Clone Name	rbags27h17
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AY100481.1| Zea mays nucleosome/chromatin assembly factor gro...	444	e-121
2	dbj|AK111794.1| Oryza sativa (japonica cultivar-group) cDNA clon...	426	e-116
3	gb|AF250047.1|AF250047 Zea mays WD-repeat protein RBAP1 (rbap1) ...	408	e-111
4	gb|AF384037.1| Zea mays nucleosome/chromatin assembly factor C (...	400	e-108
5	ref|NM_191696.1| Oryza sativa (japonica cultivar-group), predic...	398	e-108
6	gb|AY109354.1| Zea mays CL199_1 mRNA sequence	258	2e-65
7	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	123	8e-25
8	dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic D...	123	8e-25
9	ref|NM_127510.3| Arabidopsis thaliana FVE (FVE) AT2G19520 (FVE) ...	121	3e-24
10	gb|AF498102.1| Arabidopsis thaliana MSI4 (FVE) mRNA, complete cds	121	3e-24
11	gb|AY081447.1| Arabidopsis thaliana putative WD-40 repeat protei...	121	3e-24
12	gb|AY059799.1| Arabidopsis thaliana putative WD-40 repeat protei...	121	3e-24
13	gb|AY057655.1| Arabidopsis thaliana At2g19520/F3P11.12 mRNA, com...	121	3e-24
14	gb|AF028711.1|AF028711 Arabidopsis thaliana WD-40 repeat protein...	121	3e-24
15	gb|AY830931.1| Pisum sativum FVE (FVE) mRNA, complete cds	113	8e-22
16	ref|NM_119118.2| Arabidopsis thaliana MSI5 AT4G29730 (MSI5) mRNA...	100	1e-17
17	gb|BT010610.1| Arabidopsis thaliana At4g29730 gene, complete cds	100	1e-17
18	dbj|AK176425.1| Arabidopsis thaliana mRNA for WD-40 repeat-like ...	100	1e-17
19	gb|AY849994.1| Arabidopsis thaliana ecotype Lz-0 FVE (FVE) gene,...	82	3e-12
20	gb|AF498101.1| Arabidopsis thaliana MSI4 (FVE) gene, complete cds	80	1e-11
21	gb|AC005917.3| Arabidopsis thaliana chromosome 2 clone F3P11 map...	80	1e-11
22	gb|AC127170.11| Medicago truncatula clone mth2-35d10, complete s...	74	7e-10
23	gb|AC160012.1| Medicago truncatula chromosome 2 BAC clone mth2-1...	74	7e-10
24	emb|AL079344.1|ATT16L4 Arabidopsis thaliana DNA chromosome 4, BA...	68	4e-08
25	emb|AL161575.2|ATCHRIV71 Arabidopsis thaliana DNA chromosome 4, ...	68	4e-08
26	gb|BT012704.1| Lycopersicon esculentum clone 113579R, mRNA sequence	60	1e-05
27	emb|AJ631222.1| Silene noctiflora partial mRNA for putative WD r...	56	2e-04
28	gb|AC155896.2| Medicago truncatula chromosome 2 BAC clone mth2-8...	56	2e-04
29	emb|AJ631221.1| Silene diclinis partial mRNA for putative WD rep...	46	0.15
30	emb|AJ631220.1| Silene diclinis partial mRNA for putative WD rep...	46	0.15
31	emb|AJ631219.1| Silene dioica partial mRNA for putative WD repea...	46	0.15
32	emb|AJ631218.1| Silene dioica partial mRNA for putative WD repea...	46	0.15
33	emb|Y18519.1|SLA18519 Silene latifolia mRNA for X1 protein	46	0.15
34	emb|Y18517.1|SLA18517 Silene latifolia mRNA for Y1 protein	46	0.15
35	gb|AC162373.11| Mus musculus chromosome 18, clone RP23-410M11, c...	42	2.3
36	gb|AC129178.4| Mus musculus BAC clone RP23-217G18 from chromosom...	42	2.3
37	gb|AF326573.1| Dengue virus type 4 strain 814669, complete genome	42	2.3
38	gb|AC124128.11| Mus musculus chromosome 6, clone RP23-158O11, co...	42	2.3
39	gb|AY243469.1| Chimeric Dengue virus vector p4(Delta30)-D2-CME, ...	42	2.3
40	gb|AY243468.1| Chimeric Dengue virus vector p4-D2-CME, complete ...	42	2.3
41	gb|AY243467.1| Chimeric Dengue virus vector p4(Delta30)-D2-ME, c...	42	2.3
42	gb|AY243466.1| Chimeric Dengue virus vector p4-D2-ME, complete s...	42	2.3
43	gb|AY376438.1| Dengue virus vector p4(Delta30), complete sequence	42	2.3
44	gb|AC164631.5| Mus musculus 6 BAC RP23-359M3 (Roswell Park Cance...	42	2.3
45	gb|AF375822.1|AF375822 Dengue virus type 4 recombinant clone 2A,...	42	2.3
46	gb|AF326827.1| Dengue virus type 4 recombinant clone rDEN4del30,...	42	2.3
47	gb|AF326826.1| Dengue virus type 4 recombinant clone 2Adel30, co...	42	2.3
48	gb|AF326825.1| Dengue virus type 4 recombinant clone rDEN4, comp...	42	2.3
49	gb|M14931.2|DENSTRA Dengue virus type 4 polyprotein precursor, g...	42	2.3
50	gb|AY656168.1| Chimeric dengue virus vector p4(delta30)-D3L-ME, ...	42	2.3
51	gb|AY656167.1| Chimeric dengue virus vector p4-D3L-ME, complete ...	42	2.3
52	gb|AY648301.1| Dengue virus type 4 vector p4, complete sequence	42	2.3
53	gb|AE017131.1| Yersinia pestis biovar Medievalis str. 91001 sect...	40	9.2
54	gb|AE009952.1| Yersinia pestis KIM, complete genome	40	9.2
55	gb|AC122896.4| Mus musculus BAC clone RP23-69N8 from chromosome ...	40	9.2
56	gb|AC131114.3| Mus musculus BAC clone RP24-212G16 from chromosom...	40	9.2
57	gb|AC113589.13| Mus musculus chromosome 9, clone RP23-257A19, co...	40	9.2
58	gb|AC133523.3| Mus musculus BAC clone RP23-34E20 from 19, comple...	40	9.2
59	emb|AL451146.7| Human DNA sequence from clone RP11-510K18 on chr...	40	9.2
60	ref|XM_966068.1| PREDICTED: Tribolium castaneum similar to RNA t...	40	9.2
61	emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp...	40	9.2
62	emb|AJ414147.1| Yersinia pestis strain CO92 complete genome; seg...	40	9.2
63	gb|AC150419.2| Branchiostoma floridae clone CH302-73J11, complet...	40	9.2
64	gb|AY096002.1| Mus musculus NADH dehydrogenase:ubiquinone Fe-S p...	40	9.2
65	gb|AC100826.2| Homo sapiens chromosome 15, clone RP11-279F6, com...	40	9.2
66	gb|AY084042.1| Silene flos-jovis XY1 protein gene, partial cds	40	9.2
67	gb|AY082378.1| Silene conica SlX1-like protein mRNA, partial cds	40	9.2
68	gb|AC011402.9| Homo sapiens chromosome 5 clone CTB-38B5, complet...	40	9.2
69	gb|AC011370.4| Homo sapiens chromosome 5 clone CTB-107A22, compl...	40	9.2
70	gb|AC160964.1| Mus musculus BAC clone RP24-316G24 from chromosom...	40	9.2
71	emb|AL929240.18| Mouse DNA sequence from clone RP23-245A10 on ch...	40	9.2
72	gb|AC167669.1| Mus musculus BAC clone RP24-138L8 from chromosome...	40	9.2
73	gb|AC079444.28| Mus musculus strain C57BL/6J chromosome 10 clone...	40	9.2
74	gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome	40	9.2
75	emb|AL807828.14| Mouse DNA sequence from clone RP23-184N11 on ch...	40	9.2
76	gb|AC131692.5| Mus musculus BAC clone RP23-391B20 from 19, compl...	40	9.2
77	gb|DQ250682.1| Ipomoea nil FVE mRNA, partial cds	40	9.2
78	gb|AC009677.21| Homo sapiens chromosome 15, clone RP11-54P21, co...	40	9.2
79	gb|AC090503.12| Homo sapiens 12q BAC RP11-314D7 (Roswell Park Ca...	40	9.2

---

>gb|AY100481.1| Zea mays nucleosome/chromatin assembly factor group C (nfc101) mRNA,
            complete cds
          Length = 1788

 Score =  444 bits (224), Expect = e-121
 Identities = 341/380 (89%)
 Strand = Plus / Minus

                                                                        
Query: 294  cctcggagtgcagctggccaagtgagacttgaaggtctccagctctgaaagaacctcgtc 353
            |||||||| ||| ||||||| ||||| ||||||  |||||||||||| |||||| || ||
Sbjct: 1507 cctcggagcgcaactggccaggtgagccttgaaattctccagctctgtaagaacttcatc 1448

                                                                        
Query: 354  ctctgggcggtagatcaaatcactcatacgccatatctgcaaagttccacctccaccggt 413
            ||||||||||||||||||||||||||| |||||||||||||  |||||||||||||| ||
Sbjct: 1447 ctctgggcggtagatcaaatcactcattcgccatatctgcagtgttccacctccaccagt 1388

                                                                        
Query: 414  gctctcaccatcatcagatacactcacaatggtccaagggtctgatgagttccagtggaa 473
            ||||||||||||||| || ||||| ||||| |||||||| ||||| || |||||||||||
Sbjct: 1387 gctctcaccatcatctgagacactgacaattgtccaaggatctgacgaattccagtggaa 1328

                                                                        
Query: 474  atctacaatcttatccctatgacctgcatgttgaaagaaaagcccaccaggcgaattggg 533
             ||||| ||||||||||||||||| ||||| ||||||||||||||| | ||   ||| | 
Sbjct: 1327 gtctacgatcttatccctatgaccagcatgctgaaagaaaagcccagctgggacattaga 1268

                                                                        
Query: 534  atttttcttctttccaaccttctcatggtcccacacatttaagaaaccatcttctgcaga 593
            |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1267 atttttcttcttcccaaccttctcatggtcccaaacatttaagaaaccatcttctgcaga 1208

                                                                        
Query: 594  gcttccgaaaacagatgctttgtcaggagaccactgaacacaaaggacggcagctttatg 653
             ||||| |||||||||||| ||||||| ||||||||||||||||| || |||||||||||
Sbjct: 1207 acttccaaaaacagatgctctgtcaggtgaccactgaacacaaagaacagcagctttatg 1148

                                
Query: 654  gccctcaaatttgtgaattg 673
            ||||||||||||||||||||
Sbjct: 1147 gccctcaaatttgtgaattg 1128

---

>dbj|AK111794.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023104J19, full
            insert sequence
          Length = 1840

 Score =  426 bits (215), Expect = e-116
 Identities = 329/367 (89%)
 Strand = Plus / Minus

                                                                        
Query: 304  cagctggccaagtgagacttgaaggtctccagctctgaaagaacctcgtcctctgggcgg 363
            |||||||||||||||| ||||||| |||||||||||| |||||| || || ||||| |||
Sbjct: 1516 cagctggccaagtgagtcttgaagttctccagctctgcaagaacttcatcttctggacgg 1457

                                                                        
Query: 364  tagatcaaatcactcatacgccatatctgcaaagttccacctccaccggtgctctcacca 423
            || ||||  |||||||| |||||||||||||| |||||||||||||| || |||||||||
Sbjct: 1456 tatatcaggtcactcatgcgccatatctgcaatgttccacctccaccagtactctcacca 1397

                                                                        
Query: 424  tcatcagatacactcacaatggtccaagggtctgatgagttccagtggaaatctacaatc 483
            |||||||| ||||||||||| |||||||| || || || ||||||||||| |||||||||
Sbjct: 1396 tcatcagacacactcacaatagtccaaggatccgaagaattccagtggaagtctacaatc 1337

                                                                        
Query: 484  ttatccctatgacctgcatgttgaaagaaaagcccaccaggcgaattgggatttttcttc 543
            |||||||||||||| ||||||||||||||||||||| |||| |  |||||||||||||| 
Sbjct: 1336 ttatccctatgaccagcatgttgaaagaaaagcccagcaggtgcgttgggatttttctta 1277

                                                                        
Query: 544  tttccaaccttctcatggtcccacacatttaagaaaccatcttctgcagagcttccgaaa 603
            ||||||||||||||||| ||||||||||||||||| || ||||| ||||||||||| || 
Sbjct: 1276 tttccaaccttctcatgatcccacacatttaagaagccgtcttccgcagagcttccaaat 1217

                                                                        
Query: 604  acagatgctttgtcaggagaccactgaacacaaaggacggcagctttatggccctcaaat 663
            |||||||| |||||||| ||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 1216 acagatgccttgtcaggtgaccactgaacacaaagaacagcagctttatgaccctcaaat 1157

                   
Query: 664  ttgtgaa 670
            |||||||
Sbjct: 1156 ttgtgaa 1150

---

>gb|AF250047.1|AF250047 Zea mays WD-repeat protein RBAP1 (rbap1) mRNA, complete cds
          Length = 1777

 Score =  408 bits (206), Expect = e-111
 Identities = 329/370 (88%)
 Strand = Plus / Minus

                                                                        
Query: 304  cagctggccaagtgagacttgaaggtctccagctctgaaagaacctcgtcctctgggcgg 363
            |||||||||||||||| ||||||  |||||||||||| |||||| || ||||||||||||
Sbjct: 1652 cagctggccaagtgagccttgaaattctccagctctgcaagaacttcatcctctgggcgg 1593

                                                                        
Query: 364  tagatcaaatcactcatacgccatatctgcaaagttccacctccaccggtgctctcacca 423
            ||||||||||||||||| ||||| |||||||  |||||||||||||| |||||||| |||
Sbjct: 1592 tagatcaaatcactcatgcgccaaatctgcagtgttccacctccaccagtgctctcgcca 1533

                                                                        
Query: 424  tcatcagatacactcacaatggtccaagggtctgatgagttccagtggaaatctacaatc 483
            |||||||| ||||| ||||| |||||||| ||||| || ||||||||||| |||||||||
Sbjct: 1532 tcatcagagacactgacaattgtccaaggatctgacgaattccagtggaagtctacaatc 1473

                                                                        
Query: 484  ttatccctatgacctgcatgttgaaagaaaagcccaccaggcgaattgggatttttcttc 543
            |||||||||||||| || || ||||||||||||||  | ||   ||| | ||||||||||
Sbjct: 1472 ttatccctatgaccagcgtgctgaaagaaaagcccggctgggacattagaatttttcttc 1413

                                                                        
Query: 544  tttccaaccttctcatggtcccacacatttaagaaaccatcttctgcagagcttccgaaa 603
            || || ||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 1412 ttccccaccttctcatgatcccacacgtttaagaaaccatcttctgcagaacttccaaaa 1353

                                                                        
Query: 604  acagatgctttgtcaggagaccactgaacacaaaggacggcagctttatggccctcaaat 663
            ||||||||| ||||||| ||||||||||||||||| || |||||||||||||| ||||||
Sbjct: 1352 acagatgctctgtcaggtgaccactgaacacaaagaacagcagctttatggccttcaaat 1293

                      
Query: 664  ttgtgaattg 673
            ||||||||||
Sbjct: 1292 ttgtgaattg 1283

---

>gb|AF384037.1| Zea mays nucleosome/chromatin assembly factor C (nfc102) mRNA,
            complete cds
          Length = 1808

 Score =  400 bits (202), Expect = e-108
 Identities = 328/370 (88%)
 Strand = Plus / Minus

                                                                        
Query: 304  cagctggccaagtgagacttgaaggtctccagctctgaaagaacctcgtcctctgggcgg 363
            ||||||||||| |||| ||||||  |||||||||||| |||||| || ||||||||||||
Sbjct: 1564 cagctggccaaatgagccttgaaattctccagctctgcaagaacttcatcctctgggcgg 1505

                                                                        
Query: 364  tagatcaaatcactcatacgccatatctgcaaagttccacctccaccggtgctctcacca 423
            ||||||||||||||||| ||||| |||||||  |||||||||||||| |||||||| |||
Sbjct: 1504 tagatcaaatcactcatgcgccaaatctgcagtgttccacctccaccagtgctctcgcca 1445

                                                                        
Query: 424  tcatcagatacactcacaatggtccaagggtctgatgagttccagtggaaatctacaatc 483
            |||||||| ||||| ||||| |||||||| ||||| || ||||||||||| |||||||||
Sbjct: 1444 tcatcagagacactgacaattgtccaaggatctgacgaattccagtggaagtctacaatc 1385

                                                                        
Query: 484  ttatccctatgacctgcatgttgaaagaaaagcccaccaggcgaattgggatttttcttc 543
            |||||||||||||| || || ||||||||||||||  | ||   ||| | ||||||||||
Sbjct: 1384 ttatccctatgaccagcgtgctgaaagaaaagcccggctgggacattagaatttttcttc 1325

                                                                        
Query: 544  tttccaaccttctcatggtcccacacatttaagaaaccatcttctgcagagcttccgaaa 603
            || || ||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 1324 ttccccaccttctcatgatcccacacgtttaagaaaccatcttctgcagaacttccaaaa 1265

                                                                        
Query: 604  acagatgctttgtcaggagaccactgaacacaaaggacggcagctttatggccctcaaat 663
            ||||||||| ||||||| ||||||||||||||||| || |||||||||||||| ||||||
Sbjct: 1264 acagatgctctgtcaggtgaccactgaacacaaagaacagcagctttatggccttcaaat 1205

                      
Query: 664  ttgtgaattg 673
            ||||||||||
Sbjct: 1204 ttgtgaattg 1195

---

>ref|NM_191696.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1362

 Score =  398 bits (201), Expect = e-108
 Identities = 326/367 (88%), Gaps = 3/367 (0%)
 Strand = Plus / Minus

                                                                        
Query: 304  cagctggccaagtgagacttgaaggtctccagctctgaaagaacctcgtcctctgggcgg 363
            |||||||||||||||| ||||||| |||||||||||| |||||| || || ||||| |||
Sbjct: 1346 cagctggccaagtgagtcttgaagttctccagctctgcaagaacttcatcttctggacgg 1287

                                                                        
Query: 364  tagatcaaatcactcatacgccatatctgcaaagttccacctccaccggtgctctcacca 423
            || ||||  |||||||| |||||||||||||| |||||||||||||| || |||||||||
Sbjct: 1286 tatatcaggtcactcatgcgccatatctgcaatgttccacctccaccagtactctcacca 1227

                                                                        
Query: 424  tcatcagatacactcacaatggtccaagggtctgatgagttccagtggaaatctacaatc 483
            |||||||| ||||||||||| |||||||| || || || ||||||||||| |||||||||
Sbjct: 1226 tcatcagacacactcacaatagtccaaggatccgaagaattccagtggaagtctacaatc 1167

                                                                        
Query: 484  ttatccctatgacctgcatgttgaaagaaaagcccaccaggcgaattgggatttttcttc 543
            |||||||||||||| ||||||||||||||||||||| |||| |  |||||||||||||| 
Sbjct: 1166 ttatccctatgaccagcatgttgaaagaaaagcccagcaggtgcgttgggatttttctta 1107

                                                                        
Query: 544  tttccaaccttctcatggtcccacacatttaagaaaccatcttctgcagagcttccgaaa 603
            ||||||||||||||||| ||||||||||||||||| || ||||| ||||||||||| || 
Sbjct: 1106 tttccaaccttctcatgatcccacacatttaagaagccgtcttccgcagagcttccaaat 1047

                                                                        
Query: 604  acagatgctttgtcaggagaccactgaacacaaaggacggcagctttatggccctcaaat 663
            |||||||| |||||||| |||||   ||||||||| || ||||||||||| |||||||||
Sbjct: 1046 acagatgccttgtcaggtgacca---aacacaaagaacagcagctttatgaccctcaaat 990

                   
Query: 664  ttgtgaa 670
            |||||||
Sbjct: 989  ttgtgaa 983

---

>gb|AY109354.1| Zea mays CL199_1 mRNA sequence
          Length = 2472

 Score =  258 bits (130), Expect = 2e-65
 Identities = 202/226 (89%)
 Strand = Plus / Minus

                                                                        
Query: 294  cctcggagtgcagctggccaagtgagacttgaaggtctccagctctgaaagaacctcgtc 353
            |||||||| ||| ||||||| ||||| ||||||  |||||||||||| |||||| || ||
Sbjct: 2133 cctcggagcgcaactggccaggtgagccttgaaattctccagctctgtaagaacttcatc 2074

                                                                        
Query: 354  ctctgggcggtagatcaaatcactcatacgccatatctgcaaagttccacctccaccggt 413
            ||||||||||||||||||||||||||| |||||||||||||  |||||||||||||| ||
Sbjct: 2073 ctctgggcggtagatcaaatcactcattcgccatatctgcagtgttccacctccaccagt 2014

                                                                        
Query: 414  gctctcaccatcatcagatacactcacaatggtccaagggtctgatgagttccagtggaa 473
            ||||||||||||||| || ||||| ||||| |||||||| ||||| || |||||||||||
Sbjct: 2013 gctctcaccatcatctgagacactgacaattgtccaaggatctgacgaattccagtggaa 1954

                                                          
Query: 474  atctacaatcttatccctatgacctgcatgttgaaagaaaagccca 519
             ||||| ||||||||||||||||| ||||| |||||||||||||||
Sbjct: 1953 gtctacgatcttatccctatgaccagcatgctgaaagaaaagccca 1908



 Score =  165 bits (83), Expect = 2e-37
 Identities = 107/115 (93%)
 Strand = Plus / Minus

                                                                        
Query: 559  tggtcccacacatttaagaaaccatcttctgcagagcttccgaaaacagatgctttgtca 618
            |||||||| |||||||||||||||||||||||||| ||||| || ||||||||| |||||
Sbjct: 1868 tggtcccaaacatttaagaaaccatcttctgcagaacttccaaagacagatgctctgtca 1809

                                                                   
Query: 619  ggagaccactgaacacaaaggacggcagctttatggccctcaaatttgtgaattg 673
            || ||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 1808 ggtgaccactgaacacaaagaacagcagctttatggccctcaaatttgtgaattg 1754

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  123 bits (62), Expect = 8e-25
 Identities = 92/102 (90%)
 Strand = Plus / Minus

                                                                            
Query: 390      ctgcaaagttccacctccaccggtgctctcaccatcatcagatacactcacaatggtcca 449
                |||||| |||||||||||||| || ||||||||||||||||| ||||||||||| |||||
Sbjct: 29499658 ctgcaatgttccacctccaccagtactctcaccatcatcagacacactcacaatagtcca 29499599

                                                          
Query: 450      agggtctgatgagttccagtggaaatctacaatcttatccct 491
                ||| || || || ||||||||||| |||||||||||||||||
Sbjct: 29499598 aggatccgaagaattccagtggaagtctacaatcttatccct 29499557



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 74/82 (90%)
 Strand = Plus / Minus

                                                                            
Query: 550      accttctcatggtcccacacatttaagaaaccatcttctgcagagcttccgaaaacagat 609
                ||||||||||| ||||||||||||||||| || ||||| ||||||||||| || ||||||
Sbjct: 29498668 accttctcatgatcccacacatttaagaagccgtcttccgcagagcttccaaatacagat 29498609

                                      
Query: 610      gctttgtcaggagaccactgaa 631
                || |||||||| ||||||||||
Sbjct: 29498608 gccttgtcaggtgaccactgaa 29498587



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                            
Query: 304      cagctggccaagtgagacttgaaggtctccagctctgaaagaacctcgtcctctgggcgg 363
                |||||||||||||||| ||||||| |||||||||||| |||||| || || ||||| |||
Sbjct: 29499881 cagctggccaagtgagtcttgaagttctccagctctgcaagaacttcatcttctggacgg 29499822

                                            
Query: 364      tagatcaaatcactcatacgccatatct 391
                || ||||  |||||||| ||||||||||
Sbjct: 29499821 tatatcaggtcactcatgcgccatatct 29499794



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                            
Query: 489      cctatgacctgcatgttgaaagaaaagcccaccaggcgaattgggatttttcttctttcc 548
                ||||||||| ||||||||||||||||||||| |||| |  |||||||||||||| |||||
Sbjct: 29498881 cctatgaccagcatgttgaaagaaaagcccagcaggtgcgttgggatttttcttatttcc 29498822

                     
Query: 549      aacct 553
                |||||
Sbjct: 29498821 aacct 29498817



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                            
Query: 627      ctgaacacaaaggacggcagctttatggccctcaaatttgtgaa 670
                |||||||||||| || ||||||||||| ||||||||||||||||
Sbjct: 29498486 ctgaacacaaagaacagcagctttatgaccctcaaatttgtgaa 29498443

---

>dbj|AP002901.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0456F08
          Length = 156850

 Score =  123 bits (62), Expect = 8e-25
 Identities = 92/102 (90%)
 Strand = Plus / Minus

                                                                         
Query: 390   ctgcaaagttccacctccaccggtgctctcaccatcatcagatacactcacaatggtcca 449
             |||||| |||||||||||||| || ||||||||||||||||| ||||||||||| |||||
Sbjct: 65932 ctgcaatgttccacctccaccagtactctcaccatcatcagacacactcacaatagtcca 65873

                                                       
Query: 450   agggtctgatgagttccagtggaaatctacaatcttatccct 491
             ||| || || || ||||||||||| |||||||||||||||||
Sbjct: 65872 aggatccgaagaattccagtggaagtctacaatcttatccct 65831



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 74/82 (90%)
 Strand = Plus / Minus

                                                                         
Query: 550   accttctcatggtcccacacatttaagaaaccatcttctgcagagcttccgaaaacagat 609
             ||||||||||| ||||||||||||||||| || ||||| ||||||||||| || ||||||
Sbjct: 64942 accttctcatgatcccacacatttaagaagccgtcttccgcagagcttccaaatacagat 64883

                                   
Query: 610   gctttgtcaggagaccactgaa 631
             || |||||||| ||||||||||
Sbjct: 64882 gccttgtcaggtgaccactgaa 64861



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                         
Query: 304   cagctggccaagtgagacttgaaggtctccagctctgaaagaacctcgtcctctgggcgg 363
             |||||||||||||||| ||||||| |||||||||||| |||||| || || ||||| |||
Sbjct: 66155 cagctggccaagtgagtcttgaagttctccagctctgcaagaacttcatcttctggacgg 66096

                                         
Query: 364   tagatcaaatcactcatacgccatatct 391
             || ||||  |||||||| ||||||||||
Sbjct: 66095 tatatcaggtcactcatgcgccatatct 66068



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                         
Query: 489   cctatgacctgcatgttgaaagaaaagcccaccaggcgaattgggatttttcttctttcc 548
             ||||||||| ||||||||||||||||||||| |||| |  |||||||||||||| |||||
Sbjct: 65155 cctatgaccagcatgttgaaagaaaagcccagcaggtgcgttgggatttttcttatttcc 65096

                  
Query: 549   aacct 553
             |||||
Sbjct: 65095 aacct 65091



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                         
Query: 627   ctgaacacaaaggacggcagctttatggccctcaaatttgtgaa 670
             |||||||||||| || ||||||||||| ||||||||||||||||
Sbjct: 64760 ctgaacacaaagaacagcagctttatgaccctcaaatttgtgaa 64717

---

>ref|NM_127510.3| Arabidopsis thaliana FVE (FVE) AT2G19520 (FVE) mRNA, complete cds
          Length = 1871

 Score =  121 bits (61), Expect = 3e-24
 Identities = 130/153 (84%)
 Strand = Plus / Minus

                                                                        
Query: 367  atcaaatcactcatacgccatatctgcaaagttccacctccaccggtgctctcaccatca 426
            ||||| |||||||| |||||||||||||| |||||||||||||| ||  ||||||  |||
Sbjct: 1515 atcaagtcactcatccgccatatctgcaatgttccacctccaccagtagtctcacagtca 1456

                                                                        
Query: 427  tcagatacactcacaatggtccaagggtctgatgagttccagtggaaatctacaatctta 486
            ||||| ||||| ||||| |||||||||||||| |  |||||||||||||| ||||  || 
Sbjct: 1455 tcagaaacactgacaatagtccaagggtctgaagcattccagtggaaatcaacaactttg 1396

                                             
Query: 487  tccctatgacctgcatgttgaaagaaaagccca 519
            ||||| ||||| ||||| || ||||| ||||||
Sbjct: 1395 tccctgtgaccagcatgctggaagaagagccca 1363



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 82/94 (87%)
 Strand = Plus / Minus

                                                                        
Query: 574  aagaaaccatcttctgcagagcttccgaaaacagatgctttgtcaggagaccactgaaca 633
            |||| |||||||||||||||||| || || || ||||  || ||||||||||||||||||
Sbjct: 1302 aagagaccatcttctgcagagctcccaaagacggatgacttatcaggagaccactgaaca 1243

                                              
Query: 634  caaaggacggcagctttatggccctcaaatttgt 667
            ||||| || |||||||| || |||||||||||||
Sbjct: 1242 caaagaacagcagctttgtgtccctcaaatttgt 1209

---

>gb|AF498102.1| Arabidopsis thaliana MSI4 (FVE) mRNA, complete cds
          Length = 1871

 Score =  121 bits (61), Expect = 3e-24
 Identities = 130/153 (84%)
 Strand = Plus / Minus

                                                                        
Query: 367  atcaaatcactcatacgccatatctgcaaagttccacctccaccggtgctctcaccatca 426
            ||||| |||||||| |||||||||||||| |||||||||||||| ||  ||||||  |||
Sbjct: 1516 atcaagtcactcatccgccatatctgcaatgttccacctccaccagtagtctcacagtca 1457

                                                                        
Query: 427  tcagatacactcacaatggtccaagggtctgatgagttccagtggaaatctacaatctta 486
            ||||| ||||| ||||| |||||||||||||| |  |||||||||||||| ||||  || 
Sbjct: 1456 tcagaaacactgacaatagtccaagggtctgaagcattccagtggaaatcaacaactttg 1397

                                             
Query: 487  tccctatgacctgcatgttgaaagaaaagccca 519
            ||||| ||||| ||||| || ||||| ||||||
Sbjct: 1396 tccctgtgaccagcatgctggaagaagagccca 1364



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 82/94 (87%)
 Strand = Plus / Minus

                                                                        
Query: 574  aagaaaccatcttctgcagagcttccgaaaacagatgctttgtcaggagaccactgaaca 633
            |||| |||||||||||||||||| || || || ||||  || ||||||||||||||||||
Sbjct: 1303 aagagaccatcttctgcagagctcccaaagacggatgacttatcaggagaccactgaaca 1244

                                              
Query: 634  caaaggacggcagctttatggccctcaaatttgt 667
            ||||| || |||||||| || |||||||||||||
Sbjct: 1243 caaagaacagcagctttgtgtccctcaaatttgt 1210

---

>gb|AY081447.1| Arabidopsis thaliana putative WD-40 repeat protein, MSI4 (At2g19520)
            mRNA, complete cds
          Length = 1625

 Score =  121 bits (61), Expect = 3e-24
 Identities = 130/153 (84%)
 Strand = Plus / Minus

                                                                        
Query: 367  atcaaatcactcatacgccatatctgcaaagttccacctccaccggtgctctcaccatca 426
            ||||| |||||||| |||||||||||||| |||||||||||||| ||  ||||||  |||
Sbjct: 1445 atcaagtcactcatccgccatatctgcaatgttccacctccaccagtagtctcacagtca 1386

                                                                        
Query: 427  tcagatacactcacaatggtccaagggtctgatgagttccagtggaaatctacaatctta 486
            ||||| ||||| ||||| |||||||||||||| |  |||||||||||||| ||||  || 
Sbjct: 1385 tcagaaacactgacaatagtccaagggtctgaagcattccagtggaaatcaacaactttg 1326

                                             
Query: 487  tccctatgacctgcatgttgaaagaaaagccca 519
            ||||| ||||| ||||| || ||||| ||||||
Sbjct: 1325 tccctgtgaccagcatgctggaagaagagccca 1293



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 82/94 (87%)
 Strand = Plus / Minus

                                                                        
Query: 574  aagaaaccatcttctgcagagcttccgaaaacagatgctttgtcaggagaccactgaaca 633
            |||| |||||||||||||||||| || || || ||||  || ||||||||||||||||||
Sbjct: 1232 aagagaccatcttctgcagagctcccaaagacggatgacttatcaggagaccactgaaca 1173

                                              
Query: 634  caaaggacggcagctttatggccctcaaatttgt 667
            ||||| || |||||||| || |||||||||||||
Sbjct: 1172 caaagaacagcagctttgtgtccctcaaatttgt 1139

---

>gb|AY059799.1| Arabidopsis thaliana putative WD-40 repeat protein, MSI4 (At2g19520;
            F3P11.12) mRNA, complete cds
          Length = 1776

 Score =  121 bits (61), Expect = 3e-24
 Identities = 130/153 (84%)
 Strand = Plus / Minus

                                                                        
Query: 367  atcaaatcactcatacgccatatctgcaaagttccacctccaccggtgctctcaccatca 426
            ||||| |||||||| |||||||||||||| |||||||||||||| ||  ||||||  |||
Sbjct: 1469 atcaagtcactcatccgccatatctgcaatgttccacctccaccagtagtctcacagtca 1410

                                                                        
Query: 427  tcagatacactcacaatggtccaagggtctgatgagttccagtggaaatctacaatctta 486
            ||||| ||||| ||||| |||||||||||||| |  |||||||||||||| ||||  || 
Sbjct: 1409 tcagaaacactgacaatagtccaagggtctgaagcattccagtggaaatcaacaactttg 1350

                                             
Query: 487  tccctatgacctgcatgttgaaagaaaagccca 519
            ||||| ||||| ||||| || ||||| ||||||
Sbjct: 1349 tccctgtgaccagcatgctggaagaagagccca 1317



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 82/94 (87%)
 Strand = Plus / Minus

                                                                        
Query: 574  aagaaaccatcttctgcagagcttccgaaaacagatgctttgtcaggagaccactgaaca 633
            |||| |||||||||||||||||| || || || ||||  || ||||||||||||||||||
Sbjct: 1256 aagagaccatcttctgcagagctcccaaagacggatgacttatcaggagaccactgaaca 1197

                                              
Query: 634  caaaggacggcagctttatggccctcaaatttgt 667
            ||||| || |||||||| || |||||||||||||
Sbjct: 1196 caaagaacagcagctttgtgtccctcaaatttgt 1163

---

>gb|AY057655.1| Arabidopsis thaliana At2g19520/F3P11.12 mRNA, complete cds
          Length = 1810

 Score =  121 bits (61), Expect = 3e-24
 Identities = 130/153 (84%)
 Strand = Plus / Minus

                                                                        
Query: 367  atcaaatcactcatacgccatatctgcaaagttccacctccaccggtgctctcaccatca 426
            ||||| |||||||| |||||||||||||| |||||||||||||| ||  ||||||  |||
Sbjct: 1493 atcaagtcactcatccgccatatctgcaatgttccacctccaccagtagtctcacagtca 1434

                                                                        
Query: 427  tcagatacactcacaatggtccaagggtctgatgagttccagtggaaatctacaatctta 486
            ||||| ||||| ||||| |||||||||||||| |  |||||||||||||| ||||  || 
Sbjct: 1433 tcagaaacactgacaatagtccaagggtctgaagcattccagtggaaatcaacaactttg 1374

                                             
Query: 487  tccctatgacctgcatgttgaaagaaaagccca 519
            ||||| ||||| ||||| || ||||| ||||||
Sbjct: 1373 tccctgtgaccagcatgctggaagaagagccca 1341



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 82/94 (87%)
 Strand = Plus / Minus

                                                                        
Query: 574  aagaaaccatcttctgcagagcttccgaaaacagatgctttgtcaggagaccactgaaca 633
            |||| |||||||||||||||||| || || || ||||  || ||||||||||||||||||
Sbjct: 1280 aagagaccatcttctgcagagctcccaaagacggatgacttatcaggagaccactgaaca 1221

                                              
Query: 634  caaaggacggcagctttatggccctcaaatttgt 667
            ||||| || |||||||| || |||||||||||||
Sbjct: 1220 caaagaacagcagctttgtgtccctcaaatttgt 1187

---

>gb|AF028711.1|AF028711 Arabidopsis thaliana WD-40 repeat protein MSI4 (MSI4) mRNA, complete
            cds
          Length = 1815

 Score =  121 bits (61), Expect = 3e-24
 Identities = 130/153 (84%)
 Strand = Plus / Minus

                                                                        
Query: 367  atcaaatcactcatacgccatatctgcaaagttccacctccaccggtgctctcaccatca 426
            ||||| |||||||| |||||||||||||| |||||||||||||| ||  ||||||  |||
Sbjct: 1436 atcaagtcactcatccgccatatctgcaatgttccacctccaccagtagtctcacagtca 1377

                                                                        
Query: 427  tcagatacactcacaatggtccaagggtctgatgagttccagtggaaatctacaatctta 486
            ||||| ||||| ||||| |||||||||||||| |  |||||||||||||| ||||  || 
Sbjct: 1376 tcagaaacactgacaatagtccaagggtctgaagcattccagtggaaatcaacaactttg 1317

                                             
Query: 487  tccctatgacctgcatgttgaaagaaaagccca 519
            ||||| ||||| ||||| || ||||| ||||||
Sbjct: 1316 tccctgtgaccagcatgctggaagaagagccca 1284



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 82/94 (87%)
 Strand = Plus / Minus

                                                                        
Query: 574  aagaaaccatcttctgcagagcttccgaaaacagatgctttgtcaggagaccactgaaca 633
            |||| |||||||||||||||||| || || || ||||  || ||||||||||||||||||
Sbjct: 1223 aagagaccatcttctgcagagctcccaaagacggatgacttatcaggagaccactgaaca 1164

                                              
Query: 634  caaaggacggcagctttatggccctcaaatttgt 667
            ||||| || |||||||| || |||||||||||||
Sbjct: 1163 caaagaacagcagctttgtgtccctcaaatttgt 1130

---

>gb|AY830931.1| Pisum sativum FVE (FVE) mRNA, complete cds
          Length = 1750

 Score =  113 bits (57), Expect = 8e-22
 Identities = 108/125 (86%)
 Strand = Plus / Minus

                                                                        
Query: 547  ccaaccttctcatggtcccacacatttaagaaaccatcttctgcagagcttccgaaaaca 606
            |||||||||||||  ||||| |  ||||||| ||| |||||||| || ||||| || |||
Sbjct: 1273 ccaaccttctcataatcccaaatgtttaagagaccgtcttctgctgaacttccaaataca 1214

                                                                        
Query: 607  gatgctttgtcaggagaccactgaacacaaaggacggcagctttatggccctcaaatttg 666
            |||| |||||| |||||||||||||||||||| ||||||||||||||  |||||||||| 
Sbjct: 1213 gatgatttgtctggagaccactgaacacaaagaacggcagctttatgagcctcaaattta 1154

                 
Query: 667  tgaat 671
            |||||
Sbjct: 1153 tgaat 1149



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 113/135 (83%)
 Strand = Plus / Minus

                                                                        
Query: 315  gtgagacttgaaggtctccagctctgaaagaacctcgtcctctgggcggtagatcaaatc 374
            |||||| |||||  |||||| |||||  | |||||| |||||||| |  |||| ||||||
Sbjct: 1520 gtgagatttgaatttctccaactctgccaaaacctcatcctctggtctatagagcaaatc 1461

                                                                        
Query: 375  actcatacgccatatctgcaaagttccacctccaccggtgctctcaccatcatcagatac 434
            |||||| |||||||||||||| ||||| |||||||| || || |||| ||||||||| ||
Sbjct: 1460 actcatgcgccatatctgcaatgttcctcctccaccagtactttcacaatcatcagacac 1401

                           
Query: 435  actcacaatggtcca 449
            ||| ||||| |||||
Sbjct: 1400 acttacaattgtcca 1386

---

>ref|NM_119118.2| Arabidopsis thaliana MSI5 AT4G29730 (MSI5) mRNA, complete cds
          Length = 1750

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 83/94 (88%)
 Strand = Plus / Minus

                                                                        
Query: 574  aagaaaccatcttctgcagagcttccgaaaacagatgctttgtcaggagaccactgaaca 633
            |||| ||||||||||||||| || || |||||||||| ||| ||||||||||||||||||
Sbjct: 1188 aagagaccatcttctgcagaactcccaaaaacagatgatttatcaggagaccactgaaca 1129

                                              
Query: 634  caaaggacggcagctttatggccctcaaatttgt 667
            ||||| || |||||| | ||||| ||||||||||
Sbjct: 1128 caaagaacagcagctctgtggccttcaaatttgt 1095



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 130/158 (82%)
 Strand = Plus / Minus

                                                                        
Query: 367  atcaaatcactcatacgccatatctgcaaagttccacctccaccggtgctctcaccatca 426
            ||||| |||||||| |||||||||||||| || |||||||||||| | ||||||| || |
Sbjct: 1401 atcaagtcactcatccgccatatctgcaatgtaccacctccaccgatactctcacaatta 1342

                                                                        
Query: 427  tcagatacactcacaatggtccaagggtctgatgagttccagtggaaatctacaatctta 486
            ||||| ||||| ||||| ||||||||||   ||  | |||||||||| || || |  || 
Sbjct: 1341 tcagaaacactgacaatagtccaagggttcaataggctccagtggaagtcgaccactttg 1282

                                                  
Query: 487  tccctatgacctgcatgttgaaagaaaagcccaccagg 524
            ||||| ||||| ||||| || |||||||||||| ||||
Sbjct: 1281 tccctgtgaccagcatgctggaagaaaagcccatcagg 1244

---

>gb|BT010610.1| Arabidopsis thaliana At4g29730 gene, complete cds
          Length = 1464

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 83/94 (88%)
 Strand = Plus / Minus

                                                                        
Query: 574  aagaaaccatcttctgcagagcttccgaaaacagatgctttgtcaggagaccactgaaca 633
            |||| ||||||||||||||| || || |||||||||| ||| ||||||||||||||||||
Sbjct: 1172 aagagaccatcttctgcagaactcccaaaaacagatgatttatcaggagaccactgaaca 1113

                                              
Query: 634  caaaggacggcagctttatggccctcaaatttgt 667
            ||||| || |||||| | ||||| ||||||||||
Sbjct: 1112 caaagaacagcagctctgtggccttcaaatttgt 1079



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 130/158 (82%)
 Strand = Plus / Minus

                                                                        
Query: 367  atcaaatcactcatacgccatatctgcaaagttccacctccaccggtgctctcaccatca 426
            ||||| |||||||| |||||||||||||| || |||||||||||| | ||||||| || |
Sbjct: 1385 atcaagtcactcatccgccatatctgcaatgtaccacctccaccgatactctcacaatta 1326

                                                                        
Query: 427  tcagatacactcacaatggtccaagggtctgatgagttccagtggaaatctacaatctta 486
            ||||| ||||| ||||| ||||||||||   ||  | |||||||||| || || |  || 
Sbjct: 1325 tcagaaacactgacaatagtccaagggttcaataggctccagtggaagtcgaccactttg 1266

                                                  
Query: 487  tccctatgacctgcatgttgaaagaaaagcccaccagg 524
            ||||| ||||| ||||| || |||||||||||| ||||
Sbjct: 1265 tccctgtgaccagcatgctggaagaaaagcccatcagg 1228

---

>dbj|AK176425.1| Arabidopsis thaliana mRNA for WD-40 repeat-like protein, complete
            cds, clone: RAFL24-17-D02
          Length = 1719

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 83/94 (88%)
 Strand = Plus / Minus

                                                                        
Query: 574  aagaaaccatcttctgcagagcttccgaaaacagatgctttgtcaggagaccactgaaca 633
            |||| ||||||||||||||| || || |||||||||| ||| ||||||||||||||||||
Sbjct: 1188 aagagaccatcttctgcagaactcccaaaaacagatgatttatcaggagaccactgaaca 1129

                                              
Query: 634  caaaggacggcagctttatggccctcaaatttgt 667
            ||||| || |||||| | ||||| ||||||||||
Sbjct: 1128 caaagaacagcagctctgtggccttcaaatttgt 1095



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 130/158 (82%)
 Strand = Plus / Minus

                                                                        
Query: 367  atcaaatcactcatacgccatatctgcaaagttccacctccaccggtgctctcaccatca 426
            ||||| |||||||| |||||||||||||| || |||||||||||| | ||||||| || |
Sbjct: 1401 atcaagtcactcatccgccatatctgcaatgtaccacctccaccgatactctcacaatta 1342

                                                                        
Query: 427  tcagatacactcacaatggtccaagggtctgatgagttccagtggaaatctacaatctta 486
            ||||| ||||| ||||| ||||||||||   ||  | |||||||||| || || |  || 
Sbjct: 1341 tcagaaacactgacaatagtccaagggttcaataggctccagtggaagtcgaccactttg 1282

                                                  
Query: 487  tccctatgacctgcatgttgaaagaaaagcccaccagg 524
            ||||| ||||| ||||| || |||||||||||| ||||
Sbjct: 1281 tccctgtgaccagcatgctggaagaaaagcccatcagg 1244

---

>gb|AY849994.1| Arabidopsis thaliana ecotype Lz-0 FVE (FVE) gene, complete cds
          Length = 3250

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                        
Query: 390  ctgcaaagttccacctccaccggtgctctcaccatcatcagatacactcacaatggtcca 449
            |||||| |||||||||||||| ||  ||||||  |||||||| ||||| ||||| |||||
Sbjct: 3049 ctgcaatgttccacctccaccagtagtctcacagtcatcagaaacactgacaatagtcca 2990

                                                         
Query: 450  agggtctgatgagttccagtggaaatctacaatcttatccctatg 494
            ||||||||| |  |||||||||||||| ||||  || ||||||||
Sbjct: 2989 agggtctgaagcattccagtggaaatcaacaactttgtccctatg 2945



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                      
Query: 574  aagaaaccatcttctgcagagcttccgaaaacagatgctttgtcaggagaccactgaa 631
            |||| |||||||||||||||||| || || || ||||  || ||||||||||||||||
Sbjct: 2674 aagagaccatcttctgcagagctcccaaagacggatgacttatcaggagaccactgaa 2617



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 627  ctgaacacaaaggacggcagctttatggccctcaaatttgt 667
            |||||||||||| || |||||||| || |||||||||||||
Sbjct: 2536 ctgaacacaaagaacagcagctttgtgtccctcaaatttgt 2496

---

>gb|AF498101.1| Arabidopsis thaliana MSI4 (FVE) gene, complete cds
          Length = 5865

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                        
Query: 390  ctgcaaagttccacctccaccggtgctctcaccatcatcagatacactcacaatggtcca 449
            |||||| |||||||||||||| ||  ||||||  |||||||| ||||| ||||| |||||
Sbjct: 5389 ctgcaatgttccacctccaccagtagtctcacagtcatcagaaacactgacaatagtcca 5330

                                            
Query: 450  agggtctgatgagttccagtggaaatctacaa 481
            ||||||||| |  |||||||||||||| ||||
Sbjct: 5329 agggtctgaagcattccagtggaaatcaacaa 5298



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                      
Query: 574  aagaaaccatcttctgcagagcttccgaaaacagatgctttgtcaggagaccactgaa 631
            |||| |||||||||||||||||| || || || ||||  || ||||||||||||||||
Sbjct: 5011 aagagaccatcttctgcagagctcccaaagacggatgacttatcaggagaccactgaa 4954



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 627  ctgaacacaaaggacggcagctttatggccctcaaatttgt 667
            |||||||||||| || |||||||| || |||||||||||||
Sbjct: 4873 ctgaacacaaagaacagcagctttgtgtccctcaaatttgt 4833

---

>gb|AC005917.3| Arabidopsis thaliana chromosome 2 clone F3P11 map CIC06E08, complete
             sequence
          Length = 92822

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                         
Query: 390   ctgcaaagttccacctccaccggtgctctcaccatcatcagatacactcacaatggtcca 449
             |||||| |||||||||||||| ||  ||||||  |||||||| ||||| ||||| |||||
Sbjct: 53787 ctgcaatgttccacctccaccagtagtctcacagtcatcagaaacactgacaatagtcca 53728

                                             
Query: 450   agggtctgatgagttccagtggaaatctacaa 481
             ||||||||| |  |||||||||||||| ||||
Sbjct: 53727 agggtctgaagcattccagtggaaatcaacaa 53696



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                       
Query: 574   aagaaaccatcttctgcagagcttccgaaaacagatgctttgtcaggagaccactgaa 631
             |||| |||||||||||||||||| || || || ||||  || ||||||||||||||||
Sbjct: 53409 aagagaccatcttctgcagagctcccaaagacggatgacttatcaggagaccactgaa 53352



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 627   ctgaacacaaaggacggcagctttatggccctcaaatttgt 667
             |||||||||||| || |||||||| || |||||||||||||
Sbjct: 53271 ctgaacacaaagaacagcagctttgtgtccctcaaatttgt 53231

---

>gb|AC127170.11| Medicago truncatula clone mth2-35d10, complete sequence
          Length = 114143

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                        
Query: 316  tgagacttgaaggtctccagctctgaaagaacctcgtcctctgggcggtagatcaaatca 375
            ||||| |||||  ||||||||||||  | |||||| |||||||| | ||||| |||||||
Sbjct: 8651 tgagatttgaatttctccagctctgccaaaacctcatcctctggtctgtagagcaaatca 8592

                                 
Query: 376  ctcatacgccatatctgcaaa 396
            ||||| |||||||||||||||
Sbjct: 8591 ctcatgcgccatatctgcaaa 8571



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 579  accatcttctgcagagcttccgaaaacagatgctttgtcaggagaccactgaa 631
            |||||||||||| || ||||| || ||||||| |||||| |||||||||||||
Sbjct: 6632 accatcttctgctgaacttccaaatacagatgatttgtctggagaccactgaa 6580



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                      
Query: 627  ctgaacacaaaggacggcagctttatggccctcaaatttgtg 668
            ||||||||||||||| ||||| |||||  |||||||||||||
Sbjct: 6470 ctgaacacaaaggacagcagccttatgagcctcaaatttgtg 6429

---

>gb|AC160012.1| Medicago truncatula chromosome 2 BAC clone mth2-168l8, complete
             sequence
          Length = 145061

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                         
Query: 316   tgagacttgaaggtctccagctctgaaagaacctcgtcctctgggcggtagatcaaatca 375
             ||||| |||||  ||||||||||||  | |||||| |||||||| | ||||| |||||||
Sbjct: 61478 tgagatttgaatttctccagctctgccaaaacctcatcctctggtctgtagagcaaatca 61419

                                  
Query: 376   ctcatacgccatatctgcaaa 396
             ||||| |||||||||||||||
Sbjct: 61418 ctcatgcgccatatctgcaaa 61398



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                  
Query: 579   accatcttctgcagagcttccgaaaacagatgctttgtcaggagaccactgaa 631
             |||||||||||| || ||||| || ||||||| |||||| |||||||||||||
Sbjct: 59459 accatcttctgctgaacttccaaatacagatgatttgtctggagaccactgaa 59407



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                       
Query: 627   ctgaacacaaaggacggcagctttatggccctcaaatttgtg 668
             ||||||||||||||| ||||| |||||  |||||||||||||
Sbjct: 59297 ctgaacacaaaggacagcagccttatgagcctcaaatttgtg 59256

---

>emb|AL079344.1|ATT16L4 Arabidopsis thaliana DNA chromosome 4, BAC clone T16L4 (ESSA project)
          Length = 88011

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                       
Query: 574   aagaaaccatcttctgcagagcttccgaaaacagatgctttgtcaggagaccactgaa 631
             |||| ||||||||||||||| || || |||||||||| ||| ||||||||||||||||
Sbjct: 69651 aagagaccatcttctgcagaactcccaaaaacagatgatttatcaggagaccactgaa 69708



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                         
Query: 390   ctgcaaagttccacctccaccggtgctctcaccatcatcagatacactcacaatggtcca 449
             |||||| || |||||||||||| | ||||||| || |||||| ||||| ||||| |||||
Sbjct: 69288 ctgcaatgtaccacctccaccgatactctcacaattatcagaaacactgacaatagtcca 69347

                  
Query: 450   agggt 454
             |||||
Sbjct: 69348 agggt 69352



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 627   ctgaacacaaaggacggcagctttatggccctcaaatttgt 667
             |||||||||||| || |||||| | ||||| ||||||||||
Sbjct: 69811 ctgaacacaaagaacagcagctctgtggccttcaaatttgt 69851



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 367   atcaaatcactcatacgccatatctgca 394
             ||||| |||||||| |||||||||||||
Sbjct: 69170 atcaagtcactcatccgccatatctgca 69197

---

>emb|AL161575.2|ATCHRIV71 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 71
          Length = 200001

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                       
Query: 574   aagaaaccatcttctgcagagcttccgaaaacagatgctttgtcaggagaccactgaa 631
             |||| ||||||||||||||| || || |||||||||| ||| ||||||||||||||||
Sbjct: 94466 aagagaccatcttctgcagaactcccaaaaacagatgatttatcaggagaccactgaa 94523



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                         
Query: 390   ctgcaaagttccacctccaccggtgctctcaccatcatcagatacactcacaatggtcca 449
             |||||| || |||||||||||| | ||||||| || |||||| ||||| ||||| |||||
Sbjct: 94103 ctgcaatgtaccacctccaccgatactctcacaattatcagaaacactgacaatagtcca 94162

                  
Query: 450   agggt 454
             |||||
Sbjct: 94163 agggt 94167



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 627   ctgaacacaaaggacggcagctttatggccctcaaatttgt 667
             |||||||||||| || |||||| | ||||| ||||||||||
Sbjct: 94626 ctgaacacaaagaacagcagctctgtggccttcaaatttgt 94666



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 367   atcaaatcactcatacgccatatctgca 394
             ||||| |||||||| |||||||||||||
Sbjct: 93985 atcaagtcactcatccgccatatctgca 94012

---

>gb|BT012704.1| Lycopersicon esculentum clone 113579R, mRNA sequence
          Length = 1817

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 135/170 (79%)
 Strand = Plus / Minus

                                                                        
Query: 343  agaacctcgtcctctgggcggtagatcaaatcactcatacgccatatctgcaaagttcca 402
            |||||||| || ||||| | ||| || | |||| |||| ||||||||||| || || |||
Sbjct: 1388 agaacctcatcttctggtctgtaaatgagatcaatcattcgccatatctgtaatgtacca 1329

                                                                        
Query: 403  cctccaccggtgctctcaccatcatcagatacactcacaatggtccaagggtctgatgag 462
            |||||||| || || || || ||||| || ||||| ||||| ||||| || |||| |   
Sbjct: 1328 cctccaccagtactttctccgtcatctgacacactaacaatcgtccatggatctgctaca 1269

                                                              
Query: 463  ttccagtggaaatctacaatcttatccctatgacctgcatgttgaaagaa 512
            ||||||||||| || || | |||||||||||| || |||||  |||||||
Sbjct: 1268 ttccagtggaagtcgaccaccttatccctatgtccagcatgacgaaagaa 1219



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 69/84 (82%)
 Strand = Plus / Minus

                                                                        
Query: 579  accatcttctgcagagcttccgaaaacagatgctttgtcaggagaccactgaacacaaag 638
            ||||||||| || || ||||| || || |||| ||| || || |||||||| ||||||||
Sbjct: 1134 accatcttccgccgaacttccaaagactgatgatttatctggggaccactgtacacaaag 1075

                                    
Query: 639  gacggcagctttatggccctcaaa 662
             || |||||  |||||||||||||
Sbjct: 1074 cacagcagcagtatggccctcaaa 1051

---

>emb|AJ631222.1| Silene noctiflora partial mRNA for putative WD repeat protein
          Length = 1374

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 619  ggagaccactgaacacaaaggacggcagctttatggccctcaaatttgtgaa 670
            ||||||||||||||||||||||| | ||| | |||||||| |||||| ||||
Sbjct: 1022 ggagaccactgaacacaaaggacaggagcatcatggccctgaaatttatgaa 971

---

>gb|AC155896.2| Medicago truncatula chromosome 2 BAC clone mth2-85c24, complete
             sequence
          Length = 132817

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                         
Query: 400   ccacctccaccggtgctctcaccatcatcagatacactcacaatggtccaagggtctgat 459
             ||||||||||| |||||  ||| ||||||||||||||| ||||| ||||| || || |||
Sbjct: 50287 ccacctccaccagtgcttgcacaatcatcagatacactaacaattgtccatggatcagat 50228

                                             
Query: 460   gagttccagtggaaatctacaatcttatccct 491
             |  ||||| || || || |||| |||||||||
Sbjct: 50227 gcattccaatgaaagtcaacaaccttatccct 50196

---

>emb|AJ631221.1| Silene diclinis partial mRNA for putative WD repeat protein
          Length = 1374

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 382  cgccatatctgcaaagttccacctcca 408
            |||||||||||||| ||||||||||||
Sbjct: 1277 cgccatatctgcaatgttccacctcca 1251



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 622  gaccactgaacacaaaggacggcagctttatggccctcaaatttgtgaa 670
            |||||||||||||||||||| | ||| | ||| |||| |||||| ||||
Sbjct: 1019 gaccactgaacacaaaggacaggagcatcatgaccctgaaatttatgaa 971

---

>emb|AJ631220.1| Silene diclinis partial mRNA for putative WD repeat protein
          Length = 1374

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 382  cgccatatctgcaaagttccacctcca 408
            |||||||||||||| ||||||||||||
Sbjct: 1277 cgccatatctgcaatgttccacctcca 1251



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 622  gaccactgaacacaaaggacggcagctttatggccctcaaatttgtgaa 670
            |||||||||||||||||||| | ||| | ||| |||| |||||| ||||
Sbjct: 1019 gaccactgaacacaaaggacaggagcatcatgaccctgaaatttatgaa 971

---

>emb|AJ631219.1| Silene dioica partial mRNA for putative WD repeat protein
          Length = 1374

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 382  cgccatatctgcaaagttccacctcca 408
            |||||||||||||| ||||||||||||
Sbjct: 1277 cgccatatctgcaatgttccacctcca 1251



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 622  gaccactgaacacaaaggacggcagctttatggccctcaaatttgtgaa 670
            |||||||||||||||||||| | ||| | ||| |||| |||||| ||||
Sbjct: 1019 gaccactgaacacaaaggacaggagcatcatgaccctgaaatttatgaa 971

---

>emb|AJ631218.1| Silene dioica partial mRNA for putative WD repeat protein
          Length = 1374

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 382  cgccatatctgcaaagttccacctcca 408
            |||||||||||||| ||||||||||||
Sbjct: 1277 cgccatatctgcaatgttccacctcca 1251



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 622  gaccactgaacacaaaggacggcagctttatggccctcaaatttgtgaa 670
            |||||||||||||||||||| | ||| | ||| |||| |||||| ||||
Sbjct: 1019 gaccactgaacacaaaggacaggagcatcatgaccctgaaatttatgaa 971

---

>emb|Y18519.1|SLA18519 Silene latifolia mRNA for X1 protein
          Length = 1763

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 382  cgccatatctgcaaagttccacctcca 408
            |||||||||||||| ||||||||||||
Sbjct: 1305 cgccatatctgcaatgttccacctcca 1279



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 622  gaccactgaacacaaaggacggcagctttatggccctcaaatttgtgaa 670
            |||||||||||||||||||| | ||| | ||| |||| |||||| ||||
Sbjct: 1047 gaccactgaacacaaaggacaggagcatcatgaccctgaaatttatgaa 999

---

>emb|Y18517.1|SLA18517 Silene latifolia mRNA for Y1 protein
          Length = 1814

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 382  cgccatatctgcaaagttccacctcca 408
            |||||||||||||| ||||||||||||
Sbjct: 1375 cgccatatctgcaatgttccacctcca 1349



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 622  gaccactgaacacaaaggacggcagctttatggccctcaaatttgtgaa 670
            |||||||||||||||||||| | ||| | ||| |||| |||||| ||||
Sbjct: 1117 gaccactgaacacaaaggacaggagcatcatgaccctgaaatttatgaa 1069

---

>gb|AC162373.11| Mus musculus chromosome 18, clone RP23-410M11, complete sequence
          Length = 173382

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 21    acaatctcattacaaacaatg 41
             |||||||||||||||||||||
Sbjct: 67116 acaatctcattacaaacaatg 67096

---

>gb|AC129178.4| Mus musculus BAC clone RP23-217G18 from chromosome 16, complete
             sequence
          Length = 185769

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 316   tgagacttgaaggtctccagctctg 340
             |||| ||||||||||||||||||||
Sbjct: 74382 tgaggcttgaaggtctccagctctg 74358

---

>gb|AF326573.1| Dengue virus type 4 strain 814669, complete genome
          Length = 10649

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 530  tgggatttttcttctttccaa 550
            |||||||||||||||||||||
Sbjct: 8736 tgggatttttcttctttccaa 8716

---

>gb|AC124128.11| Mus musculus chromosome 6, clone RP23-158O11, complete sequence
          Length = 208907

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 68     tacaaaatgttcccaataggc 88
              |||||||||||||||||||||
Sbjct: 191929 tacaaaatgttcccaataggc 191949

---

>gb|AY243469.1| Chimeric Dengue virus vector p4(Delta30)-D2-CME, complete sequence
          Length = 15237

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 530  tgggatttttcttctttccaa 550
            |||||||||||||||||||||
Sbjct: 8734 tgggatttttcttctttccaa 8714

---

>gb|AY243468.1| Chimeric Dengue virus vector p4-D2-CME, complete sequence
          Length = 15268

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 530  tgggatttttcttctttccaa 550
            |||||||||||||||||||||
Sbjct: 8734 tgggatttttcttctttccaa 8714

---

>gb|AY243467.1| Chimeric Dengue virus vector p4(Delta30)-D2-ME, complete sequence
          Length = 15239

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 530  tgggatttttcttctttccaa 550
            |||||||||||||||||||||
Sbjct: 8736 tgggatttttcttctttccaa 8716

---

>gb|AY243466.1| Chimeric Dengue virus vector p4-D2-ME, complete sequence
          Length = 15270

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 530  tgggatttttcttctttccaa 550
            |||||||||||||||||||||
Sbjct: 8736 tgggatttttcttctttccaa 8716

---

>gb|AY376438.1| Dengue virus vector p4(Delta30), complete sequence
          Length = 15239

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 530  tgggatttttcttctttccaa 550
            |||||||||||||||||||||
Sbjct: 8736 tgggatttttcttctttccaa 8716

---

>gb|AC164631.5| Mus musculus 6 BAC RP23-359M3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 237469

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 68     tacaaaatgttcccaataggc 88
              |||||||||||||||||||||
Sbjct: 205022 tacaaaatgttcccaataggc 205002

---

>gb|AF375822.1|AF375822 Dengue virus type 4 recombinant clone 2A, complete genome
          Length = 10649

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 530  tgggatttttcttctttccaa 550
            |||||||||||||||||||||
Sbjct: 8736 tgggatttttcttctttccaa 8716

---

>gb|AF326827.1| Dengue virus type 4 recombinant clone rDEN4del30, complete sequence
          Length = 10618

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 530  tgggatttttcttctttccaa 550
            |||||||||||||||||||||
Sbjct: 8736 tgggatttttcttctttccaa 8716

---

>gb|AF326826.1| Dengue virus type 4 recombinant clone 2Adel30, complete sequence
          Length = 10618

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 530  tgggatttttcttctttccaa 550
            |||||||||||||||||||||
Sbjct: 8736 tgggatttttcttctttccaa 8716

---

>gb|AF326825.1| Dengue virus type 4 recombinant clone rDEN4, complete sequence
          Length = 10649

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 530  tgggatttttcttctttccaa 550
            |||||||||||||||||||||
Sbjct: 8736 tgggatttttcttctttccaa 8716

---

>gb|M14931.2|DENSTRA Dengue virus type 4 polyprotein precursor, gene, complete cds
          Length = 10648

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 530  tgggatttttcttctttccaa 550
            |||||||||||||||||||||
Sbjct: 8736 tgggatttttcttctttccaa 8716

---

>gb|AY656168.1| Chimeric dengue virus vector p4(delta30)-D3L-ME, complete sequence
          Length = 15256

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 530  tgggatttttcttctttccaa 550
            |||||||||||||||||||||
Sbjct: 8753 tgggatttttcttctttccaa 8733

---

>gb|AY656167.1| Chimeric dengue virus vector p4-D3L-ME, complete sequence
          Length = 15287

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 530  tgggatttttcttctttccaa 550
            |||||||||||||||||||||
Sbjct: 8753 tgggatttttcttctttccaa 8733

---

>gb|AY648301.1| Dengue virus type 4 vector p4, complete sequence
          Length = 15270

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 530  tgggatttttcttctttccaa 550
            |||||||||||||||||||||
Sbjct: 8736 tgggatttttcttctttccaa 8716

---

>gb|AE017131.1| Yersinia pestis biovar Medievalis str. 91001 section 5 of 16 of the
              complete genome
          Length = 291847

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     acaatctcattacaaacaat 40
              ||||||||||||||||||||
Sbjct: 288735 acaatctcattacaaacaat 288754



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     acaatctcattacaaacaat 40
              ||||||||||||||||||||
Sbjct: 288720 acaatctcattacaaacaat 288739

---

>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 21      acaatctcattacaaacaat 40
               ||||||||||||||||||||
Sbjct: 3223473 acaatctcattacaaacaat 3223492



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 21      acaatctcattacaaacaat 40
               ||||||||||||||||||||
Sbjct: 3223458 acaatctcattacaaacaat 3223477

---

>gb|AC122896.4| Mus musculus BAC clone RP23-69N8 from chromosome 10, complete sequence
          Length = 232473

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    acttgaaggtctccagctct 339
              ||||||||||||||||||||
Sbjct: 101511 acttgaaggtctccagctct 101530

---

>gb|AC131114.3| Mus musculus BAC clone RP24-212G16 from chromosome 19, complete
             sequence
          Length = 160122

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   agtctggctacagaaataaa 120
             ||||||||||||||||||||
Sbjct: 39772 agtctggctacagaaataaa 39753

---

>gb|AC113589.13| Mus musculus chromosome 9, clone RP23-257A19, complete sequence
          Length = 213826

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 493    tgacctgcatgttgaaagaaaagc 516
              |||| |||||||||||||||||||
Sbjct: 192376 tgacttgcatgttgaaagaaaagc 192399

---

>gb|AC133523.3| Mus musculus BAC clone RP23-34E20 from 19, complete sequence
          Length = 250866

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 385    catatctgcaaagttccacc 404
              ||||||||||||||||||||
Sbjct: 151978 catatctgcaaagttccacc 151997

---

>emb|AL451146.7| Human DNA sequence from clone RP11-510K18 on chromosome 10 Contains a
             serine/threonine protein kinase pseudogene, complete
             sequence
          Length = 200891

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 536   ttttcttctttccaaccttc 555
             ||||||||||||||||||||
Sbjct: 76886 ttttcttctttccaaccttc 76905

---

>ref|XM_966068.1| PREDICTED: Tribolium castaneum similar to RNA terminal phosphate
           cyclase domain 1 (LOC659795), mRNA
          Length = 1062

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 522 aggcgaattgggatttttct 541
           ||||||||||||||||||||
Sbjct: 107 aggcgaattgggatttttct 88

---

>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 21      acaatctcattacaaacaat 40
               ||||||||||||||||||||
Sbjct: 1550304 acaatctcattacaaacaat 1550285



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 21      acaatctcattacaaacaat 40
               ||||||||||||||||||||
Sbjct: 1550289 acaatctcattacaaacaat 1550270



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 21      acaatctcattacaaacaat 40
               ||||||||||||||||||||
Sbjct: 1550274 acaatctcattacaaacaat 1550255



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 21      acaatctcattacaaacaat 40
               ||||||||||||||||||||
Sbjct: 1550259 acaatctcattacaaacaat 1550240



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 21      acaatctcattacaaacaat 40
               ||||||||||||||||||||
Sbjct: 1550244 acaatctcattacaaacaat 1550225



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 21      acaatctcattacaaacaat 40
               ||||||||||||||||||||
Sbjct: 1550229 acaatctcattacaaacaat 1550210

---

>emb|AJ414147.1| Yersinia pestis strain CO92 complete genome; segment 7/20
          Length = 199050

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    acaatctcattacaaacaat 40
             ||||||||||||||||||||
Sbjct: 95249 acaatctcattacaaacaat 95230



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    acaatctcattacaaacaat 40
             ||||||||||||||||||||
Sbjct: 95234 acaatctcattacaaacaat 95215

---

>gb|AC150419.2| Branchiostoma floridae clone CH302-73J11, complete sequence
          Length = 185777

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 575   agaaaccatcttctgcagag 594
             ||||||||||||||||||||
Sbjct: 68769 agaaaccatcttctgcagag 68750



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 575   agaaaccatcttctgcagag 594
             ||||||||||||||||||||
Sbjct: 35271 agaaaccatcttctgcagag 35290

---

>gb|AY096002.1| Mus musculus NADH dehydrogenase:ubiquinone Fe-S protein 8 (Ndufs8)
            gene, complete cds
          Length = 9143

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 385  catatctgcaaagttccacc 404
            ||||||||||||||||||||
Sbjct: 1258 catatctgcaaagttccacc 1239

---

>gb|AC100826.2| Homo sapiens chromosome 15, clone RP11-279F6, complete sequence
          Length = 168512

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      aaactgagcaggtccaaaca 21
              ||||||||||||||||||||
Sbjct: 117187 aaactgagcaggtccaaaca 117206

---

>gb|AY084042.1| Silene flos-jovis XY1 protein gene, partial cds
          Length = 4175

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 627  ctgaacacaaaggacggcagctttatggccctcaaatttgtgaa 670
            ||||||||||||||| | ||| | |||||||| |||||| ||||
Sbjct: 3335 ctgaacacaaaggacaggagcatcatggccctgaaatttatgaa 3292

---

>gb|AY082378.1| Silene conica SlX1-like protein mRNA, partial cds
          Length = 963

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 622 gaccactgaacacaaaggacggcagctttatggccctcaaattt 665
           |||||||||||||| ||||| | ||| | |||||||| ||||||
Sbjct: 728 gaccactgaacacataggacaggagcatcatggccctgaaattt 685

---

>gb|AC011402.9| Homo sapiens chromosome 5 clone CTB-38B5, complete sequence
          Length = 70834

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 472   aaatctacaatcttatccct 491
             ||||||||||||||||||||
Sbjct: 24153 aaatctacaatcttatccct 24172

---

>gb|AC011370.4| Homo sapiens chromosome 5 clone CTB-107A22, complete sequence
          Length = 117145

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 472  aaatctacaatcttatccct 491
            ||||||||||||||||||||
Sbjct: 6334 aaatctacaatcttatccct 6353

---

>gb|AC160964.1| Mus musculus BAC clone RP24-316G24 from chromosome 9, complete sequence
          Length = 158842

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 493   tgacctgcatgttgaaagaaaagc 516
             |||| |||||||||||||||||||
Sbjct: 26120 tgacttgcatgttgaaagaaaagc 26143

---

>emb|AL929240.18| Mouse DNA sequence from clone RP23-245A10 on chromosome 2, complete
             sequence
          Length = 180092

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   gctacagaaataaagctccg 126
             ||||||||||||||||||||
Sbjct: 96704 gctacagaaataaagctccg 96723

---

>gb|AC167669.1| Mus musculus BAC clone RP24-138L8 from chromosome 13, complete sequence
          Length = 202905

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 526    gaattgggatttttcttctt 545
              ||||||||||||||||||||
Sbjct: 136881 gaattgggatttttcttctt 136900

---

>gb|AC079444.28| Mus musculus strain C57BL/6J chromosome 10 clone rp23-395k5, complete
             sequence
          Length = 171451

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   acttgaaggtctccagctct 339
             ||||||||||||||||||||
Sbjct: 10415 acttgaaggtctccagctct 10396

---

>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome
          Length = 1799146

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 17      aaacacaatctcattacaaa 36
               ||||||||||||||||||||
Sbjct: 1518000 aaacacaatctcattacaaa 1517981

---

>emb|AL807828.14| Mouse DNA sequence from clone RP23-184N11 on chromosome 4, complete
              sequence
          Length = 174593

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    acttgaaggtctccagctct 339
              ||||||||||||||||||||
Sbjct: 113873 acttgaaggtctccagctct 113892

---

>gb|AC131692.5| Mus musculus BAC clone RP23-391B20 from 19, complete sequence
          Length = 236246

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   agtctggctacagaaataaa 120
             ||||||||||||||||||||
Sbjct: 10523 agtctggctacagaaataaa 10504

---

>gb|DQ250682.1| Ipomoea nil FVE mRNA, partial cds
          Length = 528

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 382 cgccatatctgcaaagttccacctccaccggtgctctcaccatcatcagatacactcaca 441
           ||||||||||| |  || ||||||||||| |||   ||||  |||||||||||||| |||
Sbjct: 252 cgccatatctgtagtgtaccacctccacctgtggagtcacagtcatcagatacacttaca 193

                   
Query: 442 atggtcca 449
           || |||||
Sbjct: 192 attgtcca 185

---

>gb|AC009677.21| Homo sapiens chromosome 15, clone RP11-54P21, complete sequence
          Length = 194529

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     aaactgagcaggtccaaaca 21
             ||||||||||||||||||||
Sbjct: 27363 aaactgagcaggtccaaaca 27382

---

>gb|AC090503.12| Homo sapiens 12q BAC RP11-314D7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 221074

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 138    aagcatacaacaagttaaat 157
              ||||||||||||||||||||
Sbjct: 138548 aagcatacaacaagttaaat 138529


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,488,628
Number of Sequences: 3902068
Number of extensions: 6488628
Number of successful extensions: 134125
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 133835
Number of HSP's gapped (non-prelim): 288
length of query: 674
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 651
effective length of database: 17,143,297,704
effective search space: 11160286805304
effective search space used: 11160286805304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---