ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags27g23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467397.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1136 Score = 337 bits (170), Expect = 3e-89 Identities = 383/454 (84%) Strand = Plus / Minus Query: 181 ctcacaatctgttgttcttcatcagctccacaaattcaccaaacgccaagtctgagtcat 240 |||||||||||||||||||||||| ||| | |||||||||||| |||||||| || |||| Sbjct: 653 ctcacaatctgttgttcttcatcatctctataaattcaccaaaagccaagtcagaatcat 594 Query: 241 ggggccccggggaggactccggatggtactggagagacataagcttcatcttggggaaca 300 | ||||| || |||||||| ||||||||||| ||||||| ||| |||||||| ||| || Sbjct: 593 gcggcccgggtgaggactctggatggtactgaagagacaaaagtttcatcttagggtact 534 Query: 301 caagaccagcacagctctggtcatttaggttgatgtgtgttacttgtactccttccggga 360 ||| || |||||||| | || || || ||||| |||||||||| || ||||| || | Sbjct: 533 gaaggccggcacagctattatcgttgagattgatatgtgttactttcaccccttctggaa 474 Query: 361 gcgattctgggtccacagcatagttatggttctgtgcactgatgtctacacgtccggtcc 420 | || |||||||| |||||||| |||||||| |||||||| ||||| |||||||| | | Sbjct: 473 gtgactctgggtcaacagcataattatggttttgtgcacttatgtcgacacgtccacttc 414 Query: 421 tgttgtcacgaactggatggtttcctccgtgatgaccaaatttcattttaaacgtctttc 480 ||||| ||| ||||| |||||||| ||||||||||| ||||||||||| ||||| | Sbjct: 413 gaaggtcacaaacaggatgatttcctccatgatgaccaaacttcattttaaatgtcttcc 354 Query: 481 caccaagagcctgaccaatcaattgatgtcccatgcaaatgccaaatactgggaccttcc 540 |||||||||| || ||||||||||| || ||||| || |||||||| || || ||||||| Sbjct: 353 caccaagagcttgcccaatcaattggtggcccatacagatgccaaacacaggaaccttcc 294 Query: 541 ctactatttcttgtactgttttcacggcatatggaactgcagctgggtcaccagggccat 600 ||| ||||||||||||||| ||||| |||||||||||||||||||| || ||||| |||| Sbjct: 293 ctattatttcttgtactgtcttcacagcatatggaactgcagctggatctccaggaccat 234 Query: 601 tactaaaaagaacaccatcaggcttcaaattaag 634 | ||||||| ||||||||||||||||| ||||| Sbjct: 233 tgctaaaaaacacaccatcaggcttcaagttaag 200
>dbj|AK059653.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-C09, full insert sequence Length = 1136 Score = 337 bits (170), Expect = 3e-89 Identities = 383/454 (84%) Strand = Plus / Minus Query: 181 ctcacaatctgttgttcttcatcagctccacaaattcaccaaacgccaagtctgagtcat 240 |||||||||||||||||||||||| ||| | |||||||||||| |||||||| || |||| Sbjct: 653 ctcacaatctgttgttcttcatcatctctataaattcaccaaaagccaagtcagaatcat 594 Query: 241 ggggccccggggaggactccggatggtactggagagacataagcttcatcttggggaaca 300 | ||||| || |||||||| ||||||||||| ||||||| ||| |||||||| ||| || Sbjct: 593 gcggcccgggtgaggactctggatggtactgaagagacaaaagtttcatcttagggtacc 534 Query: 301 caagaccagcacagctctggtcatttaggttgatgtgtgttacttgtactccttccggga 360 ||| || |||||||| | || || || ||||| |||||||||| || ||||| || | Sbjct: 533 gaaggccggcacagctattatcgttgagattgatatgtgttactttcaccccttctggaa 474 Query: 361 gcgattctgggtccacagcatagttatggttctgtgcactgatgtctacacgtccggtcc 420 | || |||||||| |||||||| |||||||| |||||||| ||||| |||||||| | | Sbjct: 473 gtgactctgggtcaacagcataattatggttttgtgcacttatgtcgacacgtccacttc 414 Query: 421 tgttgtcacgaactggatggtttcctccgtgatgaccaaatttcattttaaacgtctttc 480 ||||| ||| ||||| |||||||| ||||||||||| ||||||||||| ||||| | Sbjct: 413 gaaggtcacaaacaggatgatttcctccatgatgaccaaacttcattttaaatgtcttcc 354 Query: 481 caccaagagcctgaccaatcaattgatgtcccatgcaaatgccaaatactgggaccttcc 540 |||||||||| || ||||||||||| || ||||| || |||||||| || || ||||||| Sbjct: 353 caccaagagcttgcccaatcaattggtggcccatacagatgccaaacacaggaaccttcc 294 Query: 541 ctactatttcttgtactgttttcacggcatatggaactgcagctgggtcaccagggccat 600 ||| ||||||||||||||| ||||| |||||||||||||||||||| || ||||| |||| Sbjct: 293 ctattatttcttgtactgtcttcacagcatatggaactgcagctggatctccaggaccat 234 Query: 601 tactaaaaagaacaccatcaggcttcaaattaag 634 | ||||||| ||||||||||||||||| ||||| Sbjct: 233 tgctaaaaaacacaccatcaggcttcaagttaag 200
>ref|XM_467396.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1772 Score = 210 bits (106), Expect = 4e-51 Identities = 184/210 (87%) Strand = Plus / Minus Query: 425 gtcacgaactggatggtttcctccgtgatgaccaaatttcattttaaacgtctttccacc 484 ||||| ||| ||||| |||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 1200 gtcacaaacaggatgatttcctccatgatgaccaaacttcattttaaatgtcttcccacc 1141 Query: 485 aagagcctgaccaatcaattgatgtcccatgcaaatgccaaatactgggaccttccctac 544 |||||| || ||||||||||| || ||||| || |||||||| || || |||||||||| Sbjct: 1140 aagagcttgcccaatcaattggtggcccatacagatgccaaacacaggaaccttccctat 1081 Query: 545 tatttcttgtactgttttcacggcatatggaactgcagctgggtcaccagggccattact 604 ||||||||||||||| ||||| |||||||||||||||||||| || ||||| ||||| || Sbjct: 1080 tatttcttgtactgtcttcacagcatatggaactgcagctggatctccaggaccattgct 1021 Query: 605 aaaaagaacaccatcaggcttcaaattaag 634 ||||| ||||||||||||||||| ||||| Sbjct: 1020 aaaaaacacaccatcaggcttcaagttaag 991 Score = 145 bits (73), Expect = 2e-31 Identities = 178/213 (83%) Strand = Plus / Minus Query: 181 ctcacaatctgttgttcttcatcagctccacaaattcaccaaacgccaagtctgagtcat 240 |||||||||||||||||||||||| ||| | |||||||||||| |||||||| || |||| Sbjct: 1554 ctcacaatctgttgttcttcatcatctctataaattcaccaaaagccaagtcagaatcat 1495 Query: 241 ggggccccggggaggactccggatggtactggagagacataagcttcatcttggggaaca 300 | ||||| || |||||||| ||||||||||| ||||||| ||| |||||||| ||| || Sbjct: 1494 gcggcccgggtgaggactctggatggtactgaagagacaaaagtttcatcttagggtact 1435 Query: 301 caagaccagcacagctctggtcatttaggttgatgtgtgttacttgtactccttccggga 360 ||| || |||||||| | || || || ||||| |||||||||| || ||||| || | Sbjct: 1434 gaaggccggcacagctattatcgttgagattgatatgtgttactttcaccccttctggaa 1375 Query: 361 gcgattctgggtccacagcatagttatggttct 393 | || |||||||| |||||||| |||||||||| Sbjct: 1374 gtgactctgggtcaacagcataattatggttct 1342
>ref|XM_467395.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1737 Score = 210 bits (106), Expect = 4e-51 Identities = 184/210 (87%) Strand = Plus / Minus Query: 425 gtcacgaactggatggtttcctccgtgatgaccaaatttcattttaaacgtctttccacc 484 ||||| ||| ||||| |||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 1194 gtcacaaacaggatgatttcctccatgatgaccaaacttcattttaaatgtcttcccacc 1135 Query: 485 aagagcctgaccaatcaattgatgtcccatgcaaatgccaaatactgggaccttccctac 544 |||||| || ||||||||||| || ||||| || |||||||| || || |||||||||| Sbjct: 1134 aagagcttgcccaatcaattggtggcccatacagatgccaaacacaggaaccttccctat 1075 Query: 545 tatttcttgtactgttttcacggcatatggaactgcagctgggtcaccagggccattact 604 ||||||||||||||| ||||| |||||||||||||||||||| || ||||| ||||| || Sbjct: 1074 tatttcttgtactgtcttcacagcatatggaactgcagctggatctccaggaccattgct 1015 Query: 605 aaaaagaacaccatcaggcttcaaattaag 634 ||||| ||||||||||||||||| ||||| Sbjct: 1014 aaaaaacacaccatcaggcttcaagttaag 985 Score = 141 bits (71), Expect = 3e-30 Identities = 176/211 (83%) Strand = Plus / Minus Query: 181 ctcacaatctgttgttcttcatcagctccacaaattcaccaaacgccaagtctgagtcat 240 |||||||||||||||||||||||| ||| | |||||||||||| |||||||| || |||| Sbjct: 1519 ctcacaatctgttgttcttcatcatctctataaattcaccaaaagccaagtcagaatcat 1460 Query: 241 ggggccccggggaggactccggatggtactggagagacataagcttcatcttggggaaca 300 | ||||| || |||||||| ||||||||||| ||||||| ||| |||||||| ||| || Sbjct: 1459 gcggcccgggtgaggactctggatggtactgaagagacaaaagtttcatcttagggtact 1400 Query: 301 caagaccagcacagctctggtcatttaggttgatgtgtgttacttgtactccttccggga 360 ||| || |||||||| | || || || ||||| |||||||||| || ||||| || | Sbjct: 1399 gaaggccggcacagctattatcgttgagattgatatgtgttactttcaccccttctggaa 1340 Query: 361 gcgattctgggtccacagcatagttatggtt 391 | || |||||||| |||||||| |||||||| Sbjct: 1339 gtgactctgggtcaacagcataattatggtt 1309
>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence Length = 158050 Score = 210 bits (106), Expect = 4e-51 Identities = 184/210 (87%) Strand = Plus / Plus Query: 425 gtcacgaactggatggtttcctccgtgatgaccaaatttcattttaaacgtctttccacc 484 ||||| ||| ||||| |||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 71107 gtcacaaacaggatgatttcctccatgatgaccaaacttcattttaaatgtcttcccacc 71166 Query: 485 aagagcctgaccaatcaattgatgtcccatgcaaatgccaaatactgggaccttccctac 544 |||||| || ||||||||||| || ||||| || |||||||| || || |||||||||| Sbjct: 71167 aagagcttgcccaatcaattggtggcccatacagatgccaaacacaggaaccttccctat 71226 Query: 545 tatttcttgtactgttttcacggcatatggaactgcagctgggtcaccagggccattact 604 ||||||||||||||| ||||| |||||||||||||||||||| || ||||| ||||| || Sbjct: 71227 tatttcttgtactgtcttcacagcatatggaactgcagctggatctccaggaccattgct 71286 Query: 605 aaaaagaacaccatcaggcttcaaattaag 634 ||||| ||||||||||||||||| ||||| Sbjct: 71287 aaaaaacacaccatcaggcttcaagttaag 71316 Score = 89.7 bits (45), Expect = 1e-14 Identities = 138/169 (81%) Strand = Plus / Plus Query: 226 ccaagtctgagtcatggggccccggggaggactccggatggtactggagagacataagct 285 ||||||| || ||||| ||||| || |||||||| ||||||||||| ||||||| ||| | Sbjct: 70135 ccaagtcagaatcatgcggcccgggtgaggactctggatggtactgaagagacaaaagtt 70194 Query: 286 tcatcttggggaacacaagaccagcacagctctggtcatttaggttgatgtgtgttactt 345 ||||||| ||| || ||| || |||||||| | || || || ||||| |||||||||| Sbjct: 70195 tcatcttagggtactgaaggccggcacagctattatcgttgagattgatatgtgttactt 70254 Query: 346 gtactccttccgggagcgattctgggtccacagcatagttatggttctg 394 || ||||| || || || |||||||| |||||||| ||||||||||| Sbjct: 70255 tcaccccttctggaagtgactctgggtcaacagcataattatggttctg 70303 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 181 ctcacaatctgttgttcttcatcagctccacaaattcaccaaa 223 |||||||||||||||||||||||| ||| | |||||||||||| Sbjct: 69978 ctcacaatctgttgttcttcatcatctctataaattcaccaaa 70020
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 210 bits (106), Expect = 4e-51 Identities = 184/210 (87%) Strand = Plus / Minus Query: 425 gtcacgaactggatggtttcctccgtgatgaccaaatttcattttaaacgtctttccacc 484 ||||| ||| ||||| |||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 29291524 gtcacaaacaggatgatttcctccatgatgaccaaacttcattttaaatgtcttcccacc 29291465 Query: 485 aagagcctgaccaatcaattgatgtcccatgcaaatgccaaatactgggaccttccctac 544 |||||| || ||||||||||| || ||||| || |||||||| || || |||||||||| Sbjct: 29291464 aagagcttgcccaatcaattggtggcccatacagatgccaaacacaggaaccttccctat 29291405 Query: 545 tatttcttgtactgttttcacggcatatggaactgcagctgggtcaccagggccattact 604 ||||||||||||||| ||||| |||||||||||||||||||| || ||||| ||||| || Sbjct: 29291404 tatttcttgtactgtcttcacagcatatggaactgcagctggatctccaggaccattgct 29291345 Query: 605 aaaaagaacaccatcaggcttcaaattaag 634 ||||| ||||||||||||||||| ||||| Sbjct: 29291344 aaaaaacacaccatcaggcttcaagttaag 29291315 Score = 89.7 bits (45), Expect = 1e-14 Identities = 138/169 (81%) Strand = Plus / Minus Query: 226 ccaagtctgagtcatggggccccggggaggactccggatggtactggagagacataagct 285 ||||||| || ||||| ||||| || |||||||| ||||||||||| ||||||| ||| | Sbjct: 29292496 ccaagtcagaatcatgcggcccgggtgaggactctggatggtactgaagagacaaaagtt 29292437 Query: 286 tcatcttggggaacacaagaccagcacagctctggtcatttaggttgatgtgtgttactt 345 ||||||| ||| || ||| || |||||||| | || || || ||||| |||||||||| Sbjct: 29292436 tcatcttagggtactgaaggccggcacagctattatcgttgagattgatatgtgttactt 29292377 Query: 346 gtactccttccgggagcgattctgggtccacagcatagttatggttctg 394 || ||||| || || || |||||||| |||||||| ||||||||||| Sbjct: 29292376 tcaccccttctggaagtgactctgggtcaacagcataattatggttctg 29292328 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 181 ctcacaatctgttgttcttcatcagctccacaaattcaccaaa 223 |||||||||||||||||||||||| ||| | |||||||||||| Sbjct: 29292653 ctcacaatctgttgttcttcatcatctctataaattcaccaaa 29292611
>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0060O16 Length = 164373 Score = 210 bits (106), Expect = 4e-51 Identities = 184/210 (87%) Strand = Plus / Minus Query: 425 gtcacgaactggatggtttcctccgtgatgaccaaatttcattttaaacgtctttccacc 484 ||||| ||| ||||| |||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 88869 gtcacaaacaggatgatttcctccatgatgaccaaacttcattttaaatgtcttcccacc 88810 Query: 485 aagagcctgaccaatcaattgatgtcccatgcaaatgccaaatactgggaccttccctac 544 |||||| || ||||||||||| || ||||| || |||||||| || || |||||||||| Sbjct: 88809 aagagcttgcccaatcaattggtggcccatacagatgccaaacacaggaaccttccctat 88750 Query: 545 tatttcttgtactgttttcacggcatatggaactgcagctgggtcaccagggccattact 604 ||||||||||||||| ||||| |||||||||||||||||||| || ||||| ||||| || Sbjct: 88749 tatttcttgtactgtcttcacagcatatggaactgcagctggatctccaggaccattgct 88690 Query: 605 aaaaagaacaccatcaggcttcaaattaag 634 ||||| ||||||||||||||||| ||||| Sbjct: 88689 aaaaaacacaccatcaggcttcaagttaag 88660 Score = 89.7 bits (45), Expect = 1e-14 Identities = 138/169 (81%) Strand = Plus / Minus Query: 226 ccaagtctgagtcatggggccccggggaggactccggatggtactggagagacataagct 285 ||||||| || ||||| ||||| || |||||||| ||||||||||| ||||||| ||| | Sbjct: 89841 ccaagtcagaatcatgcggcccgggtgaggactctggatggtactgaagagacaaaagtt 89782 Query: 286 tcatcttggggaacacaagaccagcacagctctggtcatttaggttgatgtgtgttactt 345 ||||||| ||| || ||| || |||||||| | || || || ||||| |||||||||| Sbjct: 89781 tcatcttagggtactgaaggccggcacagctattatcgttgagattgatatgtgttactt 89722 Query: 346 gtactccttccgggagcgattctgggtccacagcatagttatggttctg 394 || ||||| || || || |||||||| |||||||| ||||||||||| Sbjct: 89721 tcaccccttctggaagtgactctgggtcaacagcataattatggttctg 89673 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 181 ctcacaatctgttgttcttcatcagctccacaaattcaccaaa 223 |||||||||||||||||||||||| ||| | |||||||||||| Sbjct: 89998 ctcacaatctgttgttcttcatcatctctataaattcaccaaa 89956
>dbj|AK102055.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082C21, full insert sequence Length = 1772 Score = 210 bits (106), Expect = 4e-51 Identities = 184/210 (87%) Strand = Plus / Minus Query: 425 gtcacgaactggatggtttcctccgtgatgaccaaatttcattttaaacgtctttccacc 484 ||||| ||| ||||| |||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 1200 gtcacaaacaggatgatttcctccatgatgaccaaacttcattttaaatgtcttcccacc 1141 Query: 485 aagagcctgaccaatcaattgatgtcccatgcaaatgccaaatactgggaccttccctac 544 |||||| || ||||||||||| || ||||| || |||||||| || || |||||||||| Sbjct: 1140 aagagcttgcccaatcaattggtggcccatacagatgccaaacacaggaaccttccctat 1081 Query: 545 tatttcttgtactgttttcacggcatatggaactgcagctgggtcaccagggccattact 604 ||||||||||||||| ||||| |||||||||||||||||||| || ||||| ||||| || Sbjct: 1080 tatttcttgtactgtcttcacagcatatggaactgcagctggatctccaggaccattgct 1021 Query: 605 aaaaagaacaccatcaggcttcaaattaag 634 ||||| ||||||||||||||||| ||||| Sbjct: 1020 aaaaaacacaccatcaggcttcaagttaag 991 Score = 145 bits (73), Expect = 2e-31 Identities = 178/213 (83%) Strand = Plus / Minus Query: 181 ctcacaatctgttgttcttcatcagctccacaaattcaccaaacgccaagtctgagtcat 240 |||||||||||||||||||||||| ||| | |||||||||||| |||||||| || |||| Sbjct: 1554 ctcacaatctgttgttcttcatcatctctataaattcaccaaaagccaagtcagaatcat 1495 Query: 241 ggggccccggggaggactccggatggtactggagagacataagcttcatcttggggaaca 300 | ||||| || |||||||| ||||||||||| ||||||| ||| |||||||| ||| || Sbjct: 1494 gcggcccgggtgaggactctggatggtactgaagagacaaaagtttcatcttagggtact 1435 Query: 301 caagaccagcacagctctggtcatttaggttgatgtgtgttacttgtactccttccggga 360 ||| || |||||||| | || || || ||||| |||||||||| || ||||| || | Sbjct: 1434 gaaggccggcacagctattatcgttgagattgatatgtgttactttcaccccttctggaa 1375 Query: 361 gcgattctgggtccacagcatagttatggttct 393 | || |||||||| |||||||| |||||||||| Sbjct: 1374 gtgactctgggtcaacagcataattatggttct 1342
>dbj|AK059630.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-A02, full insert sequence Length = 1735 Score = 210 bits (106), Expect = 4e-51 Identities = 184/210 (87%) Strand = Plus / Minus Query: 425 gtcacgaactggatggtttcctccgtgatgaccaaatttcattttaaacgtctttccacc 484 ||||| ||| ||||| |||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 1194 gtcacaaacaggatgatttcctccatgatgaccaaacttcattttaaatgtcttcccacc 1135 Query: 485 aagagcctgaccaatcaattgatgtcccatgcaaatgccaaatactgggaccttccctac 544 |||||| || ||||||||||| || ||||| || |||||||| || || |||||||||| Sbjct: 1134 aagagcttgcccaatcaattggtggcccatacagatgccaaacacaggaaccttccctat 1075 Query: 545 tatttcttgtactgttttcacggcatatggaactgcagctgggtcaccagggccattact 604 ||||||||||||||| ||||| |||||||||||||||||||| || ||||| ||||| || Sbjct: 1074 tatttcttgtactgtcttcacagcatatggaactgcagctggatctccaggaccattgct 1015 Query: 605 aaaaagaacaccatcaggcttcaaattaag 634 ||||| ||||||||||||||||| ||||| Sbjct: 1014 aaaaaacacaccatcaggcttcaagttaag 985 Score = 127 bits (64), Expect = 5e-26 Identities = 175/211 (82%), Gaps = 2/211 (0%) Strand = Plus / Minus Query: 181 ctcacaatctgttgttcttcatcagctccacaaattcaccaaacgccaagtctgagtcat 240 |||||||||||||||||||||||| ||| | |||||||||||| |||||||| || |||| Sbjct: 1517 ctcacaatctgttgttcttcatcatctctataaattcaccaaaagccaagtcagaatcat 1458 Query: 241 ggggccccggggaggactccggatggtactggagagacataagcttcatcttggggaaca 300 | ||||| || |||||||| ||||||||||| ||||||| ||| |||||||| ||| || Sbjct: 1457 gcggcccgggtgaggactctggatggtactgaagagacaaaagtttcatcttagggtact 1398 Query: 301 caagaccagcacagctctggtcatttaggttgatgtgtgttacttgtactccttccggga 360 ||| || |||||| || || || || ||||| |||||||||| || ||||| || | Sbjct: 1397 gaaggccggcacag--cttatcgttgagattgatatgtgttactttcaccccttctggaa 1340 Query: 361 gcgattctgggtccacagcatagttatggtt 391 | || |||||||| |||||||| |||||||| Sbjct: 1339 gtgactctgggtcaacagcataattatggtt 1309
>gb|AY107740.1| Zea mays PCO072185 mRNA sequence Length = 1794 Score = 186 bits (94), Expect = 6e-44 Identities = 160/182 (87%) Strand = Plus / Minus Query: 450 tgatgaccaaatttcattttaaacgtctttccaccaagagcctgaccaatcaattgatgt 509 ||||| ||||||||||||||||| ||||| |||||||||||||| ||||||||||| || Sbjct: 1110 tgatgtccaaatttcattttaaatgtcttcccaccaagagcctgcccaatcaattggtgg 1051 Query: 510 cccatgcaaatgccaaatactgggaccttccctactatttcttgtactgttttcacggca 569 ||||| || |||||||| || || |||||||| | |||||| ||||| || ||||| ||| Sbjct: 1050 cccatacagatgccaaaaacaggaaccttcccaattatttcctgtaccgtcttcacagca 991 Query: 570 tatggaactgcagctgggtcaccagggccattactaaaaagaacaccatcaggcttcaaa 629 || |||||||||||||| || ||||| ||||| ||||||||||||||||||||||||||| Sbjct: 990 tagggaactgcagctggatccccaggaccattgctaaaaagaacaccatcaggcttcaaa 931 Query: 630 tt 631 || Sbjct: 930 tt 929 Score = 135 bits (68), Expect = 2e-28 Identities = 191/232 (82%) Strand = Plus / Minus Query: 184 acaatctgttgttcttcatcagctccacaaattcaccaaacgccaagtctgagtcatggg 243 ||||||||||| ||||||| ||||| | ||| || || || || ||| |||||||| | Sbjct: 1376 acaatctgttgctcttcatgagctctataaactcgccgaaggctgtgtcggagtcatgcg 1317 Query: 244 gccccggggaggactccggatggtactggagagacataagcttcatcttggggaacacaa 303 | || ||||| ||||| |||||||||||||||||||||||||||||||||| | || | Sbjct: 1316 gaccaggggaagactcgggatggtactggagagacataagcttcatcttggagtactgga 1257 Query: 304 gaccagcacagctctggtcatttaggttgatgtgtgttacttgtactccttccgggagcg 363 | ||||| || || | || || || |||| ||| ||||||| | ||||||| ||||| | Sbjct: 1256 ggccagcgcaactattatcgttgagattgacgtgagttacttttgctccttctgggagtg 1197 Query: 364 attctgggtccacagcatagttatggttctgtgcactgatgtctacacgtcc 415 |||||||||| || || |||||||||||||||||||| |||||||||||||| Sbjct: 1196 attctgggtcaactgcgtagttatggttctgtgcacttatgtctacacgtcc 1145
>gb|BT016520.1| Zea mays clone Contig353 mRNA sequence Length = 1712 Score = 184 bits (93), Expect = 2e-43 Identities = 159/181 (87%) Strand = Plus / Minus Query: 451 gatgaccaaatttcattttaaacgtctttccaccaagagcctgaccaatcaattgatgtc 510 |||| ||||||||||||||||| ||||| |||||||||||||| ||||||||||| || | Sbjct: 1091 gatgtccaaatttcattttaaatgtcttcccaccaagagcctgcccaatcaattggtggc 1032 Query: 511 ccatgcaaatgccaaatactgggaccttccctactatttcttgtactgttttcacggcat 570 |||| || |||||||| || || |||||||| | |||||| ||||| || ||||| |||| Sbjct: 1031 ccatacagatgccaaaaacaggaaccttcccaattatttcctgtaccgtcttcacagcat 972 Query: 571 atggaactgcagctgggtcaccagggccattactaaaaagaacaccatcaggcttcaaat 630 | |||||||||||||| || ||||| ||||| |||||||||||||||||||||||||||| Sbjct: 971 agggaactgcagctggatccccaggaccattgctaaaaagaacaccatcaggcttcaaat 912 Query: 631 t 631 | Sbjct: 911 t 911 Score = 135 bits (68), Expect = 2e-28 Identities = 191/232 (82%) Strand = Plus / Minus Query: 184 acaatctgttgttcttcatcagctccacaaattcaccaaacgccaagtctgagtcatggg 243 ||||||||||| ||||||| ||||| | ||| || || || || ||| |||||||| | Sbjct: 1359 acaatctgttgctcttcatgagctctataaactcgccgaaggctgtgtcggagtcatgcg 1300 Query: 244 gccccggggaggactccggatggtactggagagacataagcttcatcttggggaacacaa 303 | || ||||| ||||| |||||||||||||||||||||||||||||||||| | || | Sbjct: 1299 gaccaggggaagactcgggatggtactggagagacataagcttcatcttggagtactgga 1240 Query: 304 gaccagcacagctctggtcatttaggttgatgtgtgttacttgtactccttccgggagcg 363 | ||||| || || | || || || |||| ||| ||||||| | ||||||| ||||| | Sbjct: 1239 ggccagcgcaactattatcgttgagattgacgtgagttacttttgctccttctgggagtg 1180 Query: 364 attctgggtccacagcatagttatggttctgtgcactgatgtctacacgtcc 415 |||||||||| || || |||||||||||||||||||| |||||||||||||| Sbjct: 1179 attctgggtcaactgcgtagttatggttctgtgcacttatgtctacacgtcc 1128
>emb|BX824853.1|CNS0A5IH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH77ZG09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1525 Score = 93.7 bits (47), Expect = 7e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 396 gcactgatgtctacacgtccggtcctgttgtcacgaactggatggtttcctccgtgatga 455 |||||||| || ||| | ||||| ||||||| ||||||||||||||||||||| |||||| Sbjct: 948 gcactgatctcgacatggccggttctgttgttacgaactggatggtttcctccatgatga 889 Query: 456 ccaaatttcattttaaacgtctttccaccaagagc 490 ||||||||||| ||||| || || || |||||||| Sbjct: 888 ccaaatttcatcttaaaggttttacctccaagagc 854
>emb|BX824789.1|CNS0A5HD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH72ZD06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1581 Score = 93.7 bits (47), Expect = 7e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 396 gcactgatgtctacacgtccggtcctgttgtcacgaactggatggtttcctccgtgatga 455 |||||||| || ||| | ||||| ||||||| ||||||||||||||||||||| |||||| Sbjct: 949 gcactgatctcgacatggccggttctgttgttacgaactggatggtttcctccatgatga 890 Query: 456 ccaaatttcattttaaacgtctttccaccaagagc 490 ||||||||||| ||||| || || || |||||||| Sbjct: 889 ccaaatttcatcttaaaggttttacctccaagagc 855
>dbj|AB020749.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRC8 Length = 76816 Score = 93.7 bits (47), Expect = 7e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 396 gcactgatgtctacacgtccggtcctgttgtcacgaactggatggtttcctccgtgatga 455 |||||||| || ||| | ||||| ||||||| ||||||||||||||||||||| |||||| Sbjct: 45678 gcactgatctcgacatggccggttctgttgttacgaactggatggtttcctccatgatga 45619 Query: 456 ccaaatttcattttaaacgtctttccaccaagagc 490 ||||||||||| ||||| || || || |||||||| Sbjct: 45618 ccaaatttcatcttaaaggttttacctccaagagc 45584 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 367 ctgggtccacagcatagttatggtt 391 |||||||||| |||||||||||||| Sbjct: 45978 ctgggtccactgcatagttatggtt 45954
>emb|AJ319873.1|NTA319873 Nicotiana tabacum mRNA for carbamoyl phosphate synthase small subunit Length = 1698 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 429 cgaactggatggtttcctccgtgatgaccaaatttcattttaaacgtctt 478 ||||| |||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 1086 cgaacaggatggtttcctccatgatgaccaaatttcattttgaatgtctt 1037
>ref|NM_113690.2| Arabidopsis thaliana CARA (CARBAMOYL PHOSPHATE SYNTHETASE A); ATP binding / carbamoyl-phosphate synthase (glutamine-hydrolyzing)/ carbamoyl-phosphat> AT3G27740 (CARA) mRNA, complete cds Length = 1576 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 378 gcatagttatggttctgtgcactgatgtctacacgtccggtcctgttgtcacgaactgga 437 |||||||| || ||||| |||||||| || || | || || ||||||| ||||||||| Sbjct: 1165 gcatagttgtgattctgagcactgatctccacctgaccagttctgttgttacgaactggg 1106 Query: 438 tggtttcctccgtgatgaccaaatttcat 466 ||||||||||| ||||||||||| ||||| Sbjct: 1105 tggtttcctccatgatgaccaaacttcat 1077
>gb|AY079315.1| Arabidopsis thaliana putative carbamoyl phosphate synthetase small subunit (At3g27740) mRNA, complete cds Length = 1324 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 378 gcatagttatggttctgtgcactgatgtctacacgtccggtcctgttgtcacgaactgga 437 |||||||| || ||||| |||||||| || || | || || ||||||| ||||||||| Sbjct: 1091 gcatagttgtgattctgagcactgatctccacctgaccagttctgttgttacgaactggg 1032 Query: 438 tggtttcctccgtgatgaccaaatttcat 466 ||||||||||| ||||||||||| ||||| Sbjct: 1031 tggtttcctccatgatgaccaaacttcat 1003
>gb|AY046004.1| Arabidopsis thaliana putative carbamoyl phosphate synthetase small subunit (At3g27740) mRNA, complete cds Length = 1489 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 378 gcatagttatggttctgtgcactgatgtctacacgtccggtcctgttgtcacgaactgga 437 |||||||| || ||||| |||||||| || || | || || ||||||| ||||||||| Sbjct: 1165 gcatagttgtgattctgagcactgatctccacctgaccagttctgttgttacgaactggg 1106 Query: 438 tggtttcctccgtgatgaccaaatttcat 466 ||||||||||| ||||||||||| ||||| Sbjct: 1105 tggtttcctccatgatgaccaaacttcat 1077
>emb|BX824396.1|CNS0A6V7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH46ZC09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1486 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 378 gcatagttatggttctgtgcactgatgtctacacgtccggtcctgttgtcacgaactgga 437 |||||||| || ||||| |||||||| || || | || || ||||||| ||||||||| Sbjct: 1132 gcatagttgtgattctgagcactgatctccacctgaccagttctgttgttacgaactggg 1073 Query: 438 tggtttcctccgtgatgaccaaatttcat 466 ||||||||||| ||||||||||| ||||| Sbjct: 1072 tggtttcctccatgatgaccaaacttcat 1044
>emb|BX823643.1|CNS0A6J4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZH03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1426 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 378 gcatagttatggttctgtgcactgatgtctacacgtccggtcctgttgtcacgaactgga 437 |||||||| || ||||| |||||||| || || | || || ||||||| ||||||||| Sbjct: 1124 gcatagttgtgattctgagcactgatctccacctgaccagttctgttgttacgaactggg 1065 Query: 438 tggtttcctccgtgatgaccaaatttcat 466 ||||||||||| ||||||||||| ||||| Sbjct: 1064 tggtttcctccatgatgaccaaacttcat 1036
>gb|U73175.1|ATU73175 Arabidopsis thaliana carbamoyl phosphate synthetase small subunit mRNA (carA), complete cds Length = 1499 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 378 gcatagttatggttctgtgcactgatgtctacacgtccggtcctgttgtcacgaactgga 437 |||||||| || ||||| |||||||| || || | || || ||||||| ||||||||| Sbjct: 1089 gcatagttgtgattctgagcactgatctccacctgaccagttctgttgttacgaactggg 1030 Query: 438 tggtttcctccgtgatgaccaaatttcat 466 ||||||||||| ||||||||||| ||||| Sbjct: 1029 tggtttcctccatgatgaccaaacttcat 1001
>gb|AC135505.15| Medicago truncatula clone mth2-24j8, complete sequence Length = 124563 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 428 acgaactggatggtttcctccgtgatgaccaaatttcattttaaacgtctttccaccaag 487 |||||| ||||| |||||||| || |||||||||||||| || | ||| | || || | Sbjct: 85816 acgaacaggatgatttcctccatggtgaccaaatttcatcttgtaggtcgtgcctcctaa 85757 Query: 488 agcctgaccaatcaattgatgtcccatgcaaatgccaaa 526 |||||| || | ||||||||||||||||||||| ||||| Sbjct: 85756 agcctggcctagcaattgatgtcccatgcaaatcccaaa 85718
>dbj|AB018114.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGF10 Length = 84702 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 420 ctgttgtcacgaactggatggtttcctccgtgatgaccaaatttcat 466 ||||||| ||||||||| ||||||||||| ||||||||||| ||||| Sbjct: 56865 ctgttgttacgaactgggtggtttcctccatgatgaccaaacttcat 56911
>emb|BX825593.1|CNS0A675 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL46ZE12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 912 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 378 gcatagttatggttctgtgcactgatgtctacacgtccggtcctgttgtcacgaactgga 437 |||||||| || ||||| |||||||| || || | || || ||||||| ||||||||| Sbjct: 511 gcatagttgtgattctgagcactgatctccacctgaccagttctgttgttacgaactggg 452 Query: 438 tggtttcctccgtgatgacca 458 ||||||||||| ||||||||| Sbjct: 451 tggtttcctccatgatgacca 431
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 430 gaactggatggtttcctccgtgatgaccaaatttcatttt 469 |||| |||||||| || ||||||||||||||||||||||| Sbjct: 957406 gaacaggatggttaccaccgtgatgaccaaatttcatttt 957367
>gb|AC137836.25| Medicago truncatula clone mth2-10f14, complete sequence Length = 140197 Score = 50.1 bits (25), Expect = 0.009 Identities = 153/193 (79%), Gaps = 2/193 (1%) Strand = Plus / Plus Query: 428 acgaactggatggtttcctccgtgatgaccaaatttcattttaaacgtctttccaccaag 487 |||||| ||||| |||||||| || |||||||||||||| || | || | || || | Sbjct: 127769 acgaacaggatgatttcctccatggtgaccaaatttcatcttgtaggttgtacctcctaa 127828 Query: 488 agcctgaccaatcaattgatgtcccatgcaaatgccaaatactgggaccttccctactat 547 |||||| || | || |||||||||||||||||| ||||| || || ||||| || | || Sbjct: 127829 agcctggcctagcagttgatgtcccatgcaaattccaaaaacaggcacctttccaatgat 127888 Query: 548 -ttcttgtactgttttcacggcatatggaactgcagctgggtcaccagggccattactaa 606 ||||| |||||||| |||||||| ||||| |||| || || ||||| ||||| || | Sbjct: 127889 attctt-tactgtttcaacggcataaggaacagcagaaggatctccaggaccattgctga 127947 Query: 607 aaagaacaccatc 619 |||| |||||||| Sbjct: 127948 aaagtacaccatc 127960
>dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisum) genomic DNA, complete sequence Length = 640681 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 435 ggatggtttcctccgtgatgaccaaatttcattttaa 471 |||||||| ||||| ||||| |||||||||||||||| Sbjct: 153218 ggatggttgcctccatgatgcccaaatttcattttaa 153254
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 435 ggatggtttcctccgtgatgaccaaatttcatttt 469 |||||||| || ||||| ||||||||||||||||| Sbjct: 29967 ggatggttgccgccgtggtgaccaaatttcatttt 29933
>gb|J01597.1|ECOCARAB Escherichia coli carbamoyl-phosphate synthetase subunit A (carA) and carbamoyl-phosphate synthetase subunit B (carB) genes, complete cds Length = 5227 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 435 ggatggtttcctccgtgatgaccaaatttcatttt 469 |||||||| || ||||| ||||||||||||||||| Sbjct: 1360 ggatggttgccgccgtggtgaccaaatttcatttt 1326
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 435 ggatggtttcctccgtgatgaccaaatttcatttt 469 |||||||| || ||||| ||||||||||||||||| Sbjct: 33164 ggatggttgccgccgtggtgaccaaatttcatttt 33130
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 435 ggatggtttcctccgtgatgaccaaatttcatttt 469 |||||||| || ||||| ||||||||||||||||| Sbjct: 32429 ggatggttgccgccgtggtgaccaaatttcatttt 32395
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 435 ggatggtttcctccgtgatgaccaaatttcatttt 469 |||||||| || ||||| ||||||||||||||||| Sbjct: 30537 ggatggttgccgccgtggtgaccaaatttcatttt 30503
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 435 ggatggtttcctccgtgatgaccaaatttcatttt 469 |||||||| || ||||| ||||||||||||||||| Sbjct: 30537 ggatggttgccgccgtggtgaccaaatttcatttt 30503
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 435 ggatggtttcctccgtgatgaccaaatttcatttt 469 |||||||| || ||||| ||||||||||||||||| Sbjct: 29453 ggatggttgccgccgtggtgaccaaatttcatttt 29419
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 435 ggatggtttcctccgtgatgaccaaatttcatttt 469 |||||||| || ||||| ||||||||||||||||| Sbjct: 34912 ggatggttgccgccgtggtgaccaaatttcatttt 34878
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 435 ggatggtttcctccgtgatgaccaaatttcatttt 469 |||||||| || ||||| ||||||||||||||||| Sbjct: 34911 ggatggttgccgccgtggtgaccaaatttcatttt 34877
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 435 ggatggtttcctccgtgatgaccaaatttcatttt 469 |||||||| || ||||| ||||||||||||||||| Sbjct: 49291 ggatggttgccgccgtggtgaccaaatttcatttt 49257
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 435 ggatggtttcctccgtgatgaccaaatttcatttt 469 |||||||| || ||||| ||||||||||||||||| Sbjct: 30572 ggatggttgccgccgtggtgaccaaatttcatttt 30538
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 435 ggatggtttcctccgtgatgaccaaatttcatttt 469 |||||||| || ||||| ||||||||||||||||| Sbjct: 37703 ggatggttgccgccgtggtgaccaaatttcatttt 37669
>gb|AC098588.3| Homo sapiens BAC clone RP11-291L15 from 4, complete sequence Length = 214945 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 aaatcaacaagaaaaatacaaa 88 |||||||||||||||||||||| Sbjct: 140901 aaatcaacaagaaaaatacaaa 140922
>gb|AC140306.3| Mus musculus BAC clone RP23-386L13 from 8, complete sequence Length = 220059 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 595 ggccattactaaaaagaacaccatca 620 |||||| ||||||||||||||||||| Sbjct: 65764 ggccatcactaaaaagaacaccatca 65789
>ref|NM_179123.2| Arabidopsis thaliana transferase, transferring hexosyl groups AT4G26940 transcript variant AT4G26940.2 mRNA, complete cds Length = 1924 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 cttccactcacaatctgttgt 195 ||||||||||||||||||||| Sbjct: 1303 cttccactcacaatctgttgt 1283
>ref|NM_118828.3| Arabidopsis thaliana transferase, transferring glycosyl groups / transferase, transferring hexosyl groups AT4G26940 transcript variant AT4G26940.1 mRNA, complete cds Length = 2022 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 cttccactcacaatctgttgt 195 ||||||||||||||||||||| Sbjct: 1401 cttccactcacaatctgttgt 1381
>gb|AY434516.1| Bouteloua dimorpha haplotype 2 specimen voucher Columbus 3038 alcohol dehydrogenase (Adh1) gene, exons 4 through 9 and partial cds Length = 924 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 gaacacaagaccagcacagct 316 ||||||||||||||||||||| Sbjct: 587 gaacacaagaccagcacagct 567
>gb|AY434509.1| Bouteloua dimorpha haplotype 1 specimen voucher Columbus 2970 alcohol dehydrogenase (Adh1) gene, exons 4 through 9 and partial cds Length = 917 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 gaacacaagaccagcacagct 316 ||||||||||||||||||||| Sbjct: 591 gaacacaagaccagcacagct 571
>emb|AL008638.1|HS992D9 Human DNA sequence from clone CTA-992D9 on chromosome 22q12.1, complete sequence Length = 155147 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 cccaacctttcttccactcac 185 ||||||||||||||||||||| Sbjct: 3183 cccaacctttcttccactcac 3203
>emb|CR933104.2| Medicago truncatula chromosome 5 clone mth2-25b3, COMPLETE SEQUENCE Length = 117135 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 333 atgtgtgttacttgtactccttccg 357 |||||||| |||||||||||||||| Sbjct: 63672 atgtgtgtgacttgtactccttccg 63648
>gb|BC055654.1| Danio rerio zgc:66432, mRNA (cDNA clone MGC:66432 IMAGE:2599624), complete cds Length = 2172 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 caacaagaaaaatacaaactc 91 ||||||||||||||||||||| Sbjct: 126 caacaagaaaaatacaaactc 106
>ref|NM_199838.1| Danio rerio zgc:66432 (zgc:66432), mRNA Length = 2172 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 caacaagaaaaatacaaactc 91 ||||||||||||||||||||| Sbjct: 126 caacaagaaaaatacaaactc 106
>gb|DQ173293.1| Ictalurus punctatus CC chemokine SCYA119 gene, complete cds Length = 1922 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 agaaatcaacaagaaaaatacaaac 89 |||||||||||||||||| |||||| Sbjct: 561 agaaatcaacaagaaaaacacaaac 537
>gb|AY093781.1| Arabidopsis thaliana AT4g26940/F10M23_280 mRNA sequence Length = 1632 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 cttccactcacaatctgttgt 195 ||||||||||||||||||||| Sbjct: 1009 cttccactcacaatctgttgt 989
>ref|XM_678860.1| PREDICTED: Danio rerio hypothetical protein LOC556128 (LOC556128), mRNA Length = 2139 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 caacaagaaaaatacaaactc 91 ||||||||||||||||||||| Sbjct: 120 caacaagaaaaatacaaactc 100
>ref|XM_697041.1| PREDICTED: Danio rerio hypothetical protein LOC554806 (LOC554806), mRNA Length = 2151 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 caacaagaaaaatacaaactc 91 ||||||||||||||||||||| Sbjct: 126 caacaagaaaaatacaaactc 106
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 aagagaaatcaacaagaaaaa 82 ||||||||||||||||||||| Sbjct: 41689867 aagagaaatcaacaagaaaaa 41689847
>emb|BX828366.1|CNS0A3YS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH80ZE10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1967 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 cttccactcacaatctgttgt 195 ||||||||||||||||||||| Sbjct: 1402 cttccactcacaatctgttgt 1382
>dbj|AP003259.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0466H10 Length = 176530 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 aagagaaatcaacaagaaaaa 82 ||||||||||||||||||||| Sbjct: 105469 aagagaaatcaacaagaaaaa 105449
>gb|AY085383.1| Arabidopsis thaliana clone 149102 mRNA, complete sequence Length = 1853 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 cttccactcacaatctgttgt 195 ||||||||||||||||||||| Sbjct: 1301 cttccactcacaatctgttgt 1281
>emb|BX649388.7| Zebrafish DNA sequence from clone CH211-225P5 in linkage group 4, complete sequence Length = 177865 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 caacaagaaaaatacaaactc 91 ||||||||||||||||||||| Sbjct: 12031 caacaagaaaaatacaaactc 12011
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 tttccaccaagagcctgaccaatc 500 |||||||||||||||||| ||||| Sbjct: 1276210 tttccaccaagagcctgagcaatc 1276233
>ref|XM_512171.1| PREDICTED: Pan troglodytes similar to rotatin (LOC455466), mRNA Length = 4677 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 catcagctccacaaattcac 219 |||||||||||||||||||| Sbjct: 270 catcagctccacaaattcac 251
>gb|AC164557.3| Mus musculus BAC clone RP23-282G1 from chromosome 8, complete sequence Length = 175078 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 ggtgtagttcagctgataagagaa 68 ||||| |||||||||||||||||| Sbjct: 102564 ggtgtggttcagctgataagagaa 102541
>gb|AC175388.3| Mus musculus BAC clone RP24-128B7 from chromosome y, complete sequence Length = 145957 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cttggggaacacaagaccag 309 |||||||||||||||||||| Sbjct: 30444 cttggggaacacaagaccag 30463
>gb|AC145588.3| Mus musculus BAC clone RP24-170B7 from chromosome Y, complete sequence Length = 189141 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 cttggggaacacaagaccag 309 |||||||||||||||||||| Sbjct: 122868 cttggggaacacaagaccag 122849
>gb|AY280686.1| Leptopeza sp. NCSU-99071981 CAD (r) gene, partial cds Length = 3918 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 ttgatgtcccatgcaaatgccaaa 526 ||||||||||| |||||||||||| Sbjct: 633 ttgatgtcccaagcaaatgccaaa 610
>gb|AC099597.6| Mus musculus chromosome 17, clone RP23-78K9, complete sequence Length = 272221 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ctctagttactttataggtg 48 |||||||||||||||||||| Sbjct: 263551 ctctagttactttataggtg 263570
>gb|AC105153.6| Mus musculus chromosome 17, clone RP24-376L20, complete sequence Length = 184920 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 ctctagttactttataggtg 48 |||||||||||||||||||| Sbjct: 146096 ctctagttactttataggtg 146115
>ref|XM_540124.2| PREDICTED: Canis familiaris similar to carbamoylphosphate synthetase 2/aspartate transcarbamylase/dihydroorotase (LOC483009), mRNA Length = 6947 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 585 gggtcaccagggccattact 604 |||||||||||||||||||| Sbjct: 815 gggtcaccagggccattact 796
>emb|CR940306.3| M.truncatula DNA sequence from clone MTH2-10B11 on chromosome 3, complete sequence Length = 90977 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 113 caacaacaagccaacagtacaagt 136 |||||||||||||||| ||||||| Sbjct: 18851 caacaacaagccaacaatacaagt 18828
>gb|AC127231.4| Mus musculus BAC clone RP24-554M18 from chromosome 18, complete sequence Length = 140817 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 ataagagaaatcaacaagaaaaat 83 ||||| |||||||||||||||||| Sbjct: 104377 ataagggaaatcaacaagaaaaat 104354
>gb|AC098711.2| Mus musculus BAC clone RP23-1M11 from 13, complete sequence Length = 204508 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 aagagaaatcaacaagaaaa 81 |||||||||||||||||||| Sbjct: 26518 aagagaaatcaacaagaaaa 26499
>gb|AC147472.17| Medicago truncatula clone mth2-24n18, complete sequence Length = 133272 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 caacaacaagccaacagtacaagt 136 |||||||||||||||| ||||||| Sbjct: 15770 caacaacaagccaacaatacaagt 15793
>emb|CR388129.11| Zebrafish DNA sequence from clone CH211-281L24 in linkage group 15, complete sequence Length = 96262 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 tttaaactccacaaatagta 22 |||||||||||||||||||| Sbjct: 1536 tttaaactccacaaatagta 1555
>gb|BC018945.2| Homo sapiens cDNA clone IMAGE:4106796, partial cds Length = 3210 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 581 agctgggtcaccagggccat 600 |||||||||||||||||||| Sbjct: 145 agctgggtcaccagggccat 164
>emb|BX248400.3| Human DNA sequence from clone DASS-235A23 on chromosome 6, complete sequence Length = 35283 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 580 cagctgggtcaccagggcca 599 |||||||||||||||||||| Sbjct: 18994 cagctgggtcaccagggcca 19013
>emb|AL450998.19| Human DNA sequence from clone RP11-169K16 on chromosome 1 Contains the 3' end of the gene for a novel RUN and PH domain-containing protein (KIAA0842), the 5' end of a novel gene, two genes for a novel proteins, a novel gene, the gene for filamin-binding LIM protein-1 (FBLP-1), a ribosomal protein L12 (RPL12) pseudogene, a ubiquinol-cytochrome c reductase hinge protein (UQCRH) pseudogene, a ribosomal protein S16 (RPS16) pseudogene, a novel gene (FLJ42024), the 5' end of the gene for SMART/HDAC1 associated repressor protein (SHARP) and three CpG islands, complete sequence Length = 163108 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ccaagtctgagtcatggggc 245 |||||||||||||||||||| Sbjct: 160161 ccaagtctgagtcatggggc 160180
>emb|AL450108.12| Human DNA sequence from clone RP11-456E1 on chromosome X Contains the CDX4 gene for caudal type homeo box transcription factor 4, a mortality factor 4 like 1 (MORF4L1) pseudogene, a mitogen-activated protein kinase kinase 4(LOC139201, MAP2K4) pseudogene and a ribosomal protein L7 (RPL7) pseudogene, complete sequence Length = 188281 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 605 aaaaagaacaccatcaggct 624 |||||||||||||||||||| Sbjct: 54153 aaaaagaacaccatcaggct 54172
>emb|AL359847.24| Human DNA sequence from clone RP11-41D21 on chromosome 10, complete sequence Length = 107909 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 agaaatcaacaagaaaaatacaaa 88 ||||||||||||||||||| |||| Sbjct: 2229 agaaatcaacaagaaaaatccaaa 2252
>emb|AL359182.20| Human DNA sequence from clone RP11-217B7 on chromosome 9 Contains the 5' end of the ABCA1 gene for ATP-binding cassette sub-family A (ABC1) member 1, two novel genes and two CpG islands, complete sequence Length = 96717 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 agaaatcaacaagaaaaata 84 |||||||||||||||||||| Sbjct: 20614 agaaatcaacaagaaaaata 20595
>emb|AL160163.24| Human DNA sequence from clone RP5-973N23 on chromosome 6p12.3-21.2 Contains the TRFP gene for TRF-proximal protein, the BYSL gene for bystin-like protein, the CCDN3 gene for cyclin D3, the 5' end of USP49 gene for ubiquitin specific protease 49 and 3 CpG islands, complete sequence Length = 116506 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aaatcaacaagaaaaataca 86 |||||||||||||||||||| Sbjct: 48616 aaatcaacaagaaaaataca 48635
>emb|CR759918.11| Zebrafish DNA sequence from clone CH211-278M11 in linkage group 15, complete sequence Length = 160374 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 tttaaactccacaaatagta 22 |||||||||||||||||||| Sbjct: 159850 tttaaactccacaaatagta 159869
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 ggtttcctccgtgatgacca 458 |||||||||||||||||||| Sbjct: 2261556 ggtttcctccgtgatgacca 2261575
>emb|AL606464.11| Mouse DNA sequence from clone RP23-462P2 on chromosome 13 Contains the 3' end of the Slc17a1 gene for solute carrier family 17 vesicular glutamate transporter) member 1, the gene for a novel solute carrier family 17 (Slc17a) member, a U1 small nuclear ribonucleoprotein 1C (Snrp1c) pseudogene, a H2B histone family (H2b) pseudogene, the gene for a novel H2A histone family (H2a) member, a novel gene, the gene for the ortholog of human secretagogin, EF-hand calcium binding protein SCGN and the 3' end of a novel gene, complete sequence Length = 183698 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 579 gcagctgggtcaccagggcc 598 |||||||||||||||||||| Sbjct: 120707 gcagctgggtcaccagggcc 120726
>emb|AL161559.2|ATCHRIV59 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 59 Length = 199199 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 agaaatcaacaagaaaaata 84 |||||||||||||||||||| Sbjct: 148006 agaaatcaacaagaaaaata 148025
>emb|AL035394.1|ATF9D16 Arabidopsis thaliana DNA chromosome 4, BAC clone F9D16 (ESSAII project) Length = 119430 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 agaaatcaacaagaaaaata 84 |||||||||||||||||||| Sbjct: 12216 agaaatcaacaagaaaaata 12235
>gb|AC158584.9| Mus musculus chromosome 7, clone RP24-157G13, complete sequence Length = 183369 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 agaaatcaacaagaaaaata 84 |||||||||||||||||||| Sbjct: 104057 agaaatcaacaagaaaaata 104076
>emb|BX548034.14| Zebrafish DNA sequence from clone DKEY-106M16 in linkage group 1, complete sequence Length = 199490 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 gagaaatcaacaagaaaaat 83 |||||||||||||||||||| Sbjct: 103488 gagaaatcaacaagaaaaat 103507
>gb|AC101986.10| Mus musculus chromosome 7, clone RP24-353K18, complete sequence Length = 187803 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 agaaatcaacaagaaaaata 84 |||||||||||||||||||| Sbjct: 133046 agaaatcaacaagaaaaata 133065
>gb|AC175824.2| Pan troglodytes BAC clone CH251-171H18 from chromosome unknown, complete sequence Length = 146069 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 aaatcaacaagaaaaatacaaact 90 |||||||||||||||| ||||||| Sbjct: 115525 aaatcaacaagaaaaaaacaaact 115548
>gb|AC098971.2| Homo sapiens chromosome 3 clone RP11-118N13, complete sequence Length = 175409 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aaatcaacaagaaaaataca 86 |||||||||||||||||||| Sbjct: 137740 aaatcaacaagaaaaataca 137721
>gb|AC021749.6| Homo sapiens chromosome 11, clone RP11-810F22, complete sequence Length = 193997 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 363 gattctgggtccacagcatagttatggt 390 |||||| |||||||| |||||||||||| Sbjct: 163738 gattcttggtccacatcatagttatggt 163711
>gb|AC173705.5| Mus musculus BAC clone RP24-244N11 from chromosome y, complete sequence Length = 157985 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cttggggaacacaagaccag 309 |||||||||||||||||||| Sbjct: 125572 cttggggaacacaagaccag 125591
>gb|AC148763.14| Medicago truncatula clone mth2-29o24, complete sequence Length = 104879 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 tttaaactccacaaatagta 22 |||||||||||||||||||| Sbjct: 32346 tttaaactccacaaatagta 32365
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 ttgttcttcatcagctccac 211 |||||||||||||||||||| Sbjct: 949864 ttgttcttcatcagctccac 949845
>gb|AC073369.5| Homo sapiens chromosome 10 clone RP11-466H6, complete sequence Length = 194855 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 agaaatcaacaagaaaaatacaaa 88 ||||||||||||||||||| |||| Sbjct: 117089 agaaatcaacaagaaaaatccaaa 117112
>gb|AC023395.8| Homo sapiens chromosome 18, clone RP11-484N16, complete sequence Length = 160084 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 catcagctccacaaattcac 219 |||||||||||||||||||| Sbjct: 39547 catcagctccacaaattcac 39566
>gb|AC093893.2| Homo sapiens BAC clone RP11-707F2 from 4, complete sequence Length = 200304 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 aagagaaatcaacaagaaaa 81 |||||||||||||||||||| Sbjct: 6762 aagagaaatcaacaagaaaa 6781
>gb|AC093854.2| Homo sapiens BAC clone RP11-503F14 from 4, complete sequence Length = 167663 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 agaaatcaacaagaaaaata 84 |||||||||||||||||||| Sbjct: 108747 agaaatcaacaagaaaaata 108728
>gb|AC182555.2| Mus musculus BAC clone RP24-89D11 from chromosome y, complete sequence Length = 257364 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cttggggaacacaagaccag 309 |||||||||||||||||||| Sbjct: 135372 cttggggaacacaagaccag 135391
>gb|AF135405.3| Homo sapiens chromosome 21 clone PAC A1250 map 21q21, complete sequence Length = 88904 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 aatcaacaagaaaaatacaa 87 |||||||||||||||||||| Sbjct: 77274 aatcaacaagaaaaatacaa 77293
>gb|AC021701.8| Homo sapiens chromosome 18, clone RP11-704G7, complete sequence Length = 170311 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 catcagctccacaaattcac 219 |||||||||||||||||||| Sbjct: 147526 catcagctccacaaattcac 147545
>gb|AC018788.10| Homo sapiens chromosome , clone RP11-24E9, complete sequence Length = 146883 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 acaagaaaaatacaaactcc 92 |||||||||||||||||||| Sbjct: 66488 acaagaaaaatacaaactcc 66469
>gb|AF003530.2|AF003530 Homo sapiens homeobox protein CDX4 (CDX4) gene, complete cds and flanking repeat regions Length = 97968 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 605 aaaaagaacaccatcaggct 624 |||||||||||||||||||| Sbjct: 74357 aaaaagaacaccatcaggct 74338
>gb|AE016826.1| Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome Length = 615980 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 tgatgaccaaatttcatttt 469 |||||||||||||||||||| Sbjct: 150118 tgatgaccaaatttcatttt 150137
>gb|AC034244.6| Homo sapiens chromosome 5 clone RP11-101B14, complete sequence Length = 182892 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 aaatcaacaagaaaaatacaaact 90 |||||||||||||||| ||||||| Sbjct: 72067 aaatcaacaagaaaaaaacaaact 72090
>gb|AF287262.1|AF287262 Homo sapiens ATP-binding cassette 1 sub-family A member 1 (ABCA1) and SNAP protein genes, complete cds Length = 201144 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 agaaatcaacaagaaaaata 84 |||||||||||||||||||| Sbjct: 30604 agaaatcaacaagaaaaata 30623
>gb|AC073542.4|AC073542 Homo sapiens chromosome 5 clone RP11-221L16, complete sequence Length = 141633 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 aaatcaacaagaaaaatacaaact 90 |||||||||||||||| ||||||| Sbjct: 86076 aaatcaacaagaaaaaaacaaact 86099
>gb|AC080162.7| Homo sapiens BAC clone RP11-400L8 from 2, complete sequence Length = 171653 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 65 agaaatcaacaagaaaaatacaaactcc 92 ||||||||| ||||||||||| |||||| Sbjct: 126493 agaaatcaataagaaaaataccaactcc 126520
>gb|AC011239.5| Homo sapiens BAC clone RP11-414D15 from 2, complete sequence Length = 189875 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 581 agctgggtcaccagggccat 600 |||||||||||||||||||| Sbjct: 47364 agctgggtcaccagggccat 47345
>emb|BX248331.8| Zebrafish DNA sequence from clone CH211-236D3 in linkage group 11, complete sequence Length = 174071 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 tgatgaccaaatttcatttt 469 |||||||||||||||||||| Sbjct: 156357 tgatgaccaaatttcatttt 156338
>gb|AC096561.1| Homo sapiens BAC clone RP11-257D7 from 2, complete sequence Length = 170304 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aaatcaacaagaaaaataca 86 |||||||||||||||||||| Sbjct: 168840 aaatcaacaagaaaaataca 168821
>gb|AC109129.3| Homo sapiens 3 BAC RP11-784B9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181158 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 aaatcaacaagaaaaatacaaact 90 ||||||||| |||||||||||||| Sbjct: 75797 aaatcaacatgaaaaatacaaact 75820
>gb|AC074233.6| Homo sapiens BAC clone RP11-77O22 from 2, complete sequence Length = 58626 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aaatcaacaagaaaaataca 86 |||||||||||||||||||| Sbjct: 536 aaatcaacaagaaaaataca 517
>gb|AC175383.2| Mus musculus BAC clone RP24-194E10 from chromosome y, complete sequence Length = 172691 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cttggggaacacaagaccag 309 |||||||||||||||||||| Sbjct: 55493 cttggggaacacaagaccag 55512
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 503 ttgatgtcccatgcaaatgccaaa 526 |||||| ||||||||||||||||| Sbjct: 3361059 ttgatgccccatgcaaatgccaaa 3361082
>dbj|BS000066.1| Pan troglodytes chromosome 22 clone:CH251-126A17, map 22, complete sequences Length = 204847 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 aatcaacaagaaaaatacaa 87 |||||||||||||||||||| Sbjct: 176573 aatcaacaagaaaaatacaa 176592
>gb|AF191301.1|AF191301 Medicago sativa carbamoyl-phosphate synthase subunit A (carA) and ADP-forming, carbamate-phosphorylating (carB) genes, complete cds Length = 5330 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 435 ggatggtttcctccgtgatgaccaaatttcat 466 |||||||| || |||||||| ||||||||||| Sbjct: 1030 ggatggttgccgccgtgatggccaaatttcat 999
>gb|AC154424.2| Mus musculus BAC clone RP23-172A18 from 13, complete sequence Length = 179691 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 aagagaaatcaacaagaaaa 81 |||||||||||||||||||| Sbjct: 5990 aagagaaatcaacaagaaaa 6009
>emb|AJ302623.1|HSA302623 Homo sapiens 6M1-18*02 gene for olfactory receptor, cell line KR3598 Length = 948 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 580 cagctgggtcaccagggcca 599 |||||||||||||||||||| Sbjct: 501 cagctgggtcaccagggcca 482
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 582 gctgggtcaccagggccatt 601 |||||||||||||||||||| Sbjct: 505895 gctgggtcaccagggccatt 505876
>dbj|AP001680.1| Homo sapiens genomic DNA, chromosome 21q, section 24/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 aatcaacaagaaaaatacaa 87 |||||||||||||||||||| Sbjct: 260503 aatcaacaagaaaaatacaa 260522
>emb|AJ872268.1| Thermotoga naphthophila 16S rRNA gene, 23S rRNA gene, trpE gene, rrp gene, ORF1, gcp gene, clpx gene, ORF2, glmS gene, plsX gene, rpmF gene, ORF3, ORF4, ORF5, ORF6, pheA gene, phoB gene, actI gene, lgt gene, ham1 gene, ORF7, ispA gene, ORF8, ORF9, ORF10, ruvA gene, folC gene, deoB gene, leuS gene, ORF15, ORF11, ORF12, ahcY gene, topG gene, hppa gene, acp gene, ORF13, ORF14, priA gene, tRNA-Pro gene, tRNA-Ile gene, tRNA-Ala gene, group I intron, IGS and ITS1, strain RKU10 Length = 45429 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 483 ccaagagcctgaccaatcaattga 506 |||||||||||| ||||||||||| Sbjct: 39447 ccaagagcctgaacaatcaattga 39424
>gb|AC142269.4| Mus musculus BAC clone RP24-112B7 from Y, complete sequence Length = 185622 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 cttggggaacacaagaccag 309 |||||||||||||||||||| Sbjct: 118343 cttggggaacacaagaccag 118324
>gb|AC154286.1| Mus musculus BAC clone RP24-476G22 from 17, complete sequence Length = 181094 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 ctctagttactttataggtg 48 |||||||||||||||||||| Sbjct: 159440 ctctagttactttataggtg 159421
>gb|AC147249.3| Mus musculus BAC clone RP24-85J13 from Y, complete sequence Length = 197408 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 cttggggaacacaagaccag 309 |||||||||||||||||||| Sbjct: 49731 cttggggaacacaagaccag 49712
>gb|AC149059.3| Mus musculus BAC clone RP23-325A2 from 18, complete sequence Length = 206973 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 ataagagaaatcaacaagaaaaat 83 ||||| |||||||||||||||||| Sbjct: 148511 ataagggaaatcaacaagaaaaat 148488
>dbj|AP007287.1| Lotus japonicus genomic DNA, clone:LjT12M13, TM0054b, complete sequence Length = 77961 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 ttgttcttcatcagctccac 211 |||||||||||||||||||| Sbjct: 54881 ttgttcttcatcagctccac 54862
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 40.1 bits (20), Expect = 8.6 Identities = 35/40 (87%) Strand = Plus / Minus Query: 430 gaactggatggtttcctccgtgatgaccaaatttcatttt 469 |||| |||||||| | |||||||| |||||||||||||| Sbjct: 534734 gaaccggatggttggcgccgtgatggccaaatttcatttt 534695
>gb|AC145556.4| Mus musculus BAC clone RP23-308E7 from chromosome 8, complete sequence Length = 178400 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 ggtgtagttcagctgataagagaa 68 ||||| |||||||||||||||||| Sbjct: 32377 ggtgtggttcagctgataagagaa 32354
>dbj|AP001138.3| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, LL56-APP region, clone:B880L11, complete sequence Length = 163969 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 aatcaacaagaaaaatacaa 87 |||||||||||||||||||| Sbjct: 125887 aatcaacaagaaaaatacaa 125906 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,954,869 Number of Sequences: 3902068 Number of extensions: 6954869 Number of successful extensions: 119134 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 129 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 118468 Number of HSP's gapped (non-prelim): 663 length of query: 634 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 611 effective length of database: 17,143,297,704 effective search space: 10474554897144 effective search space used: 10474554897144 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
