>UVRA_CHLPN (Q9Z985) UvrABC system protein A (UvrA protein) (Excinuclease ABC|
           subunit A)
          Length = 1826

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -1

Query: 184 CCSFVAPNSSGLFRGIYRALRDNLN 110
           CCSF    SS L+  IY+AL D LN
Sbjct: 297 CCSFAGNCSSYLYHTIYQALADALN 321

>RL4_BIFLO (Q8G416) 50S ribosomal protein L4|
          Length = 218

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
 Frame = -1

Query: 349 TFRTGSWMTGSSVIEIWLXAVTR*TKKFXHPATLR---PERANESACESLDRG---PFNF 188
           + R   W  G +V        ++ T K    A LR    +RAN      ++ G   P   
Sbjct: 84  SIRAPQWYHGGTVFGPQPRDYSQRTPKKMKAAALRYALSDRANAGRVAVVEFGITEPSTK 143

Query: 187 LCCSFVAPNSSGLFRGIYRALRDNLNKVASVLGVKIMYPISLRSRNFANVIVVNYI 20
              + +AP ++  F  +    RDN+N+  SV  +  ++PI +   N  +VI   Y+
Sbjct: 144 AAVAALAPITADKFTTVVFT-RDNINEWLSVRNIPTVHPIFVDQLNTYDVITSQYV 198

>MYO1C_MOUSE (Q9WTI7) Myosin Ic (Myosin I beta) (MMIb)|
          Length = 1028

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 9/96 (9%)
 Frame = -1

Query: 262 HPATLRPERANESACESLDRGPFNFL---------CCSFVAPNSSGLFRGIYRALRDNLN 110
           HP  L  + A++   +SLDRG F  L            F+  N+  LFR +   +  ++N
Sbjct: 485 HPHFLTHKLADQKTRKSLDRGEFRLLHYAGEVTYSVTGFLDKNNDLLFRNLKETMCSSMN 544

Query: 109 KVASVLGVKIMYPISLRSRNFANVIVVNYIQLXNLL 2
            + +    K       R    A    ++ +QL  +L
Sbjct: 545 PIMAQCFDKSELSDKKRPETVATQFKMSLLQLVEIL 580

>YROS_RHIET (Q52742) Hypothetical sufE-like protein in rosR 3'region|
          Length = 151

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 332 LDDWEQRYRDLVXSGNPVDQKVXSSRNPK 246
           LDDWE RYR ++  G  + +     R P+
Sbjct: 22  LDDWEDRYRYVIELGKALPELAEEKRTPE 50

>LAML3_XENLA (P10999) Lamin-L(III) (Lamin-B3)|
          Length = 583

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +3

Query: 156 LELGATKEQHRKLNGPRSRDSHALSLARSGLR 251
           +ELG  +E++R+L    S+  + LSLA++ LR
Sbjct: 103 VELGKVREEYRQLQARNSKKENDLSLAQNQLR 134


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,005,296
Number of Sequences: 219361
Number of extensions: 990933
Number of successful extensions: 2559
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2559
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)