| Clone Name | rbags27f21 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK060649.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H01, full insert sequence Length = 1377 Score = 208 bits (105), Expect = 1e-50 Identities = 247/291 (84%), Gaps = 10/291 (3%) Strand = Plus / Minus Query: 148 gagcacctccggcctccttttaactcctcgcactgtcaccgcgcc--ttcagctgcaccc 205 |||||||| |||||||| |||| ||||||||||||| ||| ||| |||| ||||| || Sbjct: 1123 gagcacctttggcctcctcttaattcctcgcactgtcgccgtgccccttcaactgcatcc 1064 Query: 206 ggccacctgctccactttgggaggcagcatgactgtgggcttggagatgatggcgggcac 265 | ||||||||||||||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 1063 cgtcacctgctccactttgggaggggccatgacggtgggcttggagatgatggcgggcac 1004 Query: 266 ggtgggcacggcggcgg--agaccggcgggaagtagtgcgcggccgggacgcccagcccc 323 ||||| ||||| |||| ||||||||||||| |||| ||||| ||||||||||| ||| Sbjct: 1003 ggtggtgacggctgcggccggaccggcgggaagaagtgggcggcggggacgcccaggccc 944 Query: 324 tgcgaggcgtggtagtggtggtagtgatagtaggggtacacgggcatcatgccgttgggc 383 |||| | | ||||| |||||| || ||||| ||||||||||| ||||| ||||| | | Sbjct: 943 tgcgcgccatggta---gtggtactggtagtacgggtacacgggtatcatcccgttcgcc 887 Query: 384 gccagcatgcctccctgcgccgccgccgccgggtacgagaagtgaccctgc 434 || |||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 886 gcgagcatgcctccctg---cgccgccgccgggtacgagaagtgcccctgc 839
>ref|XM_470664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1020 Score = 196 bits (99), Expect = 5e-47 Identities = 198/229 (86%), Gaps = 9/229 (3%) Strand = Plus / Minus Query: 209 cacctgctccactttgggaggcagcatgactgtgggcttggagatgatggcgggcacggt 268 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 1005 cacctgctccactttgggaggggccatgacggtgggcttggagatgatggcgggcacggt 946 Query: 269 gggcacg---gcggcggagaccggcgggaagtagtgcgcggccgggacgcccagcccctg 325 || ||| ||||| ||||||||||||||| |||| ||||| ||||||||||| ||||| Sbjct: 945 ggtgacggctgcggccgagaccggcgggaagaagtgggcggcggggacgcccaggccctg 886 Query: 326 cgaggcgtggtagtggtggtagtgatagtaggggtacacgggcatcatgccgttgggcgc 385 || | | ||||| |||||| || ||||| ||||||||||||||||| ||||| | ||| Sbjct: 885 cgcgccatggta---gtggtactggtagtacgggtacacgggcatcatcccgttcgccgc 829 Query: 386 cagcatgcctccctgcgccgccgccgccgggtacgagaagtgaccctgc 434 |||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 828 gagcatgcctccctg---cgccgccgccgggtacgagaagtgcccctgc 783
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 174 bits (88), Expect = 2e-40 Identities = 187/218 (85%), Gaps = 9/218 (4%) Strand = Plus / Plus Query: 220 ctttgggaggcagcatgactgtgggcttggagatgatggcgggcacggtgggcacggcgg 279 |||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| | Sbjct: 9850821 ctttgggaggggccatgacggtgggcttggagatgatggcgggcacggtggtgacggctg 9850880 Query: 280 cgg---agaccggcgggaagtagtgcgcggccgggacgcccagcccctgcgaggcgtggt 336 ||| |||||||||||||| |||| ||||| ||||||||||| ||||||| | | |||| Sbjct: 9850881 cggccgagaccggcgggaagaagtgggcggcggggacgcccaggccctgcgcgccatggt 9850940 Query: 337 agtggtggtagtgatagtaggggtacacgggcatcatgccgttgggcgccagcatgcctc 396 |||||| | || ||||| ||||||||||||||||| ||||| | ||| |||||||||| Sbjct: 9850941 agtggt---actggtagtacgggtacacgggcatcatcccgttcgccgcgagcatgcctc 9850997 Query: 397 cctgcgccgccgccgccgggtacgagaagtgaccctgc 434 |||| |||||||||||||||||||||||| |||||| Sbjct: 9850998 cctg---cgccgccgccgggtacgagaagtgcccctgc 9851032 Score = 50.1 bits (25), Expect = 0.007 Identities = 64/76 (84%), Gaps = 2/76 (2%) Strand = Plus / Plus Query: 148 gagcacctccggcctccttttaactcctcgcactgtcacc--gcgccttcagctgcaccc 205 |||||||| |||||||| |||| ||||||||||||| || || |||||| ||||| || Sbjct: 9850345 gagcacctttggcctcctcttaattcctcgcactgtcgccgtgccccttcaactgcatcc 9850404 Query: 206 ggccacctgctccact 221 | ||||||||||||| Sbjct: 9850405 cgtcacctgctccact 9850420 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 gcgggcacggtgggcacggcgg 279 |||||||||||||||||||||| Sbjct: 32124419 gcgggcacggtgggcacggcgg 32124398
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 174 bits (88), Expect = 2e-40 Identities = 187/218 (85%), Gaps = 9/218 (4%) Strand = Plus / Plus Query: 220 ctttgggaggcagcatgactgtgggcttggagatgatggcgggcacggtgggcacggcgg 279 |||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| | Sbjct: 9848942 ctttgggaggggccatgacggtgggcttggagatgatggcgggcacggtggtgacggctg 9849001 Query: 280 cgg---agaccggcgggaagtagtgcgcggccgggacgcccagcccctgcgaggcgtggt 336 ||| |||||||||||||| |||| ||||| ||||||||||| ||||||| | | |||| Sbjct: 9849002 cggccgagaccggcgggaagaagtgggcggcggggacgcccaggccctgcgcgccatggt 9849061 Query: 337 agtggtggtagtgatagtaggggtacacgggcatcatgccgttgggcgccagcatgcctc 396 |||||| | || ||||| ||||||||||||||||| ||||| | ||| |||||||||| Sbjct: 9849062 agtggt---actggtagtacgggtacacgggcatcatcccgttcgccgcgagcatgcctc 9849118 Query: 397 cctgcgccgccgccgccgggtacgagaagtgaccctgc 434 |||| |||||||||||||||||||||||| |||||| Sbjct: 9849119 cctg---cgccgccgccgggtacgagaagtgcccctgc 9849153 Score = 50.1 bits (25), Expect = 0.007 Identities = 64/76 (84%), Gaps = 2/76 (2%) Strand = Plus / Plus Query: 148 gagcacctccggcctccttttaactcctcgcactgtcacc--gcgccttcagctgcaccc 205 |||||||| |||||||| |||| ||||||||||||| || || |||||| ||||| || Sbjct: 9848466 gagcacctttggcctcctcttaattcctcgcactgtcgccgtgccccttcaactgcatcc 9848525 Query: 206 ggccacctgctccact 221 | ||||||||||||| Sbjct: 9848526 cgtcacctgctccact 9848541 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 gcgggcacggtgggcacggcgg 279 |||||||||||||||||||||| Sbjct: 32214931 gcgggcacggtgggcacggcgg 32214910
>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0022M22, from chromosome 3, complete sequence Length = 124166 Score = 174 bits (88), Expect = 2e-40 Identities = 187/218 (85%), Gaps = 9/218 (4%) Strand = Plus / Plus Query: 220 ctttgggaggcagcatgactgtgggcttggagatgatggcgggcacggtgggcacggcgg 279 |||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| | Sbjct: 13210 ctttgggaggggccatgacggtgggcttggagatgatggcgggcacggtggtgacggctg 13269 Query: 280 cgg---agaccggcgggaagtagtgcgcggccgggacgcccagcccctgcgaggcgtggt 336 ||| |||||||||||||| |||| ||||| ||||||||||| ||||||| | | |||| Sbjct: 13270 cggccgagaccggcgggaagaagtgggcggcggggacgcccaggccctgcgcgccatggt 13329 Query: 337 agtggtggtagtgatagtaggggtacacgggcatcatgccgttgggcgccagcatgcctc 396 |||||| | || ||||| ||||||||||||||||| ||||| | ||| |||||||||| Sbjct: 13330 agtggt---actggtagtacgggtacacgggcatcatcccgttcgccgcgagcatgcctc 13386 Query: 397 cctgcgccgccgccgccgggtacgagaagtgaccctgc 434 |||| |||||||||||||||||||||||| |||||| Sbjct: 13387 cctg---cgccgccgccgggtacgagaagtgcccctgc 13421 Score = 50.1 bits (25), Expect = 0.007 Identities = 64/76 (84%), Gaps = 2/76 (2%) Strand = Plus / Plus Query: 148 gagcacctccggcctccttttaactcctcgcactgtcacc--gcgccttcagctgcaccc 205 |||||||| |||||||| |||| ||||||||||||| || || |||||| ||||| || Sbjct: 12734 gagcacctttggcctcctcttaattcctcgcactgtcgccgtgccccttcaactgcatcc 12793 Query: 206 ggccacctgctccact 221 | ||||||||||||| Sbjct: 12794 cgtcacctgctccact 12809
>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0013D02, complete sequence Length = 131883 Score = 174 bits (88), Expect = 2e-40 Identities = 187/218 (85%), Gaps = 9/218 (4%) Strand = Plus / Minus Query: 220 ctttgggaggcagcatgactgtgggcttggagatgatggcgggcacggtgggcacggcgg 279 |||||||||| |||||| ||||||||||||||||||||||||||||||| ||||| | Sbjct: 23676 ctttgggaggggccatgacggtgggcttggagatgatggcgggcacggtggtgacggctg 23617 Query: 280 cgg---agaccggcgggaagtagtgcgcggccgggacgcccagcccctgcgaggcgtggt 336 ||| |||||||||||||| |||| ||||| ||||||||||| ||||||| | | |||| Sbjct: 23616 cggccgagaccggcgggaagaagtgggcggcggggacgcccaggccctgcgcgccatggt 23557 Query: 337 agtggtggtagtgatagtaggggtacacgggcatcatgccgttgggcgccagcatgcctc 396 |||||| | || ||||| ||||||||||||||||| ||||| | ||| |||||||||| Sbjct: 23556 agtggt---actggtagtacgggtacacgggcatcatcccgttcgccgcgagcatgcctc 23500 Query: 397 cctgcgccgccgccgccgggtacgagaagtgaccctgc 434 ||||||| ||||||||||||||||||||| |||||| Sbjct: 23499 cctgcgc---cgccgccgggtacgagaagtgcccctgc 23465 Score = 50.1 bits (25), Expect = 0.007 Identities = 64/76 (84%), Gaps = 2/76 (2%) Strand = Plus / Minus Query: 148 gagcacctccggcctccttttaactcctcgcactgtcacc--gcgccttcagctgcaccc 205 |||||||| |||||||| |||| ||||||||||||| || || |||||| ||||| || Sbjct: 24152 gagcacctttggcctcctcttaattcctcgcactgtcgccgtgccccttcaactgcatcc 24093 Query: 206 ggccacctgctccact 221 | ||||||||||||| Sbjct: 24092 cgtcacctgctccact 24077
>gb|BT016733.1| Zea mays clone Contig566 mRNA sequence Length = 1342 Score = 127 bits (64), Expect = 4e-26 Identities = 207/254 (81%), Gaps = 18/254 (7%) Strand = Plus / Minus Query: 190 gccttcagctgcacccggccacctgctccactttgggaggcagcatgactgtgggcttgg 249 ||||||||||||| || | |||||||||||||||||||| |||||| ||| ||||| Sbjct: 967 gccttcagctgcagcctgtcacctgctccactttgggagcggccatgacggtgttcttgg 908 Query: 250 agatgatggcgggcacggtgggcacggcggcggagaccggcgggaagtagtgcgcggccg 309 || || |||||| |||| |||||||||||||||| |||||| |||||||||| | Sbjct: 907 ggacgacggcggggacgg------cggcggcggagaccggggggaagaagtgcgcggcgg 854 Query: 310 ggacgcccagcccctgcgaggcgtggtagtggtggtagtgatagtaggggtacacgggca 369 ||| ||| ||||||||||||||||| ||||||||||| ||| | |||||||| |||| Sbjct: 853 cgactccc---ccctgcgaggcgtggtactggtggtagtggtagaacgggtacaccggca 797 Query: 370 tcatgccgttggg------cgccagcatgcctccctgc---gccgccgccgccgggtacg 420 |||||||||||| ||||| |||||| |||||| ||||||||||||||||||| Sbjct: 796 ccatgccgttgggcgccgccgccaccatgccgccctgcgctgccgccgccgccgggtacg 737 Query: 421 agaagtgaccctgc 434 |||||| |||||| Sbjct: 736 cgaagtgcccctgc 723
>ref|XM_360166.1| Magnaporthe grisea 70-15 hypothetical protein (MG05540.4) partial mRNA Length = 2154 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 396 ccctgcgccgccgccgccgggta 418 ||||||||||||||||||||||| Sbjct: 1910 ccctgcgccgccgccgccgggta 1888
>gb|AC123046.4| Mus musculus BAC clone RP24-447I18 from chromosome 5, complete sequence Length = 146874 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 332 gtggtagtggtggtagtgatagt 354 ||||||||||||||||||||||| Sbjct: 59962 gtggtagtggtggtagtgatagt 59984
>ref|XM_632562.1| Dictyostelium discoideum hypothetical protein (DDB0218862), partial mRNA Length = 2088 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 333 tggtagtggtggtagtgatagt 354 |||||||||||||||||||||| Sbjct: 1908 tggtagtggtggtagtgatagt 1929
>gb|AC123837.5| Mus musculus BAC clone RP23-385F8 from chromosome 7, complete sequence Length = 208880 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 332 gtggtagtggtggtagtgatagtaggggta 361 |||||||||||||||||| |||||| |||| Sbjct: 77437 gtggtagtggtggtagtggtagtagtggta 77466
>emb|X80670.1|LJNIA L.japonicus NIA gene Length = 5499 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 329 ggcgtggtagtggtggtagtga 350 |||||||||||||||||||||| Sbjct: 4232 ggcgtggtagtggtggtagtga 4211
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 257 ggcgggcacggtgggcacggcggcgg 282 ||||||||||| |||||||||||||| Sbjct: 139992 ggcgggcacggcgggcacggcggcgg 139967
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete sequence Length = 178158 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 258 gcgggcacggtgggcacggcgg 279 |||||||||||||||||||||| Sbjct: 125544 gcgggcacggtgggcacggcgg 125523
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 255 atggcgggcacggtgggcacgg 276 |||||||||||||||||||||| Sbjct: 4403836 atggcgggcacggtgggcacgg 4403815
>gb|AC151986.4| Mus musculus BAC clone RP23-365E22 from chromosome 7, complete sequence Length = 199337 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Minus Query: 332 gtggtagtggtggtagtgatagtaggggta 361 |||||||||||||||||| |||||| |||| Sbjct: 60654 gtggtagtggtggtagtggtagtagtggta 60625
>gb|AC160408.6| Mus musculus 10 BAC RP23-116I16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210970 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 333 tggtagtggtggtagtgatagt 354 |||||||||||||||||||||| Sbjct: 154736 tggtagtggtggtagtgatagt 154757
>gb|AC008124.8|AC008124 Homo sapiens Chromosome 12q13-62.7-72 BAC RPCI11-352M15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183387 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 393 cctccctgcgccgccgccgccg 414 |||||||||||||||||||||| Sbjct: 32115 cctccctgcgccgccgccgccg 32094
>gb|AC133578.12| Mus musculus chromosome 15, clone RP23-212I23, complete sequence Length = 235230 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 393 cctccctgcgccgccgccgccg 414 |||||||||||||||||||||| Sbjct: 130925 cctccctgcgccgccgccgccg 130904
>ref|XM_640675.1| Dictyostelium discoideum hypothetical protein (DDB0202739), partial mRNA Length = 2679 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 332 gtggtagtggtggtagtgatagtag 356 ||||||||| ||||||||||||||| Sbjct: 1730 gtggtagtgatggtagtgatagtag 1754
>ref|XM_635382.1| Dictyostelium discoideum hypothetical protein (DDB0204263), partial mRNA Length = 2064 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 gtagtggtggtagtgatagta 355 ||||||||||||||||||||| Sbjct: 1634 gtagtggtggtagtgatagta 1654
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 390 atgcctccctgcgccgccgcc 410 ||||||||||||||||||||| Sbjct: 1063208 atgcctccctgcgccgccgcc 1063188
>gb|DQ216582.1| Taeniopygia guttata clone 0058P0041C09 malate dehydrogenase mitochondrial-like mRNA, complete sequence Length = 1294 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 255 atggcgggcacggtgggcacggcgg 279 ||||||||||||| ||||||||||| Sbjct: 90 atggcgggcacggcgggcacggcgg 66
>gb|DQ216580.1| Taeniopygia guttata clone 0058P0051G04 malate dehydrogenase mitochondrial-like mRNA, complete sequence Length = 1289 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 255 atggcgggcacggtgggcacggcgg 279 ||||||||||||| ||||||||||| Sbjct: 85 atggcgggcacggcgggcacggcgg 61
>gb|DQ216577.1| Taeniopygia guttata clone 0063P0023A06 malate dehydrogenase mitochondrial-like mRNA, complete sequence Length = 1291 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 255 atggcgggcacggtgggcacggcgg 279 ||||||||||||| ||||||||||| Sbjct: 90 atggcgggcacggcgggcacggcgg 66
>gb|DQ216576.1| Taeniopygia guttata clone 0063P0017D08 malate dehydrogenase mitochondrial-like mRNA, complete sequence Length = 1319 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 255 atggcgggcacggtgggcacggcgg 279 ||||||||||||| ||||||||||| Sbjct: 119 atggcgggcacggcgggcacggcgg 95
>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence Length = 1207381 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 278 ggcggagaccggcgggaagta 298 ||||||||||||||||||||| Sbjct: 36010 ggcggagaccggcgggaagta 35990
>gb|AF017145.1| Homo sapiens multidrug resistance protein (MRP) gene, 5' flanking sequence Length = 1023 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 ctccctgcgccgccgccgccg 414 ||||||||||||||||||||| Sbjct: 853 ctccctgcgccgccgccgccg 873
>gb|AC132458.3| Mus musculus BAC clone RP23-152C8 from chromosome 5, complete sequence Length = 219470 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 cttgttataatcagaaagaca 139 ||||||||||||||||||||| Sbjct: 32113 cttgttataatcagaaagaca 32093
>gb|AC134331.2| Mus musculus BAC clone RP24-344O12 from chromosome 19, complete sequence Length = 155342 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 332 gtggtagtggtggtagtgatagtag 356 |||||||||||||||||| |||||| Sbjct: 67459 gtggtagtggtggtagtggtagtag 67483
>gb|AC107736.10| Mus musculus chromosome 7, clone RP23-354B2, complete sequence Length = 272413 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 332 gtggtagtggtggtagtgata 352 ||||||||||||||||||||| Sbjct: 32925 gtggtagtggtggtagtgata 32905
>ref|NM_004996.2| Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 1 (ABCC1), transcript variant 1, mRNA Length = 5927 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 ctccctgcgccgccgccgccg 414 ||||||||||||||||||||| Sbjct: 29 ctccctgcgccgccgccgccg 49
>ref|NM_019862.1| Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 1 (ABCC1), transcript variant 2, mRNA Length = 5749 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 ctccctgcgccgccgccgccg 414 ||||||||||||||||||||| Sbjct: 29 ctccctgcgccgccgccgccg 49
>ref|NM_019899.1| Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 1 (ABCC1), transcript variant 4, mRNA Length = 5582 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 ctccctgcgccgccgccgccg 414 ||||||||||||||||||||| Sbjct: 29 ctccctgcgccgccgccgccg 49
>ref|NM_019901.1| Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 1 (ABCC1), transcript variant 6, mRNA Length = 5801 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 ctccctgcgccgccgccgccg 414 ||||||||||||||||||||| Sbjct: 29 ctccctgcgccgccgccgccg 49
>ref|NM_019898.1| Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 1 (ABCC1), transcript variant 3, mRNA Length = 5759 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 ctccctgcgccgccgccgccg 414 ||||||||||||||||||||| Sbjct: 29 ctccctgcgccgccgccgccg 49
>ref|NM_019900.1| Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 1 (ABCC1), transcript variant 5, mRNA Length = 5732 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 ctccctgcgccgccgccgccg 414 ||||||||||||||||||||| Sbjct: 29 ctccctgcgccgccgccgccg 49
>ref|NM_019902.1| Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 1 (ABCC1), transcript variant 7, mRNA Length = 5780 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 ctccctgcgccgccgccgccg 414 ||||||||||||||||||||| Sbjct: 29 ctccctgcgccgccgccgccg 49
>gb|AC130651.2| Homo sapiens chromosome 16 clone CTA-972D3, complete sequence Length = 168190 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 ctccctgcgccgccgccgccg 414 ||||||||||||||||||||| Sbjct: 116884 ctccctgcgccgccgccgccg 116904
>gb|AC016588.9| Homo sapiens chromosome 19 clone CTD-3113P16, complete sequence Length = 144578 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 ctgcacccggccacctgctcc 218 ||||||||||||||||||||| Sbjct: 123726 ctgcacccggccacctgctcc 123746
>emb|BX322647.12| Zebrafish DNA sequence from clone DKEYP-86F8 in linkage group 1, complete sequence Length = 216540 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 195 cagctgcacccggccacctgctccacttt 223 ||||| ||||||||||||| ||||||||| Sbjct: 34174 cagctccacccggccaccttctccacttt 34146
>ref|XM_683118.1| PREDICTED: Danio rerio similar to transmembrane protein 16E (LOC559751), mRNA Length = 5337 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 195 cagctgcacccggccacctgctccacttt 223 ||||| ||||||||||||| ||||||||| Sbjct: 2761 cagctccacccggccaccttctccacttt 2789
>ref|XM_685275.1| PREDICTED: Danio rerio similar to adlican (LOC561875), mRNA Length = 6018 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 195 cagctgcacccggccacctgctccacttt 223 ||||| ||||||||||||| ||||||||| Sbjct: 484 cagctccacccggccaccttctccacttt 512
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 gcagcatgactgtgggcttgg 249 ||||||||||||||||||||| Sbjct: 437017 gcagcatgactgtgggcttgg 436997
>gb|AE009644.1| Brucella melitensis 16M chromosome II, section 6 of 107 of the complete sequence Length = 9353 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 278 ggcggagaccggcgggaagta 298 ||||||||||||||||||||| Sbjct: 512 ggcggagaccggcgggaagta 532
>gb|AF312012.1|AF312012 Phyllosticta abietis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 643 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 gggcccgcccgcgccaggcgc 466 ||||||||||||||||||||| Sbjct: 493 gggcccgcccgcgccaggcgc 473
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 gcacggtgggcacggcggcgg 282 ||||||||||||||||||||| Sbjct: 8122137 gcacggtgggcacggcggcgg 8122157
>gb|AF263011.1|AF263011S1 Streptomyces griseus subsp. griseus macrotetrolide biosynthesis gene cluster, upstream region Length = 15833 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 403 ccgccgccgccgggtacgagaagtg 427 ||||||||||| ||||||||||||| Sbjct: 10071 ccgccgccgcctggtacgagaagtg 10095
>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence Length = 1162204 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 278 ggcggagaccggcgggaagta 298 ||||||||||||||||||||| Sbjct: 35812 ggcggagaccggcgggaagta 35792
>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence, strain 2308 Length = 1156948 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 278 ggcggagaccggcgggaagta 298 ||||||||||||||||||||| Sbjct: 35861 ggcggagaccggcgggaagta 35841
>gb|L05628.1|HUMMRPX Human multidrug resistance-associated protein (MRP) mRNA, complete cds Length = 5011 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 ctccctgcgccgccgccgccg 414 ||||||||||||||||||||| Sbjct: 29 ctccctgcgccgccgccgccg 49
>gb|U07050.1|HSU07050 Human (MRP) gene, 5' regulatory region Length = 2228 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 ctccctgcgccgccgccgccg 414 ||||||||||||||||||||| Sbjct: 2059 ctccctgcgccgccgccgccg 2079
>ref|XM_635272.1| Dictyostelium discoideum hypothetical protein (DDB0205144), partial mRNA Length = 7872 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 gtggtagtggtggtagtgatagta 355 ||||| |||||||||||||||||| Sbjct: 1163 gtggtggtggtggtagtgatagta 1186
>ref|XM_635224.1| Dictyostelium discoideum hypothetical protein (DDB0205303), partial mRNA Length = 2625 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 gtggtagtggtggtagtgatagta 355 |||||||||||||||||| ||||| Sbjct: 2198 gtggtagtggtggtagtggtagta 2221
>ref|XM_634019.1| Dictyostelium discoideum hypothetical protein (DDB0185466), partial mRNA Length = 3057 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 962 gtggtagtggtggtagtgat 981
>ref|XM_521581.1| PREDICTED: Pan troglodytes similar to Homeobox protein Nkx-2.3 (Homeobox protein NKX-2.3) (Homeobox protein NK-2 homolog C) (LOC466179), mRNA Length = 1317 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 cgccgccgccgccgggtacg 420 |||||||||||||||||||| Sbjct: 1126 cgccgccgccgccgggtacg 1107
>ref|XM_478255.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1347 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 393 cctccctgcgccgccgccgccggg 416 ||||||| |||||||||||||||| Sbjct: 276 cctcccttcgccgccgccgccggg 253
>gb|BT017858.1| Zea mays clone EL01N0511D08.c mRNA sequence Length = 1204 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 396 ccctgcgccgccgccgccgggtac 419 |||||||||||||||| ||||||| Sbjct: 152 ccctgcgccgccgccggcgggtac 175
>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete sequence Length = 787999 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 actttgggaggcagcatgac 238 |||||||||||||||||||| Sbjct: 715116 actttgggaggcagcatgac 715135
>gb|AC005222.1| Homo sapiens chromosome 16, cosmid clone RT163 (LANL), complete sequence Length = 40619 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 ctccctgcgccgccgccgcc 413 |||||||||||||||||||| Sbjct: 13351 ctccctgcgccgccgccgcc 13370
>gb|AC135569.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018F17, complete sequence Length = 104291 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 ggcggcggagaccggcggga 294 |||||||||||||||||||| Sbjct: 74772 ggcggcggagaccggcggga 74791
>gb|AC117657.11| Mus musculus chromosome 15, clone RP23-299O23, complete sequence Length = 198005 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 183460 gtggtagtggtggtagtgat 183479
>gb|AC119951.12| Mus musculus chromosome 9, clone RP24-448C4, complete sequence Length = 215131 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 337 agtggtggtagtgatagtaggggt 360 ||||| |||||||||||||||||| Sbjct: 144387 agtggaggtagtgatagtaggggt 144410
>ref|XM_361297.1| Magnaporthe grisea 70-15 hypothetical protein (MG03771.4) partial mRNA Length = 1650 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 tgccgttgggcgccagcatg 392 |||||||||||||||||||| Sbjct: 985 tgccgttgggcgccagcatg 966
>ref|XM_423069.1| PREDICTED: Gallus gallus similar to phosphatidylinositol 4-kinase type II (LOC425291), mRNA Length = 1420 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 cctgcgccgccgccgccggg 416 |||||||||||||||||||| Sbjct: 215 cctgcgccgccgccgccggg 196
>ref|XM_956288.1| Neurospora crassa OR74A hypothetical protein (NCU01295.1) partial mRNA Length = 2520 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 tccctgcgccgccgccgccg 414 |||||||||||||||||||| Sbjct: 249 tccctgcgccgccgccgccg 268
>ref|XM_326787.1| Neurospora crassa OR74A hypothetical protein (NCU01295.1) partial mRNA Length = 2520 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 tccctgcgccgccgccgccg 414 |||||||||||||||||||| Sbjct: 249 tccctgcgccgccgccgccg 268
>gb|AC108844.8| Mus musculus chromosome 8, clone RP23-383L20, complete sequence Length = 194316 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 tggtagtggtggtagtgatagtag 356 |||| ||||||||||||||||||| Sbjct: 52017 tggtggtggtggtagtgatagtag 51994
>gb|AC122541.3| Mus musculus BAC clone RP24-567D4 from chromosome 5, complete sequence Length = 166883 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 69683 gtggtagtggtggtagtgat 69702
>gb|AC107741.15| Mus musculus chromosome 3, clone RP23-335P23, complete sequence Length = 212995 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 tggtagtggtggtagtgatagtag 356 ||||||||||||||||| |||||| Sbjct: 70928 tggtagtggtggtagtggtagtag 70905
>ref|XM_568434.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNM02360) partial mRNA Length = 1736 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 actttgggaggcagcatgac 238 |||||||||||||||||||| Sbjct: 1512 actttgggaggcagcatgac 1493
>gb|AC079316.15| Homo sapiens 12 BAC RP11-43D4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178905 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 51420 gtggtagtggtggtagtgat 51439
>gb|AC118022.12| Mus musculus chromosome 15, clone RP23-459I23, complete sequence Length = 190653 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 1070 gtggtagtggtggtagtgat 1089
>gb|AC146310.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1082A06, complete sequence Length = 135774 Score = 40.1 bits (20), Expect = 6.7 Identities = 25/27 (92%) Strand = Plus / Plus Query: 449 cccgcccgcgccaggcgccgctgncgc 475 ||||||||||||| ||||||||| ||| Sbjct: 42114 cccgcccgcgccaagcgccgctgccgc 42140
>gb|AY358299.1| Homo sapiens clone DNA45495 CSRV314 (UNQ314) mRNA, complete cds Length = 2768 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 ctccctgcgccgccgccgcc 413 |||||||||||||||||||| Sbjct: 86 ctccctgcgccgccgccgcc 105
>gb|AY358298.1| Homo sapiens clone DNA44804 CSRV314 (UNQ314) mRNA, complete cds Length = 2555 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 ctccctgcgccgccgccgcc 413 |||||||||||||||||||| Sbjct: 103 ctccctgcgccgccgccgcc 122
>emb|CR657744.2|CNS0F6HI Tetraodon nigroviridis full-length cDNA Length = 943 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 ctccctgcgccgccgccgcc 413 |||||||||||||||||||| Sbjct: 390 ctccctgcgccgccgccgcc 371
>gb|BC068575.1| Homo sapiens vasorin, mRNA (cDNA clone MGC:87552 IMAGE:30349094), complete cds Length = 2819 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 ctccctgcgccgccgccgcc 413 |||||||||||||||||||| Sbjct: 122 ctccctgcgccgccgccgcc 141
>emb|AL451123.12| Human DNA sequence from clone RP11-27J8 on chromosome 9 Contains the gene for interferon kappa precursor (IFNK), the 5' UTR of a novel gene (FLJ13204), a novel gene, includes FLJ25077 and FLJ11109 (MGC23980) and 2 CpG islands, complete sequence Length = 140827 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 tccctgcgccgccgccgccg 414 |||||||||||||||||||| Sbjct: 113761 tccctgcgccgccgccgccg 113780
>emb|AL357552.25| Human DNA sequence from clone RP4-633I8 on chromosome 1p36.21-36.32 Contains the 5' end of the RERE gene for arginine-glutamic acid dipeptide (RE) repeats (FLJ38775), two ribosomal protein L7 (RPL7) pseudogenes, a ribosomal protein L27 (RPL27) pseudogene, a novel gene and a CpG island, complete sequence Length = 143969 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 ttataatcagaaagacagat 142 |||||||||||||||||||| Sbjct: 68548 ttataatcagaaagacagat 68529
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 agtgcgcggccgggacgccc 317 |||||||||||||||||||| Sbjct: 635047 agtgcgcggccgggacgccc 635028
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 aggcggcaaggctggctagaccac 68 ||||||||||||||||||| |||| Sbjct: 1091374 aggcggcaaggctggctaggccac 1091397
>ref|NM_138440.2| Homo sapiens vasorin (VASN), mRNA Length = 2864 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 ctccctgcgccgccgccgcc 413 |||||||||||||||||||| Sbjct: 122 ctccctgcgccgccgccgcc 141
>emb|BX294016.1|NCB9K17 Neurospora crassa DNA linkage group V BAC clone B9K17 Length = 71774 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tccctgcgccgccgccgccg 414 |||||||||||||||||||| Sbjct: 50336 tccctgcgccgccgccgccg 50317
>emb|AL645783.13| Mouse DNA sequence from clone RP23-459H16 on chromosome 13 Contains the Foxc1 gene for forkhead box C1, a novel gene, the 3' end of the Gmds gene forGDP-mannose 4,6-dehydratase and two CpG islands, complete sequence Length = 98685 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 tggtagtggtggtagtgatagtag 356 ||||||||||||||||| |||||| Sbjct: 1668 tggtagtggtggtagtggtagtag 1645
>emb|AL021728.1|DMC95B7 Drosophila melanogaster cosmid clone 95B7 Length = 45857 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 16602 gtggtagtggtggtagtgat 16621
>emb|AL590625.16| Mouse DNA sequence from clone RP23-467M8 on chromosome 13 Contains the Foxf2 gene for forkhead box F2, a novel gene and two CpG islands, complete sequence Length = 165745 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 tggtagtggtggtagtgatagtag 356 ||||||||||||||||| |||||| Sbjct: 165413 tggtagtggtggtagtggtagtag 165390
>gb|AC104008.4| Homo sapiens chromosome 8, clone RP11-192I2, complete sequence Length = 129898 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 140 gtggtagtggtggtagtgat 121
>gb|AC113280.12| Mus musculus chromosome 1, clone RP23-391E12, complete sequence Length = 217982 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 gtggtagtggtggtagtgatagta 355 ||||||||||||||||| |||||| Sbjct: 88378 gtggtagtggtggtagtcatagta 88355
>gb|AC104145.7| Drosophila melanogaster X BAC RP98-30B1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 161569 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 71476 gtggtagtggtggtagtgat 71495
>emb|CR625381.1| full-length cDNA clone CS0DI016YH15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2671 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 ctccctgcgccgccgccgcc 413 |||||||||||||||||||| Sbjct: 118 ctccctgcgccgccgccgcc 137
>ref|NM_130671.2| Drosophila melanogaster CG2713-RA (CG2713), mRNA Length = 1721 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 257 gtggtagtggtggtagtgat 238
>gb|AC012676.5| Homo sapiens chromosome 16 clone RP11-295D4, complete sequence Length = 172071 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 ctccctgcgccgccgccgcc 413 |||||||||||||||||||| Sbjct: 72337 ctccctgcgccgccgccgcc 72356
>gb|AY070535.1| Drosophila melanogaster LD05179 full length cDNA Length = 1727 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 238 gtggtagtggtggtagtgat 219
>gb|AC026724.3| Homo sapiens chromosome 5 clone CTD-2229I16, complete sequence Length = 156254 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 3117 gtggtagtggtggtagtgat 3098
>gb|AC006549.28| Homo sapiens chromosome 22 clone p215k21 map 22q11, complete sequence Length = 174840 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 43156 gtggtagtggtggtagtgat 43137 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 42527 gtggtagtggtggtagtgat 42508
>gb|AC000097.1| Homo sapiens Chromosome 22q11.2 PAC Clone p201m18 In DGCR Region, complete sequence Length = 162269 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 112981 gtggtagtggtggtagtgat 112962 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 112352 gtggtagtggtggtagtgat 112333
>gb|AC006547.9| Homo sapiens chromosome 22 clone p158l19 map 22q11, complete sequence Length = 179269 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 125199 gtggtagtggtggtagtgat 125180 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 124570 gtggtagtggtggtagtgat 124551
>gb|AC058790.14| Homo sapiens chromosome 22 clone b518b9 map 22q11, complete sequence Length = 184929 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 22286 gtggtagtggtggtagtgat 22267 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 21657 gtggtagtggtggtagtgat 21638
>gb|AC007663.29| Homo sapiens chromosome 22 clone b444p24 map 22q11, complete sequence Length = 168239 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 10483 gtggtagtggtggtagtgat 10464 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 9854 gtggtagtggtggtagtgat 9835
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 ggcggcggagaccggcggga 294 |||||||||||||||||||| Sbjct: 17100796 ggcggcggagaccggcggga 17100815
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.7 Identities = 25/27 (92%) Strand = Plus / Plus Query: 449 cccgcccgcgccaggcgccgctgncgc 475 ||||||||||||| ||||||||| ||| Sbjct: 11588179 cccgcccgcgccaagcgccgctgccgc 11588205
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 393 cctccctgcgccgccgccgccggg 416 ||||||| |||||||||||||||| Sbjct: 18840138 cctcccttcgccgccgccgccggg 18840115
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gcgccgccgccgccgggtac 419 |||||||||||||||||||| Sbjct: 29831265 gcgccgccgccgccgggtac 29831284
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 gggcacggtgggcacggcgg 279 |||||||||||||||||||| Sbjct: 31383558 gggcacggtgggcacggcgg 31383539
>gb|AC096772.3| Homo sapiens BAC clone RP11-801F7 from 2, complete sequence Length = 177733 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 393 cctccctgcgccgccgccgccggg 416 |||||||||||||||||| ||||| Sbjct: 2603 cctccctgcgccgccgcctccggg 2580
>gb|AC139766.15| Homo sapiens 3 BAC RP11-688P9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187748 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 333 tggtagtggtggtagtgatagtag 356 ||||||||||||||||||| |||| Sbjct: 171461 tggtagtggtggtagtgatggtag 171484
>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0481E12 Length = 161563 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 gggcacggtgggcacggcgg 279 |||||||||||||||||||| Sbjct: 137841 gggcacggtgggcacggcgg 137822
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 cgcccgcgccaggcgccgct 470 |||||||||||||||||||| Sbjct: 3218232 cgcccgcgccaggcgccgct 3218213
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gcgccgccgccgccgggtac 419 |||||||||||||||||||| Sbjct: 26778 gcgccgccgccgccgggtac 26797
>gb|AC153981.5| Mus musculus 10 BAC RP24-112H16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 177129 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 58583 gtggtagtggtggtagtgat 58602
>dbj|AP003995.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1112_F06 Length = 104419 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 393 cctccctgcgccgccgccgccggg 416 ||||||| |||||||||||||||| Sbjct: 40324 cctcccttcgccgccgccgccggg 40301
>dbj|AK105337.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-F01, full insert sequence Length = 1764 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 gcgccgccgccgccgggtac 419 |||||||||||||||||||| Sbjct: 1458 gcgccgccgccgccgggtac 1439
>dbj|AK071975.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087L17, full insert sequence Length = 1687 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 gcgccgccgccgccgggtac 419 |||||||||||||||||||| Sbjct: 1385 gcgccgccgccgccgggtac 1366
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 316 ccagcccctgcgaggcgtggtagt 339 |||||||| ||||||||||||||| Sbjct: 2982078 ccagccccggcgaggcgtggtagt 2982101
>gb|AC124979.8| Mus musculus chromosome 3, clone RP24-117N14, complete sequence Length = 187567 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 30145 gtggtagtggtggtagtgat 30126
>gb|AE003425.3| Drosophila melanogaster chromosome X, section 9 of 74 of the complete sequence Length = 309053 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 98080 gtggtagtggtggtagtgat 98099
>gb|AC124118.15| Mus musculus chromosome 3, clone RP23-152K14, complete sequence Length = 199667 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 141449 gtggtagtggtggtagtgat 141430
>emb|CT571243.9| Mouse DNA sequence from clone RP23-122I21 on chromosome 9, complete sequence Length = 158763 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 10456 gtggtagtggtggtagtgat 10475
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.7 Identities = 25/27 (92%) Strand = Plus / Plus Query: 449 cccgcccgcgccaggcgccgctgncgc 475 ||||||||||||| ||||||||| ||| Sbjct: 11594619 cccgcccgcgccaagcgccgctgccgc 11594645
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 ggcggcggagaccggcggga 294 |||||||||||||||||||| Sbjct: 17195497 ggcggcggagaccggcggga 17195516
>gb|AC171204.1| Mus musculus BAC clone RP23-312J21 from chromosome 9, complete sequence Length = 223399 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 55293 gtggtagtggtggtagtgat 55312
>emb|AL807784.11| Mouse DNA sequence from clone RP23-448C18 on chromosome X, complete sequence Length = 127196 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 393 cctccctgcgccgccgccgccggg 416 |||||||||||||||||| ||||| Sbjct: 123567 cctccctgcgccgccgcctccggg 123590
>emb|AL670771.6| Mouse DNA sequence from clone RP23-256C8 on chromosome X, complete sequence Length = 219340 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 208433 gtggtagtggtggtagtgat 208452
>emb|AL049849.1|HSB1L1C6 Homo sapiens chromosome 21 BAC B1L1C6, complete sequence Length = 41185 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 gtggtagtggtggtagtgat 351 |||||||||||||||||||| Sbjct: 584 gtggtagtggtggtagtgat 565 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,944,232 Number of Sequences: 3902068 Number of extensions: 4944232 Number of successful extensions: 251122 Number of sequences better than 10.0: 125 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 244600 Number of HSP's gapped (non-prelim): 6498 length of query: 493 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 471 effective length of database: 17,147,199,772 effective search space: 8076331092612 effective search space used: 8076331092612 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)