ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags27f12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BABL_LILLO (P60496) Chemocyanin precursor (Basic blue protein) (... 127 4e-29
2BABL_ARATH (Q8LG89) Putative basic blue protein precursor (Plant... 99 1e-20
3BABL_CUCSA (P00303) Basic blue protein (Cusacyanin) (Plantacyani... 97 3e-20
4BCB2_ARATH (O80517) Uclacyanin-2 precursor (Uclacyanin-II) (Blue... 77 6e-14
5BCP_PEA (Q41001) Blue copper protein precursor 71 2e-12
6STEL_RHUVE (P00302) Stellacyanin 69 9e-12
7MAVI_CUCPE (P80728) Mavicyanin 69 1e-11
8ENL1_ARATH (Q9SK27) Early nodulin-like protein 1 precursor (Phyt... 54 4e-07
9BCB1_ARATH (Q07488) Blue copper protein precursor (Blue copper-b... 48 3e-05
10NO552_SOYBN (Q02917) Early nodulin 55-2 precursor (N-55-2) (Nodu... 47 4e-05
11UMEC_ARMRU (P42849) Umecyanin (UMC) 47 6e-05
12ENL3_ARATH (Q8LC95) Early nodulin-like protein 3 precursor (Phyt... 44 4e-04
13CPC_CUCSA (P29602) Cucumber peeling cupredoxin (CPC) (Stellacyanin) 43 0.001
14ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phyt... 41 0.003
15NO16_MEDTR (P93328) Early nodulin 16 precursor (N-16) 38 0.022
16NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20) 35 0.25
17PRDM2_RAT (Q63755) PR domain zinc finger protein 2 (PR domain-co... 32 1.2
18A1AT_SHEEP (P12725) Alpha-1-antiproteinase precursor (Alpha-1-an... 31 2.7
19NO551_SOYBN (Q05544) Early nodulin 55-1 (N-55-1) (Fragment) 30 6.1
20SI1L3_HUMAN (O60292) Signal-induced proliferation-associated 1-l... 30 6.1
21RUS2_THIFE (P24930) Rusticyanin precursor 30 7.9
22RUS1_THIFE (P23742) Rusticyanin 30 7.9

>BABL_LILLO (P60496) Chemocyanin precursor (Basic blue protein) (Plantacyanin)|
          Length = 126

 Score =  127 bits (318), Expect = 4e-29
 Identities = 59/96 (61%), Positives = 67/96 (69%), Gaps = 4/96 (4%)
 Frame = -1

Query: 584 EFAESKVYTVG----WAVSSGGWPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAA 417
           E AES VYTVG    W   + GWP GK FRAGDVL+FKY    H        GYKSC+A+
Sbjct: 26  EVAESVVYTVGDGGGWTFGTSGWPAGKTFRAGDVLVFKYNPAVHNVVSVPAGGYKSCTAS 85

Query: 416 RGSRTYNSGSDRVTLSRGTNYFICSVPGHCQAGMKM 309
            GSR + SG DR+TLSRGTNYFICSVPGHCQ G+K+
Sbjct: 86  PGSRVFKSGDDRITLSRGTNYFICSVPGHCQGGLKI 121



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>BABL_ARATH (Q8LG89) Putative basic blue protein precursor (Plantacyanin)|
          Length = 129

 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
 Frame = -1

Query: 584 EFAESKVYTVG----WAVSSGGWPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAA 417
           ++ ++  YTVG    W  ++ GWP+GK FRAGDVL+F Y    H         Y +C   
Sbjct: 29  DYVQAATYTVGDSGIWTFNAVGWPKGKHFRAGDVLVFNYNPRMHNVVKVDSGSYNNCKTP 88

Query: 416 RGSRTYNSGSDRVTLSRGTNYFICSVPGHCQAGMKM 309
            G++ Y SG DR+TLS+G N+FIC+ P HC++ MK+
Sbjct: 89  TGAKPYTSGKDRITLSKGQNFFICNFPNHCESDMKI 124



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>BABL_CUCSA (P00303) Basic blue protein (Cusacyanin) (Plantacyanin) (CBP)|
          Length = 96

 Score = 97.4 bits (241), Expect = 3e-20
 Identities = 38/82 (46%), Positives = 54/82 (65%)
 Frame = -1

Query: 554 GWAVSSGGWPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSRTYNSGSDRVT 375
           GW  ++  WP+GKRFRAGD+LLF Y    H        G+ +C+   G++ Y SG D++ 
Sbjct: 10  GWTFNTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIK 69

Query: 374 LSRGTNYFICSVPGHCQAGMKM 309
           L +G +YFIC+ PGHCQ+GMK+
Sbjct: 70  LPKGQSYFICNFPGHCQSGMKI 91



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>BCB2_ARATH (O80517) Uclacyanin-2 precursor (Uclacyanin-II) (Blue|
           copper-binding protein II) (BCB II) (Phytocyanin 2)
          Length = 202

 Score = 76.6 bits (187), Expect = 6e-14
 Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
 Frame = -1

Query: 578 AESKVYTVGWA--VSSGGWPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSR 405
           A +  YT+ W   V   GW  GK FR GD+L FKYG  +H       AGY  C A+  + 
Sbjct: 27  AVAVTYTIEWTTGVDYSGWATGKTFRVGDILEFKYG-SSHTVDVVDKAGYDGCDASSSTE 85

Query: 404 TYNSGSDRVTLSR-GTNYFICSVPGHCQ--AGMKM 309
            ++ G  ++ L   G NYFICS PGHC+   GMK+
Sbjct: 86  NHSDGDTKIDLKTVGINYFICSTPGHCRTNGGMKL 120



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>BCP_PEA (Q41001) Blue copper protein precursor|
          Length = 189

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
 Frame = -1

Query: 566 VYTVG----WAVSS--GGWPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSR 405
           VYTVG    W +      W   K F  GD L+F YG GAH       + YKSC++     
Sbjct: 26  VYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGNSIS 85

Query: 404 TYNSGSDRVTLSR-GTNYFICSVPGHCQAGMKM 309
           T ++G+  + L + G +YFIC VPGH   GMK+
Sbjct: 86  TDSTGATTIPLKKAGKHYFICGVPGHSTGGMKL 118



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>STEL_RHUVE (P00302) Stellacyanin|
          Length = 107

 Score = 69.3 bits (168), Expect = 9e-12
 Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
 Frame = -1

Query: 566 VYTVG----WAVSSGG-------WPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSA 420
           VYTVG    W V   G       W   K F  GDVL+FKY R  H         Y+SC+ 
Sbjct: 2   VYTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCND 61

Query: 419 ARGSRTYNSGSDRVTLSR-GTNYFICSVPGHCQAGMKM 309
                +YN+G +R+ L   G  Y+IC VP HC  G K+
Sbjct: 62  TTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKV 99



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>MAVI_CUCPE (P80728) Mavicyanin|
          Length = 108

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = -1

Query: 530 WPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSRTYNSGSDRVTLSR-GTNY 354
           W    +F  GD LLF Y    H         +KSC+++  + +Y SG+D + L R GT Y
Sbjct: 23  WASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFY 82

Query: 353 FICSVPGHCQAGMKM 309
           F+C +PGHCQ G K+
Sbjct: 83  FLCGIPGHCQLGQKV 97



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>ENL1_ARATH (Q9SK27) Early nodulin-like protein 1 precursor (Phytocyanin-like|
           protein)
          Length = 176

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = -1

Query: 530 WPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSRTYNSGSDRVTLSR-GTNY 354
           W +  RF+ GD ++F+Y  G           Y SC+       Y  G  +V L R G  Y
Sbjct: 47  WAQKARFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFY 106

Query: 353 FICSVPGHCQAGMKM 309
           FI    GHC+ G K+
Sbjct: 107 FISGANGHCEKGQKL 121



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>BCB1_ARATH (Q07488) Blue copper protein precursor (Blue copper-binding|
           protein) (AtBCB) (Stellacyanin) (Phytocyanin 1)
          Length = 196

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = -1

Query: 530 WPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSRTYNSGSDRVTL-SRGTNY 354
           W  GK FR GD L F +  G H       A +++C   +          ++ L + G  Y
Sbjct: 45  WATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEKEKPISHMTVPPVKIMLNTTGPQY 104

Query: 353 FICSVPGHCQAGMKM 309
           FIC+V  HC+ G K+
Sbjct: 105 FICTVGDHCRFGQKL 119



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>NO552_SOYBN (Q02917) Early nodulin 55-2 precursor (N-55-2) (Nodulin-315)|
          Length = 187

 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
 Frame = -1

Query: 530 WPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSC-SAARGSRTYNSGSDRVTLSR-GTN 357
           W    RF+ GD L+FKY +            Y+ C +  +    +N G+ +V L++ G  
Sbjct: 51  WANSHRFKIGDTLIFKYEKRTESVHEGNETDYEGCNTVGKYHIVFNGGNTKVMLTKPGFR 110

Query: 356 YFICSVPGHCQAGMKM 309
           +FI     HCQ G+K+
Sbjct: 111 HFISGNQSHCQMGLKL 126



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>UMEC_ARMRU (P42849) Umecyanin (UMC)|
          Length = 115

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = -1

Query: 530 WPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSRTYNSGSDRVTL-SRGTNY 354
           W  GK FR GD L F +  G H         + +C          +   ++ L + G  Y
Sbjct: 23  WATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTGPQY 82

Query: 353 FICSVPGHCQAGMKM 309
           +IC+V  HC+ G K+
Sbjct: 83  YICTVGDHCRVGQKL 97



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>ENL3_ARATH (Q8LC95) Early nodulin-like protein 3 precursor (Phytocyanin-like|
           protein)
          Length = 186

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = -1

Query: 530 WPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSRTYNSGSDRVTLSR-GTNY 354
           W    RFR GD L++KY              Y +C+    +  Y++G  +V L R G  +
Sbjct: 48  WAESLRFRVGDTLVWKYDEEKDSVLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYF 107

Query: 353 FICSVPGHCQAGMKM 309
           FI     +C  G K+
Sbjct: 108 FISGSKSNCVEGEKL 122



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>CPC_CUCSA (P29602) Cucumber peeling cupredoxin (CPC) (Stellacyanin)|
          Length = 137

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 8/90 (8%)
 Frame = -1

Query: 554 GWAVSSGG-----WPRGKRFRAGDVLLFKYGRGAHXXXXXXXA-GYKSCSAARGSRTYNS 393
           GW+V S       W  GK FR GD L F +   AH          + +C+          
Sbjct: 12  GWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDNDVER 71

Query: 392 GSDRVTL--SRGTNYFICSVPGHCQAGMKM 309
            S  +      G +YF+C+V  HC  G K+
Sbjct: 72  TSPVIERLDELGMHYFVCTVGTHCSNGQKL 101



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>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like|
           protein)
          Length = 349

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
 Frame = -1

Query: 530 WPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSRTYNSGSDRVTLSR-GTNY 354
           W    RF   D L F Y +GA        A Y +C+     +  + G   ++L R G  Y
Sbjct: 50  WSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKRVDDGDSEISLDRYGPFY 109

Query: 353 FICSVPGHCQAGMKM 309
           FI     +C+ G K+
Sbjct: 110 FISGNEDNCKKGQKL 124



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>NO16_MEDTR (P93328) Early nodulin 16 precursor (N-16)|
          Length = 180

 Score = 38.1 bits (87), Expect = 0.022
 Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
 Frame = -1

Query: 530 WPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSRTYNSGSDRVTLSR-GTNY 354
           W     F  GD +LF+Y              Y  C        ++ G+ +V L + G  +
Sbjct: 49  WASAHEFTVGDTILFEYDNETESVHEVNEHDYIMCHTNGEHVEHHDGNTKVVLDKIGVYH 108

Query: 353 FICSVPGHCQAGMKM 309
           FI     HC+ G+K+
Sbjct: 109 FISGTKRHCKMGLKL 123



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>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)|
          Length = 268

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
 Frame = -1

Query: 530 WPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSRTYNSGSDRVTLSR-GTNY 354
           W    +F  GD + F+Y              Y  C        +  G+  V L + G ++
Sbjct: 49  WASNYQFIVGDTITFQYNNKTESVHEVEEEDYDRCGIRGEHVDHYDGNTMVVLKKTGIHH 108

Query: 353 FICSVPGHCQAGMKM 309
           FI     HC+ G+K+
Sbjct: 109 FISGKKRHCRLGLKL 123



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>PRDM2_RAT (Q63755) PR domain zinc finger protein 2 (PR domain-containing|
            protein 2) (Retinoblastoma protein-interacting
            zinc-finger protein) (Zinc finger protein RIZ)
          Length = 1706

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 19/63 (30%), Positives = 32/63 (50%)
 Frame = +1

Query: 439  PAAFTATTLCAPRPYLNSSTSPARKRLPLGQPPELTAQPTVYTFDSANSPWRSTQRRTSA 618
            P+ F+ TT  +P P L+ + SP+   +P  +P    A P   T  S++S   S    + +
Sbjct: 1000 PSPFSNTTAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSFPSSSCS 1059

Query: 619  STA 627
            ST+
Sbjct: 1060 STS 1062



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>A1AT_SHEEP (P12725) Alpha-1-antiproteinase precursor (Alpha-1-antitrypsin)|
           (Alpha-1-proteinase inhibitor)
          Length = 416

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = -1

Query: 119 NESNTV---VLFRLSMLSCLYCTRVLSYCVILKYGANVWNCF 3
           NE  TV   ++ RL M    YC ++ S+ ++L Y  NV  CF
Sbjct: 233 NEQTTVKVPMMNRLGMFDLHYCDKLASWVLLLDYVGNVTACF 274



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>NO551_SOYBN (Q05544) Early nodulin 55-1 (N-55-1) (Fragment)|
          Length = 137

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = -1

Query: 485 KYGRGAHXXXXXXXAGYKSCSAARGSRT-YNSGSDRVTLSR-GTNYFICSVPGHCQAGMK 312
           KY              Y+ C+        +N G+ +V L++ G  +FI     HCQ G+K
Sbjct: 1   KYDERTESVHEVNETDYEQCNTVGKEHVLFNDGNTKVMLTKSGFRHFISGNQSHCQMGLK 60

Query: 311 M 309
           +
Sbjct: 61  L 61



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>SI1L3_HUMAN (O60292) Signal-induced proliferation-associated 1-like protein 3|
           (SPA-1-like protein 3)
          Length = 1781

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 213 PDAASCSKISVTRRKESKPKLISAGGSCGGDGH 311
           PDA  C  ++   R +  P L+  GG   GD H
Sbjct: 230 PDARGCQALTELLRADPGPHLMGGGGGAKGDSH 262



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>RUS2_THIFE (P24930) Rusticyanin precursor|
          Length = 187

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 365 GTNYFICSVPGHCQAGM 315
           GT Y++C +PGH   GM
Sbjct: 164 GTYYYVCQIPGHAATGM 180



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>RUS1_THIFE (P23742) Rusticyanin|
          Length = 155

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 365 GTNYFICSVPGHCQAGM 315
           GT Y++C +PGH   GM
Sbjct: 132 GTYYYVCQIPGHAATGM 148


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,992,555
Number of Sequences: 219361
Number of extensions: 1352001
Number of successful extensions: 4205
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4192
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5995743495
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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