||||| || Sbjct: 312 tccaccataaggacggttcacagtcctgcggctcctaggcaacctggaccttttgtactc 253 Query: 338 agtaggcctgaggtggggaataccctggatcttcttcccggtcacagggcacttggggcc 397 || |||||| | ||| || || |||||||| ||||||||||| || ||||||||||| || Sbjct: 252 agcaggcctcaagtgagggatcccctggattttcttcccggtgacggggcacttgggccc 193 Query: 398 gctcgccctcttcttggtgtactggtacacgagcttgccacctggggtcttgacgacccg 457 |||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| || Sbjct: 192 gctcgccctcttcttggtgtactggtacacaagcttcccgcctggggtcttgacgactcg 133 Query: 458 cgtctggttggacttggtggcatagctgtgcctcttccggtaggtcagacgctgcaccat 517 |||||||||||||| || || |||||||| | ||||||||| || || ||||||||||| Sbjct: 132 ggtctggttggacttcgtagcgtagctgtgacgcttccggtacgtgaggcgctgcaccat 73
>gb|AY105537.1| Zea mays PCO097944 mRNA sequence Length = 694 Score = 321 bits (162), Expect = 1e-84 Identities = 300/347 (86%) Strand = Plus / Minus Query: 171 gtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaacc 230 |||||||||||||| || |||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 423 gtcttgtccttggttttttgtattttcaggaccttcttgacaatcttctgctcctcgacc 364 Query: 231 aagaaagcacggntnntcctttccctcactgcagttccagagagcactccaccataggga 290 ||||| ||||| | | || ||||| || ||| |||||||||| ||||||||||| ||| Sbjct: 363 aagaaggcacgaatgattctctccctaacagcaattccagagagtactccaccataagga 304 Query: 291 cggttcacagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgagg 350 |||||||||||||||||| |||||| || ||| || |||||||| |||| |||||| | | Sbjct: 303 cggttcacagtcctgcggctcctaggcaacctggaccttttgtactcagcaggcctcaag 244 Query: 351 tggggaataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttc 410 || || || |||||||| ||||||||||| || ||||||||||| ||||||||||||||| Sbjct: 243 tgagggatcccctggattttcttcccggtgacggggcacttgggcccgctcgccctcttc 184 Query: 411 ttggtgtactggtacacgagcttgccacctggggtcttgacgacccgcgtctggttggac 470 ||||||||||||||||| ||||| || ||||||||||||||||| || |||||||||||| Sbjct: 183 ttggtgtactggtacacaagcttcccgcctggggtcttgacgactcgggtctggttggac 124 Query: 471 ttggtggcatagctgtgcctcttccggtaggtcagacgctgcaccat 517 || || || |||||||| | ||||||||| || || ||||||||||| Sbjct: 123 ttcgtagcgtagctgtgacgcttccggtacgtgaggcgctgcaccat 77
>ref|XM_480178.1| Oryza sativa (japonica cultivar-group), mRNA Length = 666 Score = 301 bits (152), Expect = 1e-78 Identities = 296/345 (85%) Strand = Plus / Minus Query: 173 cttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaa 232 |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 420 cttgtccttggtcttctggatcttcaacaccttcttcacaatcttctgctcctcgaccaa 361 Query: 233 gaaagcacggntnntcctttccctcactgcagttccagagagcactccaccatagggacg 292 ||||| ||| | |||| || || |||||||| ||||| || || ||||| || ||||| Sbjct: 360 aaaagcccggatgatcctctctctgactgcagtaccagacaggacaccaccgtaaggacg 301 Query: 293 gttcacagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgaggtg 352 |||||| |||||||| ||||| |||| || || || ||||| |||| ||| || ||||| Sbjct: 300 gttcacggtcctgcgattccttgacaatctggacctcttgtactcagcaggtctcaggtg 241 Query: 353 gggaataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttctt 412 ||||| || ||||||||||||||||| || ||||| || || |||||||||| |||||| Sbjct: 240 tggaattccttggatcttcttcccggtgactgggcatttcggcccgctcgcccgcttctt 181 Query: 413 ggtgtactggtacacgagcttgccacctggggtcttgacgacccgcgtctggttggactt 472 ||||||||||||||| ||| | ||||| |||||||||||||| || ||||||||||| || Sbjct: 180 ggtgtactggtacacaagcctcccaccgggggtcttgacgacgcgggtctggttggattt 121 Query: 473 ggtggcatagctgtgcctcttccggtaggtcagacgctgcaccat 517 ||||| |||||||||| ||||||||||||||| ||||||||||| Sbjct: 120 cgtggcgtagctgtgccgcttccggtaggtcagccgctgcaccat 76
>dbj|AK103424.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128K17, full insert sequence Length = 666 Score = 301 bits (152), Expect = 1e-78 Identities = 296/345 (85%) Strand = Plus / Minus Query: 173 cttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaa 232 |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 420 cttgtccttggtcttctggatcttcaacaccttcttcacaatcttctgctcctcgaccaa 361 Query: 233 gaaagcacggntnntcctttccctcactgcagttccagagagcactccaccatagggacg 292 ||||| ||| | |||| || || |||||||| ||||| || || ||||| || ||||| Sbjct: 360 aaaagcccggatgatcctctctctgactgcagtaccagacaggacaccaccgtaaggacg 301 Query: 293 gttcacagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgaggtg 352 |||||| |||||||| ||||| |||| || || || ||||| |||| ||| || ||||| Sbjct: 300 gttcacggtcctgcgattccttgacaatctggacctcttgtactcagcaggtctcaggtg 241 Query: 353 gggaataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttctt 412 ||||| || ||||||||||||||||| || ||||| || || |||||||||| |||||| Sbjct: 240 tggaattccttggatcttcttcccggtgactgggcatttcggcccgctcgcccgcttctt 181 Query: 413 ggtgtactggtacacgagcttgccacctggggtcttgacgacccgcgtctggttggactt 472 ||||||||||||||| ||| | ||||| |||||||||||||| || ||||||||||| || Sbjct: 180 ggtgtactggtacacaagcctcccaccgggggtcttgacgacgcgggtctggttggattt 121 Query: 473 ggtggcatagctgtgcctcttccggtaggtcagacgctgcaccat 517 ||||| |||||||||| ||||||||||||||| ||||||||||| Sbjct: 120 cgtggcgtagctgtgccgcttccggtaggtcagccgctgcaccat 76
>gb|AY105535.1| Zea mays PCO097943 mRNA sequence Length = 589 Score = 270 bits (136), Expect = 5e-69 Identities = 235/269 (87%) Strand = Plus / Minus Query: 171 gtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaacc 230 |||||||||||||| ||||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 537 gtcttgtccttggttttctgtattttcaggaccttcttgacaatattctgctcctcaacc 478 Query: 231 aagaaagcacggntnntcctttccctcactgcagttccagagagcactccaccataggga 290 |||||||||||| | | || ||||| || ||| |||||||||| ||||||||||| ||| Sbjct: 477 aagaaagcacggataattctctccctaacagcaattccagagagtactccaccataagga 418 Query: 291 cggttcacagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgagg 350 ||||| |||||||||||||||||||||| ||| || || ||||| || | ||| || | | Sbjct: 417 cggttaacagtcctgcggttcctagacaacctggacctcttgtactcggcaggtctcaag 358 Query: 351 tggggaataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttc 410 ||||| || |||||||||||||||||||| || ||||||||||| ||||||||||||||| Sbjct: 357 tgggggatcccctggatcttcttcccggtgacggggcacttgggaccgctcgccctcttc 298 Query: 411 ttggtgtactggtacacgagcttgccacc 439 |||||||| |||||||| ||||| ||||| Sbjct: 297 ttggtgtattggtacacaagcttcccacc 269 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 437 acctggggtcttgacgacccgcgtctggttggacttggtggcatagctgtgcctcttccg 496 |||||||||||| |||||||| ||||| ||||| || || || |||||||| | ||| || Sbjct: 257 acctggggtcttcacgacccgggtctgattggattttgtcgcgtagctgtgacgctttcg 198 Query: 497 gtaggtcagacgctgcaccat 517 |||||| || ||||||||||| Sbjct: 197 gtaggtgaggcgctgcaccat 177
>gb|AY846826.1| Triticum aestivum ribosomal protein l34 mRNA, complete cds Length = 404 Score = 234 bits (118), Expect = 3e-58 Identities = 289/347 (83%) Strand = Plus / Minus Query: 171 gtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaacc 230 ||||| |||||||||||||| || || | ||||||||||||||||||||||||||| ||| Sbjct: 389 gtcttctccttggtcttctggatcttaagcaccttcttcacaatcttctgctcctccacc 330 Query: 231 aagaaagcacggntnntcctttccctcactgcagttccagagagcactccaccataggga 290 || || || | | |||| ||||| ||||||| ||||| || || |||||||| ||| Sbjct: 329 aaaaacgccctaatgatcctctccctgactgcaggaccagacagaacaccaccataagga 270 Query: 291 cggttcacagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgagg 350 |||||||||||||| | |||||| |||| || | || ||||| ||||||||||| ||| Sbjct: 269 cggttcacagtcctcctgttcctcgacaatctgggcctcttgtactcagtaggcctcagg 210 Query: 351 tggggaataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttc 410 || || || || ||||||||||| ||||| || ||||| || || || ||||||| |||| Sbjct: 209 tgtgggattccttggatcttcttgccggtaaccgggcattttggcccactcgcccgcttc 150 Query: 411 ttggtgtactggtacacgagcttgccacctggggtcttgacgacccgcgtctggttggac 470 |||||||||||||| || ||||| |||||||||||||||||||| || ||||| || ||| Sbjct: 149 ttggtgtactggtagacaagcttcccacctggggtcttgacgacgcgagtctgattcgac 90 Query: 471 ttggtggcatagctgtgcctcttccggtaggtcagacgctgcaccat 517 |||||||| |||||||| | ||| ||||| ||||| ||||||||||| Sbjct: 89 ttggtggcgtagctgtggcgctttcggtatgtcagccgctgcaccat 43
>dbj|AK059470.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-D12, full insert sequence Length = 562 Score = 220 bits (111), Expect = 4e-54 Identities = 147/160 (91%) Strand = Plus / Minus Query: 159 tactttgaggtcgtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttc 218 |||||||||| | |||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 324 tactttgaggctgacttgtccttggttttctgtattttcaagactttcttcacaatcttc 265 Query: 219 tgctcctcaaccaagaaagcacggntnntcctttccctcactgcagttccagagagcact 278 ||||| ||||||||||||||||| | |||||||||| ||||||||||||||||||||| Sbjct: 264 tgctcttcaaccaagaaagcacgaatgatcctttccctaactgcagttccagagagcact 205 Query: 279 ccaccatagggacggttcacagtcctgcggttcctagaca 318 ||||||||||||||||||||||| |||||||||||||||| Sbjct: 204 ccaccatagggacggttcacagttctgcggttcctagaca 165 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 437 acctggggtcttgacgacccgcgtctggttggacttggtggcatagctgtgcctcttccg 496 |||||| |||||||||||||||||||| || ||||| ||||||||||||||||| || || Sbjct: 164 acctggagtcttgacgacccgcgtctgattagacttcgtggcatagctgtgccttttgcg 105 Query: 497 gtaggtcagacgctgcaccatgtttccgtcgtctccgccgccg 539 ||| ||||| ||||||||||| | |||||| | ||||||||| Sbjct: 104 gtacgtcaggcgctgcaccatctcgccgtcgccgccgccgccg 62 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 50 ctaaaacatttagctagaagggactaaaccattgatcataaccaccaacaaaaatatttt 109 |||||||||| ||||||||| | ||| |||||||||||| |||| |||||||||| |||| Sbjct: 429 ctaaaacattcagctagaagaggctagaccattgatcatcaccatcaacaaaaatgtttt 370 Query: 110 ccttgttta 118 ||||||||| Sbjct: 369 ccttgttta 361
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 248 cctttccctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcg 307 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 14636947 cctttccctaactgcagttccagagagcactccaccatagggacggttcacagttctgcg 14637006 Query: 308 gttcctagacagccttgatcttttgtattcagtaggcctgaggtggggaat 358 ||||||||||| ||| ||||| ||||| |||| ||||||||| |||||||| Sbjct: 14637007 gttcctagacaacctggatctcttgtactcagcaggcctgagatggggaat 14637057 Score = 147 bits (74), Expect = 5e-32 Identities = 80/82 (97%) Strand = Plus / Plus Query: 360 ccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttcttggtgtac 419 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 14638108 ccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttcttggtgtac 14638167 Query: 420 tggtacacgagcttgccacctg 441 |||||||||||||||||||||| Sbjct: 14638168 tggtacacgagcttgccacctg 14638189 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 159 tactttgaggtcgtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttc 218 |||||||||| | |||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 14636774 tactttgaggctgacttgtccttggttttctgtattttcaagactttcttcacaatcttc 14636833 Query: 219 tgctcctcaaccaagaaagcacg 241 ||||| ||||||||||||||||| Sbjct: 14636834 tgctcttcaaccaagaaagcacg 14636856 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 437 acctggggtcttgacgacccgcgtctggttggacttggtggcatagctgtgcctcttccg 496 |||||| |||||||||||||||||||| || ||||| ||||||||||||||||| || || Sbjct: 14638300 acctggagtcttgacgacccgcgtctgattagacttcgtggcatagctgtgccttttgcg 14638359 Query: 497 gtaggtcagacgctgcaccatgtttccgtcgtctccgccgccg 539 ||| ||||| ||||||||||| | |||||| | ||||||||| Sbjct: 14638360 gtacgtcaggcgctgcaccatctcgccgtcgccgccgccgccg 14638402 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 50 ctaaaacatttagctagaagggactaaaccattgatcataaccaccaacaaaaatatttt 109 |||||||||| ||||||||| | ||| |||||||||||| |||| |||||||||| |||| Sbjct: 14636669 ctaaaacattcagctagaagaggctagaccattgatcatcaccatcaacaaaaatgtttt 14636728 Query: 110 ccttgttta 118 ||||||||| Sbjct: 14636729 ccttgttta 14636737
>dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0643D11 Length = 137525 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 248 cctttccctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcg 307 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 58614 cctttccctaactgcagttccagagagcactccaccatagggacggttcacagttctgcg 58673 Query: 308 gttcctagacagccttgatcttttgtattcagtaggcctgaggtggggaat 358 ||||||||||| ||| ||||| ||||| |||| ||||||||| |||||||| Sbjct: 58674 gttcctagacaacctggatctcttgtactcagcaggcctgagatggggaat 58724 Score = 147 bits (74), Expect = 5e-32 Identities = 80/82 (97%) Strand = Plus / Plus Query: 360 ccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttcttggtgtac 419 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 59775 ccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttcttggtgtac 59834 Query: 420 tggtacacgagcttgccacctg 441 |||||||||||||||||||||| Sbjct: 59835 tggtacacgagcttgccacctg 59856 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 159 tactttgaggtcgtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttc 218 |||||||||| | |||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 58441 tactttgaggctgacttgtccttggttttctgtattttcaagactttcttcacaatcttc 58500 Query: 219 tgctcctcaaccaagaaagcacg 241 ||||| ||||||||||||||||| Sbjct: 58501 tgctcttcaaccaagaaagcacg 58523 Score = 101 bits (51), Expect = 2e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 437 acctggggtcttgacgacccgcgtctggttggacttggtggcatagctgtgcctcttccg 496 |||||| |||||||||||||||||||| || ||||| ||||||||||||||||| || || Sbjct: 59967 acctggagtcttgacgacccgcgtctgattagacttcgtggcatagctgtgccttttgcg 60026 Query: 497 gtaggtcagacgctgcaccatgtttccgtcgtctccgccgccg 539 ||| ||||| ||||||||||| | |||||| | ||||||||| Sbjct: 60027 gtacgtcaggcgctgcaccatctcgccgtcgccgccgccgccg 60069 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 50 ctaaaacatttagctagaagggactaaaccattgatcataaccaccaacaaaaatatttt 109 |||||||||| ||||||||| | ||| |||||||||||| |||| |||||||||| |||| Sbjct: 58336 ctaaaacattcagctagaagaggctagaccattgatcatcaccatcaacaaaaatgtttt 58395 Query: 110 ccttgttta 118 ||||||||| Sbjct: 58396 ccttgttta 58404
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Plus Query: 248 cctttccctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcg 307 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 21214454 cctttccctaactgcagttccagagagcactccaccatatggacggttcacagtcctgcg 21214513 Query: 308 gttcctagacagccttgatcttttgtattcagtaggcctgaggtggggaat 358 ||||||||||| ||| || || ||||| |||| |||||| | ||||||||| Sbjct: 21214514 gttcctagacaacctggacctcttgtactcagcaggcctcaagtggggaat 21214564 Score = 103 bits (52), Expect = 6e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 171 gtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaacc 230 |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 21214292 gtcttgtccttggttttctgtattttcaggaccttcttgacaatcttctgctcctcgacc 21214351 Query: 231 aagaaagcacgg 242 |||||||||||| Sbjct: 21214352 aagaaagcacgg 21214363 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 360 ccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttcttggtgtac 419 |||||||||||||||||||| || |||||||| || ||||||||||||||||| |||||| Sbjct: 21215479 ccctggatcttcttcccggtgacggggcacttcggcccgctcgccctcttcttcgtgtac 21215538 Query: 420 tggtacacgagcttgccacctg 441 |||||||| ||| | ||||||| Sbjct: 21215539 tggtacacaagcctcccacctg 21215560 Score = 99.6 bits (50), Expect = 1e-17 Identities = 62/66 (93%) Strand = Plus / Minus Query: 173 cttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaa 232 |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 3289299 cttgtccttggtcttctggatcttcaacaccttcttcacaatcttctgctcctcgaccaa 3289240 Query: 233 gaaagc 238 ||||| Sbjct: 3289239 aaaagc 3289234 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Minus Query: 436 cacctggggtcttgacgacccgcgtctggttggacttggtggcatagctgtgcctcttcc 495 |||| |||||||||||||| || ||||||||||| || ||||| |||||||||| ||||| Sbjct: 3286942 caccgggggtcttgacgacgcgggtctggttggatttcgtggcgtagctgtgccgcttcc 3286883 Query: 496 ggtaggtcagacgctgcaccat 517 |||||||||| ||||||||||| Sbjct: 3286882 ggtaggtcagccgctgcaccat 3286861 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 363 tggatcttcttcccggtcacagggcacttggggccgctcgccctcttcttggtgtactgg 422 ||||||||||||||||| || ||||| || || |||||||||| |||||||||||||||| Sbjct: 3287295 tggatcttcttcccggtgactgggcatttcggcccgctcgcccgcttcttggtgtactgg 3287236 Query: 423 tacacgagcttgccacct 440 ||||| ||| | |||||| Sbjct: 3287235 tacacaagcctcccacct 3287218 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 437 acctggggtcttgacgacccgcgtctggttggacttggtggcatagctgtgcctcttccg 496 |||||||||||||||||||| |||||||| ||||| || || |||||||| | |||||| Sbjct: 21215657 acctggggtcttgacgaccctggtctggttcgacttagtcgcgtagctgtgacgcttccg 21215716 Query: 497 gtaggtcagacgctgcaccat 517 |||||| || ||||||||||| Sbjct: 21215717 gtaggtgagccgctgcaccat 21215737 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 258 actgcagttccagagagcactccaccatagggacggttcacagtcctgcggttcctagac 317 |||||||| ||||| || || ||||| || ||||||||||| |||||||| ||||| ||| Sbjct: 3289141 actgcagtaccagacaggacaccaccgtaaggacggttcacggtcctgcgattccttgac 3289082 Query: 318 a 318 | Sbjct: 3289081 a 3289081
>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016C11 Length = 170723 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Plus Query: 248 cctttccctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcg 307 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 40731 cctttccctaactgcagttccagagagcactccaccatatggacggttcacagtcctgcg 40790 Query: 308 gttcctagacagccttgatcttttgtattcagtaggcctgaggtggggaat 358 ||||||||||| ||| || || ||||| |||| |||||| | ||||||||| Sbjct: 40791 gttcctagacaacctggacctcttgtactcagcaggcctcaagtggggaat 40841 Score = 103 bits (52), Expect = 6e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 171 gtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaacc 230 |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||| Sbjct: 40569 gtcttgtccttggttttctgtattttcaggaccttcttgacaatcttctgctcctcgacc 40628 Query: 231 aagaaagcacgg 242 |||||||||||| Sbjct: 40629 aagaaagcacgg 40640 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 360 ccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttcttggtgtac 419 |||||||||||||||||||| || |||||||| || ||||||||||||||||| |||||| Sbjct: 41756 ccctggatcttcttcccggtgacggggcacttcggcccgctcgccctcttcttcgtgtac 41815 Query: 420 tggtacacgagcttgccacctg 441 |||||||| ||| | ||||||| Sbjct: 41816 tggtacacaagcctcccacctg 41837 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 437 acctggggtcttgacgacccgcgtctggttggacttggtggcatagctgtgcctcttccg 496 |||||||||||||||||||| |||||||| ||||| || || |||||||| | |||||| Sbjct: 41934 acctggggtcttgacgaccctggtctggttcgacttagtcgcgtagctgtgacgcttccg 41993 Query: 497 gtaggtcagacgctgcaccat 517 |||||| || ||||||||||| Sbjct: 41994 gtaggtgagccgctgcaccat 42014
>gb|DQ407752.1| Gymnadenia conopsea ribosomal protein mRNA, complete cds Length = 773 Score = 99.6 bits (50), Expect = 1e-17 Identities = 122/146 (83%) Strand = Plus / Minus Query: 372 ttcccggtcacagggcacttggggccgctcgccctcttcttggtgtactggtacacgagc 431 ||||||||||||||||| || || || ||||||||||| || |||||||||||||| ||| Sbjct: 224 ttcccggtcacagggcatttcggcccactcgccctcttattcgtgtactggtacacaagc 165 Query: 432 ttgccacctggggtcttgacgacccgcgtctggttggacttggtggcatagctgtgcctc 491 | || || ||||| || || |||| |||||||| ||||| ||||||||||| |||| | Sbjct: 164 ctcccgcccggggttttcacaaccctagtctggttagacttcgtggcatagctatgccgc 105 Query: 492 ttccggtaggtcagacgctgcaccat 517 || | ||| || |||||||||||||| Sbjct: 104 tttctgtatgtgagacgctgcaccat 79
>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0438H08 Length = 148626 Score = 99.6 bits (50), Expect = 1e-17 Identities = 62/66 (93%) Strand = Plus / Minus Query: 173 cttgtccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaa 232 |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 66866 cttgtccttggtcttctggatcttcaacaccttcttcacaatcttctgctcctcgaccaa 66807 Query: 233 gaaagc 238 ||||| Sbjct: 66806 aaaagc 66801 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Minus Query: 436 cacctggggtcttgacgacccgcgtctggttggacttggtggcatagctgtgcctcttcc 495 |||| |||||||||||||| || ||||||||||| || ||||| |||||||||| ||||| Sbjct: 64509 caccgggggtcttgacgacgcgggtctggttggatttcgtggcgtagctgtgccgcttcc 64450 Query: 496 ggtaggtcagacgctgcaccat 517 |||||||||| ||||||||||| Sbjct: 64449 ggtaggtcagccgctgcaccat 64428 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 363 tggatcttcttcccggtcacagggcacttggggccgctcgccctcttcttggtgtactgg 422 ||||||||||||||||| || ||||| || || |||||||||| |||||||||||||||| Sbjct: 64862 tggatcttcttcccggtgactgggcatttcggcccgctcgcccgcttcttggtgtactgg 64803 Query: 423 tacacgagcttgccacct 440 ||||| ||| | |||||| Sbjct: 64802 tacacaagcctcccacct 64785 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 258 actgcagttccagagagcactccaccatagggacggttcacagtcctgcggttcctagac 317 |||||||| ||||| || || ||||| || ||||||||||| |||||||| ||||| ||| Sbjct: 66708 actgcagtaccagacaggacaccaccgtaaggacggttcacggtcctgcgattccttgac 66649 Query: 318 a 318 | Sbjct: 66648 a 66648
>gb|DQ160155.1| Taraxacum officinale TO121-23 (To121-23) mRNA, partial cds Length = 243 Score = 89.7 bits (45), Expect = 9e-15 Identities = 177/221 (80%) Strand = Plus / Minus Query: 297 acagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgaggtgggga 356 |||||||| | |||||| || | |||||| |||||||||||||| ||||| | ||| ||| Sbjct: 241 acagtccttctgttccttgataaccttgaccttttgtattcagttggcctcaagtgagga 182 Query: 357 ataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttcttggtg 416 || ||||| || |||| ||||| |||||||| || || || || || |||||||| ||| Sbjct: 181 atcccctgaattctcttgccggtaacagggcatttaggtccactagctctcttcttagtg 122 Query: 417 tactggtacacgagcttgccacctggggtcttgacgacccgcgtctggttggacttggtg 476 |||||| || ||||| ||||| ||||| |||||||| | |||||||| ||||| Sbjct: 121 gtctggtagaccagctttccaccaggggttttgacgactctatgttggttggatttggta 62 Query: 477 gcatagctgtgcctcttccggtaggtcagacgctgcaccat 517 |||||||| || | |||||||| || |||||||||||||| Sbjct: 61 gcatagctatggcgtttccggtaagtgagacgctgcaccat 21
>emb|AJ718263.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT4-24-380, cultivar Bright Yellow 2 Length = 271 Score = 85.7 bits (43), Expect = 1e-13 Identities = 169/211 (80%) Strand = Plus / Plus Query: 279 ccaccatagggacggttcacagtcctgcggttcctagacagccttgatcttttgtattca 338 |||||||| | ||||||||||||||| | ||| || |||| ||||| || ||||||||| Sbjct: 49 ccaccataagcacggttcacagtcctcctgtttctcgacaatcttgacctcttgtattca 108 Query: 339 gtaggcctgaggtggggaataccctggatcttcttcccggtcacagggcacttggggccg 398 |||||||| | ||| ||||| || || || | || || || ||||||||||| || || Sbjct: 109 gtaggcctcaagtgaggaatcccttgaattctttttccagtaacagggcacttaggtcca 168 Query: 399 ctcgccctcttcttggtgtactggtacacgagcttgccacctggggtcttgacgacccgc 458 || |||||||||||||| |||||| | ||||| ||||||||||| ||||| |||| Sbjct: 169 ctagccctcttcttggtactctggtaaatcagctttccacctggggttttgacaacccta 228 Query: 459 gtctggttggacttggtggcatagctgtgcc 489 ||||| || ||||||||||||||||||| Sbjct: 229 tgttggttagatttggtggcatagctgtgcc 259
>gb|L27107.1|TOB6RPLA Nicotiana tabacum (TSC40-4) 60S ribosomal protein L34 mRNA, complete cds Length = 597 Score = 85.7 bits (43), Expect = 1e-13 Identities = 169/211 (80%) Strand = Plus / Minus Query: 279 ccaccatagggacggttcacagtcctgcggttcctagacagccttgatcttttgtattca 338 |||||||| | ||||||||||||||| | ||| || |||| ||||| || ||||||||| Sbjct: 271 ccaccataagcacggttcacagtcctcctgtttctcgacaatcttgacctcttgtattca 212 Query: 339 gtaggcctgaggtggggaataccctggatcttcttcccggtcacagggcacttggggccg 398 |||||||| | ||| ||||| || || || | || || || ||||||||||| || || Sbjct: 211 gtaggcctcaagtgaggaatcccttgaattctttttccagtaacagggcacttaggtcca 152 Query: 399 ctcgccctcttcttggtgtactggtacacgagcttgccacctggggtcttgacgacccgc 458 || |||||||||||||| |||||| | ||||| ||||||||||| ||||| |||| Sbjct: 151 ctagccctcttcttggtactctggtaaatcagctttccacctggggttttgacaacccta 92 Query: 459 gtctggttggacttggtggcatagctgtgcc 489 ||||| || ||||||||||||||||||| Sbjct: 91 tgttggttagatttggtggcatagctgtgcc 61
>dbj|AK059401.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-B04, full insert sequence Length = 303 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 50 ctaaaacatttagctagaagggactaaaccattgatcataaccaccaacaaaaatatttt 109 |||||||||| ||||||||| | ||| |||||||||||| |||| |||||||||| |||| Sbjct: 170 ctaaaacattcagctagaagaggctagaccattgatcatcaccatcaacaaaaatgtttt 111 Query: 110 ccttgttta 118 ||||||||| Sbjct: 110 ccttgttta 102 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 159 tactttgaggtcgtcttgtccttggtcttctgtattttcaacaccttcttcacaatcttc 218 |||||||||| | |||||||||||| |||||||||||||| || ||||||||||||||| Sbjct: 65 tactttgaggctgacttgtccttggttttctgtattttcaagactttcttcacaatcttc 6 Query: 219 tgctc 223 ||||| Sbjct: 5 tgctc 1
>gb|AY174764.1| Orobanche cumana 60S ribosomal protein L34 mRNA, partial cds Length = 548 Score = 75.8 bits (38), Expect = 1e-10 Identities = 209/267 (78%) Strand = Plus / Minus Query: 185 cttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggnt 244 |||||| || ||||| |||||||||||||| || ||||| || || || ||||| || | Sbjct: 279 cttctgaatcttcaataccttcttcacaattttttgctcttccactaaaaaagcccgaat 220 Query: 245 nntcctttccctcactgcagttccagagagcactccaccatagggacggttcacagtcct 304 |||| |||||||| ||| ||||||| | || |||||||| |||||| | |||||||| Sbjct: 219 aatcctctccctcacagcaattccagataatacaccaccataaggacgggttacagtcct 160 Query: 305 gcggttcctagacagccttgatcttttgtattcagtaggcctgaggtggggaataccctg 364 |||||| || | || | ||||| ||||| |||| |||||| | || ||||| || || Sbjct: 159 gcggtttctgggcaatcgagatctcttgtactcagcaggcctcaaatgaggaatcccttg 100 Query: 365 gatcttcttcccggtcacagggcacttggggccgctcgccctcttcttggtgtactggta 424 ||| |||| ||||| || || || ||||| ||||| ||||||||||| ||| | |||| Sbjct: 99 gattctcttgccggttacgggacatttgggtccgctagccctcttcttagtgctccggta 40 Query: 425 cacgagcttgccacctggggtcttgac 451 ||| ||||| || || ||||| ||||| Sbjct: 39 caccagcttccccccaggggttttgac 13
>emb|CR955009.1| Medicago truncatula chromosome 5 clone mth2-38i20, COMPLETE SEQUENCE Length = 123473 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Minus Query: 276 actccaccatagggacggttcacagtcctgcggttcctagacagccttgatcttttgtat 335 ||||| ||||| | ||||||||||||||| ||||| |||| |||||||||||| ||||| Sbjct: 76427 actccgccataagcacggttcacagtcctacggtttctaggcagccttgatctcttgtac 76368 Query: 336 tcagtaggcct 346 || |||||||| Sbjct: 76367 tctgtaggcct 76357 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 201 accttcttcacaatcttctgctcctcaaccaagaaagc 238 ||||| ||||| ||||| ||||| |||||||||||||| Sbjct: 76600 acctttttcacgatcttttgctcttcaaccaagaaagc 76563
>gb|L27089.1|TOB6RPL Nicotiana tabacum (TSC40-3) 60S ribosomal protein L34 mRNA, complete cds Length = 630 Score = 69.9 bits (35), Expect = 9e-09 Identities = 167/211 (79%) Strand = Plus / Minus Query: 279 ccaccatagggacggttcacagtcctgcggttcctagacagccttgatcttttgtattca 338 |||||||| | ||||||||||||||| | ||| || |||| ||||| || ||||||||| Sbjct: 257 ccaccataagcacggttcacagtcctcctgtttctggacaatcttgacctcttgtattca 198 Query: 339 gtaggcctgaggtggggaataccctggatcttcttcccggtcacagggcacttggggccg 398 |||||||| | ||| ||||| || || || | || || || ||||||||||| || || Sbjct: 197 gtaggcctcaagtgaggaatcccttgaattctttttccagtaacagggcacttaggtcca 138 Query: 399 ctcgccctcttcttggtgtactggtacacgagcttgccacctggggtcttgacgacccgc 458 || ||||||||||| || ||| || | ||||| ||||||||||| ||||| |||| Sbjct: 137 ctagccctcttcttagtactctgataaatcagctttccacctggggttttgacaacccta 78 Query: 459 gtctggttggacttggtggcatagctgtgcc 489 ||||| || ||||||||||||||||||| Sbjct: 77 tgttggttagatttggtggcatagctgtgcc 47
>ref|XM_359481.1| Magnaporthe grisea 70-15 hypothetical protein (MG05296.4) partial mRNA Length = 351 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 200 caccttcttcacaatcttctgctcctcaaccaagaaagcacgg 242 ||||||||| ||||||||||||||||| | ||||||||||||| Sbjct: 315 caccttcttgacaatcttctgctcctcgatcaagaaagcacgg 273
>gb|AY849626.1| Magnaporthe grisea 60S ribosomal protein L34-B-like protein mRNA, complete cds Length = 683 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 200 caccttcttcacaatcttctgctcctcaaccaagaaagcacgg 242 ||||||||| ||||||||||||||||| | ||||||||||||| Sbjct: 375 caccttcttgacaatcttctgctcctcgatcaagaaagcacgg 333
>gb|AY023446.1| Oryza sativa microsatellite MRG5771 containing (TCC)X8, genomic sequence Length = 224 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 474 gtggcatagctgtgcctcttccggtaggtcagacgctgcaccatgtttccgtcgtctccg 533 ||||||||||||||||| || ||||| ||||| ||||||||||| | |||||| | ||| Sbjct: 223 gtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccgtcgccgccg 164 Query: 534 ccgccg 539 |||||| Sbjct: 163 ccgccg 158
>ref|NM_113811.3| Arabidopsis thaliana structural constituent of ribosome AT3G28900 mRNA, complete cds Length = 574 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaaccaagaa 235 ||||| |||||||||||||||||||| || ||||||||||| Sbjct: 357 ttcaaaaccttcttcacaatcttctgttcttcaaccaagaa 317
>gb|AY389653.1| Hyacinthus orientalis ribosomal protein L34 (RPL34) mRNA, complete cds Length = 608 Score = 58.0 bits (29), Expect = 3e-05 Identities = 186/238 (78%), Gaps = 1/238 (0%) Strand = Plus / Minus Query: 177 tccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaagaaa 236 ||||||| |||||| || |||| || |||||||||||||||||||| || |||||| | Sbjct: 368 tccttggccttctgaatcttcagaactttcttcacaatcttctgctcttctaccaag-ag 310 Query: 237 gcacggntnntcctttccctcactgcagttccagagagcactccaccatagggacggttc 296 || ||| | | || ||| |||| || | |||||||| ||||||||||| | ||| ||| Sbjct: 309 gcccggatgattctctccttcaccgcgctgccagagagaactccaccatatgcacgattc 250 Query: 297 acagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgaggtgggga 356 || ||||| | |||||| | || ||| || || ||||| |||||||| || || || ||| Sbjct: 249 actgtcctcctgttccttgccaacctagacctcttgtactcagtaggtctaagatgagga 190 Query: 357 ataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttcttgg 414 || || || || |||| || || ||||||||| | || || ||||||||||||||| Sbjct: 189 atcccttgaattctctttccagtgacagggcaccttggccctttcgccctcttcttgg 132
>gb|AY091359.1| Arabidopsis thaliana putative 60S ribosomal protein L34 (At3g28900) mRNA, complete cds Length = 394 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaaccaagaa 235 ||||| |||||||||||||||||||| || ||||||||||| Sbjct: 323 ttcaaaaccttcttcacaatcttctgttcttcaaccaagaa 283
>gb|AY045818.1| Arabidopsis thaliana putative 60S ribosomal protein L34 (At3g28900) mRNA, complete cds Length = 568 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaaccaagaa 235 ||||| |||||||||||||||||||| || ||||||||||| Sbjct: 357 ttcaaaaccttcttcacaatcttctgttcttcaaccaagaa 317
>emb|BX825773.1|CNS0A6BE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL61ZF04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 547 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaaccaagaa 235 ||||| |||||||||||||||||||| || ||||||||||| Sbjct: 330 ttcaaaaccttcttcacaatcttctgttcttcaaccaagaa 290
>dbj|AP000386.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MLD15 Length = 82430 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaaccaagaa 235 ||||| |||||||||||||||||||| || ||||||||||| Sbjct: 49190 ttcaaaaccttcttcacaatcttctgttcttcaaccaagaa 49230
>gb|AC155348.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH097M21, complete sequence Length = 131063 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaaccaagaa 235 ||||| ||||||||||||||||||||||| || |||||||| Sbjct: 36858 ttcaaaaccttcttcacaatcttctgctcttccaccaagaa 36818
>gb|BT013115.1| Lycopersicon esculentum clone 114402R, mRNA sequence Length = 663 Score = 56.0 bits (28), Expect = 1e-04 Identities = 208/269 (77%) Strand = Plus / Minus Query: 177 tccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaagaaa 236 ||||||| ||||| || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 377 tccttggctttctggatcttcaaaaccttcttcacgatcttttgttcttcaaccaaaaag 318 Query: 237 gcacggntnntcctttccctcactgcagttccagagagcactccaccatagggacggttc 296 || | | | ||||||| | || ||| | || || | ||| |||||||| | ||||||| Sbjct: 317 gctctgatgatcctttcacgtacagcactgccggacaacacaccaccataagcacggttc 258 Query: 297 acagtcctgcggttcctagacagccttgatcttttgtattcagtaggcctgaggtgggga 356 |||||||| | ||||||||| | ||| ||||| ||||| |||| ||| || | ||| ||| Sbjct: 257 acagtcctcctgttcctagataacctggatctcttgtactcagcaggtctcaagtgtgga 198 Query: 357 ataccctggatcttcttcccggtcacagggcacttggggccgctcgccctcttcttggtg 416 || || || || |||| || || ||||||||||| || || | ||||||||||| || Sbjct: 197 atcccttgaattctctttccagttacagggcacttaggtccattagccctcttcttcgta 138 Query: 417 tactggtacacgagcttgccacctggggt 445 |||||| | ||||| ||||||||||| Sbjct: 137 gtctggtaaatcagctttccacctggggt 109
>gb|AF378548.1|AF378548 Ophiostoma novo-ulmi clone 10 ribosomal protein L34-like protein mRNA, complete cds Length = 555 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 201 accttcttcacaatcttctgctcctcaa 228 |||||||||||||||||||||||||||| Sbjct: 316 accttcttcacaatcttctgctcctcaa 289
>gb|AC166313.2| Medicago truncatula chromosome 7 BAC clone mte1-4j13, complete sequence Length = 123373 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 461 ctggttggacttggtggcatagctgtgcctc 491 ||||||||| ||||||||||||||||||||| Sbjct: 26478 ctggttggatttggtggcatagctgtgcctc 26508
>gb|AC122544.1| Genomic sequence for Lycopersicon esculentum, clone L136C6, complete sequence Length = 121637 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 252 tccctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggtt 310 ||||| || ||| ||||||| ||||| || ||||| | ||||||||||||||||||||| Sbjct: 64174 tcccttacagcacttccagatagcacacctccataagcacggttcacagtcctgcggtt 64232
>gb|AC148762.2| Medicago truncatula chromosome 7 BAC clone mth2-15p5, complete sequence Length = 136116 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 461 ctggttggacttggtggcatagctgtgcctc 491 ||||||||| ||||||||||||||||||||| Sbjct: 84457 ctggttggatttggtggcatagctgtgcctc 84427
>ref|XM_384325.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04149.1) partial mRNA Length = 333 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaa 228 |||||||||||||| || |||||||||||||||| Sbjct: 302 ttcaacaccttcttgacgatcttctgctcctcaa 269
>ref|NM_105630.2| Arabidopsis thaliana RPL34 (RIBOSOMAL PROTEIN L34); structural constituent of ribosome AT1G69620 (RPL34) mRNA, complete cds Length = 664 Score = 50.1 bits (25), Expect = 0.008 Identities = 133/170 (78%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggntnntcctttcc 254 ||||| ||||||||||||||||| |||||||| || | ||| ||||| | | |||||| Sbjct: 385 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgattctttcc 326 Query: 255 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 314 || || |||| ||||| | || |||||||| | ||||||||| ||||| | ||| || Sbjct: 325 ctaacagcagaaccagacaaaaccccaccataagcacggttcacggtcctcctgtttctt 266 Query: 315 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctg 364 || | | ||| || ||||| ||||| ||||| | ||| ||||||||||| Sbjct: 265 gataaacgtgacctcttgtactcagttggcctcaagtgaggaataccctg 216
>gb|AF349526.1| Arabidopsis thaliana putative 60S ribosomal protein L34 (At1g69620) mRNA, complete cds Length = 410 Score = 50.1 bits (25), Expect = 0.008 Identities = 133/170 (78%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggntnntcctttcc 254 ||||| ||||||||||||||||| |||||||| || | ||| ||||| | | |||||| Sbjct: 323 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgattctttcc 264 Query: 255 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 314 || || |||| ||||| | || |||||||| | ||||||||| ||||| | ||| || Sbjct: 263 ctaacagcagaaccagacaaaaccccaccataagcacggttcacggtcctcctgtttctt 204 Query: 315 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctg 364 || | | ||| || ||||| ||||| ||||| | ||| ||||||||||| Sbjct: 203 gataaacgtgacctcttgtactcagttggcctcaagtgaggaataccctg 154
>gb|AF327531.1| Arabidopsis thaliana putative 60S ribosomal protein L34 (At1g69620) mRNA, complete cds Length = 598 Score = 50.1 bits (25), Expect = 0.008 Identities = 133/170 (78%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggntnntcctttcc 254 ||||| ||||||||||||||||| |||||||| || | ||| ||||| | | |||||| Sbjct: 384 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgattctttcc 325 Query: 255 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 314 || || |||| ||||| | || |||||||| | ||||||||| ||||| | ||| || Sbjct: 324 ctaacagcagaaccagacaaaaccccaccataagcacggttcacggtcctcctgtttctt 265 Query: 315 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctg 364 || | | ||| || ||||| ||||| ||||| | ||| ||||||||||| Sbjct: 264 gataaacgtgacctcttgtactcagttggcctcaagtgaggaataccctg 215
>gb|AF446885.1|AF446885 Arabidopsis thaliana F24J1.23/F24J1.23 mRNA, complete cds Length = 360 Score = 50.1 bits (25), Expect = 0.008 Identities = 133/170 (78%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggntnntcctttcc 254 ||||| ||||||||||||||||| |||||||| || | ||| ||||| | | |||||| Sbjct: 323 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgattctttcc 264 Query: 255 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 314 || || |||| ||||| | || |||||||| | ||||||||| ||||| | ||| || Sbjct: 263 ctaacagcagaaccagacaaaaccccaccataagcacggttcacggtcctcctgtttctt 204 Query: 315 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctg 364 || | | ||| || ||||| ||||| ||||| | ||| ||||||||||| Sbjct: 203 gataaacgtgacctcttgtactcagttggcctcaagtgaggaataccctg 154
>gb|AY052720.1| Arabidopsis thaliana F24J1.23/F24J1.23 mRNA, complete cds Length = 539 Score = 50.1 bits (25), Expect = 0.008 Identities = 133/170 (78%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggntnntcctttcc 254 ||||| ||||||||||||||||| |||||||| || | ||| ||||| | | |||||| Sbjct: 385 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgattctttcc 326 Query: 255 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 314 || || |||| ||||| | || |||||||| | ||||||||| ||||| | ||| || Sbjct: 325 ctaacagcagaaccagacaaaaccccaccataagcacggttcacggtcctcctgtttctt 266 Query: 315 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctg 364 || | | ||| || ||||| ||||| ||||| | ||| ||||||||||| Sbjct: 265 gataaacgtgacctcttgtactcagttggcctcaagtgaggaataccctg 216
>emb|BX816733.1|CNS0ABV7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZB06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1297 Score = 50.1 bits (25), Expect = 0.008 Identities = 88/110 (80%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggntnntcctttcc 254 ||||| ||||||||||||||||| |||||||| || | ||| ||||| | | |||||| Sbjct: 995 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgattctttcc 936 Query: 255 ctcactgcagttccagagagcactccaccatagggacggttcacagtcct 304 || || |||| ||||| | || |||||||| | ||||||||| ||||| Sbjct: 935 ctaacagcagaaccagacaaaaccccaccataagcacggttcacggtcct 886
>emb|BX814797.1|CNS0AC1Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB94ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 525 Score = 50.1 bits (25), Expect = 0.008 Identities = 133/170 (78%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggntnntcctttcc 254 ||||| ||||||||||||||||| |||||||| || | ||| ||||| | | |||||| Sbjct: 371 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgattctttcc 312 Query: 255 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 314 || || |||| ||||| | || |||||||| | ||||||||| ||||| | ||| || Sbjct: 311 ctaacagcagaaccagacaaaaccccaccataagcacggttcacggtcctcctgtttctt 252 Query: 315 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctg 364 || | | ||| || ||||| ||||| ||||| | ||| ||||||||||| Sbjct: 251 gataaacgtgacctcttgtactcagttggcctcaagtgaggaataccctg 202
>emb|BX818608.1|CNS0AAXR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZG11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 577 Score = 50.1 bits (25), Expect = 0.008 Identities = 133/170 (78%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggntnntcctttcc 254 ||||| ||||||||||||||||| |||||||| || | ||| ||||| | | |||||| Sbjct: 337 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgattctttcc 278 Query: 255 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 314 || || |||| ||||| | || |||||||| | ||||||||| ||||| | ||| || Sbjct: 277 ctaacagcagaaccagacaaaaccccaccataagcacggttcacggtcctcctgtttctt 218 Query: 315 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctg 364 || | | ||| || ||||| ||||| ||||| | ||| ||||||||||| Sbjct: 217 gataaacgtgacctcttgtactcagttggcctcaagtgaggaataccctg 168
>emb|BX825772.1|CNS0A6BD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL61ZF03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 544 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaaccaagaa 235 ||||| |||||||| ||||||||||| || ||||||||||| Sbjct: 330 ttcaaaaccttctttacaatcttctgttcttcaaccaagaa 290
>gb|AF324703.1|AF324703 Arabidopsis thaliana T6C23.18 mRNA, complete cds Length = 599 Score = 50.1 bits (25), Expect = 0.008 Identities = 133/170 (78%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggntnntcctttcc 254 ||||| ||||||||||||||||| |||||||| || | ||| ||||| | | |||||| Sbjct: 385 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgattctttcc 326 Query: 255 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 314 || || |||| ||||| | || |||||||| | ||||||||| ||||| | ||| || Sbjct: 325 ctaacagcagaaccagacaaaaccccaccataagcacggttcacggtcctcctgtttctt 266 Query: 315 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctg 364 || | | ||| || ||||| ||||| ||||| | ||| ||||||||||| Sbjct: 265 gataaacgtgacctcttgtactcagttggcctcaagtgaggaataccctg 216
>gb|AY085544.1| Arabidopsis thaliana clone 1568 mRNA, complete sequence Length = 582 Score = 50.1 bits (25), Expect = 0.008 Identities = 133/170 (78%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggntnntcctttcc 254 ||||| ||||||||||||||||| |||||||| || | ||| ||||| | | |||||| Sbjct: 385 ttcaaaaccttcttcacaatcttttgctcctccacaaggaaggcacgaatgattctttcc 326 Query: 255 ctcactgcagttccagagagcactccaccatagggacggttcacagtcctgcggttccta 314 || || |||| ||||| | || |||||||| | ||||||||| ||||| | ||| || Sbjct: 325 ctaacagcagaaccagacaaaaccccaccataagcacggttcacggtcctcctgtttctt 266 Query: 315 gacagccttgatcttttgtattcagtaggcctgaggtggggaataccctg 364 || | | ||| || ||||| ||||| ||||| | ||| ||||||||||| Sbjct: 265 gataaacgtgacctcttgtactcagttggcctcaagtgaggaataccctg 216
>gb|U10047.1|PSU10047 Pisum sativum ribosomal protein L34 homolog (RPL34) mRNA, complete cds Length = 494 Score = 50.1 bits (25), Expect = 0.008 Identities = 61/74 (82%) Strand = Plus / Minus Query: 183 gtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacgg 242 ||||||||||| ||||| || ||||| ||||| || ||||| ||||| | ||||||||| Sbjct: 355 gtcttctgtatcttcaaaactttcttaacaattttttgctcttcaacaaggaaagcacga 296 Query: 243 ntnntcctttccct 256 | |||||||||| Sbjct: 295 ataatcctttccct 282 Score = 46.1 bits (23), Expect = 0.12 Identities = 68/83 (81%) Strand = Plus / Minus Query: 330 ttgtattcagtaggcctgaggtggggaataccctggatcttcttcccggtcacagggcac 389 |||||||||||||| || | || ||||| || |||||| |||| || || ||||| ||| Sbjct: 208 ttgtattcagtaggtctcaaatgtggaatcccttggatcctctttccagtaacaggacac 149 Query: 390 ttggggccgctcgccctcttctt 412 || || || |||||||||||||| Sbjct: 148 ttaggtccactcgccctcttctt 126
>gb|AC149288.1| Solanum demissum chromosome 5 clone PGEC446J10 map MAP_LOC, complete sequence Length = 102692 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 177 tccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaa 232 ||||||| ||||| || ||||| ||||||||||||||||| || || |||||||| Sbjct: 95543 tccttggctttctggatcttcaaaaccttcttcacaatcttttgttcttcaaccaa 95598 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 ccaccatagggacggttcacagtcct 304 |||||||||| ||||||||||||||| Sbjct: 95733 ccaccataggcacggttcacagtcct 95758
>gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2, complete sequence Length = 81567 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 177 tccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaa 232 ||||||| ||||| || ||||| ||||||||||||||||| || || |||||||| Sbjct: 47927 tccttggctttctggatcttcaaaaccttcttcacaatcttttgttcttcaaccaa 47982 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 ccaccatagggacggttcacagtcct 304 |||||||||| ||||||||||||||| Sbjct: 48117 ccaccataggcacggttcacagtcct 48142
>emb|BX814692.1|CNS0ADOU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB89ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 518 Score = 48.1 bits (24), Expect = 0.031 Identities = 87/109 (79%) Strand = Plus / Minus Query: 196 tcaacaccttcttcacaatcttctgctcctcaaccaagaaagcacggntnntcctttccc 255 ||||||| ||||| |||||||| ||||| || || | ||| || || | ||||||||| Sbjct: 333 tcaacactttctttacaatcttttgctcttcgacaaggaatgcccgaatgatcctttccc 274 Query: 256 tcactgcagttccagagagcactccaccatagggacggttcacagtcct 304 ||||||||| ||||| | |||||||| || | |||||||||||||| Sbjct: 273 tcactgcagaaccagacaagactccaccgtatgctcggttcacagtcct 225
>gb|AC013289.11|AC013289 Arabidopsis thaliana chromosome 1 BAC T6C23 genomic sequence, complete sequence Length = 87148 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 195 ttcaacaccttcttcacaatcttctgctcctc 226 ||||| ||||||||||||||||| |||||||| Sbjct: 79858 ttcaaaaccttcttcacaatcttttgctcctc 79889
>gb|AC021046.2|AC021046 Arabidopsis thaliana chromosome 1 BAC F24J1 genomic sequence, complete sequence Length = 44430 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 195 ttcaacaccttcttcacaatcttctgctcctc 226 ||||| ||||||||||||||||| |||||||| Sbjct: 9792 ttcaaaaccttcttcacaatcttttgctcctc 9823
>dbj|AK062367.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-H12, full insert sequence Length = 472 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 429 agcttgccacctggggtcttgacgacc 455 ||||||||||| ||||||||||||||| Sbjct: 145 agcttgccaccaggggtcttgacgacc 119 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 200 caccttcttcacaatcttctgctcctcaa 228 ||||||||| || |||||||||||||||| Sbjct: 368 caccttcttgacgatcttctgctcctcaa 340
>gb|AY961475.1| Phytophthora infestans clone MY-23-A-10 ribosomal protein L34 mRNA, complete cds Length = 515 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 200 caccttcttcacaatcttctgctcctcaaccaagaaagc 238 ||||||||| || |||||||||||||||| || |||||| Sbjct: 354 caccttcttaacgatcttctgctcctcaatcaggaaagc 316 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 407 cttcttggtgtactggtacacgagcttgccacctggggtcttgac 451 ||||||| |||||||| || ||||||||||| ||||||||||| Sbjct: 153 cttcttgatgtactgggcgacaagcttgccaccaggggtcttgac 109
>ref|NM_102452.3| Arabidopsis thaliana structural constituent of ribosome AT1G26880 mRNA, complete cds Length = 668 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 194 tttcaacaccttcttcacaatcttctgctc 223 ||||||||| |||||||||||||| ||||| Sbjct: 372 tttcaacactttcttcacaatcttttgctc 343
>ref|NM_032975.2| Homo sapiens dystrobrevin, alpha (DTNA), transcript variant 2, mRNA Length = 6072 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 334 attcagtaggcctgaggtgggg 355 |||||||||||||||||||||| Sbjct: 3986 attcagtaggcctgaggtgggg 3965
>ref|NM_001390.3| Homo sapiens dystrobrevin, alpha (DTNA), transcript variant 1, mRNA Length = 6166 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 334 attcagtaggcctgaggtgggg 355 |||||||||||||||||||||| Sbjct: 4080 attcagtaggcctgaggtgggg 4059
>ref|NM_032980.2| Homo sapiens dystrobrevin, alpha (DTNA), transcript variant 6, mRNA Length = 5221 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 334 attcagtaggcctgaggtgggg 355 |||||||||||||||||||||| Sbjct: 3135 attcagtaggcctgaggtgggg 3114
>ref|XM_420489.1| PREDICTED: Gallus gallus similar to ribosomal protein L34; 60S ribosomal protein L34 (LOC422526), mRNA Length = 899 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaa 228 |||||||||||| ||||||||||||||||||| Sbjct: 826 ttcaacaccttcacaacaatcttctgctcctcaa 793
>ref|XM_958025.1| Neurospora crassa OR74A hypothetical protein ( (AF378548) ribosomal protein L34-like protein [Ophiostoma novo-ulmi] ) (NCU07857.1) partial mRNA Length = 354 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 201 accttcttcacaatcttctgctcctcaaccaagaaagcacgg 242 |||||||| || |||||||||||||||| | |||||||||| Sbjct: 314 accttcttgacgatcttctgctcctcaatgaggaaagcacgg 273
>ref|XM_328562.1| Neurospora crassa OR74A hypothetical protein ( (AF378548) ribosomal protein L34-like protein [Ophiostoma novo-ulmi] ) (NCU07857.1) partial mRNA Length = 354 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 201 accttcttcacaatcttctgctcctcaaccaagaaagcacgg 242 |||||||| || |||||||||||||||| | |||||||||| Sbjct: 314 accttcttgacgatcttctgctcctcaatgaggaaagcacgg 273
>ref|XM_657034.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4522.2), mRNA Length = 351 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 200 caccttcttcacaatcttctgctcctcaaccaagaaagcacg 241 ||||||||| || |||||||||||||| | || ||||||||| Sbjct: 315 caccttcttgacgatcttctgctcctcgatcaggaaagcacg 274
>ref|XM_744346.1| Aspergillus fumigatus Af293 ribosomal protein L34 protein (Afu2g03040) partial mRNA Length = 579 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 201 accttcttcacaatcttctgctcctcaaccaagaaagcacgg 242 |||||||| || || ||||||||||||| || |||||||||| Sbjct: 539 accttcttgacgattttctgctcctcaatcaggaaagcacgg 498
>emb|AL589923.11| Human DNA sequence from clone RP11-374O2 on chromosome 9 Contains part of a novel gene, complete sequence Length = 104685 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 247 tcctttccctcactgcagttcc 268 |||||||||||||||||||||| Sbjct: 71854 tcctttccctcactgcagttcc 71833
>gb|AY117327.1| Arabidopsis thaliana putative 60S ribosomal protein L34 (At1g26880) mRNA, complete cds Length = 394 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 194 tttcaacaccttcttcacaatcttctgctc 223 ||||||||| |||||||||||||| ||||| Sbjct: 324 tttcaacactttcttcacaatcttttgctc 295
>gb|AY080712.1| Arabidopsis thaliana putative 60s ribosomal protein L34 (At1g26880) mRNA, complete cds Length = 653 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 194 tttcaacaccttcttcacaatcttctgctc 223 ||||||||| |||||||||||||| ||||| Sbjct: 345 tttcaacactttcttcacaatcttttgctc 316
>gb|AC068506.10| Homo sapiens chromosome 18, clone RP11-96A15, complete sequence Length = 175885 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 334 attcagtaggcctgaggtgggg 355 |||||||||||||||||||||| Sbjct: 50528 attcagtaggcctgaggtgggg 50549
>dbj|AB226191.1| Aspergillus oryzae cDNA, contig sequence: AoEST3050 Length = 605 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 201 accttcttcacaatcttctgctcctcaaccaagaaagcacgg 242 |||||||| || |||||||||||||| | || |||||||||| Sbjct: 388 accttcttgacgatcttctgctcctcgatcaggaaagcacgg 347
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Minus Query: 201 accttcttcacaatcttctgctcctcaaccaagaaagcacgg 242 |||||||| || |||||||||||||| | || |||||||||| Sbjct: 1807889 accttcttgacgatcttctgctcctcgatcaggaaagcacgg 1807848
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 201 accttcttcacaatcttctgctcctcaaccaagaaagc 238 |||||||| || |||||||||||||| | ||||||||| Sbjct: 548765 accttcttgacgatcttctgctcctcgatcaagaaagc 548802
>gb|DQ066310.1| Ixodes scapularis isolate IS-6-12L-37 ribosomal protein L34 mRNA, complete cds Length = 360 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 209 cacaatcttctgctcctcaaccaagaaagc 238 |||||||||||||||||||| || |||||| Sbjct: 303 cacaatcttctgctcctcaatcaggaaagc 274
>gb|AC022166.7| Homo sapiens chromosome 16 clone RP11-525K10, complete sequence Length = 163998 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 gtccttggtcttctgtattttc 197 |||||||||||||||||||||| Sbjct: 161309 gtccttggtcttctgtattttc 161288
>emb|CR338843.2| Gallus gallus finished cDNA, clone ChEST69d4 Length = 1011 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaa 228 |||||||||||| ||||||||||||||||||| Sbjct: 938 ttcaacaccttcacaacaatcttctgctcctcaa 905
>gb|AC108483.3| Homo sapiens chromosome 16 clone RP11-170P24, complete sequence Length = 163976 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 176 gtccttggtcttctgtattttc 197 |||||||||||||||||||||| Sbjct: 115953 gtccttggtcttctgtattttc 115974
>emb|BX950575.1| Gallus gallus finished cDNA, clone ChEST566l24 Length = 665 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaa 228 |||||||||||| ||||||||||||||||||| Sbjct: 592 ttcaacaccttcacaacaatcttctgctcctcaa 559
>emb|BX814361.1|CNS0AEHP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB6ZD07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 628 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 194 tttcaacaccttcttcacaatcttctgctc 223 ||||||||| |||||||||||||| ||||| Sbjct: 332 tttcaacactttcttcacaatcttttgctc 303
>emb|BX932642.1| Gallus gallus finished cDNA, clone ChEST494g15 Length = 903 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaa 228 |||||||||||| ||||||||||||||||||| Sbjct: 827 ttcaacaccttcacaacaatcttctgctcctcaa 794
>emb|BX931507.1| Gallus gallus finished cDNA, clone ChEST391o10 Length = 866 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaa 228 |||||||||||| ||||||||||||||||||| Sbjct: 814 ttcaacaccttcacaacaatcttctgctcctcaa 781
>gb|AC009277.4|AC009277 Homo sapiens chromosome 18, clone RP11-481E24, complete sequence Length = 160401 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 334 attcagtaggcctgaggtgggg 355 |||||||||||||||||||||| Sbjct: 136617 attcagtaggcctgaggtgggg 136638
>gb|AY088495.1| Arabidopsis thaliana clone 7182 mRNA, complete sequence Length = 515 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 194 tttcaacaccttcttcacaatcttctgctc 223 ||||||||| |||||||||||||| ||||| Sbjct: 373 tttcaacactttcttcacaatcttttgctc 344
>ref|NM_209371.1| Eremothecium gossypii ADL078Cp (ADL078C), mRNA Length = 381 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 201 accttcttcacaatcttctgctcctcaaccaagaaagc 238 |||||||| || |||||||||||||| | ||||||||| Sbjct: 311 accttcttgacgatcttctgctcctcgatcaagaaagc 274
>gb|AC005508.1|AC005508 Arabidopsis thaliana chromosome I BAC T2P11 genomic sequence, complete sequence Length = 85372 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 194 tttcaacaccttcttcacaatcttctgctc 223 ||||||||| |||||||||||||| ||||| Sbjct: 23592 tttcaacactttcttcacaatcttttgctc 23621
>dbj|AB209102.1| Homo sapiens mRNA for dystrobrevin alpha isoform 2 variant protein Length = 6015 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 334 attcagtaggcctgaggtgggg 355 |||||||||||||||||||||| Sbjct: 3954 attcagtaggcctgaggtgggg 3933
>emb|AL833285.1|HSM804598 Homo sapiens mRNA; cDNA DKFZp451O128 (from clone DKFZp451O128) Length = 6066 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 334 attcagtaggcctgaggtgggg 355 |||||||||||||||||||||| Sbjct: 3980 attcagtaggcctgaggtgggg 3959
>ref|XM_461331.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F24167g) partial mRNA Length = 369 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 ccacctggggtcttgacgacc 455 ||||||||||||||||||||| Sbjct: 83 ccacctggggtcttgacgacc 63
>emb|AL136096.7| Human DNA sequence from clone RP1-23D17 on chromosome 6q15-16.2 Contains the SPACA1 gene for sperm acrosome associated 1, part of the CNR1 gene for cannabinoid receptor 1 (brain) and a CpG island, complete sequence Length = 112212 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 248 cctttccctcactgcagttcc 268 ||||||||||||||||||||| Sbjct: 68141 cctttccctcactgcagttcc 68161
>ref|XM_792139.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9354-PA, isoform A (LOC592626), mRNA Length = 513 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 213 atcttctgctcctcaaccaagaaagcacg 241 |||||||||||||| | |||||||||||| Sbjct: 335 atcttctgctcctcgatcaagaaagcacg 307
>emb|AL031622.1|HS740A11 Human DNA sequence from clone RP4-740A11 on chromosome Xq22.2-23 Contains part of the COL4A5 gene for type IV alpha 5 collagen (Alport syndrome), complete sequence Length = 104674 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 aaaaatattttccttgtttac 119 ||||||||||||||||||||| Sbjct: 97452 aaaaatattttccttgtttac 97472
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 ccacctggggtcttgacgacc 455 ||||||||||||||||||||| Sbjct: 1919187 ccacctggggtcttgacgacc 1919207
>emb|BX825288.1|CNS0A6GY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL27ZA02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 565 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaaccaagaa 235 ||||| |||||||| ||| ||||||| || ||||||||||| Sbjct: 347 ttcaaaaccttcttaacagtcttctgttcttcaaccaagaa 307
>gb|AC097506.3| Homo sapiens BAC clone RP11-366P6 from 2, complete sequence Length = 43657 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 ccaacaaaaatattttccttgttta 118 |||| |||||||||||||||||||| Sbjct: 39526 ccaagaaaaatattttccttgttta 39550
>gb|AY168761.1| Branchiostoma belcheri tsingtaunese ribosomal protein L34 mRNA, complete cds Length = 466 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 209 cacaatcttctgctcctcaaccaagaaagcacg 241 |||||||||||| ||||||| || ||||||||| Sbjct: 336 cacaatcttctgttcctcaatcaggaaagcacg 304
>gb|AY909414.1| Siniperca chuatsi clone C46 60S ribosomal protein L34 mRNA, partial cds Length = 294 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 213 atcttctgctcctcaaccaagaaagcacg 241 |||||||||||||||| || ||||||||| Sbjct: 205 atcttctgctcctcaatcaggaaagcacg 177
>gb|AC024910.5| Homo sapiens chromosome 3 clone RP11-380A22 map 3p, complete sequence Length = 207606 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 attcagtaggcctgaggtggg 354 ||||||||||||||||||||| Sbjct: 5121 attcagtaggcctgaggtggg 5141
>gb|AC066580.4| Homo sapiens chromosome 3 clone RP11-109J15 map 3p, complete sequence Length = 149252 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 attcagtaggcctgaggtggg 354 ||||||||||||||||||||| Sbjct: 102085 attcagtaggcctgaggtggg 102065
>ref|NM_197162.1| Oryza sativa (japonica cultivar-group) putative zinc finger protein (OSJNBa0066I08.3), mRNA Length = 2010 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 cgtcgtctccgccgccggca 542 |||||||||||||||||||| Sbjct: 758 cgtcgtctccgccgccggca 777
>gb|AC092387.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1004_F02 map C8, complete sequence Length = 116304 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 ccgtcgtctccgccgccggc 541 |||||||||||||||||||| Sbjct: 75977 ccgtcgtctccgccgccggc 75958
>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0073M15, complete sequence Length = 143071 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 gtcgtctccgccgccggcag 543 |||||||||||||||||||| Sbjct: 56029 gtcgtctccgccgccggcag 56048
>gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 genomic sequence, complete sequence Length = 121915 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Minus Query: 177 tccttggtcttctgtattttcaacaccttcttcacaatcttctgctcctcaaccaa 232 ||||||| ||||| || ||||| |||||||||||||| || || || |||||||| Sbjct: 102756 tccttggctttctggatcttcaaaaccttcttcacaattttttgttcttcaaccaa 102701
>ref|XM_381604.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01428.1) partial mRNA Length = 1878 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 gggacggttcacagtcctgc 306 |||||||||||||||||||| Sbjct: 55 gggacggttcacagtcctgc 74
>gb|AC012061.4| Homo sapiens BAC clone CTD-2052D1 from 7, complete sequence Length = 81670 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 aaaaatattttccttgttta 118 |||||||||||||||||||| Sbjct: 43436 aaaaatattttccttgttta 43455
>emb|AL445240.8| Human DNA sequence from clone RP11-242A15 on chromosome 10 Contains the 5' end of a novel gene, complete sequence Length = 152898 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 aacaaaaatattttccttgt 115 |||||||||||||||||||| Sbjct: 143936 aacaaaaatattttccttgt 143917
>emb|AL359208.14| Human DNA sequence from clone RP11-320N6 on chromosome 13, complete sequence Length = 139649 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 attcagtaggcctgaggtgg 353 |||||||||||||||||||| Sbjct: 57962 attcagtaggcctgaggtgg 57943
>emb|AL157766.9| Human DNA sequence from clone RP11-40O20 on chromosome 13q12.11-12.2 Contains the 3' end of the SGCG gene for sarcoglycan gamma (35kD dystrophin-associated glycoprotein), the SACS gene for spastic ataxia of Charlevoix-Saguenay (sacsin), a ribosomal protein large P1 (RPLP1) pseudogene and a CpG island, complete sequence Length = 92693 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ccaccaacaaaaatattttc 110 |||||||||||||||||||| Sbjct: 29408 ccaccaacaaaaatattttc 29427
>gb|AC092489.4| Oryza sativa chromosome 10 BAC OSJNBa0066I08 genomic sequence, complete sequence Length = 25375 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 cgtcgtctccgccgccggca 542 |||||||||||||||||||| Sbjct: 9299 cgtcgtctccgccgccggca 9280
>emb|AL391069.11| Human DNA sequence from clone RP11-126K1 on chromosome 1 Contains the 3' end of the PSMD4 gene for proteasome (prosome, macropain) 26S subunit non-ATPase 4, two novel genes, gene KIAA1441 (FLJ13043), the PIK4CB genen for phosphatidylinositol 4-kinase catalytic beta polypeptide, the RFX5 gene for regulatory factor X 5 (influences HLA class II expression), the SELENBP1 gene for selenium binding protein 1 and two CpG islands, complete sequence Length = 121357 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 ctgtattttcaacaccttcttcac 211 |||||||||||||| ||||||||| Sbjct: 84057 ctgtattttcaacagcttcttcac 84034
>gb|AC091175.11| Homo sapiens chromosome 8, clone RP11-146E23, complete sequence Length = 84551 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 aaatattttccttgtttaca 120 |||||||||||||||||||| Sbjct: 13826 aaatattttccttgtttaca 13845
>gb|AC118480.3| Homo sapiens BAC clone RP11-393K13 from 4, complete sequence Length = 108490 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 tattttcaacaccttcttca 210 |||||||||||||||||||| Sbjct: 74505 tattttcaacaccttcttca 74524
>gb|AC025479.8| Homo sapiens chromosome 8, clone RP11-358J8, complete sequence Length = 176647 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tttcaaacagattactttga 166 |||||||||||||||||||| Sbjct: 38735 tttcaaacagattactttga 38754
>gb|AC092172.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0014J14, complete sequence Length = 191397 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 ccgtcgtctccgccgccggc 541 |||||||||||||||||||| Sbjct: 44717 ccgtcgtctccgccgccggc 44698
>gb|AC093876.3| Homo sapiens BAC clone RP11-631I21 from 4, complete sequence Length = 183972 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 aaaaatattttccttgttta 118 |||||||||||||||||||| Sbjct: 66451 aaaaatattttccttgttta 66432
>gb|AC097712.3| Homo sapiens BAC clone RP11-216H12 from 4, complete sequence Length = 184520 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ccaccaacaaaaatattttc 110 |||||||||||||||||||| Sbjct: 65418 ccaccaacaaaaatattttc 65437
>ref|XM_683014.1| PREDICTED: Danio rerio similar to superkiller viralicidic activity 2-like (LOC559653), mRNA Length = 3231 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 ttctgctcctcaaccaagaa 235 |||||||||||||||||||| Sbjct: 35 ttctgctcctcaaccaagaa 54
>gb|AC068399.9| Homo sapiens chromosome 8, clone RP11-809K10, complete sequence Length = 195367 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tttcaaacagattactttga 166 |||||||||||||||||||| Sbjct: 179290 tttcaaacagattactttga 179309
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 cgtcgtctccgccgccggca 542 |||||||||||||||||||| Sbjct: 18358708 cgtcgtctccgccgccggca 18358689 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 ccgtcgtctccgccgccggc 541 |||||||||||||||||||| Sbjct: 7219359 ccgtcgtctccgccgccggc 7219340
>gb|AF287343.1|AF287343 Fuchsia hybrid cultivar Qiu 94208 ribosomal protein S10 mRNA, partial cds; nuclear gene for mitochondrial product Length = 407 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 ccttcttcacaatcttctgctcct 225 |||||||||| ||||||||||||| Sbjct: 232 ccttcttcaccatcttctgctcct 209
>gb|AF401588.1| Ictalurus punctatus ribosomal protein L34 mRNA, complete cds Length = 408 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 210 acaatcttctgctcctcaaccaagaaagcacg 241 ||||||||||||||||||| | ||||||||| Sbjct: 324 acaatcttctgctcctcaataaggaaagcacg 293
>gb|AC136977.4| Homo sapiens 12 BAC RP11-439H13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 33795 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 aaaaatattttccttgttta 118 |||||||||||||||||||| Sbjct: 15867 aaaaatattttccttgttta 15886
>gb|AC161614.4| Pan troglodytes BAC clone CH251-575E11 from chromosome unknown, complete sequence Length = 172771 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 ctgtattttcaacaccttcttcac 211 |||||||||||||| ||||||||| Sbjct: 138439 ctgtattttcaacagcttcttcac 138462
>dbj|AK109091.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-A04, full insert sequence Length = 1381 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 cgtcgtctccgccgccggca 542 |||||||||||||||||||| Sbjct: 325 cgtcgtctccgccgccggca 344
>dbj|AK070563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060H13, full insert sequence Length = 1406 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 cgtcgtctccgccgccggca 542 |||||||||||||||||||| Sbjct: 326 cgtcgtctccgccgccggca 345
>dbj|AP005366.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB565H3, complete sequence Length = 101002 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tttcaaacagattactttga 166 |||||||||||||||||||| Sbjct: 54495 tttcaaacagattactttga 54476
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 cgtcgtctccgccgccggca 542 |||||||||||||||||||| Sbjct: 18368761 cgtcgtctccgccgccggca 18368742 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 ccgtcgtctccgccgccggc 541 |||||||||||||||||||| Sbjct: 7222655 ccgtcgtctccgccgccggc 7222636
>gb|AF061604.1|AF061604 Pichia angusta ubiquitin-conjugating enzyme homolog peroxin 4 (PEX4) gene, complete cds Length = 1507 Score = 40.1 bits (20), Expect = 7.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 195 ttcaacaccttcttcacaatcttctgctcctcaaccaagaaagc 238 |||||||||||||| || ||||| || || |||| ||||||||| Sbjct: 1122 ttcaacaccttcttgacgatcttttgttcttcaatcaagaaagc 1165
>emb|BX510319.11| Zebrafish DNA sequence from clone CH211-221E5 in linkage group 8, complete sequence Length = 113234 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 caaaaatattttccttgttt 117 |||||||||||||||||||| Sbjct: 17524 caaaaatattttccttgttt 17505
>emb|AL732615.15| Mouse DNA sequence from clone RP23-190O8 on chromosome 4, complete sequence Length = 189819 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ttcccggtcacagggcactt 391 |||||||||||||||||||| Sbjct: 110565 ttcccggtcacagggcactt 110546 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,256,015 Number of Sequences: 3902068 Number of extensions: 5256015 Number of successful extensions: 111234 Number of sequences better than 10.0: 131 Number of HSP's better than 10.0 without gapping: 134 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 110663 Number of HSP's gapped (non-prelim): 561 length of query: 561 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 538 effective length of database: 17,143,297,704 effective search space: 9223094164752 effective search space used: 9223094164752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
