ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags27h04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AM039893.1| Hordeum vulgare sam1 gene for putative AdoMet synthase 1 Length = 1515 Score = 210 bits (106), Expect = 3e-51 Identities = 239/279 (85%), Gaps = 11/279 (3%) Strand = Plus / Minus Query: 167 acagagcaaact-gcacatcactcagcagtttcagcacactcaaaaagaaaatgaa-aaa 224 |||||||||||| |||||||||| ||||||||||| | || ||||||||||| | ||| Sbjct: 1503 acagagcaaacttgcacatcactaagcagtttcag-agacacaaaaagaaaaaggggaaa 1445 Query: 225 tatatgaaatgatacaccagtacgaaaacttagcactgatcactagacggcaagaccagt 284 ||||| |||||||||||||||| || ||||||||||||||||| |||||||||||||||| Sbjct: 1444 tatatcaaatgatacaccagtaagagaacttagcactgatcaccagacggcaagaccagt 1385 Query: 285 gcagccagacgcggtgatgtcgaatgcttcttcttacttnccaggagccaaagga----- 339 | ||| | ||| | ||||| |||||||||||||||||| | |||||| |||||| Sbjct: 1384 gtagcacgtcgcagcgatgttgaatgcttcttcttacttccgaggagcaaaaggatcccg 1325 Query: 340 --ttgttgaactagagtggcagcagaccaagaataaccc-cactgtgatgtcttcttctt 396 ||| ||||| ||| |||| ||||||||||| ||||| || ||||||||||| ||||| Sbjct: 1324 ccttgccgaacttgagaggcatcagaccaagaagaaccctcaatgtgatgtcttgttctt 1265 Query: 397 aggcagatgccttgtcgaacttgaggggcttcaccacct 435 | ||||||||||||||||||||||||||||||||||||| Sbjct: 1264 aagcagatgccttgtcgaacttgaggggcttcaccacct 1226
>emb|AM039895.1| Hordeum vulgare mRNA for putative AdoMet synthase 3 (sam3 gene) Length = 1447 Score = 182 bits (92), Expect = 6e-43 Identities = 189/221 (85%), Gaps = 8/221 (3%) Strand = Plus / Minus Query: 222 aaatatatgaaatgatacaccagtacgaaaacttagcactgatcactagacggcaagacc 281 |||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 1447 aaatatatcaaatgatacaccagtaagaaaacttagcactgatcaccagacggcaagacc 1388 Query: 282 agtgcagccagacgcggtgatgtcgaatgcttcttcttacttnccaggagccaaagga-- 339 |||| ||| | ||| | |||||||||||| | ||||||||| |||||||| |||| | Sbjct: 1387 agtgtagcacgtcgcagcgatgtcgaatgc-tgttcttacttcccaggagcaaaagaacc 1329 Query: 340 -----ttgttgaactagagtggcagcagaccaagaataaccccactgtgatgtcttcttc 394 ||| ||||| ||| |||| | ||||||||| | ||| | ||||||||||| ||| Sbjct: 1328 ccgccttgccgaacttgagaggcatctgaccaagaaaaccccgagtgtgatgtcttgttc 1269 Query: 395 ttaggcagatgccttgtcgaacttgaggggcttcaccacct 435 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1268 ttaggcagatgccttgtcgaacttgaggggcttcaccacct 1228
>emb|AM039894.1| Hordeum vulgare mRNA for putative AdoMet synthase 2 (sam2 gene) Length = 1297 Score = 135 bits (68), Expect = 1e-28 Identities = 75/76 (98%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 361 agaccaagaataaccc-cactgtgatgtcttcttcttaggcagatgccttgtcgaacttg 419 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1297 agaccaagaataaccctcactgtgatgtcttcttcttaggcagatgccttgtcgaacttg 1238 Query: 420 aggggcttcaccacct 435 |||||||||||||||| Sbjct: 1237 aggggcttcaccacct 1222
>dbj|D63835.1|BLYSAS Barley mRNA for S-adenosylmethionine synthetase, complete cds Length = 1353 Score = 125 bits (63), Expect = 1e-25 Identities = 124/144 (86%), Gaps = 8/144 (5%) Strand = Plus / Minus Query: 300 gatgtcgaatgcttcttcttacttnccaggagccaaaggat-------tgttgaactaga 352 ||||| |||||||||||||||||| | |||||| ||||||| || ||||| || Sbjct: 1342 gatgttgaatgcttcttcttacttccgaggagcaaaaggatcccgccttgccgaacttga 1283 Query: 353 gtggcagcagaccaagaataaccc-cactgtgatgtcttcttcttaggcagatgccttgt 411 | |||| ||||||||||| ||||| || |||||||||||||||||| ||||||||||||| Sbjct: 1282 gaggcatcagaccaagaagaaccctcaatgtgatgtcttcttcttaagcagatgccttgt 1223 Query: 412 cgaacttgaggggcttcaccacct 435 |||||||||||||||||||||||| Sbjct: 1222 cgaacttgaggggcttcaccacct 1199
>gb|BC042065.1| Homo sapiens, clone IMAGE:5729106, mRNA Length = 1630 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Minus Query: 208 aaaaagaaaatgaaaaatatatgaaat 234 ||||| ||||||||||||||||||||| Sbjct: 239 aaaaataaaatgaaaaatatatgaaat 213
>gb|AC005955.1|AC005955 Homo sapiens chromosome 19, cosmid R32065, complete sequence Length = 39801 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Minus Query: 208 aaaaagaaaatgaaaaatatatgaaat 234 ||||| ||||||||||||||||||||| Sbjct: 12605 aaaaataaaatgaaaaatatatgaaat 12579
>emb|AL354692.23| Human DNA sequence from clone RP11-361M4 on chromosome 9 Contains a novel pseudogene, complete sequence Length = 110443 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 207 caaaaagaaaatgaaaaatatatgaa 232 ||||||||||||||||||| |||||| Sbjct: 11209 caaaaagaaaatgaaaaatttatgaa 11184
>gb|AC129065.3| Didelphis virginiana clone LB3-118L8, complete sequence Length = 166731 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 207 caaaaagaaaatgaaaaatata 228 |||||||||||||||||||||| Sbjct: 32858 caaaaagaaaatgaaaaatata 32837
>gb|AC007632.4|AC007632 Homo sapiens clone R529C19B from chromosome 18, complete sequence Length = 205959 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 208 aaaaagaaaatgaaaaatatatgaaa 233 ||||||||||||||||||| |||||| Sbjct: 35647 aaaaagaaaatgaaaaataaatgaaa 35672
>emb|BX470255.18| Zebrafish DNA sequence from clone DKEY-76A14 in linkage group 1, complete sequence Length = 203708 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 208 aaaaagaaaatgaaaaatatat 229 |||||||||||||||||||||| Sbjct: 95034 aaaaagaaaatgaaaaatatat 95055
>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold Length = 1751794 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 207 caaaaagaaaatgaaaaatata 228 |||||||||||||||||||||| Sbjct: 1617921 caaaaagaaaatgaaaaatata 1617900
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 415 acttgaggggcttcaccacct 435 ||||||||||||||||||||| Sbjct: 124127 acttgaggggcttcaccacct 124107
>gb|AC102369.21| Mus musculus chromosome 12, clone RP23-246F14, complete sequence Length = 214580 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 aaaatgaaaaatatatgaaat 234 ||||||||||||||||||||| Sbjct: 71691 aaaatgaaaaatatatgaaat 71711
>gb|AC146436.4| Pan troglodytes BAC clone RP43-16B7 from 7, complete sequence Length = 154982 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 ggcagcagaccaagaataacc 375 ||||||||||||||||||||| Sbjct: 71561 ggcagcagaccaagaataacc 71581
>gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome Length = 1044459 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 ctggaagaaagagctttatga 115 ||||||||||||||||||||| Sbjct: 994933 ctggaagaaagagctttatga 994953
>gb|AC110883.12| Mus musculus chromosome 8, clone RP23-200N24, complete sequence Length = 293104 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 tttcagcacactcaaaaagaa 215 ||||||||||||||||||||| Sbjct: 114382 tttcagcacactcaaaaagaa 114362
>ref|XM_724233.1| Plasmodium yoelii yoelii str. 17XNL ATPase (PY01547) partial mRNA Length = 3105 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 aaaaagaaaatgaaaaatata 228 ||||||||||||||||||||| Sbjct: 2723 aaaaagaaaatgaaaaatata 2743
>gb|AC125323.4| Mus musculus BAC clone RP23-447G3 from chromosome 7, complete sequence Length = 174405 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 ctcaaaaagaaaatgaaaaat 225 ||||||||||||||||||||| Sbjct: 161594 ctcaaaaagaaaatgaaaaat 161574
>emb|BX936315.11| Zebrafish DNA sequence from clone CH211-37K10 in linkage group 17, complete sequence Length = 56864 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 agaaaatgaaaaatatatgaa 232 ||||||||||||||||||||| Sbjct: 9777 agaaaatgaaaaatatatgaa 9757
>emb|BX927353.7| Zebrafish DNA sequence from clone CH211-83F14 in linkage group 2, complete sequence Length = 94558 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 204 actcaaaaagaaaatgaaaaatatatgaa 232 |||||||||||||| |||||| ||||||| Sbjct: 68248 actcaaaaagaaaacgaaaaaaatatgaa 68220
>gb|AC121836.2| Mus musculus BAC clone RP24-73L11 from 8, complete sequence Length = 195192 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 tttcagcacactcaaaaagaa 215 ||||||||||||||||||||| Sbjct: 16470 tttcagcacactcaaaaagaa 16450
>gb|AC146141.2| Pan troglodytes BAC clone RP43-3A23 from 7, complete sequence Length = 182547 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 210 aaagaaaatgaaaaatatatgaaatgata 238 ||||||||||||||||| |||||| |||| Sbjct: 37444 aaagaaaatgaaaaataaatgaaaagata 37416
>ref|XM_721813.1| Plasmodium yoelii yoelii str. 17XNL NAD-dependent glycerol-3-phosphate dehydrogenase (PY00789) partial mRNA Length = 876 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 aaaagaaaatgaaaaatatatgaaa 233 ||||||||||| ||||||||||||| Sbjct: 285 aaaagaaaatgtaaaatatatgaaa 309
>ref|XM_737895.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000237.00.0) partial mRNA Length = 1311 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 aaaagaaaatgaaaaatatat 229 ||||||||||||||||||||| Sbjct: 387 aaaagaaaatgaaaaatatat 407
>ref|XM_738711.1| Plasmodium chabaudi chabaudi glycerol-3-phosphate dehydrogenase (PC000289.03.0) partial mRNA Length = 1146 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 aaaagaaaatgaaaaatatatgaaa 233 ||||||||||| ||||||||||||| Sbjct: 243 aaaagaaaatgtaaaatatatgaaa 267
>ref|XM_673175.1| Plasmodium berghei strain ANKA glycerol-3-phosphate dehydrogenase (PB000629.01.0) partial mRNA Length = 1056 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 209 aaaagaaaatgaaaaatatatgaaa 233 ||||||||||| ||||||||||||| Sbjct: 156 aaaagaaaatgtaaaatatatgaaa 180
>ref|XM_675074.1| Plasmodium berghei strain ANKA hypothetical protein (PB001049.02.0) partial mRNA Length = 2796 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 aaaaagaaaatgaaaaatata 228 ||||||||||||||||||||| Sbjct: 2414 aaaaagaaaatgaaaaatata 2434
>gb|AC078923.12| Homo sapiens 12 BAC RP11-699I16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152805 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 aaaaagaaaatgaaaaatata 228 ||||||||||||||||||||| Sbjct: 10192 aaaaagaaaatgaaaaatata 10212
>emb|Z26867.1|OSSAMS1 O.sativa (pRSAM-1) gene for S-adenosyl methionine synthetase Length = 2183 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 415 acttgaggggcttcaccacct 435 ||||||||||||||||||||| Sbjct: 1958 acttgaggggcttcaccacct 1938
>emb|AJ296743.1|OSA296743 Oryza sativa mRNA for S-adenosylmethionine synthetase (SAMS gene) Length = 1594 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 415 acttgaggggcttcaccacct 435 ||||||||||||||||||||| Sbjct: 1278 acttgaggggcttcaccacct 1258
>emb|CR936327.2| Medicago truncatula chromosome 5 clone mte1-68g1, COMPLETE SEQUENCE Length = 116729 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 tgaaaaatatatgaaatgata 238 ||||||||||||||||||||| Sbjct: 36165 tgaaaaatatatgaaatgata 36145
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 aaaagtgaaagtgacggagcg 162 ||||||||||||||||||||| Sbjct: 2202807 aaaagtgaaagtgacggagcg 2202827
>gb|AF420238.1|AF420238 Dendrobium crumenatum S-adenosyl-L-methionine synthetase (Sams) mRNA, complete cds Length = 1566 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 415 acttgaggggcttcaccacct 435 ||||||||||||||||||||| Sbjct: 1241 acttgaggggcttcaccacct 1221
>gb|AC158529.2| Mus musculus BAC clone RP23-263H3 from chromosome 13, complete sequence Length = 172769 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 200 gcacactcaaaaagaaaatgaaaaa 224 |||||||||||||||||| |||||| Sbjct: 158600 gcacactcaaaaagaaaaagaaaaa 158576
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 415 acttgaggggcttcaccacct 435 ||||||||||||||||||||| Sbjct: 2031250 acttgaggggcttcaccacct 2031230
>gb|AC131777.2| Mus musculus BAC clone RP24-318O6 from chromosome 9, complete sequence Length = 173761 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 272 cggcaagaccagtgcagccag 292 ||||||||||||||||||||| Sbjct: 167919 cggcaagaccagtgcagccag 167939
>gb|M73430.1|POPSAMPDPT Populus x generosa tissue-type leaf S-adenosyl methionine synthetase mRNA, complete cds Length = 1437 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 415 acttgaggggcttcaccacct 435 ||||||||||||||||||||| Sbjct: 1224 acttgaggggcttcaccacct 1204
>gb|AC007511.8|AC007511 Homo sapiens, clone RP11-84A1, complete sequence Length = 168822 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 aaaaagaaaatgaaaaatata 228 ||||||||||||||||||||| Sbjct: 131245 aaaaagaaaatgaaaaatata 131265
>gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome Length = 1042519 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 ctggaagaaagagctttatga 115 ||||||||||||||||||||| Sbjct: 992195 ctggaagaaagagctttatga 992215
>gb|AC009306.5| Homo sapiens BAC clone RP11-290K24 from 2, complete sequence Length = 176602 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 210 aaagaaaatgaaaaatatatgaaatgata 238 ||||||||||||||||| |||||| |||| Sbjct: 126600 aaagaaaatgaaaaataaatgaaaagata 126572
>gb|AY583461.1| Daucus carota S-adenosyl-L-methionine synthetase 1 (SAMS1) mRNA, complete cds Length = 1497 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 415 acttgaggggcttcaccacct 435 ||||||||||||||||||||| Sbjct: 1322 acttgaggggcttcaccacct 1302
>gb|AC002528.1|AC002528 Human BAC clone GS1-542D18 from 7q31-q32, complete sequence Length = 141120 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 ggcagcagaccaagaataacc 375 ||||||||||||||||||||| Sbjct: 118157 ggcagcagaccaagaataacc 118177
>dbj|AK104875.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D12, full insert sequence Length = 1487 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 415 acttgaggggcttcaccacct 435 ||||||||||||||||||||| Sbjct: 1186 acttgaggggcttcaccacct 1166
>dbj|AK103157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121A17, full insert sequence Length = 1586 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 415 acttgaggggcttcaccacct 435 ||||||||||||||||||||| Sbjct: 1289 acttgaggggcttcaccacct 1269
>dbj|AK072051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111H09, full insert sequence Length = 1555 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 415 acttgaggggcttcaccacct 435 ||||||||||||||||||||| Sbjct: 1289 acttgaggggcttcaccacct 1269
>emb|CT027724.7| Zebrafish DNA sequence from clone CH211-128D6 in linkage group 19, complete sequence Length = 146035 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 214 aaaatgaaaaatatatgaaatgata 238 ||||||||||| ||||||||||||| Sbjct: 104889 aaaatgaaaaaaatatgaaatgata 104865
>emb|BX005455.8| Zebrafish DNA sequence from clone CH211-77K19 in linkage group 19, complete sequence Length = 164741 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 214 aaaatgaaaaatatatgaaatgata 238 ||||||||||| ||||||||||||| Sbjct: 107617 aaaatgaaaaaaatatgaaatgata 107593
>emb|AL109628.5|CNS018OT Human chromosome 14 DNA sequence BAC R-545M17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 209817 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 209 aaaagaaaatgaaaaatatatgaaa 233 ||||||||| ||||||||||||||| Sbjct: 169373 aaaagaaaaggaaaaatatatgaaa 169349
>emb|CT030195.12| Mouse DNA sequence from clone RP23-191J8 on chromosome 13, complete sequence Length = 219800 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 200 gcacactcaaaaagaaaatgaaaaa 224 |||||||||||||||||| |||||| Sbjct: 110172 gcacactcaaaaagaaaaagaaaaa 110148
>gb|AC151477.1| Mus musculus BAC clone RP23-154G20 from 7, complete sequence Length = 212010 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 ctcaaaaagaaaatgaaaaat 225 ||||||||||||||||||||| Sbjct: 62298 ctcaaaaagaaaatgaaaaat 62318
>gb|AC133192.3| Mus musculus BAC clone RP23-396C4 from 9, complete sequence Length = 197959 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 cggcaagaccagtgcagccag 292 ||||||||||||||||||||| Sbjct: 157532 cggcaagaccagtgcagccag 157512
>gb|AC153385.3| Mus musculus 6 BAC RP23-64D14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226269 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 gatgtcttcttcttaggcagatgc 406 |||||||||| ||||||||||||| Sbjct: 31302 gatgtcttctccttaggcagatgc 31325
>gb|AC139128.6| Mus musculus chromosome 3, clone RP23-100B7, complete sequence Length = 239600 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 aaaaagaaaatgaaaaatat 227 |||||||||||||||||||| Sbjct: 218660 aaaaagaaaatgaaaaatat 218641
>ref|XM_631266.1| Dictyostelium discoideum hypothetical protein (DDB0188328), partial mRNA Length = 4011 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 aaaaagaaaatgaaaaatat 227 |||||||||||||||||||| Sbjct: 3650 aaaaagaaaatgaaaaatat 3669
>gb|BT016479.1| Zea mays clone Contig312 mRNA sequence Length = 1352 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 cttgaggggcttcaccacct 435 |||||||||||||||||||| Sbjct: 1001 cttgaggggcttcaccacct 982
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ctcaaaaagaaaatgaaaaa 224 |||||||||||||||||||| Sbjct: 3456512 ctcaaaaagaaaatgaaaaa 3456531
>gb|AC115722.12| Mus musculus chromosome 5, clone RP23-16N23, complete sequence Length = 194380 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tgggaaggacagggcaacag 70 |||||||||||||||||||| Sbjct: 128745 tgggaaggacagggcaacag 128764
>gb|AC125151.4| Mus musculus BAC clone RP24-355K8 from chromosome 14, complete sequence Length = 202916 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cagcacactcaaaaagaaaa 217 |||||||||||||||||||| Sbjct: 96498 cagcacactcaaaaagaaaa 96479
>gb|AC122352.4| Mus musculus BAC clone RP23-389C11 from chromosome 16, complete sequence Length = 196519 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 agaaagagctttatgagggg 119 |||||||||||||||||||| Sbjct: 9873 agaaagagctttatgagggg 9854
>ref|XM_381687.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01511.1) partial mRNA Length = 1386 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 ggagccaaaggattgttgaa 347 |||||||||||||||||||| Sbjct: 1007 ggagccaaaggattgttgaa 988
>emb|CR392003.9| Zebrafish DNA sequence from clone DKEY-242N9 in linkage group 3, complete sequence Length = 182043 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tcaaaaagaaaatgaaaaat 225 |||||||||||||||||||| Sbjct: 13673 tcaaaaagaaaatgaaaaat 13692
>gb|AC124689.5| Mus musculus BAC clone RP24-147N6 from chromosome 6, complete sequence Length = 187752 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 gatgtcttcttcttaggcagatgc 406 |||||||||| ||||||||||||| Sbjct: 116122 gatgtcttctccttaggcagatgc 116145
>gb|AY372452.1| Uncultured marine proteobacterium ANT8C10 fosmid clone Length = 37903 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 198 cagcacactcaaaaagaaaatgaaaaat 225 ||||| |||||||||||||| ||||||| Sbjct: 7340 cagcagactcaaaaagaaaaggaaaaat 7313
>ref|XM_725942.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03070) partial mRNA Length = 1176 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 aaagaaaatgaaaaatatat 229 |||||||||||||||||||| Sbjct: 1048 aaagaaaatgaaaaatatat 1067
>gb|AC002432.1| Homo sapiens BAC clone CTA-317G18 from 7, complete sequence Length = 143427 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 207 caaaaagaaaatgaaaaatatatg 230 ||||||||||||||| |||||||| Sbjct: 69046 caaaaagaaaatgaataatatatg 69069
>ref|XM_673228.1| Plasmodium berghei strain ANKA hypothetical protein (PB000048.00.0) partial mRNA Length = 3522 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 aaagaaaatgaaaaatatat 229 |||||||||||||||||||| Sbjct: 904 aaagaaaatgaaaaatatat 923
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ctcaaaaagaaaatgaaaaa 224 |||||||||||||||||||| Sbjct: 3460679 ctcaaaaagaaaatgaaaaa 3460698
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10, complete sequence Length = 170681 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 aaaatgaaaaatatatgaaa 233 |||||||||||||||||||| Sbjct: 51716 aaaatgaaaaatatatgaaa 51697
>gb|AC156629.26| Medicago truncatula clone mth2-143f17, complete sequence Length = 130456 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 aaaaagaaaatgaaaaatatatga 231 ||||| |||||||||||||||||| Sbjct: 63841 aaaaaaaaaatgaaaaatatatga 63864
>emb|CR450821.7| Zebrafish DNA sequence from clone CH211-156B7 in linkage group 3, complete sequence Length = 163751 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 tcaaaaagaaaatgaaaaatatat 229 ||||||||||||| |||||||||| Sbjct: 23747 tcaaaaagaaaataaaaaatatat 23770
>emb|BX323845.6| Human DNA sequence from clone RP11-272G22 on chromosome X Contains a pseudogene similar to part of 6-phosphofructo-2-kinase/fructose-2 6-biphosphatase 1 (PFKFB1), a pseudogene similar to part of ribosomal protein S13 (RPS13) and a mitochondrial ribosomal protein L32 (MRPL32) pseudogene, complete sequence Length = 86141 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ctcaaaaagaaaatgaaaaa 224 |||||||||||||||||||| Sbjct: 80211 ctcaaaaagaaaatgaaaaa 80230
>gb|AC026887.9| Homo sapiens chromosome 10 clone RP11-544P1, complete sequence Length = 187495 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 aaaatgaaaaatatatgaaa 233 |||||||||||||||||||| Sbjct: 106868 aaaatgaaaaatatatgaaa 106849
>emb|AL355862.16| Human DNA sequence from clone RP4-640E24 on chromosome 1q21.3-23.1 Contains a pseudogene similar to the likely ortholog of mouse gene rich cluster C10 (GRCC10), complete sequence Length = 102512 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 201 cacactcaaaaagaaaatgaaaaatata 228 |||||||||||| ||||||||| ||||| Sbjct: 41014 cacactcaaaaataaaatgaaagatata 41041
>gb|AC110014.4| Homo sapiens chromosome 18, clone CTC-782O7, complete sequence Length = 148075 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 caaaaagaaaatgaaaaata 226 |||||||||||||||||||| Sbjct: 145438 caaaaagaaaatgaaaaata 145419
>emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chromosome 5, segment 4/4 Length = 340552 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 aaaaagaaaatgaaaaatat 227 |||||||||||||||||||| Sbjct: 134347 aaaaagaaaatgaaaaatat 134366
>emb|BX927415.8| Zebrafish DNA sequence from clone CH211-1B13 in linkage group 1, complete sequence Length = 202881 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 cacactcaaaaagaaaatga 220 |||||||||||||||||||| Sbjct: 24436 cacactcaaaaagaaaatga 24455
>gb|AC150243.3| Rhinolophus ferrumequinum clone VMRC7-394F3, complete sequence Length = 110295 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ctcaaaaagaaaatgaaaaa 224 |||||||||||||||||||| Sbjct: 93903 ctcaaaaagaaaatgaaaaa 93922
>gb|AC018361.15| Homo sapiens 3 BAC RP11-41O13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 146511 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gaaaatgaaaaatatatgaa 232 |||||||||||||||||||| Sbjct: 40218 gaaaatgaaaaatatatgaa 40237
>gb|AC171265.5| Medicago truncatula clone mth2-2j17, complete sequence Length = 117361 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 aaaagaaaatgaaaaatatatgaa 232 |||| ||||||||||||||||||| Sbjct: 31903 aaaataaaatgaaaaatatatgaa 31926
>dbj|AK125253.1| Homo sapiens cDNA FLJ43263 fis, clone HLUNG2012049 Length = 2731 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 aaaaatatatgaaatgatac 239 |||||||||||||||||||| Sbjct: 1664 aaaaatatatgaaatgatac 1645
>gb|AC146722.16| Medicago truncatula clone mth2-23c16, complete sequence Length = 121968 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 aaaaagaaaatgaaaaatat 227 |||||||||||||||||||| Sbjct: 101343 aaaaagaaaatgaaaaatat 101362
>gb|AC104248.3| Homo sapiens chromosome 8, clone RP11-1084E5, complete sequence Length = 200318 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 aaaagaaaatgaaaaatatatgaa 232 |||||||||| ||||||||||||| Sbjct: 184205 aaaagaaaattaaaaatatatgaa 184228
>tpg|BK002356.1| TPA: TPA_inf: Drosophila melanogaster HDC12183 (HDC12183) gene, complete cds Length = 1764 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tcaaaaagaaaatgaaaaat 225 |||||||||||||||||||| Sbjct: 614 tcaaaaagaaaatgaaaaat 595
>gb|AC087045.7| Homo sapiens chromosome 8, clone CTD-2342N23, complete sequence Length = 121280 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ctcaaaaagaaaatgaaaaa 224 |||||||||||||||||||| Sbjct: 114045 ctcaaaaagaaaatgaaaaa 114026
>gb|AC104945.4| Homo sapiens chromosome 8, clone RP11-384L9, complete sequence Length = 181328 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 209 aaaagaaaatgaaaaatatatgaa 232 |||||||||| ||||||||||||| Sbjct: 171406 aaaagaaaattaaaaatatatgaa 171383
>gb|AC087435.5| Homo sapiens chromosome 8, clone RP11-79O20, complete sequence Length = 158447 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 209 aaaagaaaatgaaaaatatatgaa 232 |||||||||| ||||||||||||| Sbjct: 73612 aaaagaaaattaaaaatatatgaa 73589
>gb|AC104166.2| Homo sapiens chromosome 3 clone RP11-199N21, complete sequence Length = 171705 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 aagaaaatgaaaaatatatg 230 |||||||||||||||||||| Sbjct: 18657 aagaaaatgaaaaatatatg 18676
>gb|AC008393.7| Homo sapiens chromosome 5 clone CTC-241N9, complete sequence Length = 166847 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 aaaaatatatgaaatgatac 239 |||||||||||||||||||| Sbjct: 107765 aaaaatatatgaaatgatac 107784
>gb|AC104664.2| Homo sapiens BAC clone RP11-724H6 from 4, complete sequence Length = 158145 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 aaaaagaaaatgaaaaatat 227 |||||||||||||||||||| Sbjct: 51769 aaaaagaaaatgaaaaatat 51750
>gb|AC096922.2| Homo sapiens chromosome 3 clone RP11-436J20, complete sequence Length = 218652 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 aagaaaatgaaaaatatatg 230 |||||||||||||||||||| Sbjct: 14638 aagaaaatgaaaaatatatg 14619
>gb|AC090792.6| Homo sapiens chromosome 15, clone RP11-937I24, complete sequence Length = 52592 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 cagcacactcaaaaagaaaatgaa 221 ||||||||| |||||||||||||| Sbjct: 42291 cagcacactgaaaaagaaaatgaa 42314
>gb|AC024301.10| Homo sapiens, clone RP11-686O16, complete sequence Length = 195269 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 caaaaagaaaatgaaaaata 226 |||||||||||||||||||| Sbjct: 2992 caaaaagaaaatgaaaaata 2973
>gb|AC095015.1| Drosophila melanogaster, chromosome 3R, region 84A-84B, BAC clone BACR32J03, complete sequence Length = 190642 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tcaaaaagaaaatgaaaaat 225 |||||||||||||||||||| Sbjct: 1351 tcaaaaagaaaatgaaaaat 1332
>gb|AC095014.1| Drosophila melanogaster, chromosome 3R, region 83F-84A, BAC clone BACR19D23, complete sequence Length = 170801 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tcaaaaagaaaatgaaaaat 225 |||||||||||||||||||| Sbjct: 168334 tcaaaaagaaaatgaaaaat 168315
>gb|AC093488.1| Homo sapiens chromosome 3 clone RP11-10O8 map 3p, complete sequence Length = 159603 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 aaaaagaaaatgaaaaatatatga 231 |||||||||| ||||||||||||| Sbjct: 35289 aaaaagaaaaagaaaaatatatga 35312
>gb|AF295068.2|AF314199S7 Homo sapiens neuroplastoma apoptosis-related RNA-binding protein (CUGBP2) gene, exons 10, 11a, 11b, 12, 13a, 13b, 14, and complete cds, alternatively spliced Length = 78359 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 aaaatgaaaaatatatgaaa 233 |||||||||||||||||||| Sbjct: 9684 aaaatgaaaaatatatgaaa 9703
>gb|AC154567.3| Mus musculus BAC clone RP23-245F1 from chromosome 14, complete sequence Length = 155103 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 aaatgaaaaatatatgaaat 234 |||||||||||||||||||| Sbjct: 15869 aaatgaaaaatatatgaaat 15888
>gb|AY039010.1| Elaeis oleifera S-adenosyl methionine synthetase (SAMS1) mRNA, partial cds Length = 545 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 cttgaggggcttcaccacct 435 |||||||||||||||||||| Sbjct: 224 cttgaggggcttcaccacct 205
>gb|AE001572.2| Drosophila melanogaster Antennapedia complex (ANT-C),complete sequence Length = 429825 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tcaaaaagaaaatgaaaaat 225 |||||||||||||||||||| Sbjct: 222440 tcaaaaagaaaatgaaaaat 222459
>gb|AC073897.6|AC073897 Homo sapiens chromosome 15 clone RP11-718O11 map 15q21.1, complete sequence Length = 180538 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 cagcacactcaaaaagaaaatgaa 221 ||||||||| |||||||||||||| Sbjct: 83030 cagcacactgaaaaagaaaatgaa 83053
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 aaaatgaaaaatatatgaaa 233 |||||||||||||||||||| Sbjct: 21528197 aaaatgaaaaatatatgaaa 21528178
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Minus Query: 209 aaaagaaaatgaaaaa--tatatgaaatgat 237 |||||||||||||||| ||||||||||||| Sbjct: 21503355 aaaagaaaatgaaaaaaatatatgaaatgat 21503325
>gb|AC015599.5|AC015599 Homo sapiens chromosome , clone RP11-45B19, complete sequence Length = 162607 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ctcaaaaagaaaatgaaaaa 224 |||||||||||||||||||| Sbjct: 159713 ctcaaaaagaaaatgaaaaa 159732
>emb|BX537121.4| Zebrafish DNA sequence from clone CH211-196P24 in linkage group 3, complete sequence Length = 184845 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 tcaaaaagaaaatgaaaaat 225 |||||||||||||||||||| Sbjct: 86400 tcaaaaagaaaatgaaaaat 86419
>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold Length = 1756392 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 ctcaaaaagaaaatgaaaaa 224 |||||||||||||||||||| Sbjct: 1186526 ctcaaaaagaaaatgaaaaa 1186545
>gb|AC016716.6| Homo sapiens BAC clone RP11-312I3 from 2, complete sequence Length = 214269 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 aagaaagagctttatgaggg 118 |||||||||||||||||||| Sbjct: 79061 aagaaagagctttatgaggg 79042
>gb|AC073987.4| Homo sapiens BAC clone RP11-441C24 from 2, complete sequence Length = 152351 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 aaatgaaaaatatatgaaat 234 |||||||||||||||||||| Sbjct: 44115 aaatgaaaaatatatgaaat 44134
>gb|AC008431.5|AC008431 Homo sapiens chromosome 5 clone CTC-311C22, complete sequence Length = 118947 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 215 aaatgaaaaatatatgaaatgata 238 |||||| ||||||||||||||||| Sbjct: 74896 aaatgataaatatatgaaatgata 74873
>gb|AC091493.2| Homo sapiens chromosome 3 clone RP11-357E4 map 3p, complete sequence Length = 186953 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 aaaaagaaaatgaaaaatatatga 231 |||||||||| ||||||||||||| Sbjct: 106045 aaaaagaaaaagaaaaatatatga 106068
>gb|AC018752.4|AC018752 Homo sapiens chromosome 5 clone CTC-339F2, complete sequence Length = 206691 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 215 aaatgaaaaatatatgaaatgata 238 |||||| ||||||||||||||||| Sbjct: 74894 aaatgataaatatatgaaatgata 74871
>gb|AC021198.2|F14D7 Sequence of BAC F14D7 from Arabidopsis thaliana chromosome 1, complete sequence Length = 81513 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 aaaatgaaaaatatatgaaa 233 |||||||||||||||||||| Sbjct: 21549 aaaatgaaaaatatatgaaa 21568
>dbj|AP007256.1| Danio rerio DNA, clone:DKEY-188F22, complete sequence Length = 155274 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 aaaacagaatatgaaaagtgaaag 152 |||||||||||| ||||||||||| Sbjct: 102952 aaaacagaatattaaaagtgaaag 102929
>emb|BX072576.4| Zebrafish DNA sequence from clone DKEY-242E21 in linkage group 16, complete sequence Length = 161771 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 cactcaaaaagaaaatgaaa 222 |||||||||||||||||||| Sbjct: 43307 cactcaaaaagaaaatgaaa 43288
>dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0528B09 Length = 156897 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Minus Query: 209 aaaagaaaatgaaaaa--tatatgaaatgat 237 |||||||||||||||| ||||||||||||| Sbjct: 107350 aaaagaaaatgaaaaaaatatatgaaatgat 107320
>gb|AC002126.1|AC002126 Homo sapiens DNA from chromosome 19-cosmids R30102:R29350:R27740 containing MEF2B, genomic sequence, complete sequence Length = 89818 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ctcaaaaagaaaatgaaaaa 224 |||||||||||||||||||| Sbjct: 24227 ctcaaaaagaaaatgaaaaa 24208
>emb|CT009542.22| Pig DNA sequence from clone CH242-272H8 on chromosome 7, complete sequence Length = 177899 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gggaaggacagggcaacaga 71 |||||||||||||||||||| Sbjct: 38679 gggaaggacagggcaacaga 38660
>gb|AC008160.11|AC008160 Mus musculus, clone 187_J_17, complete sequence Length = 206383 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 383 gatgtcttcttcttaggcagatgc 406 |||||||||| ||||||||||||| Sbjct: 6636 gatgtcttctccttaggcagatgc 6613
>emb|AL844512.16| Zebrafish DNA sequence from clone DKEY-8M7, complete sequence Length = 231383 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 aaaaagaaaatgaaaaatat 227 |||||||||||||||||||| Sbjct: 64051 aaaaagaaaatgaaaaatat 64070
>gb|AY727399.1| Minuartia cumberlandensis rpL16 gene, intron; chloroplast Length = 918 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 209 aaaagaaaatgaaaaatatatgaa 232 |||||||||| ||||||||||||| Sbjct: 627 aaaagaaaatcaaaaatatatgaa 604
>gb|AY727398.1| Minuartia glabra rpL16 gene, intron; chloroplast Length = 928 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 209 aaaagaaaatgaaaaatatatgaa 232 |||||||||| ||||||||||||| Sbjct: 627 aaaagaaaatcaaaaatatatgaa 604
>emb|BX005017.13| Zebrafish DNA sequence from clone DKEY-200P10 in linkage group 12, complete sequence Length = 111448 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 aaaagaaaatgaaaaatata 228 |||||||||||||||||||| Sbjct: 95486 aaaagaaaatgaaaaatata 95505
>gb|AC109199.10| Mus musculus chromosome 1, clone RP23-29D20, complete sequence Length = 194339 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ctcaaaaagaaaatgaaaaa 224 |||||||||||||||||||| Sbjct: 116998 ctcaaaaagaaaatgaaaaa 116979
>gb|AE003673.3| Drosophila melanogaster chromosome 3R, section 11 of 118 of the complete sequence Length = 308146 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tcaaaaagaaaatgaaaaat 225 |||||||||||||||||||| Sbjct: 56211 tcaaaaagaaaatgaaaaat 56192
>emb|AJ969073.1| Spiroplasma citri pSci5 plasmid Length = 27778 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 aaaaagaaaatgaaaaatat 227 |||||||||||||||||||| Sbjct: 21425 aaaaagaaaatgaaaaatat 21444
>emb|AJ969071.1| Spiroplasma citri pSci3 plasmid Length = 19325 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 aaaaagaaaatgaaaaatat 227 |||||||||||||||||||| Sbjct: 17848 aaaaagaaaatgaaaaatat 17867
>emb|AL928829.6| Mouse DNA sequence from clone RP23-390B17 on chromosome 2, complete sequence Length = 162437 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 aagaaagagctttatgaggggaaa 122 |||||||||||||||||| ||||| Sbjct: 33304 aagaaagagctttatgagtggaaa 33327
>emb|CR925730.6| Zebrafish DNA sequence from clone DKEY-277M11 in linkage group 10, complete sequence Length = 34855 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 aaagaaaatgaaaaatatat 229 |||||||||||||||||||| Sbjct: 6943 aaagaaaatgaaaaatatat 6924
>dbj|AP002832.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-651F18, complete sequence Length = 117898 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ctttagactctggaagaaag 105 |||||||||||||||||||| Sbjct: 57020 ctttagactctggaagaaag 57039
>emb|AL935268.6| Zebrafish DNA sequence from clone CH211-199H23 in linkage group 12, complete sequence Length = 206438 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 agcagaccaagaataacccc 377 |||||||||||||||||||| Sbjct: 162038 agcagaccaagaataacccc 162019
>gb|AC005821.1|AC005821 Homo sapiens chromosome 17, clone hRPK.156_L_14, complete sequence Length = 174428 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 ctcaaaaagaaaatgaaaaa 224 |||||||||||||||||||| Sbjct: 76565 ctcaaaaagaaaatgaaaaa 76546
>dbj|AK112371.1| Ciona intestinalis cDNA, clone:ciad040h07, full insert sequence Length = 2448 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 aaaatgaaaaatatatgaaa 233 |||||||||||||||||||| Sbjct: 2414 aaaatgaaaaatatatgaaa 2433
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 aaaatgaaaaatatatgaaa 233 |||||||||||||||||||| Sbjct: 21838396 aaaatgaaaaatatatgaaa 21838377
>gb|AC001654.1|AC001654 Drosophila melanogaster DNA sequence (P1 DS00189 (D16)), complete sequence Length = 12976 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tcaaaaagaaaatgaaaaat 225 |||||||||||||||||||| Sbjct: 6185 tcaaaaagaaaatgaaaaat 6166
>gb|AC132382.3| Mus musculus BAC clone RP23-425E9 from 8, complete sequence Length = 218283 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 caatttgggaaggacagggc 65 |||||||||||||||||||| Sbjct: 178927 caatttgggaaggacagggc 178946
>dbj|AP004284.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1268B10 Length = 145226 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 aaaagaaaatgaaaaatatatgaa 232 |||||||||| ||||||||||||| Sbjct: 34090 aaaagaaaattaaaaatatatgaa 34113
>dbj|AP004580.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1461G7 Length = 168155 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 aaaagaaaatgaaaaatatatgaa 232 |||||||||| ||||||||||||| Sbjct: 162406 aaaagaaaattaaaaatatatgaa 162429 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,217,796 Number of Sequences: 3902068 Number of extensions: 5217796 Number of successful extensions: 148977 Number of sequences better than 10.0: 136 Number of HSP's better than 10.0 without gapping: 134 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 148352 Number of HSP's gapped (non-prelim): 621 length of query: 435 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 413 effective length of database: 17,147,199,772 effective search space: 7081793505836 effective search space used: 7081793505836 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
