ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags27g13 |
|---|---|
| Clone Library Name | barley_pub |
>RLA0_ORYSA (P41095) 60S acidic ribosomal protein P0| Length = 318 Score = 173 bits (439), Expect = 2e-43 Identities = 90/130 (69%), Positives = 98/130 (75%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 LVI NVYDSGSVFSPEVLDLTE+DLM+KFASGVSMVAS+SLAISYPT+AAAPHMFLN YK Sbjct: 189 LVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNGYK 248 Query: 348 NVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 169 NVLAVA+ET+YSY HADKIKEYLKDPSKFAV S Sbjct: 249 NVLAVAVETEYSYPHADKIKEYLKDPSKFAVAAPVAADSGAAAPSAAKEEEKKEEPEEES 308 Query: 168 DGEMGFSLFD 139 DG++G SLFD Sbjct: 309 DGDLGMSLFD 318
>RLA0_MAIZE (O24573) 60S acidic ribosomal protein P0| Length = 318 Score = 163 bits (412), Expect = 3e-40 Identities = 86/131 (65%), Positives = 96/131 (73%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 L + +VY+ GSVFSPEVLDL+EEDL++KFA+GVSMVASLSLAISYPT+AA PHMF+N YK Sbjct: 189 LQVTSVYEDGSVFSPEVLDLSEEDLIEKFATGVSMVASLSLAISYPTLAAVPHMFINGYK 248 Query: 348 NVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 169 NVLAVA+ETDYSY HADKIKEYLKDPSKFAV S Sbjct: 249 NVLAVAVETDYSYPHADKIKEYLKDPSKFAV-AAPVAAGDSGASAAPKEEEKAAEPEEES 307 Query: 168 DGEMGFSLFDD 136 D EMGFSLFDD Sbjct: 308 DEEMGFSLFDD 318
>RLA0_SOYBN (P50346) 60S acidic ribosomal protein P0| Length = 320 Score = 160 bits (406), Expect = 2e-39 Identities = 84/131 (64%), Positives = 96/131 (73%), Gaps = 1/131 (0%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 LV+ +VYD+GSVFSPEVLDLTE+DL+ KFA+GVSMV SLSLAISYPT+AAAPHMF+NAYK Sbjct: 190 LVVLSVYDNGSVFSPEVLDLTEDDLIGKFAAGVSMVTSLSLAISYPTLAAAPHMFVNAYK 249 Query: 348 NVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXX-XXXXXXXXXXXXXXXXXXXXXXX 172 NVLAVA+ETDYS+ ADK+KEYLKDPSKFAV Sbjct: 250 NVLAVAVETDYSFPEADKVKEYLKDPSKFAVAAVAAPAAASGAPAAAAKEEEKKEEPAEE 309 Query: 171 SDGEMGFSLFD 139 SD +MGFSLFD Sbjct: 310 SDDDMGFSLFD 320
>RLA0A_ARATH (O04204) 60S acidic ribosomal protein P0-A| Length = 317 Score = 146 bits (368), Expect = 4e-35 Identities = 75/129 (58%), Positives = 94/129 (72%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 LV+ +VYD+GSVF+PEVL+LTE+DL++KFA+GVSM+ +LSLAISYPT+AAAPHMFLNAYK Sbjct: 190 LVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAAPHMFLNAYK 249 Query: 348 NVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 169 NVLAVAL T+YS+ A+ +KE+LKDP+KFAV S Sbjct: 250 NVLAVALATEYSFPQAENVKEFLKDPTKFAV--AVAAPVSGESGGAVVAVAVEEEAAEES 307 Query: 168 DGEMGFSLF 142 DG+MGF LF Sbjct: 308 DGDMGFDLF 316
>RLA0C_ARATH (P57691) 60S acidic ribosomal protein P0-C| Length = 323 Score = 145 bits (365), Expect = 9e-35 Identities = 73/134 (54%), Positives = 92/134 (68%), Gaps = 3/134 (2%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 LV+ +VYD+GSVFSPEVLDLTE+ L++KFASG+SMV SL+LA+SYPT+AAAPHMF+NAYK Sbjct: 189 LVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYK 248 Query: 348 NVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 169 N LA+A+ TDY++ A+K+KE+LKDPSKF V S Sbjct: 249 NALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAAAVSADAGGGSAQAGAAAKVEEKKEES 308 Query: 168 DG---EMGFSLFDD 136 D E GF LFD+ Sbjct: 309 DEEDYEGGFGLFDE 322
>RLA0B_ARATH (Q42112) 60S acidic ribosomal protein P0-B| Length = 320 Score = 145 bits (365), Expect = 9e-35 Identities = 71/131 (54%), Positives = 90/131 (68%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 LV+ +VYD+GSVFSPEVLDLTE+ L++KFASG+SMV SL+LA+SYPT+AAAPHMF+NAYK Sbjct: 189 LVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYK 248 Query: 348 NVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 169 N LA+A+ T+Y++ A+K+KEYLKDPSKFAV Sbjct: 249 NALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGAPAAAKVEEKEESDEE 308 Query: 168 DGEMGFSLFDD 136 D F LFD+ Sbjct: 309 DYGGDFGLFDE 319
>RLA0_LUPLU (P50345) 60S acidic ribosomal protein P0| Length = 322 Score = 125 bits (315), Expect = 5e-29 Identities = 66/133 (49%), Positives = 82/133 (61%), Gaps = 2/133 (1%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 LV+ +VYD+GSVF PEVLDLTE+DL++KFA GVS + P +AAPH+F+NAYK Sbjct: 190 LVVLSVYDNGSVFKPEVLDLTEDDLLEKFAIGVSQCYFSDTSHFIPNPSAAPHVFINAYK 249 Query: 348 NVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXX--XX 175 NVLAVA+ T+YS+ AD++KEYLKDPSKFA Sbjct: 250 NVLAVAVATEYSFPQADEVKEYLKDPSKFAAVAAAAAPAADSGAAPAAAAKAEKEEEPAE 309 Query: 174 XSDGEMGFSLFDD 136 SD EMGF LFD+ Sbjct: 310 ESDDEMGFGLFDE 322
>RLA0_BRARE (Q9PV90) 60S acidic ribosomal protein P0 (L10E)| Length = 319 Score = 117 bits (293), Expect = 2e-26 Identities = 59/130 (45%), Positives = 77/130 (59%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 L+I VYD+GSV+SPEVLD+TE+ L +F GV +AS+ L I YPT+A+ PH +N YK Sbjct: 190 LIIQQVYDNGSVYSPEVLDITEDALHKRFLKGVRNIASVCLQIGYPTLASIPHTIINGYK 249 Query: 348 NVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 169 VLAV +ETDY++ A+K+K YL DP+ FAV S Sbjct: 250 RVLAVTVETDYTFPLAEKVKAYLADPTAFAVAAPVAAATEQKSAAPAAKEEAPKEDSEES 309 Query: 168 DGEMGFSLFD 139 D +MGF LFD Sbjct: 310 DEDMGFGLFD 319
>RLA0_RANSY (Q9DG68) 60S acidic ribosomal protein P0 (L10E)| Length = 315 Score = 114 bits (284), Expect = 2e-25 Identities = 59/130 (45%), Positives = 77/130 (59%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 L+I VYD+GS++SPEVLD+TE+ L +F GV +AS+ L I YPT+A+ PH +N YK Sbjct: 187 LIIQQVYDNGSIYSPEVLDITEDALRARFLEGVRNIASVCLQIGYPTVASVPHSVVNGYK 246 Query: 348 NVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 169 VLA+A+ETDYS+ ADK+K +L DPS F V S Sbjct: 247 RVLALAVETDYSFPLADKVKAFLADPSAFVV-AAPVAETAAAPAASAAPAKEEKEESEES 305 Query: 168 DGEMGFSLFD 139 D +MGF LFD Sbjct: 306 DDDMGFGLFD 315
>RLA0_CHICK (P47826) 60S acidic ribosomal protein P0 (L10E)| Length = 316 Score = 114 bits (284), Expect = 2e-25 Identities = 58/130 (44%), Positives = 76/130 (58%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 LVI V+D+GS+++PEVLD+TEE L +F GV VAS+ L I YPT+A+ PH +N YK Sbjct: 187 LVIQQVFDNGSIYNPEVLDITEETLHKRFLEGVRNVASVCLQIGYPTIASVPHSIVNGYK 246 Query: 348 NVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 169 VLAVA+ETDY++ A+K+K +L DPS F S Sbjct: 247 RVLAVAVETDYTFPLAEKVKAFLADPSAFVAAAPVVVETAAPAAAAAPAKEAPKEESEES 306 Query: 168 DGEMGFSLFD 139 D +MGF LFD Sbjct: 307 DEDMGFGLFD 316
>RLA0_ICTPU (Q90YX1) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 112 bits (281), Expect = 5e-25 Identities = 53/91 (58%), Positives = 69/91 (75%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 L+I VYD+GSV+SPEVLD+TE+ L +F GV +AS+ L I YPT+A+ PH +N YK Sbjct: 187 LIIQQVYDNGSVYSPEVLDITEDALHKRFLEGVRNIASVCLQIGYPTLASIPHSIINGYK 246 Query: 348 NVLAVALETDYSYDHADKIKEYLKDPSKFAV 256 VL VA+ETDYS+ ADK+K +L DPS+FAV Sbjct: 247 RVLRVAVETDYSFPMADKVKAFLADPSRFAV 277
>RLA0_CERCA (Q9U3U0) 60S acidic ribosomal protein P0 (CcP0)| Length = 317 Score = 112 bits (280), Expect = 6e-25 Identities = 57/131 (43%), Positives = 75/131 (57%), Gaps = 1/131 (0%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 L I VYDSGS+FSPE+LD+ EDL KF +GV+ +A++SL I YPT+A+APH N +K Sbjct: 187 LAITQVYDSGSIFSPEILDIKPEDLRAKFQAGVANLAAVSLQIGYPTIASAPHSIANGFK 246 Query: 348 NVLAVALETDYSYDHADKIKEYLKDPSKF-AVXXXXXXXXXXXXXXXXXXXXXXXXXXXX 172 N+LA+A T+ + A IKE++KDPSKF A Sbjct: 247 NLLAIAASTEVEFKQAATIKEFIKDPSKFVAAAAASAPAAGAGAAAEKKEEAKKEESESE 306 Query: 171 SDGEMGFSLFD 139 D +MGF LFD Sbjct: 307 EDDDMGFGLFD 317
>RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurinic or| apyrimidinic site) lyase) (EC 4.2.99.18) (Apurinic-apyrimidinic endonuclease) Length = 317 Score = 112 bits (279), Expect = 8e-25 Identities = 55/131 (41%), Positives = 75/131 (57%), Gaps = 1/131 (0%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 L++ VYDSGS+FSPE+LD+ EDL KF GV+ +A++ L++ YPT+A+APH N +K Sbjct: 187 LIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFK 246 Query: 348 NVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXX-XXXXXXXXXXXXXXXXXXXXX 172 N+LA+A T+ + A IKEY+KDPSKFA Sbjct: 247 NLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKPESESEE 306 Query: 171 SDGEMGFSLFD 139 D +MGF LFD Sbjct: 307 EDDDMGFGLFD 317
>RLA0_HUMAN (P05388) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 110 bits (276), Expect = 2e-24 Identities = 57/131 (43%), Positives = 77/131 (58%), Gaps = 1/131 (0%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 LVI V+D+GS+++PEVLD+TEE L +F GV VAS+ L I YPT+A+ PH +N YK Sbjct: 187 LVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYK 246 Query: 348 NVLAVALETDYSYDHADKIKEYLKDPSKF-AVXXXXXXXXXXXXXXXXXXXXXXXXXXXX 172 VLA+++ETDY++ A+K+K +L DPS F A Sbjct: 247 RVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKEESEE 306 Query: 171 SDGEMGFSLFD 139 SD +MGF LFD Sbjct: 307 SDEDMGFGLFD 317
>RLA0_RAT (P19945) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 110 bits (275), Expect = 2e-24 Identities = 56/131 (42%), Positives = 77/131 (58%), Gaps = 1/131 (0%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 L+I V+D+GS++SPEVLD+TE+ L +F GV VAS+ L I YPT+A+ PH +N YK Sbjct: 187 LIIQQVFDNGSIYSPEVLDITEQALHTRFLEGVRNVASVCLQIGYPTVASVPHSIINGYK 246 Query: 348 NVLAVALETDYSYDHADKIKEYLKDPSKFAVXX-XXXXXXXXXXXXXXXXXXXXXXXXXX 172 VLA+++ETDY++ A+K+K +L DPS FA Sbjct: 247 RVLALSVETDYTFPLAEKVKAFLADPSAFAAAAPVAAATTAAPAAAAAPAKVEAKEESEE 306 Query: 171 SDGEMGFSLFD 139 SD +MGF LFD Sbjct: 307 SDEDMGFGLFD 317
>RLA0_BOVIN (Q95140) 60S acidic ribosomal protein P0 (L10E) (Fragment)| Length = 309 Score = 109 bits (273), Expect = 4e-24 Identities = 57/132 (43%), Positives = 77/132 (58%), Gaps = 2/132 (1%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 LVI V+D+GS+++PEVLD+TEE L +F GV VAS+ L I YPT+A+ PH +N YK Sbjct: 178 LVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYK 237 Query: 348 NVLAVALETDYSYDHADKIKEYLKDPSKF--AVXXXXXXXXXXXXXXXXXXXXXXXXXXX 175 VLA+++ETDY++ A+K+K +L DPS F A Sbjct: 238 RVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAAPAAAPAATTAAPAKVEAKEESE 297 Query: 174 XSDGEMGFSLFD 139 SD +MGF LFD Sbjct: 298 ESDEDMGFGLFD 309
>RLA0_MOUSE (P14869) 60S acidic ribosomal protein P0 (L10E)| Length = 317 Score = 107 bits (267), Expect = 2e-23 Identities = 53/131 (40%), Positives = 76/131 (58%), Gaps = 1/131 (0%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 L+I V+D+GS+++PEVLD+TE+ L +F GV VAS+ L I YPT+A+ PH +N YK Sbjct: 187 LIIQQVFDNGSIYNPEVLDITEQALHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYK 246 Query: 348 NVLAVALETDYSYDHADKIKEYLKDPSKFAVXX-XXXXXXXXXXXXXXXXXXXXXXXXXX 172 VLA+++ET+Y++ +K+K +L DPS FA Sbjct: 247 RVLALSVETEYTFPLTEKVKAFLADPSAFAAAAPAAAATTAAPAAAAAPAKAEAKEESEE 306 Query: 171 SDGEMGFSLFD 139 SD +MGF LFD Sbjct: 307 SDEDMGFGLFD 317
>RLA0_CAEEL (Q93572) 60S acidic ribosomal protein P0| Length = 311 Score = 102 bits (253), Expect = 8e-22 Identities = 54/130 (41%), Positives = 74/130 (56%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 LV+ VYD G++++PEVLD+T E+L +F SGV VAS+SLA++YPT+A+ H N + Sbjct: 186 LVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQ 245 Query: 348 NVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 169 N+L VA TD S+ A+ IK ++ DPSKFA S Sbjct: 246 NMLGVAAVTDVSFKEAETIKAFIADPSKFA----AAAPAAAAAPAAAAPAAKKEEPKEES 301 Query: 168 DGEMGFSLFD 139 D +MGF LFD Sbjct: 302 DDDMGFGLFD 311
>RLA0_SCHPO (O74864) 60S acidic ribosomal protein P0| Length = 312 Score = 97.8 bits (242), Expect = 2e-20 Identities = 47/128 (36%), Positives = 73/128 (57%) Frame = -2 Query: 522 ICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNV 343 + +YD G+VFSPE+LD++EEDL+ S S++ ++SL +YPT+ + H +NAYKN+ Sbjct: 187 VLTIYDQGNVFSPEILDVSEEDLIGHLLSAASIITAISLGANYPTILSVMHSVVNAYKNL 246 Query: 342 LAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDG 163 +AV+L T+Y+++ ++ K +L DPS F V SD Sbjct: 247 VAVSLATEYTFEGTEQTKAFLADPSAFVV--AAAPAAAAGGEAEAPAAEAAAEEEEESDE 304 Query: 162 EMGFSLFD 139 +MGF LFD Sbjct: 305 DMGFGLFD 312
>RLA0_YEAST (P05317) 60S acidic ribosomal protein P0 (L10E)| Length = 312 Score = 92.8 bits (229), Expect = 5e-19 Identities = 46/130 (35%), Positives = 69/130 (53%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 L + VYD+G VF +LD+T+E+L+ F S VS +AS+SLAI YPT+ + H +N YK Sbjct: 185 LTVVQVYDNGQVFPSSILDITDEELVSHFVSAVSTIASISLAIGYPTLPSVGHTLINNYK 244 Query: 348 NVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 169 ++LAVA+ Y Y + + + +++P K+A S Sbjct: 245 DLLAVAIAASYHYPEIEDLVDRIENPEKYA--AAAPAATSAASGDAAPAEEAAAEEEEES 302 Query: 168 DGEMGFSLFD 139 D +MGF LFD Sbjct: 303 DDDMGFGLFD 312
>RLA0_EIMTE (Q967Y7) 60S acidic ribosomal protein P0| Length = 314 Score = 92.8 bits (229), Expect = 5e-19 Identities = 46/130 (35%), Positives = 74/130 (56%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 L + +VYD+GSV+S VLD+T+E +++ FA+G + VA++S A+ P+ AAAPH L A++ Sbjct: 186 LKVEHVYDNGSVYSASVLDITDEQILEAFAAGAANVAAVSRAVGLPSAAAAPHSILEAFR 245 Query: 348 NVLAVALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 169 N A+ L+T + + ++KE +++P+ FA Sbjct: 246 NCAALCLDTPFCFPQMQRLKEMVENPAAFA-AAAAPAAAAPAAAPAAAAKAPEPEEEEEE 304 Query: 168 DGEMGFSLFD 139 DG+MGFSLFD Sbjct: 305 DGDMGFSLFD 314
>RLA0_PLAF8 (Q94660) 60S acidic ribosomal protein P0| Length = 316 Score = 89.0 bits (219), Expect = 7e-18 Identities = 42/125 (33%), Positives = 71/125 (56%) Frame = -2 Query: 513 VYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAV 334 VYD G ++ +VLD+T+ED+++KF+ GVS VA+LS A T A+ PH+F+ A+KN++A+ Sbjct: 192 VYDDGVIYDAKVLDITDEDILEKFSKGVSNVAALSRATGVITEASYPHVFVEAFKNIVAL 251 Query: 333 ALETDYSYDHADKIKEYLKDPSKFAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGEMG 154 +++DY++ +K+++++P FA DG MG Sbjct: 252 IIDSDYTFPLMKILKKWVENPEAFAAVAAPASAAKADEPKKEEAKKVEEEEEEEEDGFMG 311 Query: 153 FSLFD 139 F +FD Sbjct: 312 FGMFD 316
>RLA0_NEUCR (Q96TJ5) 60S acidic ribosomal protein P0| Length = 313 Score = 85.9 bits (211), Expect = 6e-17 Identities = 37/88 (42%), Positives = 63/88 (71%) Frame = -2 Query: 522 ICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNV 343 I VYD G+ F +VLD++EE L+ F++ ++ +ASLSLA+++PT+ + H +NAYK V Sbjct: 187 IAQVYDQGNTFPSDVLDISEEQLLKAFSTAITTIASLSLALNFPTLPSVIHSVVNAYKKV 246 Query: 342 LAVALETDYSYDHADKIKEYLKDPSKFA 259 LAVA+ET+ S+ +++K+ + +P +A Sbjct: 247 LAVAIETEISWPEIEELKDRIANPEAYA 274
>RLA0_CHERU (P29764) 60S acidic ribosomal protein P0 (Light-induced 34 kDa| protein) Length = 321 Score = 84.0 bits (206), Expect = 2e-16 Identities = 40/49 (81%), Positives = 46/49 (93%) Frame = -2 Query: 516 NVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPH 370 +VYD GSVFSPEVLDLTE+DL+ +FA+GVSMV SLSLAISYPT+AAAPH Sbjct: 194 SVYDDGSVFSPEVLDLTEDDLLARFATGVSMVTSLSLAISYPTLAAAPH 242
>RLA0_PODAN (Q9C3Z6) 60S acidic ribosomal protein P0| Length = 314 Score = 83.2 bits (204), Expect = 4e-16 Identities = 35/88 (39%), Positives = 62/88 (70%) Frame = -2 Query: 522 ICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNV 343 I VYD G+ F VLD++EE L+ F+S ++ +A++SLA+++PT+ + H +N+YK V Sbjct: 187 IAQVYDQGNTFPSSVLDISEEQLLKAFSSAITTIAAVSLALNFPTLPSVIHSLVNSYKKV 246 Query: 342 LAVALETDYSYDHADKIKEYLKDPSKFA 259 LAVA+ET+ S+ +++K+ + +P +A Sbjct: 247 LAVAIETEISWPEIEELKDRIANPEAYA 274
>RLA0_DICDI (P22685) 60S acidic ribosomal protein P0| Length = 305 Score = 82.4 bits (202), Expect = 7e-16 Identities = 35/75 (46%), Positives = 57/75 (76%) Frame = -2 Query: 513 VYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAV 334 +YD+G+ +SP + +EEDL++KF G+ +A++SL I YPT+A+ PH +NA+KN+LA+ Sbjct: 191 IYDAGACYSPSI---SEEDLINKFKQGIFNIAAISLEIGYPTVASIPHSVMNAFKNLLAI 247 Query: 333 ALETDYSYDHADKIK 289 + ET Y++D A+K K Sbjct: 248 SFETSYTFDAAEKFK 262
>RLA0_TRYCR (P26796) 60S acidic ribosomal protein P0| Length = 323 Score = 58.9 bits (141), Expect = 8e-09 Identities = 27/73 (36%), Positives = 44/73 (60%) Frame = -2 Query: 516 NVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLA 337 +V+D G +F E L +T++ + G+S VA+LSL PT A PHM ++A+K +L Sbjct: 198 SVWDRGMLFLREDLSITDDVVEKYLLEGISNVAALSLGAGIPTAATLPHMIMDAFKTLLG 257 Query: 336 VALETDYSYDHAD 298 ++ T+Y +D D Sbjct: 258 ASVATEYEFDEFD 270
>RLA0_LEIIN (P39097) 60S acidic ribosomal protein P0| Length = 323 Score = 50.8 bits (120), Expect = 2e-06 Identities = 24/72 (33%), Positives = 45/72 (62%) Frame = -2 Query: 522 ICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNV 343 + +V+D G +F+ E L +TE+ + G+S VA+++L PT + M ++A+KN+ Sbjct: 196 VLSVWDRGVLFTREDLMMTEDMVEKMLMEGLSNVAAMALGAGIPTSSTIGPMLVDAFKNL 255 Query: 342 LAVALETDYSYD 307 LAV++ T Y ++ Sbjct: 256 LAVSVATSYEFE 267
>RLA0_LEICH (P39096) 60S acidic ribosomal protein P0| Length = 322 Score = 50.8 bits (120), Expect = 2e-06 Identities = 24/72 (33%), Positives = 45/72 (62%) Frame = -2 Query: 522 ICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNV 343 + +V+D G +F+ E L +TE+ + G+S VA+++L PT + M ++A+KN+ Sbjct: 195 VLSVWDRGVLFTREDLMMTEDMVEKMLMEGLSNVAAMALGAGIPTSSTIGPMLVDAFKNL 254 Query: 342 LAVALETDYSYD 307 LAV++ T Y ++ Sbjct: 255 LAVSVATSYEFE 266
>RLA0_PYRAB (Q9UXS5) Acidic ribosomal protein P0 homolog (L10E)| Length = 341 Score = 43.9 bits (102), Expect = 3e-04 Identities = 22/71 (30%), Positives = 38/71 (53%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 L + VY+ G V++P+VL + E++ +D +L++ I+YPT + A+ Sbjct: 189 LDVLAVYEDGIVYTPDVLAIDEQEYIDMVQKAYMHAFNLAVNIAYPTPETIEAIIQKAFL 248 Query: 348 NVLAVALETDY 316 N AVA+E Y Sbjct: 249 NAKAVAVEAGY 259
>RLA0_PYRHO (O74109) Acidic ribosomal protein P0 homolog (L10E)| Length = 342 Score = 43.1 bits (100), Expect = 5e-04 Identities = 21/71 (29%), Positives = 37/71 (52%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 L + VY+ G V++P+VL + E++ +D +L++ I+YPT + A+ Sbjct: 189 LDVLAVYEDGIVYTPDVLAIDEQEYIDMLQKAYMHAFNLAVNIAYPTPETIEAIIQKAFL 248 Query: 348 NVLAVALETDY 316 N VA+E Y Sbjct: 249 NAKTVAIEAGY 259
>RLA0_METVO (Q9Y8J3) Acidic ribosomal protein P0 homolog (L10E) (Fragment)| Length = 297 Score = 42.4 bits (98), Expect = 8e-04 Identities = 21/68 (30%), Positives = 36/68 (52%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 L + VY+ G V+ PE+L + E++ + K S + +LS+ PT A + A+ Sbjct: 194 LNVLGVYEDGIVYDPEILKIDEDEFLAKLQSAYTGAFNLSVNAVIPTSATIETIVQKAFS 253 Query: 348 NVLAVALE 325 N AV++E Sbjct: 254 NAKAVSIE 261
>RLA0_METJA (P54049) Acidic ribosomal protein P0 homolog (L10E)| Length = 338 Score = 41.6 bits (96), Expect = 0.001 Identities = 20/71 (28%), Positives = 37/71 (52%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 L I VY+ G +++P+VL + EE L+ + +L+ +YP P + A+ Sbjct: 193 LNILAVYEDGIIYTPDVLKVDEEKLLADIQAAYQNAFNLAFNTAYPAKEVLPFLIQKAFI 252 Query: 348 NVLAVALETDY 316 N A+++ET + Sbjct: 253 NARALSVETAF 263
>RLA0_METTL (O52705) Acidic ribosomal protein P0 homolog (L10E)| Length = 338 Score = 41.2 bits (95), Expect = 0.002 Identities = 18/65 (27%), Positives = 35/65 (53%) Frame = -2 Query: 510 YDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVA 331 Y+ G +++P+VL + EE+ + K S +LS+ + PT + A+ N AV+ Sbjct: 200 YEDGVIYTPDVLKIDEEEFVQKIQDAYSKAFNLSVNAAIPTAQTIETLLQKAFANARAVS 259 Query: 330 LETDY 316 +E+ + Sbjct: 260 IESAF 264
>RLA0_PYRFU (Q8TZJ8) Acidic ribosomal protein P0 homolog (L10E)| Length = 339 Score = 40.8 bits (94), Expect = 0.002 Identities = 19/66 (28%), Positives = 35/66 (53%) Frame = -2 Query: 513 VYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAV 334 VY+ G +++P+VL + E + ++ +L++ I+YPT + A+ N AV Sbjct: 194 VYEDGIIYTPDVLAIDESEYINMLQKAYMHAFNLAVNIAYPTPQTIEAIIQKAFLNAKAV 253 Query: 333 ALETDY 316 A+E Y Sbjct: 254 AVEAGY 259
>RLA0_PYRKO (Q5JH36) Acidic ribosomal protein P0 homolog (L10E)| Length = 340 Score = 38.1 bits (87), Expect = 0.015 Identities = 19/65 (29%), Positives = 32/65 (49%) Frame = -2 Query: 510 YDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVA 331 Y+ G V++P+VL + E + ++ +LS+ I+YPT + AY VA Sbjct: 194 YEDGIVYTPDVLAIDESEYINMLQKAYMHAFNLSVNIAYPTKQTIEAILQKAYLGAKNVA 253 Query: 330 LETDY 316 +E Y Sbjct: 254 VEAGY 258
>RLA0_METVA (P15826) Acidic ribosomal protein P0 homolog (L10E) (ML2)| Length = 336 Score = 37.0 bits (84), Expect = 0.033 Identities = 18/71 (25%), Positives = 37/71 (52%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYK 349 L + VY+ G +++ +VL + EE+ + K + +LS+ PT A + A+ Sbjct: 194 LNVLGVYEEGVIYTSDVLRIDEEEFLGKLQKAYTNAFNLSVNAVIPTSATIETIVQKAFN 253 Query: 348 NVLAVALETDY 316 + AV++E+ + Sbjct: 254 DAKAVSVESAF 264
>RLA0_HALMA (P15825) 50S ribosomal protein L10E (Ribosomal protein L10) (Acidic| ribosomal protein P0 homolog) (L10E) (HMal10) Length = 348 Score = 37.0 bits (84), Expect = 0.033 Identities = 19/63 (30%), Positives = 31/63 (49%) Frame = -2 Query: 513 VYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAV 334 V+ G +F PE L+L ++ + +LS+ YPT AP M +A N ++ Sbjct: 196 VFADGVLFEPEELELDIDEYRSDIQAAAGRAFNLSVNADYPTATTAPTMLQSARGNAKSL 255 Query: 333 ALE 325 AL+ Sbjct: 256 ALQ 258
>RLA0_HALSA (P13553) Acidic ribosomal protein P0 homolog (L10E)| Length = 352 Score = 33.1 bits (74), Expect = 0.48 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = -2 Query: 513 VYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAV 334 V+ G +F+PE L++ ++ S + +LS+ +YPT AP + ++ Sbjct: 196 VFSEGVLFTPEELEIDVDEYRADIQSAAASARNLSVNAAYPTERTAPDLIAKGRGEAKSL 255 Query: 333 ALETDY-SYDHADKI 292 L+ S D AD + Sbjct: 256 GLQASVESPDLADDL 270
>RLA0_METMA (Q8PY51) Acidic ribosomal protein P0 homolog (L10E)| Length = 347 Score = 32.3 bits (72), Expect = 0.82 Identities = 15/53 (28%), Positives = 24/53 (45%) Frame = -2 Query: 510 YDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAY 352 YD G+++ PE+L + E +LS+ +YPT A + AY Sbjct: 196 YDDGTIYEPELLAVDESKYFSDIIRAAQNAFNLSVNTAYPTGATIGTLLAKAY 248
>RLA0_ARCFU (O28781) Acidic ribosomal protein P0 homolog (L10E)| Length = 339 Score = 30.8 bits (68), Expect = 2.4 Identities = 15/60 (25%), Positives = 30/60 (50%) Frame = -2 Query: 507 DSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVAL 328 DSG + +PE L + E +++ F M +L++ +Y T A + + A + +A+ Sbjct: 194 DSGVILTPETLAIDTEKVLEDFQRAYQMALNLAVNSAYVTEETAEILIMKAVMDARNLAI 253
>RLA0_HALVO (P41198) Acidic ribosomal protein P0 homolog (L10E)| Length = 350 Score = 30.8 bits (68), Expect = 2.4 Identities = 17/62 (27%), Positives = 26/62 (41%) Frame = -2 Query: 513 VYDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAV 334 V+ G +F P+ L + ++ S +LS+ YPT AP + A AV Sbjct: 196 VFSEGVLFEPDELAIDVDEYRADIQSASPAATNLSVNAVYPTAQTAPTLIAKATSEAKAV 255 Query: 333 AL 328 L Sbjct: 256 GL 257
>RLA0_SULSO (P96039) Acidic ribosomal protein P0 homolog (L10E) (Ribosomal| protein L10) Length = 338 Score = 30.4 bits (67), Expect = 3.1 Identities = 18/65 (27%), Positives = 25/65 (38%) Frame = -2 Query: 510 YDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNAYKNVLAVA 331 Y G V E L L E +L++ I+YPT +KN +A+A Sbjct: 198 YHEGLVIPAESLKLDLEGYRSNITEAYRNAFTLAVEIAYPTPDVLKFTISKVFKNAIALA 257 Query: 330 LETDY 316 E Y Sbjct: 258 SEIGY 262
>YBH7_YEAST (P38183) Very hypothetical 16.3 kDa protein in NUP170-ILS1| intergenic region Length = 143 Score = 30.0 bits (66), Expect = 4.1 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 7/64 (10%) Frame = -2 Query: 528 LVICNVYDSGSVFSPEVLDLTEEDLM---DKFASGVSMVASLSLAISYPT----MAAAPH 370 L+ C+ GSVF P L +++ ++ K + ++ + +SL SY T +A+ PH Sbjct: 62 LIDCSSSPIGSVFEPSYLAMSDLQVLLNISKCSLTMASKSIVSLTNSYSTKTSSVASKPH 121 Query: 369 MFLN 358 FLN Sbjct: 122 FFLN 125
>RLA0_METAC (Q8TI80) Acidic ribosomal protein P0 homolog (L10E)| Length = 347 Score = 29.3 bits (64), Expect = 7.0 Identities = 13/52 (25%), Positives = 23/52 (44%) Frame = -2 Query: 510 YDSGSVFSPEVLDLTEEDLMDKFASGVSMVASLSLAISYPTMAAAPHMFLNA 355 YD G+++ PE+L + E +LS+ ++PT A + A Sbjct: 196 YDDGTIYEPELLAVDESKYFSDIIRAAQNAFNLSVNTAFPTSATISTLLAKA 247
>Y421_METJA (Q57864) Hypothetical protein MJ0421| Length = 360 Score = 28.9 bits (63), Expect = 9.1 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 4/36 (11%) Frame = -2 Query: 351 KNVLAVALETDYSYDH----ADKIKEYLKDPSKFAV 256 + VL V ET+ +D A+KIK+Y+K+ FAV Sbjct: 58 ERVLKVYFETETDFDKIVNLAEKIKDYIKEDETFAV 93
>AKA12_HUMAN (Q02952) A-kinase anchor protein 12 (A-kinase anchor protein 250| kDa) (AKAP 250) (Myasthenia gravis autoantigen gravin) Length = 1781 Score = 28.9 bits (63), Expect = 9.1 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +3 Query: 300 QHGHTSSLSPKRPQEHSCMH*GTCAVQQ 383 Q G +S+ SP+ P+E +C+ G VQQ Sbjct: 560 QKGESSASSPEEPEEITCLEKGLAEVQQ 587
>CHRD_HUMAN (Q9H2X0) Chordin precursor| Length = 955 Score = 28.9 bits (63), Expect = 9.1 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +3 Query: 369 CAVQQPWWGMRSPGTVRQPWKHQKQTCPS 455 CA + P WG R+ G R K+ K CP+ Sbjct: 80 CACEAPQWGRRTRGPGRVSCKNIKPECPT 108 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,471,722 Number of Sequences: 219361 Number of extensions: 1088133 Number of successful extensions: 3023 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 2936 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3016 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
