ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags27g07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197319.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0026L12.24), mRNA Length = 943 Score = 521 bits (263), Expect = e-145 Identities = 443/503 (88%) Strand = Plus / Minus Query: 51 atgtatggctcaatgaacttctagaagacctgggcgactttgctcgccagtacacggtcc 110 |||||||||||| ||||| ||||||||||||||||||||| || || || ||||||||| Sbjct: 732 atgtatggctcattgaacgcctagaagacctgggcgactttacttgcaagcacacggtcc 673 Query: 111 cgcttttcgatgaactcgtaagggaaccaaccagctttccccctgcactcaccttcagcc 170 | || |||||| | |||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 672 cttttctcgatgtagtcgtaagggaaccagccagctttccctctgcattcaccttctgcc 613 Query: 171 catccattgtttgacaccttccggaccactatgtagtcaccggttgccaggttgagctca 230 |||||||||||||||||||||||||| ||||| |||||||| | |||||||||||||||| Sbjct: 612 catccattgtttgacaccttccggacaactatatagtcaccagctgccaggttgagctca 553 Query: 231 gtttcagtctcagctcggtatgactggatcgcctcagccaggaagtgctccactgtctcc 290 |||||| ||||||| || || |||||||| |||||||||| |||| ||||| || ||| Sbjct: 552 gtttcactctcagcacgataagactggatggcctcagccaagaagaattccacagtttcc 493 Query: 291 accaattcggcaactgttggagtcctcatgaatataccgttaacttcttcatatgaaggt 350 |||||||| || ||||||||| |||||||||| | |||||||| |||||||||||||||| Sbjct: 492 accaattcagcgactgttggattcctcatgaaaacaccgttaatttcttcatatgaaggt 433 Query: 351 ggcggtggcatagagttctcaatgactggaggaggtgctccttcaattctttggcgctca 410 || ||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 432 ggtggtggcatagaactctcaacagctggaggaggtgctccttcaattctttggcgctca 373 Query: 411 gctaccatctctctttcaagttgatctagaatctgtaggaccctttggtggtaacttctc 470 | |||||||||||||||||||||||| |||||||| || ||||| ||||| ||||||||| Sbjct: 372 gataccatctctctttcaagttgatcaagaatctgcagaaccctctggtgataacttctc 313 Query: 471 tcagattcaaccatcgcgataagtcgttgtaatgtcagcctttgttgttgggcttcaaca 530 |||||||| ||||| || || |||||||| || ||||| ||||| ||||| ||||||||| Sbjct: 312 tcagattcgaccattgcaattagtcgttgcaaggtcagtctttgctgttgagcttcaaca 253 Query: 531 gcagtcattgctgcaacagcttc 553 |||||||||| |||||| ||||| Sbjct: 252 gcagtcattgatgcaacggcttc 230
>dbj|AK067223.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097A14, full insert sequence Length = 1596 Score = 521 bits (263), Expect = e-145 Identities = 443/503 (88%) Strand = Plus / Minus Query: 51 atgtatggctcaatgaacttctagaagacctgggcgactttgctcgccagtacacggtcc 110 |||||||||||| ||||| ||||||||||||||||||||| || || || ||||||||| Sbjct: 1387 atgtatggctcattgaacgcctagaagacctgggcgactttacttgcaagcacacggtcc 1328 Query: 111 cgcttttcgatgaactcgtaagggaaccaaccagctttccccctgcactcaccttcagcc 170 | || |||||| | |||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 1327 cttttctcgatgtagtcgtaagggaaccagccagctttccctctgcattcaccttctgcc 1268 Query: 171 catccattgtttgacaccttccggaccactatgtagtcaccggttgccaggttgagctca 230 |||||||||||||||||||||||||| ||||| |||||||| | |||||||||||||||| Sbjct: 1267 catccattgtttgacaccttccggacaactatatagtcaccagctgccaggttgagctca 1208 Query: 231 gtttcagtctcagctcggtatgactggatcgcctcagccaggaagtgctccactgtctcc 290 |||||| ||||||| || || |||||||| |||||||||| |||| ||||| || ||| Sbjct: 1207 gtttcactctcagcacgataagactggatggcctcagccaagaagaattccacagtttcc 1148 Query: 291 accaattcggcaactgttggagtcctcatgaatataccgttaacttcttcatatgaaggt 350 |||||||| || ||||||||| |||||||||| | |||||||| |||||||||||||||| Sbjct: 1147 accaattcagcgactgttggattcctcatgaaaacaccgttaatttcttcatatgaaggt 1088 Query: 351 ggcggtggcatagagttctcaatgactggaggaggtgctccttcaattctttggcgctca 410 || ||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1087 ggtggtggcatagaactctcaacagctggaggaggtgctccttcaattctttggcgctca 1028 Query: 411 gctaccatctctctttcaagttgatctagaatctgtaggaccctttggtggtaacttctc 470 | |||||||||||||||||||||||| |||||||| || ||||| ||||| ||||||||| Sbjct: 1027 gataccatctctctttcaagttgatcaagaatctgcagaaccctctggtgataacttctc 968 Query: 471 tcagattcaaccatcgcgataagtcgttgtaatgtcagcctttgttgttgggcttcaaca 530 |||||||| ||||| || || |||||||| || ||||| ||||| ||||| ||||||||| Sbjct: 967 tcagattcgaccattgcaattagtcgttgcaaggtcagtctttgctgttgagcttcaaca 908 Query: 531 gcagtcattgctgcaacagcttc 553 |||||||||| |||||| ||||| Sbjct: 907 gcagtcattgatgcaacggcttc 885
>gb|AY107599.1| Zea mays PCO115272 mRNA sequence Length = 1413 Score = 335 bits (169), Expect = 9e-89 Identities = 396/471 (84%), Gaps = 3/471 (0%) Strand = Plus / Minus Query: 84 gcgactttgctcgccagtacacggtcccgcttttcgatgaactcgtaagggaaccaacca 143 |||||||| || || || ||||| || || || |||||| | ||||| |||||||| ||| Sbjct: 1203 gcgactttacttgcaagcacacgctctcgtttctcgatgtagtcgtaggggaaccagcca 1144 Query: 144 gctttccccctgcactcaccttcagcccatccattgtttgacaccttccggaccactatg 203 ||| |||||||||| |||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 1143 gctctccccctgcattcaccttcggcccatccattgttcgacacctttcggaccactatg 1084 Query: 204 tagtcaccggttgccaggttgagctcagtttcagtctcagctcggtatgactggatcgcc 263 |||||||| | || |||||||||||||| || |||| ||||| ||||| ||||| ||| Sbjct: 1083 tagtcaccagctgaaaggttgagctcagtgtcgctctctgctcgatatgattggattgcc 1024 Query: 264 tcagccaggaagtgctccactgtctccaccaattcggcaactgttggagtcctcatgaat 323 ||||||||||| | |||||| ||||| ||||| || || || || | ||||||||||| Sbjct: 1023 tcagccaggaaatactccacggtctcgaccaactctgcgaccgt---attcctcatgaat 967 Query: 324 ataccgttaacttcttcatatgaaggtggcggtggcatagagttctcaatgactggagga 383 ||||| || ||||||||||||| ||| || || ||||| || |||||| || |||||| Sbjct: 966 ataccattgacttcttcatatgcaggcggtggaggcatggaactctcaaccaccggagga 907 Query: 384 ggtgctccttcaattctttggcgctcagctaccatctctctttcaagttgatctagaatc 443 ||||| |||||||||||||||||||||| |||||||||||| ||||||||||| ||||| Sbjct: 906 ggtgccccttcaattctttggcgctcagataccatctctctctcaagttgatcaagaatt 847 Query: 444 tgtaggaccctttggtggtaacttctctcagattcaaccatcgcgataagtcgttgtaat 503 ||||||||| |||||||||| ||||||| |||||||||| || ||||| || || | | Sbjct: 846 tgtaggaccttttggtggtagtttctctctgattcaaccaatgcaataagacgctgcagt 787 Query: 504 gtcagcctttgttgttgggcttcaacagcagtcattgctgcaacagcttct 554 ||||| ||||| |||||| ||||||| ||||||||||| || | ||||||| Sbjct: 786 gtcagtctttgctgttggccttcaacggcagtcattgcggccaaagcttct 736
>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete sequence Length = 152172 Score = 165 bits (83), Expect = 2e-37 Identities = 140/159 (88%) Strand = Plus / Minus Query: 262 cctcagccaggaagtgctccactgtctccaccaattcggcaactgttggagtcctcatga 321 ||||||||| |||| ||||| || ||||||||||| || ||||||||| ||||||||| Sbjct: 143250 cctcagccaagaagaattccacagtttccaccaattcagcgactgttggattcctcatga 143191 Query: 322 atataccgttaacttcttcatatgaaggtggcggtggcatagagttctcaatgactggag 381 | | |||||||| |||||||||||||||||| ||||||||||| |||||| |||||| Sbjct: 143190 aaacaccgttaatttcttcatatgaaggtggtggtggcatagaactctcaacagctggag 143131 Query: 382 gaggtgctccttcaattctttggcgctcagctaccatct 420 |||||||||||||||||||||||||||||| |||||||| Sbjct: 143130 gaggtgctccttcaattctttggcgctcagataccatct 143092 Score = 149 bits (75), Expect = 1e-32 Identities = 123/139 (88%) Strand = Plus / Minus Query: 51 atgtatggctcaatgaacttctagaagacctgggcgactttgctcgccagtacacggtcc 110 |||||||||||| ||||| ||||||||||||||||||||| || || || ||||||||| Sbjct: 143695 atgtatggctcattgaacgcctagaagacctgggcgactttacttgcaagcacacggtcc 143636 Query: 111 cgcttttcgatgaactcgtaagggaaccaaccagctttccccctgcactcaccttcagcc 170 | || |||||| | |||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 143635 cttttctcgatgtagtcgtaagggaaccagccagctttccctctgcattcaccttctgcc 143576 Query: 171 catccattgtttgacacct 189 ||||||||||||||||||| Sbjct: 143575 catccattgtttgacacct 143557 Score = 85.7 bits (43), Expect = 1e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 186 accttccggaccactatgtagtcaccggttgccaggttgagctcagtttcagtctcagct 245 ||||||||||| ||||| |||||||| | |||||||||||||||||||||| ||||||| Sbjct: 143447 accttccggacaactatatagtcaccagctgccaggttgagctcagtttcactctcagca 143388 Query: 246 cggtatgactggatcgcct 264 || || |||||||| |||| Sbjct: 143387 cgataagactggatggcct 143369 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 419 ctctctttcaagttgatctagaatctgtaggaccctttggtggtaacttctctcagattc 478 |||||||||||||||||| |||||||| || ||||| ||||| ||||||||||||||||| Sbjct: 142969 ctctctttcaagttgatcaagaatctgcagaaccctctggtgataacttctctcagattc 142910 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 492 agtcgttgtaatgtcagcctttgttgttgggcttcaacagcagtcattgctgcaacagct 551 |||||||| || ||||| ||||| ||||| ||||||||||||||||||| |||||| ||| Sbjct: 142800 agtcgttgcaaggtcagtctttgctgttgagcttcaacagcagtcattgatgcaacggct 142741 Query: 552 tc 553 || Sbjct: 142740 tc 142739
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 165 bits (83), Expect = 2e-37 Identities = 140/159 (88%) Strand = Plus / Plus Query: 262 cctcagccaggaagtgctccactgtctccaccaattcggcaactgttggagtcctcatga 321 ||||||||| |||| ||||| || ||||||||||| || ||||||||| ||||||||| Sbjct: 19233131 cctcagccaagaagaattccacagtttccaccaattcagcgactgttggattcctcatga 19233190 Query: 322 atataccgttaacttcttcatatgaaggtggcggtggcatagagttctcaatgactggag 381 | | |||||||| |||||||||||||||||| ||||||||||| |||||| |||||| Sbjct: 19233191 aaacaccgttaatttcttcatatgaaggtggtggtggcatagaactctcaacagctggag 19233250 Query: 382 gaggtgctccttcaattctttggcgctcagctaccatct 420 |||||||||||||||||||||||||||||| |||||||| Sbjct: 19233251 gaggtgctccttcaattctttggcgctcagataccatct 19233289 Score = 149 bits (75), Expect = 1e-32 Identities = 123/139 (88%) Strand = Plus / Plus Query: 51 atgtatggctcaatgaacttctagaagacctgggcgactttgctcgccagtacacggtcc 110 |||||||||||| ||||| ||||||||||||||||||||| || || || ||||||||| Sbjct: 19232686 atgtatggctcattgaacgcctagaagacctgggcgactttacttgcaagcacacggtcc 19232745 Query: 111 cgcttttcgatgaactcgtaagggaaccaaccagctttccccctgcactcaccttcagcc 170 | || |||||| | |||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 19232746 cttttctcgatgtagtcgtaagggaaccagccagctttccctctgcattcaccttctgcc 19232805 Query: 171 catccattgtttgacacct 189 ||||||||||||||||||| Sbjct: 19232806 catccattgtttgacacct 19232824 Score = 85.7 bits (43), Expect = 1e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 186 accttccggaccactatgtagtcaccggttgccaggttgagctcagtttcagtctcagct 245 ||||||||||| ||||| |||||||| | |||||||||||||||||||||| ||||||| Sbjct: 19232934 accttccggacaactatatagtcaccagctgccaggttgagctcagtttcactctcagca 19232993 Query: 246 cggtatgactggatcgcct 264 || || |||||||| |||| Sbjct: 19232994 cgataagactggatggcct 19233012 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 419 ctctctttcaagttgatctagaatctgtaggaccctttggtggtaacttctctcagattc 478 |||||||||||||||||| |||||||| || ||||| ||||| ||||||||||||||||| Sbjct: 19233412 ctctctttcaagttgatcaagaatctgcagaaccctctggtgataacttctctcagattc 19233471 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 492 agtcgttgtaatgtcagcctttgttgttgggcttcaacagcagtcattgctgcaacagct 551 |||||||| || ||||| ||||| ||||| ||||||||||||||||||| |||||| ||| Sbjct: 19233581 agtcgttgcaaggtcagtctttgctgttgagcttcaacagcagtcattgatgcaacggct 19233640 Query: 552 tc 553 || Sbjct: 19233641 tc 19233642
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 165 bits (83), Expect = 2e-37 Identities = 140/159 (88%) Strand = Plus / Plus Query: 262 cctcagccaggaagtgctccactgtctccaccaattcggcaactgttggagtcctcatga 321 ||||||||| |||| ||||| || ||||||||||| || ||||||||| ||||||||| Sbjct: 19244407 cctcagccaagaagaattccacagtttccaccaattcagcgactgttggattcctcatga 19244466 Query: 322 atataccgttaacttcttcatatgaaggtggcggtggcatagagttctcaatgactggag 381 | | |||||||| |||||||||||||||||| ||||||||||| |||||| |||||| Sbjct: 19244467 aaacaccgttaatttcttcatatgaaggtggtggtggcatagaactctcaacagctggag 19244526 Query: 382 gaggtgctccttcaattctttggcgctcagctaccatct 420 |||||||||||||||||||||||||||||| |||||||| Sbjct: 19244527 gaggtgctccttcaattctttggcgctcagataccatct 19244565 Score = 149 bits (75), Expect = 1e-32 Identities = 123/139 (88%) Strand = Plus / Plus Query: 51 atgtatggctcaatgaacttctagaagacctgggcgactttgctcgccagtacacggtcc 110 |||||||||||| ||||| ||||||||||||||||||||| || || || ||||||||| Sbjct: 19243962 atgtatggctcattgaacgcctagaagacctgggcgactttacttgcaagcacacggtcc 19244021 Query: 111 cgcttttcgatgaactcgtaagggaaccaaccagctttccccctgcactcaccttcagcc 170 | || |||||| | |||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 19244022 cttttctcgatgtagtcgtaagggaaccagccagctttccctctgcattcaccttctgcc 19244081 Query: 171 catccattgtttgacacct 189 ||||||||||||||||||| Sbjct: 19244082 catccattgtttgacacct 19244100 Score = 85.7 bits (43), Expect = 1e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 186 accttccggaccactatgtagtcaccggttgccaggttgagctcagtttcagtctcagct 245 ||||||||||| ||||| |||||||| | |||||||||||||||||||||| ||||||| Sbjct: 19244210 accttccggacaactatatagtcaccagctgccaggttgagctcagtttcactctcagca 19244269 Query: 246 cggtatgactggatcgcct 264 || || |||||||| |||| Sbjct: 19244270 cgataagactggatggcct 19244288 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 419 ctctctttcaagttgatctagaatctgtaggaccctttggtggtaacttctctcagattc 478 |||||||||||||||||| |||||||| || ||||| ||||| ||||||||||||||||| Sbjct: 19244688 ctctctttcaagttgatcaagaatctgcagaaccctctggtgataacttctctcagattc 19244747 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 492 agtcgttgtaatgtcagcctttgttgttgggcttcaacagcagtcattgctgcaacagct 551 |||||||| || ||||| ||||| ||||| ||||||||||||||||||| |||||| ||| Sbjct: 19244857 agtcgttgcaaggtcagtctttgctgttgagcttcaacagcagtcattgatgcaacggct 19244916 Query: 552 tc 553 || Sbjct: 19244917 tc 19244918
>ref|XM_473352.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1110 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 476 ttcaaccatcgcgataagtcgttgtaatgtcagcctttgttgttgggcttcaacagcagt 535 |||||||||||| ||||| || |||||||||| |||||||| || || ||||| |||| Sbjct: 705 ttcaaccatcgcaataaggcgctgtaatgtcaatctttgttgctgagcctcaacggcagc 646 Query: 536 cattgctgcaacagcttc 553 |||||||||||||||||| Sbjct: 645 cattgctgcaacagcttc 628
>emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011L07, complete sequence Length = 143585 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 480 accatcgcgataagtcgttgtaatgtcagcctttgttgttgggcttcaacagcagtcatt 539 |||||||| ||||| || |||||||||| |||||||| || || ||||| |||| |||| Sbjct: 57839 accatcgcaataaggcgctgtaatgtcaatctttgttgctgagcctcaacggcagccatt 57898 Query: 540 gctgcaacagcttc 553 |||||||||||||| Sbjct: 57899 gctgcaacagcttc 57912
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 480 accatcgcgataagtcgttgtaatgtcagcctttgttgttgggcttcaacagcagtcatt 539 |||||||| ||||| || |||||||||| |||||||| || || ||||| |||| |||| Sbjct: 26990138 accatcgcaataaggcgctgtaatgtcaatctttgttgctgagcctcaacggcagccatt 26990197 Query: 540 gctgcaacagcttc 553 |||||||||||||| Sbjct: 26990198 gctgcaacagcttc 26990211
>ref|NM_119632.2| Arabidopsis thaliana clathrin binding AT4G34660 mRNA, complete cds Length = 1610 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 129 taagggaaccaaccagctttccccctgcactcaccttcagcccatcca 176 |||||||||||||||||||| || |||| |||||||| ||||||||| Sbjct: 1205 taagggaaccaaccagctttgcctttgcattcaccttcggcccatcca 1158
>gb|AY096478.1| Arabidopsis thaliana unknown protein (At4g34660) mRNA, complete cds Length = 1138 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 129 taagggaaccaaccagctttccccctgcactcaccttcagcccatcca 176 |||||||||||||||||||| || |||| |||||||| ||||||||| Sbjct: 1049 taagggaaccaaccagctttgcctttgcattcaccttcggcccatcca 1002
>gb|AY072132.1| Arabidopsis thaliana unknown protein (At4g34660) mRNA, complete cds Length = 1639 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 129 taagggaaccaaccagctttccccctgcactcaccttcagcccatcca 176 |||||||||||||||||||| || |||| |||||||| ||||||||| Sbjct: 1207 taagggaaccaaccagctttgcctttgcattcaccttcggcccatcca 1160
>emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 82 Length = 195165 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 129 taagggaaccaaccagctttccccctgcactcaccttcagcccatcca 176 |||||||||||||||||||| || |||| |||||||| ||||||||| Sbjct: 431 taagggaaccaaccagctttgcctttgcattcaccttcggcccatcca 478
>emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 81 Length = 195921 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 129 taagggaaccaaccagctttccccctgcactcaccttcagcccatcca 176 |||||||||||||||||||| || |||| |||||||| ||||||||| Sbjct: 191352 taagggaaccaaccagctttgcctttgcattcaccttcggcccatcca 191399
>emb|AL023094.2|ATT4L20 Arabidopsis thaliana DNA chromosome 4, BAC clone T4L20 (ESSA project) Length = 125502 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 129 taagggaaccaaccagctttccccctgcactcaccttcagcccatcca 176 |||||||||||||||||||| || |||| |||||||| ||||||||| Sbjct: 81663 taagggaaccaaccagctttgcctttgcattcaccttcggcccatcca 81710
>gb|AF367774.1|AF367774 Arabidopsis thaliana SH3 domain-containing protein 2 mRNA, complete cds Length = 1594 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 129 taagggaaccaaccagctttccccctgcactcaccttcagcccatcca 176 |||||||||||||||||||| || |||| |||||||| ||||||||| Sbjct: 1212 taagggaaccaaccagctttgcctttgcattcaccttcggcccatcca 1165
>emb|BX827471.1|CNS0A3PF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS59ZH07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1526 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 129 taagggaaccaaccagctttccccctgcactcaccttcagcccatcca 176 |||||||||||||||||||| || |||| |||||||| ||||||||| Sbjct: 1203 taagggaaccaaccagctttgcctttgcattcaccttcggcccatcca 1156
>gb|AY087158.1| Arabidopsis thaliana clone 32357 mRNA, complete sequence Length = 1595 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 129 taagggaaccaaccagctttccccctgcactcaccttcagcccatcca 176 |||||||||||||||||||| || |||| |||||||| ||||||||| Sbjct: 1190 taagggaaccaaccagctttgcctttgcattcaccttcggcccatcca 1143
>emb|X84017.1|VAAMOL V.ammodytes ammodytin L gene Length = 3056 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 390 ccttcaattctttggcgctcagc 412 ||||||||||||||||||||||| Sbjct: 2123 ccttcaattctttggcgctcagc 2145
>emb|X76731.1|VAAMMC V.ammodytes gene for ammodytoxin C Length = 4204 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 391 cttcaattctttggcgctcagc 412 |||||||||||||||||||||| Sbjct: 2830 cttcaattctttggcgctcagc 2851
>gb|AC150574.2| Bos taurus BAC CH240-237H4 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 142758 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 3012 tcaattctttggcgctcagct 3032
>gb|AC150866.2| Bos taurus BAC CH240-290G4 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 170911 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 39310 tcaattctttggcgctcagct 39290 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 105946 tcaattctttggcgctcagc 105965
>gb|AC150888.5| Bos taurus BAC CH240-475A10 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 186059 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 176678 tcaattctttggcgctcagct 176698
>gb|AC150540.2| Bos taurus BAC CH240-385H19 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 172471 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 170266 tcaattctttggcgctcagct 170286 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 84176 tcaattctttggcgctcagct 84156
>gb|AC150753.3| Bos taurus BAC CH240-283G19 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 181464 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 105239 tcaattctttggcgctcagct 105259
>gb|AC150515.3| Bos taurus BAC CH240-118E9 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 171213 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 52010 tcaattctttggcgctcagct 52030 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 43186 tcaattctttggcgctcagc 43167
>gb|AC150542.2| Bos taurus BAC CH240-382E8 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 191058 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 85908 tcaattctttggcgctcagct 85928
>gb|AC150690.7| Bos taurus BAC CH240-151A24 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 194641 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 187997 tcaattctttggcgctcagct 188017
>gb|AC150752.4| Bos taurus BAC CH240-288E20 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 165924 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 105708 tcaattctttggcgctcagct 105728
>gb|AC150917.2| Bos taurus BAC CH240-430L1 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 186516 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 103816 tcaattctttggcgctcagct 103796 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 60888 tcaattctttggcgctcagc 60869
>gb|AC150887.4| Bos taurus BAC CH240-483B20 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 157543 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 44743 tcaattctttggcgctcagct 44763
>gb|AC150546.2| Bos taurus BAC CH240-77D21 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 203152 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 109285 tcaattctttggcgctcagct 109305 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 69225 tcaattctttggcgctcagct 69205
>gb|AC150482.2| Bos taurus BAC CH240-308E11 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 179880 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 157201 tcaattctttggcgctcagct 157181 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 87971 tcaattctttggcgctcagct 87991
>gb|AC149774.2| Bos taurus BAC CH240-10G15 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 186916 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 85565 tcaattctttggcgctcagct 85545
>gb|AC149720.2| Bos taurus BAC CH240-248M14 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 180339 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 10184 tcaattctttggcgctcagct 10164
>gb|AC149716.2| Bos taurus BAC CH240-31B10 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 171707 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 42550 tcaattctttggcgctcagct 42530
>gb|AC149669.2| Bos taurus BAC CH240-57J21 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 227069 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 89070 tcaattctttggcgctcagct 89050 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 154196 tcaattctttggcgctcagc 154215
>gb|AC091728.2| Bos taurus clone RP42-99M11, complete sequence Length = 162743 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 142904 tcaattctttggcgctcagct 142924
>gb|AC089992.2| Bos taurus clone RP42-210F11, complete sequence Length = 147922 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 11898 tcaattctttggcgctcagct 11918
>gb|DP000008.1| Bos taurus target 1 genomic scaffold Length = 2072671 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 1240071 tcaattctttggcgctcagct 1240091 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 11605 tcaattctttggcgctcagct 11625 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 944099 tcaattctttggcgctcagc 944080 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 938021 tcaattctttggcgctcagc 938002 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 519398 tcaattctttggcgctcagc 519379
>emb|AL954205.1| Pan troglodytes chromosome 22 clone RP43-046M07 map q21.1, complete sequence Length = 174216 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ctttccccctgcactcacctt 165 ||||||||||||||||||||| Sbjct: 50919 ctttccccctgcactcacctt 50939
>emb|AJ780930.1| Bos taurus gart gene, son gene, donson gene and cryzl1 gene Length = 121958 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 85559 tcaattctttggcgctcagct 85539 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 21567 tcaattctttggcgctcagct 21547
>gb|AC100788.8| Homo sapiens chromosome 17, clone CTD-2373H9, complete sequence Length = 126502 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 ccctgcactcaccttcagccc 171 ||||||||||||||||||||| Sbjct: 60559 ccctgcactcaccttcagccc 60539
>gb|DQ422600.1| Uncultured bacterium clone med-tb04-0m-f10 putative proteorhodopsin gene, partial cds Length = 327 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 526 caacagcagtcattgctgcaa 546 ||||||||||||||||||||| Sbjct: 79 caacagcagtcattgctgcaa 59
>gb|DQ422484.1| Uncultured bacterium clone med-tb04-50m-d11 putative proteorhodopsin gene, partial cds Length = 327 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 526 caacagcagtcattgctgcaa 546 ||||||||||||||||||||| Sbjct: 79 caacagcagtcattgctgcaa 59
>gb|DQ422215.1| Uncultured bacterium clone med-0m-f5 putative proteorhodopsin gene, partial cds Length = 327 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 526 caacagcagtcattgctgcaa 546 ||||||||||||||||||||| Sbjct: 79 caacagcagtcattgctgcaa 59
>emb|AL954206.1| Pan troglodytes chromosome 22 clone PTB-052N04 map q21.1, complete sequence Length = 153753 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ctttccccctgcactcacctt 165 ||||||||||||||||||||| Sbjct: 988 ctttccccctgcactcacctt 1008
>emb|AL954204.1| Pan troglodytes chromosome 22 clone PTB-051G08 map q21.1, complete sequence Length = 146898 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ctttccccctgcactcacctt 165 ||||||||||||||||||||| Sbjct: 83982 ctttccccctgcactcacctt 84002
>emb|AL954203.1| Pan troglodytes chromosome 22 clone RP43-019O24 map q21.1, complete sequence Length = 206110 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ctttccccctgcactcacctt 165 ||||||||||||||||||||| Sbjct: 150480 ctttccccctgcactcacctt 150500
>gb|AY957499.1| Bos taurus glutamate-cysteine ligase catalytic subunit (GCLC), MHC class II antigen (DSB), MHC class II antigen (DYA), MHC class II antigen (DYB), MHC class II antigen (DOB), transporter 2 ATP-binding cassette sub-family B (TAP2), proteasome subunit beta type 8 (PSMB8), transporter 1 ATP-binding cassette sub-family B (TAP1), proteosome subunit beta type 9 (PSMB9), histone H2B-like (H2B), MHC class II antigen (DMB), MHC class II antigen (DMA), bromodomain containing 2 (BRD2), MHC class II antigen (DOA), collagen type XI alpha 2 (COL11A2), retinoid X receptor beta (RXRB), solute carrier family 39 zinc transporter member 7 (HKE4), and hydroxysteroid (17-beta) dehydrogenase 8 (HKE6) genes, complete cds; and ring finger protein 1 (RING1) gene, partial cds Length = 447010 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 86381 tcaattctttggcgctcagct 86361 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 255257 tcaattctttggcgctcagc 255238 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 189470 tcaattctttggcgctcagc 189489
>dbj|AK123925.1| Homo sapiens cDNA FLJ41931 fis, clone PERIC2004429 Length = 1834 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 ccctgcactcaccttcagccc 171 ||||||||||||||||||||| Sbjct: 1566 ccctgcactcaccttcagccc 1546
>gb|AC103584.15| Bos taurus clone rp42-51p13, complete sequence Length = 177017 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 98773 tcaattctttggcgctcagct 98753
>gb|AC107065.5| Bos taurus clone rp42-513g13, complete sequence Length = 175949 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 138858 tcaattctttggcgctcagct 138878
>gb|AC098687.3| Bos taurus clone rp42-194o5, complete sequence Length = 156543 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 105294 tcaattctttggcgctcagct 105314
>gb|AC096629.11| Bos taurus clone rp42-152a4, complete sequence Length = 191756 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 122150 tcaattctttggcgctcagct 122170
>gb|DQ381152.1| Bos taurus BTA17 39037 genomic sequence contig containing highly polymorphic single nucleotide sites Length = 67848 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 57001 tcaattctttggcgctcagct 56981
>gb|AF396756.1| Bos taurus isolate Bs1b-bac187 Y6 MHC class I antigen pseudogene, complete sequence Length = 5358 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 2972 tcaattctttggcgctcagct 2952
>gb|AF396755.1| Bos taurus isolate Bs1b MHC class I antigen pseudogene, complete sequence Length = 5360 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 2973 tcaattctttggcgctcagct 2953
>gb|AY319306.2| Bos taurus lactoferrin (Lf) gene, 5' flanking region exons 1, 2 and partial cds Length = 8212 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 1060 tcaattctttggcgctcagct 1040
>dbj|AB081095.1| Bos taurus bcnt, h-type bcnt genes, complete and partial cds Length = 92594 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 51768 tcaattctttggcgctcagct 51748
>ref|XM_395099.2| PREDICTED: Apis mellifera similar to hypothetical protein (LOC411630), mRNA Length = 2757 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 tgctccttcaattctttggcg 406 ||||||||||||||||||||| Sbjct: 1022 tgctccttcaattctttggcg 1002
>gb|AC147843.3| Ovis aries clone CH243-261D1, complete sequence Length = 151538 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 37677 tcaattctttggcgctcagct 37657 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 23033 tcaattctttggcgctcagc 23014
>dbj|D88033.2| Bos taurus gene for selenoprotein P-like protein, complete cds Length = 6246 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 2597 tcaattctttggcgctcagct 2617
>dbj|AP000034.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 5/28, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 ctttccccctgcactcacctt 165 ||||||||||||||||||||| Sbjct: 93843 ctttccccctgcactcacctt 93823
>gb|AC007383.4| Homo sapiens BAC clone RP11-310K15 from 2, complete sequence Length = 214978 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 431 ttgatctagaatctgtaggac 451 ||||||||||||||||||||| Sbjct: 16391 ttgatctagaatctgtaggac 16411
>gb|AF238612.1|AF238612 Bos taurus interferon tau (IFN-tau-c2) gene, complete cds Length = 2911 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 1138 tcaattctttggcgctcagct 1118
>gb|AF238611.1|AF238611 Bos taurus interferon tau (IFN-tau-c3) gene, complete cds Length = 2915 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 1139 tcaattctttggcgctcagct 1119
>gb|DQ339249.1| Uncultured bacterium clone S-SOM-H9 predicted proteorhodopsin gene, partial cds Length = 327 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 526 caacagcagtcattgctgcaa 546 ||||||||||||||||||||| Sbjct: 79 caacagcagtcattgctgcaa 59
>gb|AF325420.1|F325416S04 Ovis aries cystic fibrosis transmembrane conductance regulator (CFTR) gene, intron 2 Length = 5415 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 3156 tcaattctttggcgctcagct 3176
>gb|DQ203706.1| Uncultured bacterium clone medHO1-55-E5 predicted proteorhodopsin gene, partial cds Length = 327 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 526 caacagcagtcattgctgcaa 546 ||||||||||||||||||||| Sbjct: 79 caacagcagtcattgctgcaa 59
>gb|AC146966.3| Bos taurus clone RP42-139G14, complete sequence Length = 179474 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 11605 tcaattctttggcgctcagct 11625
>dbj|AP001713.1| Homo sapiens genomic DNA, chromosome 21q, section 57/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ctttccccctgcactcacctt 165 ||||||||||||||||||||| Sbjct: 180217 ctttccccctgcactcacctt 180237
>gb|M60903.1|BOVINFAII Bovine trophoblast interferon-1 gene, complete cds Length = 3217 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagct 413 ||||||||||||||||||||| Sbjct: 652 tcaattctttggcgctcagct 632
>dbj|AP000264.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:T1844, complete sequence Length = 60455 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ctttccccctgcactcacctt 165 ||||||||||||||||||||| Sbjct: 51170 ctttccccctgcactcacctt 51190
>dbj|AP000177.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone Q78C10-f32E9, segment 4/21, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ctttccccctgcactcacctt 165 ||||||||||||||||||||| Sbjct: 43056 ctttccccctgcactcacctt 43076
>dbj|AP000101.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, Q78C10-149C3 region, segment 4/20 Length = 100000 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 ctttccccctgcactcacctt 165 ||||||||||||||||||||| Sbjct: 43056 ctttccccctgcactcacctt 43076
>gb|AC092193.4| Bos taurus clone RP42-459A17, complete sequence Length = 258544 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 71782 tcaattctttggcgctcagc 71763
>gb|AC149676.2| Bos taurus BAC CH240-43C16 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 168416 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 47044 tcaattctttggcgctcagc 47063
>gb|AC150653.5| Bos taurus BAC CH240-226L9 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 158246 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 144918 tcaattctttggcgctcagc 144899
>gb|AC150855.6| Bos taurus BAC CH240-472P12 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 168955 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 137921 tcaattctttggcgctcagc 137940
>gb|AC150569.2| Bos taurus BAC CH240-223K16 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 186055 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 781 tcaattctttggcgctcagc 762
>gb|AC150524.3| Bos taurus BAC CH240-89P8 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 189720 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 55995 tcaattctttggcgctcagc 55976
>gb|AC151060.4| Bos taurus BAC CH240-293H4 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 160650 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 101068 tcaattctttggcgctcagc 101049
>gb|AC150650.5| Bos taurus BAC CH240-447L3 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 148126 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 82529 tcaattctttggcgctcagc 82548
>gb|AC150674.4| Bos taurus BAC CH240-443I13 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 194860 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 122805 tcaattctttggcgctcagc 122786
>gb|AC150709.3| Bos taurus BAC CH240-273I10 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 142944 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 129188 tcaattctttggcgctcagc 129207
>gb|AC150881.4| Bos taurus BAC CH240-354J15 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 174996 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 135131 tcaattctttggcgctcagc 135150
>gb|AC150879.3| Bos taurus BAC CH240-491H11 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 175314 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 29862 tcaattctttggcgctcagc 29881 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 23488 tcaattctttggcgctcagc 23507
>gb|AC149783.2| Bos taurus BAC CH240-3K17 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 205084 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 117659 tcaattctttggcgctcagc 117640 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 109048 tcaattctttggcgctcagc 109067
>gb|AC150548.2| Bos taurus BAC CH240-72J19 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 176133 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 57918 tcaattctttggcgctcagc 57899
>gb|AC149694.2| Bos taurus BAC CH240-423C21 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 186118 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 41490 tcaattctttggcgctcagc 41509
>gb|AY944236.1| Bos taurus prion preproprotein (PRNP) and prion-like protein doppel preproprotein (PRND) genes, complete cds; and RASSF2 gene, complete sequence Length = 207929 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 95648 tcaattctttggcgctcagc 95667
>gb|AC087843.2| Bos taurus clone RP42-550C12, complete sequence Length = 157165 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 76553 tcaattctttggcgctcagc 76534
>gb|AC090031.2| Bos taurus clone RP42-341K3, complete sequence Length = 213841 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 76725 tcaattctttggcgctcagc 76706 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 70647 tcaattctttggcgctcagc 70628
>emb|BX649478.11| Zebrafish DNA sequence from clone DKEY-149F22 in linkage group 8, complete sequence Length = 79414 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 actcaccttcagcccatcca 176 |||||||||||||||||||| Sbjct: 30537 actcaccttcagcccatcca 30518
>gb|AY644517.2| Bos taurus T cell receptor gamma (TCRG) gene, partial sequence Length = 243699 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 191960 tcaattctttggcgctcagc 191941
>gb|AC133864.32| Medicago truncatula clone mth2-18d12, complete sequence Length = 125734 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 acaacgccaaggacatgtat 56 |||||||||||||||||||| Sbjct: 13431 acaacgccaaggacatgtat 13412
>emb|AL117341.26|HSBA512N4 Human DNA sequence from clone RP11-512N4 on chromosome 10 Contains part of the gene for MOB protein, two novel genes and a CpG island, complete sequence Length = 181300 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 tttggtggtaacttctctca 473 |||||||||||||||||||| Sbjct: 106746 tttggtggtaacttctctca 106727
>emb|Z98533.1|SPAC6F12 S.pombe chromosome I cosmid c6F12 Length = 44658 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 cagcctttgttgttgggctt 525 |||||||||||||||||||| Sbjct: 3957 cagcctttgttgttgggctt 3938
>emb|BX571661.1| Wolinella succinogenes, complete genome; segment 5/7 Length = 346613 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 ccagctttccccctgcactc 160 |||||||||||||||||||| Sbjct: 68165 ccagctttccccctgcactc 68184
>gb|DQ451555.1| Bos taurus BTA01 scaffold155476_15944 genomic sequence contig containing highly polymorphic single nucleotide sites Length = 5980 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 622 tcaattctttggcgctcagc 603
>emb|BX545915.7| Zebrafish DNA sequence from clone DKEY-41B16 in linkage group 3, complete sequence Length = 192468 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ttataatgcacattgtacaa 40 |||||||||||||||||||| Sbjct: 26340 ttataatgcacattgtacaa 26321
>gb|AF396777.1| Bos taurus clone p68.3 MHC class I antigen gene, 5' UTR and partial cds Length = 1169 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 460 tcaattctttggcgctcagc 441
>gb|AF332697.1|AF332697 Vipera ammodytes Bov-B LINE, complete sequence Length = 4606 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 3543 tcaattctttggcgctcagc 3524
>gb|U15731.2|BTU15731 Bos taurus somatotropin receptor gene, exon 1 and liver-specific promoter region Length = 25688 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 23609 tcaattctttggcgctcagc 23590
>ref|NM_001018718.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC6F12.02), partial mRNA Length = 1704 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 cagcctttgttgttgggctt 525 |||||||||||||||||||| Sbjct: 621 cagcctttgttgttgggctt 602
>gb|AC148038.3| Ovis aries clone CH243-361I2, complete sequence Length = 198973 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 63848 tcaattctttggcgctcagc 63867
>gb|AC153636.2| Mus musculus 6 BAC RP23-76E12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 164242 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 aatgtcagcctttgttgttg 520 |||||||||||||||||||| Sbjct: 54263 aatgtcagcctttgttgttg 54244
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aatataccgttaacttcttc 340 |||||||||||||||||||| Sbjct: 536996 aatataccgttaacttcttc 536977
>emb|CT025756.17| Zebrafish DNA sequence from clone CH211-81M17 in linkage group 22, complete sequence Length = 162828 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 gaacattataatgcacattg 35 |||||||||||||||||||| Sbjct: 23664 gaacattataatgcacattg 23645
>emb|AJ278907.1|BTA278907 Bos taurus partial ed1 gene for ectodysplasin A, exons 4-9 Length = 37331 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 5997 tcaattctttggcgctcagc 6016
>emb|AJ871176.1| Bos taurus ABCG2 gene, PKD2 gene and SPP1 gene, clone RPCI42_5K14 Length = 171712 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 48729 tcaattctttggcgctcagc 48748
>gb|AF013021.1|AF013021 Walterinnesia aegyptia clone WA12 Bov-B LINE repeat region, partial sequence Length = 530 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 354 tcaattctttggcgctcagc 373
>gb|AF013018.1|AF013018 Walterinnesia aegyptia clone WA2 Bov-B LINE repeat region, partial sequence Length = 551 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 338 tcaattctttggcgctcagc 357
>gb|AF013012.1|AF013012 Bothrops alternatus clone BA6 Bov-B LINE repeat region, partial sequence Length = 408 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 254 tcaattctttggcgctcagc 273
>gb|AF013006.1|AF013006 Crotalus horridus clone CH2 Bov-B LINE repeat region, partial sequence Length = 543 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 330 tcaattctttggcgctcagc 349
>gb|AF012999.1|AF012999 Vipera palaestinae clone VP1 Bov-B LINE repeat region, partial sequence Length = 568 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 358 tcaattctttggcgctcagc 377
>gb|AF012998.1|AF012998 Vipera ammodytes clone VA30 Bov-B LINE repeat region, partial sequence Length = 521 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 358 tcaattctttggcgctcagc 377
>gb|AF012997.1|AF012997 Vipera ammodytes clone VA21 Bov-B LINE repeat region, partial sequence Length = 554 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 358 tcaattctttggcgctcagc 377
>gb|AF012995.1|AF012995 Vipera ammodytes clone VA14 Bov-B LINE repeat region, partial sequence Length = 546 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 358 tcaattctttggcgctcagc 377
>gb|AF012994.1|AF012994 Vipera ammodytes clone VA8 Bov-B LINE repeat region, partial sequence Length = 549 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 350 tcaattctttggcgctcagc 369
>gb|AF012993.1|AF012993 Vipera ammodytes clone VA5 Bov-B LINE repeat region, partial sequence Length = 558 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 345 tcaattctttggcgctcagc 364
>emb|AL773593.10| Zebrafish DNA sequence from clone CH211-202N20 in linkage group 5, complete sequence Length = 202726 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 gaacattataatgcacattg 35 |||||||||||||||||||| Sbjct: 83767 gaacattataatgcacattg 83786
>gb|L13373.1|BOVANTMIC Bos taurus antimicrobial protein exons 1-2, complete cds Length = 3374 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 tcaattctttggcgctcagc 412 |||||||||||||||||||| Sbjct: 469 tcaattctttggcgctcagc 488
>dbj|D89221.1| Schizosaccharomyces pombe mRNA, partial cds, clone: SY 1310 Length = 1633 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 cagcctttgttgttgggctt 525 |||||||||||||||||||| Sbjct: 354 cagcctttgttgttgggctt 335
>dbj|AB027851.1| Schizosaccharomyces pombe gene for Hypothetical nuclear protein, partial cds, clone:SA54 Length = 651 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 cagcctttgttgttgggctt 525 |||||||||||||||||||| Sbjct: 180 cagcctttgttgttgggctt 161
>dbj|AB025941.1| Schizosaccharomyces pombe rst2+ gene, complete cds Length = 3837 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 cagcctttgttgttgggctt 525 |||||||||||||||||||| Sbjct: 2106 cagcctttgttgttgggctt 2087 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,203,757 Number of Sequences: 3902068 Number of extensions: 4203757 Number of successful extensions: 79549 Number of sequences better than 10.0: 127 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79057 Number of HSP's gapped (non-prelim): 492 length of query: 554 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 531 effective length of database: 17,143,297,704 effective search space: 9103091080824 effective search space used: 9103091080824 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
