>STE12_KLULA (Q08400) Protein STE12|
          Length = 666

 Score = 36.2 bits (82), Expect = 0.094
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
 Frame = +3

Query: 192 HMYTNVLHLPSTACATVSQIISALSTQIGSEDCEEDVRSYNAFLCPTNFRATPKMRAF-V 368
           +M+ N+L +  +    V+ ++     Q  S D   DV S    + P+N+R+TPK   F +
Sbjct: 508 YMFCNMLAVDPSLNMGVNPVVDPFYGQNHSMDVAHDVYSPQEVVYPSNYRSTPKAAYFNM 567

Query: 369 RSPWSSVHAKATAPPSTRN 425
           RSP    + +   PPS  N
Sbjct: 568 RSP----YGRNFPPPSAMN 582

>YNR6_YEAST (P53882) Hypothetical 67.4 kDa protein in RPS3-PSD1 intergenic|
           region
          Length = 636

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 35/135 (25%), Positives = 59/135 (43%)
 Frame = +3

Query: 117 LESLFQM*ITSFYSVASLSLIDCRQHMYTNVLHLPSTACATVSQIISALSTQIGSEDCEE 296
           + S   + ++S YS   L   D R  +++     PST       +IS   T + S     
Sbjct: 172 VSSSLSLSLSSSYSDTKLFSFDSRSSIFS-----PSTPT-----VISPSYTYLSSI---- 217

Query: 297 DVRSYNAFLCPTNFRATPKMRAFVRSPWSSVHAKATAPPSTRNLAIRFFTGFSSASMISD 476
              S  +F   T    +    + + SP +  +   T P S+RN +  F++  SS S  +D
Sbjct: 218 ---SATSFQISTTSELSSSWFSTISSPSTISNKDTTCPSSSRNTSTSFYS--SSLSSTND 272

Query: 477 WSLLDSSPRTKLSPT 521
           +S +  S  +KLSP+
Sbjct: 273 FSTISKS--SKLSPS 285

>ZN434_HUMAN (Q9NX65) Zinc finger protein 434|
          Length = 485

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
 Frame = -3

Query: 458 RRETCEKPYGEVPCARRGRGLGVYTGPRAPDKGSHLWRCAEVCGAEERIVGSDIFLTIL* 279
           R  T EKPY  + C +R      ++  R    G   ++CA VCG   +I  +    +   
Sbjct: 385 RTHTGEKPYQCIVCGKRFNNSSQFSAHRRIHTGESPYKCA-VCG---KIFNNSSHFS--- 437

Query: 278 ANLRGESGDDLANCSTCR*RQMKDIG------VHMLPAVDEREG 165
           A+ +  +G+    CS C     K+        VHM   +  +EG
Sbjct: 438 AHRKTHTGEKPYRCSHCERGFTKNSALTRHQTVHMKAVLSSQEG 481

>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)|
          Length = 3925

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
 Frame = +1

Query: 202  PMSFICRQRHVLQLARSSPLSP--RKLAQRIVRKMSDPTMRSSAPQTSAQRQR*EP-LSG 372
            P     RQ    Q  +   L P  + L Q  +++ S PT R SAP  S    + +P  S 
Sbjct: 3767 PSGAASRQPQTQQQQQGLGLQPPQQALTQARLQQQSQPTTRGSAPAASQPAGKPQPGPST 3826

Query: 373  ALGPVYTPRPRPRRAQGT 426
            A GP     PR  +  G+
Sbjct: 3827 ATGPQPAGPPRAEQTNGS 3844

>BSN_RAT (O88778) Bassoon protein|
          Length = 3937

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = +1

Query: 277  AQRIVRKMSDPTMRSSAPQTSAQRQR*EPLSGALGPVYTPRPRPRRAQGTSPYGFSQVSL 456
            +Q  +++ S PT RS+AP  S    + +P     GP   P P+P         G S+ + 
Sbjct: 3808 SQARLQQQSQPTTRSTAPAASHPAGKPQP-----GPTTAPGPQPAGLPRAEQAGSSKPAA 3862

Query: 457  RLP 465
            + P
Sbjct: 3863 KAP 3865


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,816,692
Number of Sequences: 219361
Number of extensions: 2706947
Number of successful extensions: 7999
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7995
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6655306086
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)