ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags27h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009082.1| Triticum aestivum clone wkm1c.pk0004.c1:fis, full... 551 e-154
2ref|XM_466191.1| Oryza sativa (japonica cultivar-group), mRNA 212 1e-51
3dbj|AK101886.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 1e-51
4gb|AY110592.1| Zea mays CL33432_1 mRNA sequence 168 1e-38
5gb|AY106702.1| Zea mays PCO105118 mRNA sequence 149 1e-32
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
7dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
8dbj|AK100761.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 9e-09
9dbj|AK100215.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 9e-09
10gb|AC137923.4| Oryza sativa (japonica cultivar-group) chromosome... 54 6e-04
11dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
12gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 54 6e-04
13emb|CT025840.2| Medicago truncatula chromosome 5 clone mth4-39c2... 42 2.1
14gb|AC152499.17| Medicago truncatula clone mth2-56f20, complete s... 42 2.1
15dbj|AK091872.1| Homo sapiens cDNA FLJ34553 fis, clone KIDNE2000624 42 2.1
16gb|AC004049.1|AC004049 Homo sapiens chromosome 4 clone B203C23 m... 42 2.1
17ref|XM_359608.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 8.3
18ref|XM_462282.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 8.3
19gb|AC151805.20| Medicago truncatula clone mth2-59n17, complete s... 40 8.3
20gb|AC170084.13| Medicago truncatula clone mth2-156k10, complete ... 40 8.3
21gb|AC091276.7| Mus musculus chromosome 15, clone RP23-167B4, com... 40 8.3
22gb|AC120558.12| Mus musculus chromosome 18, clone RP24-494K12, c... 40 8.3
23gb|AC132098.4| Mus musculus BAC clone RP24-401I1 from chromosome... 40 8.3
24gb|AC122887.2| Mus musculus BAC clone RP23-91L6 from 10, complet... 40 8.3
25gb|AC102633.7| Mus musculus chromosome 15, clone RP23-326O18, co... 40 8.3
26emb|Z18946.1|MLCGA Mycobacteriophage L5 complete genome 40 8.3
27emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS... 40 8.3
28emb|CR380950.1| Candida glabrata strain CBS138 chromosome D comp... 40 8.3
29gb|AC005013.3| Homo sapiens BAC clone GS1-165L15 from 7, complet... 40 8.3
30gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 8.3
31dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 40 8.3
32gb|AC016956.20| Homo sapiens 12 BAC RP11-56H16 (Roswell Park Can... 40 8.3
33emb|CR933843.16| Zebrafish DNA sequence from clone DKEY-105E17 i... 40 8.3
34gb|AC004391.1|AC004391 Homo sapiens Cosmid g5129s018, complete s... 40 8.3
35gb|AC153930.2| Mus musculus 10 BAC RP24-461H14 (Roswell Park Can... 40 8.3 
>gb|BT009082.1| Triticum aestivum clone wkm1c.pk0004.c1:fis, full insert mRNA
            sequence
          Length = 1505

 Score =  551 bits (278), Expect = e-154
 Identities = 401/435 (92%), Gaps = 14/435 (3%)
 Strand = Plus / Minus

                                                                        
Query: 176  gtggagtgctgccattgtttgatgaatgtggatgaatgataatctatcactc-gcctgct 234
            ||||||| |||||||||||||||||| |      |||||||||||||||| | |||||||
Sbjct: 1150 gtggagtactgccattgtttgatgaacg------aatgataatctatcaccccgcctgct 1097

                                                                        
Query: 235  t-ccatcaagggcgtgac---ttgtgggcacggggccggtttgtgaacacccgaccgttg 290
            | |||||||||| |||||   |||||||||||||||||||| ||||| ||||| || |||
Sbjct: 1096 ttccatcaagggtgtgacgacttgtgggcacggggccggttcgtgaatacccggccattg 1037

                                                                        
Query: 291  cttctcacaaagtgtgtgatgccaatgcaaagaccagcccagagaagtgacagcagtaaa 350
            |||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||
Sbjct: 1036 cttctcacaaagtgtgtgatcccgatgcaaagaccagcccagagaagtgacagcaataaa 977

                                                                        
Query: 351  tgacgagcatcgtgccgagcgtgcatcagtgacatcatcatgaatataaaagctccggaa 410
            ||||||||||| |||||||| ||  ||||||||||||||||||| |||||||||||||||
Sbjct: 976  tgacgagcatcatgccgagcatgtctcagtgacatcatcatgaacataaaagctccggaa 917

                                                                        
Query: 411  accaatgcaaaagcaaggcgggcggacgcatagctctctacaaatcctgcttttgctgga 470
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 916  accaatgcaaaagcaaggcgggcggacgcatagctctctacaaatcctgcttttgttgga 857

                                                                        
Query: 471  ggtgccatgtctcgactaacagatgtgatgtaaccgtccttgaagaagatccatggcatc 530
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 856  ggtgccatgtctcgactaacagatgtgatgtaa-cgtccttgaagaagatccatggcatc 798

                                                                        
Query: 531  ctgcttcgtcccgtctacgaagttgttcaagtagtatctagcaaggtgaantactggaga 590
            |||||||||||| ||| ||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 797  ctgcttcgtcccatctgcgaagttgttcaagtagtatctagcaa-gtgaa-tactggaga 740

                           
Query: 591  tcattgaaaattccc 605
            ||||| |||||||||
Sbjct: 739  tcatttaaaattccc 725



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 30   aactagcaacagctgtttgtttactggccaacaatcgatt 69
            |||||||||||||||||| |||||||| |||  |||||||
Sbjct: 1289 aactagcaacagctgtttatttactggtcaaagatcgatt 1250



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 39/43 (90%), Gaps = 1/43 (2%)
 Strand = Plus / Minus

                                                       
Query: 114  aacacaatcttcatgagaaaaaggatggacaccaattacatct 156
            ||||||||||||| ||| ||| |||||||||| ||||||||||
Sbjct: 1206 aacacaatcttcaggag-aaagggatggacacaaattacatct 1165
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>ref|XM_466191.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2423

 Score =  212 bits (107), Expect = 1e-51
 Identities = 255/303 (84%), Gaps = 1/303 (0%)
 Strand = Plus / Minus

                                                                        
Query: 273  gtgaacacccgaccgttgcttctcacaaagtgtgtgatgccaatgcaaagaccagcccag 332
            |||||||||||||| |||  ||| ||||| ||||||||||||||||||||||||||||| 
Sbjct: 1993 gtgaacacccgaccattggctctgacaaaatgtgtgatgccaatgcaaagaccagcccat 1934

                                                                        
Query: 333  agaagtgacagcagtaaatgacgagcatcgtgccgagcgtgcatcagtgacatcatcatg 392
            |||||||||| || |||||| ||| |||| | ||  || ||  | |||||||||||||||
Sbjct: 1933 agaagtgacaacactaaatggcgaacatcattcctggcttgtcttagtgacatcatcatg 1874

                                                                        
Query: 393  aatataaaagctccggaaaccaatgcaaaagcaaggcgggcggacgcatagctctctaca 452
            || |||| ||||||   ||||||||||||||||||||||  |||||||||  |||||| |
Sbjct: 1873 aacataagagctcccataaccaatgcaaaagcaaggcggaaggacgcataattctctaga 1814

                                                                        
Query: 453  aatcctgcttttgctggaggtgccatgtctcgactaacagatgtgatgtaaccgtccttg 512
            | |||||||||   ||||  ||||||||| || ||||||||| | ||||||  |||||||
Sbjct: 1813 agtcctgctttgcttggacctgccatgtcgcggctaacagatataatgtaa-tgtccttg 1755

                                                                        
Query: 513  aagaagatccatggcatcctgcttcgtcccgtctacgaagttgttcaagtagtatctagc 572
            ||| ||||||||||||||||| || || || ||| | ||||| |||||||||||||||||
Sbjct: 1754 aagtagatccatggcatcctgtttagtgccatctgcaaagttattcaagtagtatctagc 1695

               
Query: 573  aag 575
            |||
Sbjct: 1694 aag 1692
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>dbj|AK101886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070L24, full
            insert sequence
          Length = 2423

 Score =  212 bits (107), Expect = 1e-51
 Identities = 255/303 (84%), Gaps = 1/303 (0%)
 Strand = Plus / Minus

                                                                        
Query: 273  gtgaacacccgaccgttgcttctcacaaagtgtgtgatgccaatgcaaagaccagcccag 332
            |||||||||||||| |||  ||| ||||| ||||||||||||||||||||||||||||| 
Sbjct: 1993 gtgaacacccgaccattggctctgacaaaatgtgtgatgccaatgcaaagaccagcccat 1934

                                                                        
Query: 333  agaagtgacagcagtaaatgacgagcatcgtgccgagcgtgcatcagtgacatcatcatg 392
            |||||||||| || |||||| ||| |||| | ||  || ||  | |||||||||||||||
Sbjct: 1933 agaagtgacaacactaaatggcgaacatcattcctggcttgtcttagtgacatcatcatg 1874

                                                                        
Query: 393  aatataaaagctccggaaaccaatgcaaaagcaaggcgggcggacgcatagctctctaca 452
            || |||| ||||||   ||||||||||||||||||||||  |||||||||  |||||| |
Sbjct: 1873 aacataagagctcccataaccaatgcaaaagcaaggcggaaggacgcataattctctaga 1814

                                                                        
Query: 453  aatcctgcttttgctggaggtgccatgtctcgactaacagatgtgatgtaaccgtccttg 512
            | |||||||||   ||||  ||||||||| || ||||||||| | ||||||  |||||||
Sbjct: 1813 agtcctgctttgcttggacctgccatgtcgcggctaacagatataatgtaa-tgtccttg 1755

                                                                        
Query: 513  aagaagatccatggcatcctgcttcgtcccgtctacgaagttgttcaagtagtatctagc 572
            ||| ||||||||||||||||| || || || ||| | ||||| |||||||||||||||||
Sbjct: 1754 aagtagatccatggcatcctgtttagtgccatctgcaaagttattcaagtagtatctagc 1695

               
Query: 573  aag 575
            |||
Sbjct: 1694 aag 1692
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>gb|AY110592.1| Zea mays CL33432_1 mRNA sequence
          Length = 821

 Score =  168 bits (85), Expect = 1e-38
 Identities = 203/241 (84%), Gaps = 1/241 (0%)
 Strand = Plus / Plus

                                                                       
Query: 335 aagtgacagcagtaaatgacgagcatcgtgccgagcgtgcatcagtgacatcatcatgaa 394
           |||||||||||  ||||||||| |||| | ||| || ||  |||||||||||| ||||||
Sbjct: 399 aagtgacagcaacaaatgacgaacatcattccgggcctgtctcagtgacatcaacatgaa 458

                                                                       
Query: 395 tataaaagctccggaaaccaatgcaaaagcaaggcgggcggacgcatagctctctacaaa 454
            || | ||||||   ||||||||||||||||||||||  ||||||||| ||||  | || 
Sbjct: 459 cattagagctcccataaccaatgcaaaagcaaggcggaaggacgcataactctgcagaag 518

                                                                       
Query: 455 tcctgcttttgctggaggtgccatgtctcgactaacagatgtgatgtaaccgtccttgaa 514
           |||||||||   |||   |||||| |||| |||||||||||| ||||||  |||||||||
Sbjct: 519 tcctgctttgcttggcactgccatatctctactaacagatgtcatgtaat-gtccttgaa 577

                                                                       
Query: 515 gaagatccatggcatcctgcttcgtcccgtctacgaagttgttcaagtagtatctagcaa 574
           |||||||||||||||||||||| ||||| || |||||||| |||||||||||||||||||
Sbjct: 578 gaagatccatggcatcctgcttagtcccatcaacgaagttattcaagtagtatctagcaa 637

            
Query: 575 g 575
           |
Sbjct: 638 g 638
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>gb|AY106702.1| Zea mays PCO105118 mRNA sequence
          Length = 609

 Score =  149 bits (75), Expect = 1e-32
 Identities = 199/239 (83%), Gaps = 1/239 (0%)
 Strand = Plus / Minus

                                                                       
Query: 297 acaaagtgtgtgatgccaatgcaaagaccagcccagagaagtgacagcagtaaatgacga 356
           ||||| |||| ||||||||| |||||||| ||||| |||| ||||||||  ||||| |||
Sbjct: 243 acaaaatgtgagatgccaatacaaagaccggcccaaagaaatgacagcatcaaatggcga 184

                                                                       
Query: 357 gcatcgtgccgagcgtgcatcagtgacatcatcatgaatataaaagctccggaaaccaat 416
           ||||| | ||| || ||  | ||||||||||||||||| |  | ||||||   |||||||
Sbjct: 183 gcatcattccgggcttgtcttagtgacatcatcatgaacactagagctcccataaccaat 124

                                                                       
Query: 417 gcaaaagcaaggcgggcggacgcatagctctctacaaatcctgcttttgctggaggtgcc 476
           |||||||||||||||  ||||||||| ||||| | || ||||| |||   |||   ||||
Sbjct: 123 gcaaaagcaaggcggaaggacgcataactctccagaagtcctgatttgcttggcactgcc 64

                                                                      
Query: 477 atgtctcgactaacagatgtgatgtaaccgtccttgaagaagatccatggcatcctgct 535
           |||||||||||||||||||| |||| |  ||||||||||||||||||||||||||||||
Sbjct: 63  atgtctcgactaacagatgtcatgtta-tgtccttgaagaagatccatggcatcctgct 6
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 79/89 (88%)
 Strand = Plus / Plus

                                                                            
Query: 273      gtgaacacccgaccgttgcttctcacaaagtgtgtgatgccaatgcaaagaccagcccag 332
                |||||||||||||| |||  ||| ||||| ||||||||||||||||||||||||||||| 
Sbjct: 20941265 gtgaacacccgaccattggctctgacaaaatgtgtgatgccaatgcaaagaccagcccat 20941324

                                             
Query: 333      agaagtgacagcagtaaatgacgagcatc 361
                |||||||||| || |||||| ||| ||||
Sbjct: 20941325 agaagtgacaacactaaatggcgaacatc 20941353



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                      
Query: 378      agtgacatcatcatgaatataaaagctccggaaaccaatgcaaaagcaaggcgg 431
                ||||||||||||||||| |||| ||||||   ||||||||||||||||||||||
Sbjct: 20942362 agtgacatcatcatgaacataagagctcccataaccaatgcaaaagcaaggcgg 20942415



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 53/60 (88%), Gaps = 1/60 (1%)
 Strand = Plus / Plus

                                                                            
Query: 473      tgccatgtctcgactaacagatgtgatgtaaccgtccttgaagaagatccatggcatcct 532
                ||||||||| || ||||||||| | ||||||  |||||||||| ||||||||||||||||
Sbjct: 20942687 tgccatgtcgcggctaacagatataatgtaat-gtccttgaagtagatccatggcatcct 20942745



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 550      aagttgttcaagtagtatctagcaag 575
                ||||| ||||||||||||||||||||
Sbjct: 20943045 aagttattcaagtagtatctagcaag 20943070
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>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0470G10
          Length = 145419

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 79/89 (88%)
 Strand = Plus / Plus

                                                                         
Query: 273   gtgaacacccgaccgttgcttctcacaaagtgtgtgatgccaatgcaaagaccagcccag 332
             |||||||||||||| |||  ||| ||||| ||||||||||||||||||||||||||||| 
Sbjct: 64737 gtgaacacccgaccattggctctgacaaaatgtgtgatgccaatgcaaagaccagcccat 64796

                                          
Query: 333   agaagtgacagcagtaaatgacgagcatc 361
             |||||||||| || |||||| ||| ||||
Sbjct: 64797 agaagtgacaacactaaatggcgaacatc 64825



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                   
Query: 378   agtgacatcatcatgaatataaaagctccggaaaccaatgcaaaagcaaggcgg 431
             ||||||||||||||||| |||| ||||||   ||||||||||||||||||||||
Sbjct: 65834 agtgacatcatcatgaacataagagctcccataaccaatgcaaaagcaaggcgg 65887



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 53/60 (88%), Gaps = 1/60 (1%)
 Strand = Plus / Plus

                                                                         
Query: 473   tgccatgtctcgactaacagatgtgatgtaaccgtccttgaagaagatccatggcatcct 532
             ||||||||| || ||||||||| | ||||||  |||||||||| ||||||||||||||||
Sbjct: 66159 tgccatgtcgcggctaacagatataatgtaat-gtccttgaagtagatccatggcatcct 66217



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 550   aagttgttcaagtagtatctagcaag 575
             ||||| ||||||||||||||||||||
Sbjct: 66517 aagttattcaagtagtatctagcaag 66542
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>dbj|AK100761.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119H14, full
            insert sequence
          Length = 2184

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                        
Query: 506  gtccttgaagaagatccatggcatcctgcttcgtcccgtctacgaagttgttcaagtagt 565
            |||||||||||||||||||||||||||| || || || ||| | |||||||||| ||| |
Sbjct: 1631 gtccttgaagaagatccatggcatcctgtttagtaccatctgcaaagttgttcaggtaat 1572

                   
Query: 566  atctagc 572
            |||||||
Sbjct: 1571 atctagc 1565
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>dbj|AK100215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044O16, full
            insert sequence
          Length = 2174

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                        
Query: 506  gtccttgaagaagatccatggcatcctgcttcgtcccgtctacgaagttgttcaagtagt 565
            |||||||||||||||||||||||||||| || || || ||| | |||||||||| ||| |
Sbjct: 1689 gtccttgaagaagatccatggcatcctgtttagtaccatctgcaaagttgttcaggtaat 1630

                   
Query: 566  atctagc 572
            |||||||
Sbjct: 1629 atctagc 1623
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>gb|AC137923.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0066C04, complete sequence
          Length = 133944

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                        
Query: 506   gtccttgaagaagatccatggcatcct 532
             |||||||||||||||||||||||||||
Sbjct: 61053 gtccttgaagaagatccatggcatcct 61027
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                           
Query: 506      gtccttgaagaagatccatggcatcct 532
                |||||||||||||||||||||||||||
Sbjct: 11686673 gtccttgaagaagatccatggcatcct 11686699
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                           
Query: 506      gtccttgaagaagatccatggcatcct 532
                |||||||||||||||||||||||||||
Sbjct: 11765862 gtccttgaagaagatccatggcatcct 11765888
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>emb|CT025840.2| Medicago truncatula chromosome 5 clone mth4-39c23, COMPLETE SEQUENCE
          Length = 243542

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 406    cggaaaccaatgcaaaagcaa 426
              |||||||||||||||||||||
Sbjct: 147467 cggaaaccaatgcaaaagcaa 147447
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>gb|AC152499.17| Medicago truncatula clone mth2-56f20, complete sequence
          Length = 125561

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 406   cggaaaccaatgcaaaagcaa 426
             |||||||||||||||||||||
Sbjct: 71459 cggaaaccaatgcaaaagcaa 71479
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>dbj|AK091872.1| Homo sapiens cDNA FLJ34553 fis, clone KIDNE2000624
          Length = 2145

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 322 gaccagcccagagaagtgaca 342
           |||||||||||||||||||||
Sbjct: 758 gaccagcccagagaagtgaca 778
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>gb|AC004049.1|AC004049 Homo sapiens chromosome 4 clone B203C23 map 4q25, complete sequence
          Length = 173766

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 322    gaccagcccagagaagtgaca 342
              |||||||||||||||||||||
Sbjct: 140836 gaccagcccagagaagtgaca 140856
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>ref|XM_359608.1| Magnaporthe grisea 70-15 hypothetical protein (MG05169.4) partial
            mRNA
          Length = 2496

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 317  gcaaagaccagcccagagaa 336
            ||||||||||||||||||||
Sbjct: 2092 gcaaagaccagcccagagaa 2111
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>ref|XM_462282.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G18205g)
            partial mRNA
          Length = 2013

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 92   aaagaataagtatataatatacaa 115
            ||||||||||||||||||| ||||
Sbjct: 1134 aaagaataagtatataatagacaa 1157
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>gb|AC151805.20| Medicago truncatula clone mth2-59n17, complete sequence
          Length = 143937

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 92    aaagaataagtatataatatacaa 115
             ||||||||||||| ||||||||||
Sbjct: 91275 aaagaataagtatgtaatatacaa 91252
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>gb|AC170084.13| Medicago truncatula clone mth2-156k10, complete sequence
          Length = 143943

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 92    aaagaataagtatataatatacaa 115
             ||||||||||||| ||||||||||
Sbjct: 52662 aaagaataagtatgtaatatacaa 52685
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>gb|AC091276.7| Mus musculus chromosome 15, clone RP23-167B4, complete sequence
          Length = 255663

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      atgtcctgatacttctttgc 28
              ||||||||||||||||||||
Sbjct: 162117 atgtcctgatacttctttgc 162098
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>gb|AC120558.12| Mus musculus chromosome 18, clone RP24-494K12, complete sequence
          Length = 216435

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 96     aataagtatataatatacaacaca 119
              |||||||||||||| |||||||||
Sbjct: 185204 aataagtatataatttacaacaca 185227
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>gb|AC132098.4| Mus musculus BAC clone RP24-401I1 from chromosome 18, complete sequence
          Length = 154520

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 96    aataagtatataatatacaacaca 119
             |||||||||||||| |||||||||
Sbjct: 92183 aataagtatataatttacaacaca 92206
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>gb|AC122887.2| Mus musculus BAC clone RP23-91L6 from 10, complete sequence
          Length = 186103

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    aagaataagtatataatata 112
             ||||||||||||||||||||
Sbjct: 88630 aagaataagtatataatata 88611
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>gb|AC102633.7| Mus musculus chromosome 15, clone RP23-326O18, complete sequence
          Length = 225738

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     atgtcctgatacttctttgc 28
             ||||||||||||||||||||
Sbjct: 30986 atgtcctgatacttctttgc 30967
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>emb|Z18946.1|MLCGA Mycobacteriophage L5 complete genome
          Length = 52297

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 355   gagcatcgtgccgagcgtgc 374
             ||||||||||||||||||||
Sbjct: 16996 gagcatcgtgccgagcgtgc 16977
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>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces
               hansenii
          Length = 2051428

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 92      aaagaataagtatataatatacaa 115
               ||||||||||||||||||| ||||
Sbjct: 1387717 aaagaataagtatataatagacaa 1387694
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>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence
          Length = 651701

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    agtatataatatacaacaca 119
              ||||||||||||||||||||
Sbjct: 607603 agtatataatatacaacaca 607584
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>gb|AC005013.3| Homo sapiens BAC clone GS1-165L15 from 7, complete sequence
          Length = 195917

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    atcttcatgagaaaaaggat 139
              ||||||||||||||||||||
Sbjct: 143965 atcttcatgagaaaaaggat 143984
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 346     gtaaatgacgagcatcgtgc 365
               ||||||||||||||||||||
Sbjct: 1233613 gtaaatgacgagcatcgtgc 1233632
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>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 505    cgtccttgaagaagatccat 524
              ||||||||||||||||||||
Sbjct: 272235 cgtccttgaagaagatccat 272254
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>gb|AC016956.20| Homo sapiens 12 BAC RP11-56H16 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 86970

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 89   aacaaagaataagtatataatata 112
            |||||||||||||| |||||||||
Sbjct: 5313 aacaaagaataagtgtataatata 5290
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>emb|CR933843.16| Zebrafish DNA sequence from clone DKEY-105E17 in linkage group 18,
             complete sequence
          Length = 86233

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    aataagtatataatatacaa 115
             ||||||||||||||||||||
Sbjct: 40100 aataagtatataatatacaa 40119
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>gb|AC004391.1|AC004391 Homo sapiens Cosmid g5129s018, complete sequence
          Length = 38649

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   taagtaacaaagaataagta 103
            ||||||||||||||||||||
Sbjct: 9378 taagtaacaaagaataagta 9359
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>gb|AC153930.2| Mus musculus 10 BAC RP24-461H14 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 186915

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 93   aagaataagtatataatata 112
            ||||||||||||||||||||
Sbjct: 7109 aagaataagtatataatata 7128


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,564,819
Number of Sequences: 3902068
Number of extensions: 5564819
Number of successful extensions: 101142
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100905
Number of HSP's gapped (non-prelim): 227
length of query: 610
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 587
effective length of database: 17,143,297,704
effective search space: 10063115752248
effective search space used: 10063115752248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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