| Clone Name | rbags27f12 |
|---|---|
| Clone Library Name | barley_pub |
>BABL_LILLO (P60496) Chemocyanin precursor (Basic blue protein) (Plantacyanin)| Length = 126 Score = 127 bits (318), Expect = 4e-29 Identities = 59/96 (61%), Positives = 67/96 (69%), Gaps = 4/96 (4%) Frame = -1 Query: 584 EFAESKVYTVG----WAVSSGGWPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAA 417 E AES VYTVG W + GWP GK FRAGDVL+FKY H GYKSC+A+ Sbjct: 26 EVAESVVYTVGDGGGWTFGTSGWPAGKTFRAGDVLVFKYNPAVHNVVSVPAGGYKSCTAS 85 Query: 416 RGSRTYNSGSDRVTLSRGTNYFICSVPGHCQAGMKM 309 GSR + SG DR+TLSRGTNYFICSVPGHCQ G+K+ Sbjct: 86 PGSRVFKSGDDRITLSRGTNYFICSVPGHCQGGLKI 121
>BABL_ARATH (Q8LG89) Putative basic blue protein precursor (Plantacyanin)| Length = 129 Score = 98.6 bits (244), Expect = 1e-20 Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 4/96 (4%) Frame = -1 Query: 584 EFAESKVYTVG----WAVSSGGWPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAA 417 ++ ++ YTVG W ++ GWP+GK FRAGDVL+F Y H Y +C Sbjct: 29 DYVQAATYTVGDSGIWTFNAVGWPKGKHFRAGDVLVFNYNPRMHNVVKVDSGSYNNCKTP 88 Query: 416 RGSRTYNSGSDRVTLSRGTNYFICSVPGHCQAGMKM 309 G++ Y SG DR+TLS+G N+FIC+ P HC++ MK+ Sbjct: 89 TGAKPYTSGKDRITLSKGQNFFICNFPNHCESDMKI 124
>BABL_CUCSA (P00303) Basic blue protein (Cusacyanin) (Plantacyanin) (CBP)| Length = 96 Score = 97.4 bits (241), Expect = 3e-20 Identities = 38/82 (46%), Positives = 54/82 (65%) Frame = -1 Query: 554 GWAVSSGGWPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSRTYNSGSDRVT 375 GW ++ WP+GKRFRAGD+LLF Y H G+ +C+ G++ Y SG D++ Sbjct: 10 GWTFNTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIK 69 Query: 374 LSRGTNYFICSVPGHCQAGMKM 309 L +G +YFIC+ PGHCQ+GMK+ Sbjct: 70 LPKGQSYFICNFPGHCQSGMKI 91
>BCB2_ARATH (O80517) Uclacyanin-2 precursor (Uclacyanin-II) (Blue| copper-binding protein II) (BCB II) (Phytocyanin 2) Length = 202 Score = 76.6 bits (187), Expect = 6e-14 Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 5/95 (5%) Frame = -1 Query: 578 AESKVYTVGWA--VSSGGWPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSR 405 A + YT+ W V GW GK FR GD+L FKYG +H AGY C A+ + Sbjct: 27 AVAVTYTIEWTTGVDYSGWATGKTFRVGDILEFKYG-SSHTVDVVDKAGYDGCDASSSTE 85 Query: 404 TYNSGSDRVTLSR-GTNYFICSVPGHCQ--AGMKM 309 ++ G ++ L G NYFICS PGHC+ GMK+ Sbjct: 86 NHSDGDTKIDLKTVGINYFICSTPGHCRTNGGMKL 120
>BCP_PEA (Q41001) Blue copper protein precursor| Length = 189 Score = 71.2 bits (173), Expect = 2e-12 Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 7/93 (7%) Frame = -1 Query: 566 VYTVG----WAVSS--GGWPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSR 405 VYTVG W + W K F GD L+F YG GAH + YKSC++ Sbjct: 26 VYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGNSIS 85 Query: 404 TYNSGSDRVTLSR-GTNYFICSVPGHCQAGMKM 309 T ++G+ + L + G +YFIC VPGH GMK+ Sbjct: 86 TDSTGATTIPLKKAGKHYFICGVPGHSTGGMKL 118
>STEL_RHUVE (P00302) Stellacyanin| Length = 107 Score = 69.3 bits (168), Expect = 9e-12 Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 12/98 (12%) Frame = -1 Query: 566 VYTVG----WAVSSGG-------WPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSA 420 VYTVG W V G W K F GDVL+FKY R H Y+SC+ Sbjct: 2 VYTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCND 61 Query: 419 ARGSRTYNSGSDRVTLSR-GTNYFICSVPGHCQAGMKM 309 +YN+G +R+ L G Y+IC VP HC G K+ Sbjct: 62 TTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKV 99
>MAVI_CUCPE (P80728) Mavicyanin| Length = 108 Score = 68.9 bits (167), Expect = 1e-11 Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Frame = -1 Query: 530 WPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSRTYNSGSDRVTLSR-GTNY 354 W +F GD LLF Y H +KSC+++ + +Y SG+D + L R GT Y Sbjct: 23 WASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFY 82 Query: 353 FICSVPGHCQAGMKM 309 F+C +PGHCQ G K+ Sbjct: 83 FLCGIPGHCQLGQKV 97
>ENL1_ARATH (Q9SK27) Early nodulin-like protein 1 precursor (Phytocyanin-like| protein) Length = 176 Score = 53.9 bits (128), Expect = 4e-07 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Frame = -1 Query: 530 WPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSRTYNSGSDRVTLSR-GTNY 354 W + RF+ GD ++F+Y G Y SC+ Y G +V L R G Y Sbjct: 47 WAQKARFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFY 106 Query: 353 FICSVPGHCQAGMKM 309 FI GHC+ G K+ Sbjct: 107 FISGANGHCEKGQKL 121
>BCB1_ARATH (Q07488) Blue copper protein precursor (Blue copper-binding| protein) (AtBCB) (Stellacyanin) (Phytocyanin 1) Length = 196 Score = 47.8 bits (112), Expect = 3e-05 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = -1 Query: 530 WPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSRTYNSGSDRVTL-SRGTNY 354 W GK FR GD L F + G H A +++C + ++ L + G Y Sbjct: 45 WATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEKEKPISHMTVPPVKIMLNTTGPQY 104 Query: 353 FICSVPGHCQAGMKM 309 FIC+V HC+ G K+ Sbjct: 105 FICTVGDHCRFGQKL 119
>NO552_SOYBN (Q02917) Early nodulin 55-2 precursor (N-55-2) (Nodulin-315)| Length = 187 Score = 47.4 bits (111), Expect = 4e-05 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = -1 Query: 530 WPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSC-SAARGSRTYNSGSDRVTLSR-GTN 357 W RF+ GD L+FKY + Y+ C + + +N G+ +V L++ G Sbjct: 51 WANSHRFKIGDTLIFKYEKRTESVHEGNETDYEGCNTVGKYHIVFNGGNTKVMLTKPGFR 110 Query: 356 YFICSVPGHCQAGMKM 309 +FI HCQ G+K+ Sbjct: 111 HFISGNQSHCQMGLKL 126
>UMEC_ARMRU (P42849) Umecyanin (UMC)| Length = 115 Score = 46.6 bits (109), Expect = 6e-05 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%) Frame = -1 Query: 530 WPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSRTYNSGSDRVTL-SRGTNY 354 W GK FR GD L F + G H + +C + ++ L + G Y Sbjct: 23 WATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTGPQY 82 Query: 353 FICSVPGHCQAGMKM 309 +IC+V HC+ G K+ Sbjct: 83 YICTVGDHCRVGQKL 97
>ENL3_ARATH (Q8LC95) Early nodulin-like protein 3 precursor (Phytocyanin-like| protein) Length = 186 Score = 43.9 bits (102), Expect = 4e-04 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%) Frame = -1 Query: 530 WPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSRTYNSGSDRVTLSR-GTNY 354 W RFR GD L++KY Y +C+ + Y++G +V L R G + Sbjct: 48 WAESLRFRVGDTLVWKYDEEKDSVLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYF 107 Query: 353 FICSVPGHCQAGMKM 309 FI +C G K+ Sbjct: 108 FISGSKSNCVEGEKL 122
>CPC_CUCSA (P29602) Cucumber peeling cupredoxin (CPC) (Stellacyanin)| Length = 137 Score = 42.7 bits (99), Expect = 0.001 Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 8/90 (8%) Frame = -1 Query: 554 GWAVSSGG-----WPRGKRFRAGDVLLFKYGRGAHXXXXXXXA-GYKSCSAARGSRTYNS 393 GW+V S W GK FR GD L F + AH + +C+ Sbjct: 12 GWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDNDVER 71 Query: 392 GSDRVTL--SRGTNYFICSVPGHCQAGMKM 309 S + G +YF+C+V HC G K+ Sbjct: 72 TSPVIERLDELGMHYFVCTVGTHCSNGQKL 101
>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like| protein) Length = 349 Score = 41.2 bits (95), Expect = 0.003 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%) Frame = -1 Query: 530 WPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSRTYNSGSDRVTLSR-GTNY 354 W RF D L F Y +GA A Y +C+ + + G ++L R G Y Sbjct: 50 WSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKRVDDGDSEISLDRYGPFY 109 Query: 353 FICSVPGHCQAGMKM 309 FI +C+ G K+ Sbjct: 110 FISGNEDNCKKGQKL 124
>NO16_MEDTR (P93328) Early nodulin 16 precursor (N-16)| Length = 180 Score = 38.1 bits (87), Expect = 0.022 Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 1/75 (1%) Frame = -1 Query: 530 WPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSRTYNSGSDRVTLSR-GTNY 354 W F GD +LF+Y Y C ++ G+ +V L + G + Sbjct: 49 WASAHEFTVGDTILFEYDNETESVHEVNEHDYIMCHTNGEHVEHHDGNTKVVLDKIGVYH 108 Query: 353 FICSVPGHCQAGMKM 309 FI HC+ G+K+ Sbjct: 109 FISGTKRHCKMGLKL 123
>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)| Length = 268 Score = 34.7 bits (78), Expect = 0.25 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 1/75 (1%) Frame = -1 Query: 530 WPRGKRFRAGDVLLFKYGRGAHXXXXXXXAGYKSCSAARGSRTYNSGSDRVTLSR-GTNY 354 W +F GD + F+Y Y C + G+ V L + G ++ Sbjct: 49 WASNYQFIVGDTITFQYNNKTESVHEVEEEDYDRCGIRGEHVDHYDGNTMVVLKKTGIHH 108 Query: 353 FICSVPGHCQAGMKM 309 FI HC+ G+K+ Sbjct: 109 FISGKKRHCRLGLKL 123
>PRDM2_RAT (Q63755) PR domain zinc finger protein 2 (PR domain-containing| protein 2) (Retinoblastoma protein-interacting zinc-finger protein) (Zinc finger protein RIZ) Length = 1706 Score = 32.3 bits (72), Expect = 1.2 Identities = 19/63 (30%), Positives = 32/63 (50%) Frame = +1 Query: 439 PAAFTATTLCAPRPYLNSSTSPARKRLPLGQPPELTAQPTVYTFDSANSPWRSTQRRTSA 618 P+ F+ TT +P P L+ + SP+ +P +P A P T S++S S + + Sbjct: 1000 PSPFSNTTAQSPLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSFPSSSCS 1059 Query: 619 STA 627 ST+ Sbjct: 1060 STS 1062
>A1AT_SHEEP (P12725) Alpha-1-antiproteinase precursor (Alpha-1-antitrypsin)| (Alpha-1-proteinase inhibitor) Length = 416 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%) Frame = -1 Query: 119 NESNTV---VLFRLSMLSCLYCTRVLSYCVILKYGANVWNCF 3 NE TV ++ RL M YC ++ S+ ++L Y NV CF Sbjct: 233 NEQTTVKVPMMNRLGMFDLHYCDKLASWVLLLDYVGNVTACF 274
>NO551_SOYBN (Q05544) Early nodulin 55-1 (N-55-1) (Fragment)| Length = 137 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Frame = -1 Query: 485 KYGRGAHXXXXXXXAGYKSCSAARGSRT-YNSGSDRVTLSR-GTNYFICSVPGHCQAGMK 312 KY Y+ C+ +N G+ +V L++ G +FI HCQ G+K Sbjct: 1 KYDERTESVHEVNETDYEQCNTVGKEHVLFNDGNTKVMLTKSGFRHFISGNQSHCQMGLK 60 Query: 311 M 309 + Sbjct: 61 L 61
>SI1L3_HUMAN (O60292) Signal-induced proliferation-associated 1-like protein 3| (SPA-1-like protein 3) Length = 1781 Score = 30.0 bits (66), Expect = 6.1 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = +3 Query: 213 PDAASCSKISVTRRKESKPKLISAGGSCGGDGH 311 PDA C ++ R + P L+ GG GD H Sbjct: 230 PDARGCQALTELLRADPGPHLMGGGGGAKGDSH 262
>RUS2_THIFE (P24930) Rusticyanin precursor| Length = 187 Score = 29.6 bits (65), Expect = 7.9 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = -1 Query: 365 GTNYFICSVPGHCQAGM 315 GT Y++C +PGH GM Sbjct: 164 GTYYYVCQIPGHAATGM 180
>RUS1_THIFE (P23742) Rusticyanin| Length = 155 Score = 29.6 bits (65), Expect = 7.9 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = -1 Query: 365 GTNYFICSVPGHCQAGM 315 GT Y++C +PGH GM Sbjct: 132 GTYYYVCQIPGHAATGM 148 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,992,555 Number of Sequences: 219361 Number of extensions: 1352001 Number of successful extensions: 4205 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 4038 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4192 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)