ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags27g04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_450273.1| Oryza sativa (japonica cultivar-group), mRNA 76 1e-10
2dbj|AK063577.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
4dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
5gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 44 0.46
6ref|XM_842922.1| Leishmania major strain Friedlin hypothetical p... 44 0.46
7ref|XM_952078.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.8
8ref|XM_952079.1| Neurospora crassa OR74A hypothetical protein ( ... 42 1.8
9ref|XM_328186.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.8
10ref|XM_328187.1| Neurospora crassa OR74A hypothetical protein ( ... 42 1.8
11emb|AL356815.1|NCB24H17 Neurospora crassa DNA linkage group II B... 42 1.8
12emb|AL355926.1|NCB17C10 Neurospora crassa DNA linkage group II B... 42 1.8
13emb|AL844895.6| Mouse DNA sequence from clone RP23-359N12 on chr... 42 1.8
14gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome 40 7.1
15gb|CP000081.1| Leishmania major chromosome 35, complete sequence 40 7.1
16gb|AC128706.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
17gb|AC134624.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
18gb|AC121268.7| Mus musculus chromosome 3, clone RP24-468O23, com... 40 7.1
19ref|XM_838146.1| Leishmania major strain Friedlin hypothetical p... 40 7.1
20ref|XM_850762.1| PREDICTED: Canis familiaris similar to round sp... 40 7.1
21ref|XM_850674.1| PREDICTED: Canis familiaris similar to round sp... 40 7.1
22ref|XM_533011.2| PREDICTED: Canis familiaris similar to round sp... 40 7.1
23ref|XM_850598.1| PREDICTED: Canis familiaris similar to round sp... 40 7.1
24gb|AC121816.3| Mus musculus BAC clone RP23-458H21 from chromosom... 40 7.1
25gb|AC010799.15| Homo sapiens chromosome 15, clone RP11-40J8, com... 40 7.1
26gb|AC147498.14| Medicago truncatula clone mth2-6f18, complete se... 40 7.1
27gb|AE008825.1| Salmonella typhimurium LT2, section 129 of 220 of... 40 7.1
28emb|AL445678.2|LMFL7845 Leishmania major Friedlin chromosome 35 ... 40 7.1
29gb|AC010015.5| Drosophila melanogaster 3L BAC RP98-9C21 (Roswell... 40 7.1
30gb|AC010061.6| Drosophila melanogaster 3L BAC RP98-11F16 (Roswel... 40 7.1
31tpg|BK002154.1| TPA: TPA_inf: Drosophila melanogaster HDC10274 (... 40 7.1
32gb|AY039708.1| Chlamydomonas reinhardtii clone UNG, genomic sequ... 40 7.1
33gb|AC019322.8| Homo sapiens chromosome 15, clone RP11-382B18, co... 40 7.1
34gb|AC111169.7| Homo sapiens chromosome 15, clone RP11-20D7, comp... 40 7.1
35dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
36gb|AC064874.4| Homo sapiens BAC clone RP11-680O16 from 2, comple... 40 7.1
37gb|AC139426.2| Homo sapiens chromosome 15, clone RP13-395E19, co... 40 7.1
38gb|AC135731.6| Homo sapiens chromosome 15, clone RP11-261B23, co... 40 7.1
39gb|AC021413.16| Homo sapiens chromosome 15, clone RP11-30N16, co... 40 7.1
40gb|AC018755.3|AC018755 Homo sapiens chromosome 19, BAC BC330783 ... 40 7.1
41emb|BX649578.14| Zebrafish DNA sequence from clone CH211-196L7 i... 40 7.1
42gb|AE003531.3| Drosophila melanogaster chromosome 3L, section 54... 40 7.1
43gb|AC167016.5| Mus musculus chromosome 3, clone RP23-76C12, comp... 40 7.1
44gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 7.1
45gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
46dbj|AP004526.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 7.1
47gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete ge... 40 7.1
48emb|AL607041.18| Mouse DNA sequence from clone RP23-434K11 on ch... 40 7.1
49emb|AL935172.8| Mouse DNA sequence from clone RP23-261J24 on chr... 40 7.1 
>ref|XM_450273.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 757

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 97/117 (82%)
 Strand = Plus / Minus

                                                                       
Query: 406 tcaagtagaagaaggcgctgtagttggagtagccgaagccggagaccatggcgaaggtgg 465
           |||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||| |  ||
Sbjct: 312 tcaagtagcagaaggcggtgtagttggagaagccgtaggcggaggccatggcgacgacgg 253

                                                                    
Query: 466 aggcggaggcaaagacgcactgtgacagccgcagcaccatgccgttncatgtccccg 522
           |||||  ||| |||||||| || |||| |||||||  ||| ||| | ||||||||||
Sbjct: 252 aggcgccggcgaagacgcattgcgacacccgcagcgacatcccgctccatgtccccg 196
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>dbj|AK063577.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-H03, full
           insert sequence
          Length = 757

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 97/117 (82%)
 Strand = Plus / Minus

                                                                       
Query: 406 tcaagtagaagaaggcgctgtagttggagtagccgaagccggagaccatggcgaaggtgg 465
           |||||||| |||||||| ||||||||||| ||||| || ||||| ||||||||| |  ||
Sbjct: 312 tcaagtagcagaaggcggtgtagttggagaagccgtaggcggaggccatggcgacgacgg 253

                                                                    
Query: 466 aggcggaggcaaagacgcactgtgacagccgcagcaccatgccgttncatgtccccg 522
           |||||  ||| |||||||| || |||| |||||||  ||| ||| | ||||||||||
Sbjct: 252 aggcgccggcgaagacgcattgcgacacccgcagcgacatcccgctccatgtccccg 196
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 89/108 (82%)
 Strand = Plus / Minus

                                                                           
Query: 415     agaaggcgctgtagttggagtagccgaagccggagaccatggcgaaggtggaggcggagg 474
               |||||||| ||||||||||| ||||| || ||||| ||||||||| |  |||||||  ||
Sbjct: 3691827 agaaggcggtgtagttggagaagccgtaggcggaggccatggcgacgacggaggcgccgg 3691768

                                                               
Query: 475     caaagacgcactgtgacagccgcagcaccatgccgttncatgtccccg 522
               | |||||||| || |||| |||||||  ||| ||| | ||||||||||
Sbjct: 3691767 cgaagacgcattgcgacacccgcagcgacatcccgctccatgtccccg 3691720
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>dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1695_A02
          Length = 156214

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 89/108 (82%)
 Strand = Plus / Minus

                                                                          
Query: 415    agaaggcgctgtagttggagtagccgaagccggagaccatggcgaaggtggaggcggagg 474
              |||||||| ||||||||||| ||||| || ||||| ||||||||| |  |||||||  ||
Sbjct: 100088 agaaggcggtgtagttggagaagccgtaggcggaggccatggcgacgacggaggcgccgg 100029

                                                              
Query: 475    caaagacgcactgtgacagccgcagcaccatgccgttncatgtccccg 522
              | |||||||| || |||| |||||||  ||| ||| | ||||||||||
Sbjct: 100028 cgaagacgcattgcgacacccgcagcgacatcccgctccatgtccccg 99981
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>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 450    accatggcgaaggtggaggcggaggc 475
              |||||||||||||||||||| |||||
Sbjct: 240234 accatggcgaaggtggaggccgaggc 240259
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>ref|XM_842922.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0317)
            partial mRNA
          Length = 1389

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 450  accatggcgaaggtggaggcggaggc 475
            |||||||||||||||||||| |||||
Sbjct: 1213 accatggcgaaggtggaggccgaggc 1238
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>ref|XM_952078.1| Neurospora crassa OR74A hypothetical protein (NCU01748.1) partial
           mRNA
          Length = 1383

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 429 ttggagtagccgaagccggag 449
           |||||||||||||||||||||
Sbjct: 770 ttggagtagccgaagccggag 750
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>ref|XM_952079.1| Neurospora crassa OR74A hypothetical protein ( hypothetical protein
           B17C10.280 [imported] - Neurospora crassa OR74A )
           (NCU01749.1) partial mRNA
          Length = 708

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 429 ttggagtagccgaagccggag 449
           |||||||||||||||||||||
Sbjct: 663 ttggagtagccgaagccggag 683
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>ref|XM_328186.1| Neurospora crassa OR74A hypothetical protein (NCU01748.1) partial
           mRNA
          Length = 1383

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 429 ttggagtagccgaagccggag 449
           |||||||||||||||||||||
Sbjct: 770 ttggagtagccgaagccggag 750
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>ref|XM_328187.1| Neurospora crassa OR74A hypothetical protein ( hypothetical protein
           B17C10.280 [imported] - Neurospora crassa OR74A )
           (NCU01749.1) partial mRNA
          Length = 708

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 429 ttggagtagccgaagccggag 449
           |||||||||||||||||||||
Sbjct: 663 ttggagtagccgaagccggag 683
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>emb|AL356815.1|NCB24H17 Neurospora crassa DNA linkage group II BAC clone B24H17
          Length = 82972

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 429 ttggagtagccgaagccggag 449
           |||||||||||||||||||||
Sbjct: 736 ttggagtagccgaagccggag 756
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>emb|AL355926.1|NCB17C10 Neurospora crassa DNA linkage group II BAC clone B17C10
          Length = 68484

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 429   ttggagtagccgaagccggag 449
             |||||||||||||||||||||
Sbjct: 66703 ttggagtagccgaagccggag 66723
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>emb|AL844895.6| Mouse DNA sequence from clone RP23-359N12 on chromosome 2, complete
              sequence
          Length = 210427

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 291    agaacaatgaacaataaatta 311
              |||||||||||||||||||||
Sbjct: 131571 agaacaatgaacaataaatta 131591
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>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome
          Length = 1796226

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    ctgcaggaaccacgtgatga 144
              ||||||||||||||||||||
Sbjct: 473780 ctgcaggaaccacgtgatga 473761
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>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 454    tggcgaaggtggaggcggag 473
              ||||||||||||||||||||
Sbjct: 579957 tggcgaaggtggaggcggag 579976
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>gb|AC128706.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0063F24,
              complete sequence
          Length = 152738

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    aaagaagatgcagcctgcag 130
              ||||||||||||||||||||
Sbjct: 119893 aaagaagatgcagcctgcag 119874
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>gb|AC134624.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0041I05, complete sequence
          Length = 148785

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   aaagaagatgcagcctgcag 130
             ||||||||||||||||||||
Sbjct: 17068 aaagaagatgcagcctgcag 17049
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>gb|AC121268.7| Mus musculus chromosome 3, clone RP24-468O23, complete sequence
          Length = 176264

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   atcagaacaatgaacaataa 307
             ||||||||||||||||||||
Sbjct: 55825 atcagaacaatgaacaataa 55844
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>ref|XM_838146.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1063)
            partial mRNA
          Length = 5076

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 454  tggcgaaggtggaggcggag 473
            ||||||||||||||||||||
Sbjct: 2639 tggcgaaggtggaggcggag 2658
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>ref|XM_850762.1| PREDICTED: Canis familiaris similar to round spermatid basic
           protein 1, transcript variant 5 (LOC475802), mRNA
          Length = 6536

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 456 gcgaaggtggaggcggaggc 475
           ||||||||||||||||||||
Sbjct: 326 gcgaaggtggaggcggaggc 307
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>ref|XM_850674.1| PREDICTED: Canis familiaris similar to round spermatid basic
           protein 1, transcript variant 3 (LOC475802), mRNA
          Length = 1382

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 456 gcgaaggtggaggcggaggc 475
           ||||||||||||||||||||
Sbjct: 326 gcgaaggtggaggcggaggc 307
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>ref|XM_533011.2| PREDICTED: Canis familiaris similar to round spermatid basic
           protein 1, transcript variant 1 (LOC475802), mRNA
          Length = 6573

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 456 gcgaaggtggaggcggaggc 475
           ||||||||||||||||||||
Sbjct: 481 gcgaaggtggaggcggaggc 462
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>ref|XM_850598.1| PREDICTED: Canis familiaris similar to round spermatid basic
           protein 1, transcript variant 2 (LOC475802), mRNA
          Length = 2254

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 456 gcgaaggtggaggcggaggc 475
           ||||||||||||||||||||
Sbjct: 326 gcgaaggtggaggcggaggc 307
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>gb|AC121816.3| Mus musculus BAC clone RP23-458H21 from chromosome 3, complete sequence
          Length = 173593

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    atcagaacaatgaacaataa 307
              ||||||||||||||||||||
Sbjct: 166274 atcagaacaatgaacaataa 166255
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>gb|AC010799.15| Homo sapiens chromosome 15, clone RP11-40J8, complete sequence
          Length = 179508

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   aagcaaggaacagactccac 380
             ||||||||||||||||||||
Sbjct: 51429 aagcaaggaacagactccac 51448
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>gb|AC147498.14| Medicago truncatula clone mth2-6f18, complete sequence
          Length = 135726

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 59    cctcaaaccaaacacaccttagaagaacgaaa 90
             |||||| |||||||||||||| |||| |||||
Sbjct: 53580 cctcaatccaaacacaccttaaaagatcgaaa 53611
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>gb|AE008825.1| Salmonella typhimurium LT2, section 129 of 220 of the complete genome
          Length = 20502

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 439  cgaagccggagaccatggcgaagg 462
            |||||||||||||||| |||||||
Sbjct: 5192 cgaagccggagaccatcgcgaagg 5215
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>emb|AL445678.2|LMFL7845 Leishmania major Friedlin chromosome 35 cosmid L7845
          Length = 29811

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 454   tggcgaaggtggaggcggag 473
             ||||||||||||||||||||
Sbjct: 11280 tggcgaaggtggaggcggag 11261
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>gb|AC010015.5| Drosophila melanogaster 3L BAC RP98-9C21 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 132655

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   aacatgaaaatcgccacggc 280
             ||||||||||||||||||||
Sbjct: 39188 aacatgaaaatcgccacggc 39207
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>gb|AC010061.6| Drosophila melanogaster 3L BAC RP98-11F16 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 165318

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    aacatgaaaatcgccacggc 280
              ||||||||||||||||||||
Sbjct: 135274 aacatgaaaatcgccacggc 135293
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>tpg|BK002154.1| TPA: TPA_inf: Drosophila melanogaster HDC10274 (HDC10274) gene,
            complete cds
          Length = 1792

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 261  aacatgaaaatcgccacggc 280
            ||||||||||||||||||||
Sbjct: 1753 aacatgaaaatcgccacggc 1772
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>gb|AY039708.1| Chlamydomonas reinhardtii clone UNG, genomic sequence
          Length = 3087

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 460  aggtggaggcggaggcaaag 479
            ||||||||||||||||||||
Sbjct: 1300 aggtggaggcggaggcaaag 1281
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>gb|AC019322.8| Homo sapiens chromosome 15, clone RP11-382B18, complete sequence
          Length = 175205

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 361  aagcaaggaacagactccac 380
            ||||||||||||||||||||
Sbjct: 2397 aagcaaggaacagactccac 2416
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>gb|AC111169.7| Homo sapiens chromosome 15, clone RP11-20D7, complete sequence
          Length = 129543

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 361  aagcaaggaacagactccac 380
            ||||||||||||||||||||
Sbjct: 7270 aagcaaggaacagactccac 7289
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 111      aaagaagatgcagcctgcag 130
                ||||||||||||||||||||
Sbjct: 19611572 aaagaagatgcagcctgcag 19611553
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>gb|AC064874.4| Homo sapiens BAC clone RP11-680O16 from 2, complete sequence
          Length = 160655

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   tcctttttgttccttagagc 346
             ||||||||||||||||||||
Sbjct: 33946 tcctttttgttccttagagc 33965



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   tcctttttgttccttagagc 346
             ||||||||||||||||||||
Sbjct: 32381 tcctttttgttccttagagc 32362
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>gb|AC139426.2| Homo sapiens chromosome 15, clone RP13-395E19, complete sequence
          Length = 188448

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 361    aagcaaggaacagactccac 380
              ||||||||||||||||||||
Sbjct: 175580 aagcaaggaacagactccac 175599
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>gb|AC135731.6| Homo sapiens chromosome 15, clone RP11-261B23, complete sequence
          Length = 123089

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   aagcaaggaacagactccac 380
             ||||||||||||||||||||
Sbjct: 17631 aagcaaggaacagactccac 17612
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>gb|AC021413.16| Homo sapiens chromosome 15, clone RP11-30N16, complete sequence
          Length = 199198

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    aagcaaggaacagactccac 380
              ||||||||||||||||||||
Sbjct: 100387 aagcaaggaacagactccac 100368
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>gb|AC018755.3|AC018755 Homo sapiens chromosome 19, BAC BC330783 (CIT-HSPC_470E3), complete
              sequence
          Length = 229155

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     atgacattccatcacttttg 56
              ||||||||||||||||||||
Sbjct: 106801 atgacattccatcacttttg 106820
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>emb|BX649578.14| Zebrafish DNA sequence from clone CH211-196L7 in linkage group 18,
              complete sequence
          Length = 211922

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 248    acaggctgctgagaacatga 267
              ||||||||||||||||||||
Sbjct: 208785 acaggctgctgagaacatga 208804
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>gb|AE003531.3| Drosophila melanogaster chromosome 3L, section 54 of 83 of the complete
              sequence
          Length = 271869

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    aacatgaaaatcgccacggc 280
              ||||||||||||||||||||
Sbjct: 243725 aacatgaaaatcgccacggc 243744
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>gb|AC167016.5| Mus musculus chromosome 3, clone RP23-76C12, complete sequence
          Length = 225524

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   aatcagaacaatgaacaata 306
             ||||||||||||||||||||
Sbjct: 62704 aatcagaacaatgaacaata 62723
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 443    gccggagaccatggcgaagg 462
              ||||||||||||||||||||
Sbjct: 840231 gccggagaccatggcgaagg 840250
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 111      aaagaagatgcagcctgcag 130
                ||||||||||||||||||||
Sbjct: 19897431 aaagaagatgcagcctgcag 19897412
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>dbj|AP004526.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT05E07, TM0055,
             complete sequence
          Length = 94516

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   aaagaagatgcagcctgcag 130
             ||||||||||||||||||||
Sbjct: 14544 aaagaagatgcagcctgcag 14525
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>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome
          Length = 1796846

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    ctgcaggaaccacgtgatga 144
              ||||||||||||||||||||
Sbjct: 478591 ctgcaggaaccacgtgatga 478572
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>emb|AL607041.18| Mouse DNA sequence from clone RP23-434K11 on chromosome 11, complete
              sequence
          Length = 198761

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    atatccttacaagcaaggaa 370
              ||||||||||||||||||||
Sbjct: 198497 atatccttacaagcaaggaa 198516
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>emb|AL935172.8| Mouse DNA sequence from clone RP23-261J24 on chromosome 11, complete
            sequence
          Length = 142614

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  atatccttacaagcaaggaa 370
            ||||||||||||||||||||
Sbjct: 1736 atatccttacaagcaaggaa 1755


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,803,715
Number of Sequences: 3902068
Number of extensions: 4803715
Number of successful extensions: 97002
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96739
Number of HSP's gapped (non-prelim): 263
length of query: 526
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 503
effective length of database: 17,143,297,704
effective search space: 8623078745112
effective search space used: 8623078745112
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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