ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags27f07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X75777.1|ASTCPP1 A.sativa (Pewi) ASTCP-K19 mRNA for t complex polypeptide 1 Length = 2039 Score = 414 bits (209), Expect = e-112 Identities = 272/293 (92%) Strand = Plus / Minus Query: 221 tcaatactcggaaggcgttataacatcatcgatcttgaggatcatcttgacaacctgtgt 280 |||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| || Sbjct: 1715 tcaatattcggaaggcgtgataacatcatcgatcttgaggatcatcttgacgacctgggt 1656 Query: 281 tgccagcaagatctgctgctgcttgccgatcagagtctcgaaaacattctgctctttcat 340 ||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||| Sbjct: 1655 tgccagcaagatctgctgctgcttgccaatcagagtttcaaaaacattctgctctttcat 1596 Query: 341 gtcgttggtaccaacatcattgcaatcgatgccacagcgggaattgttctccttgacgtg 400 ||| |||||||| ||||| ||||| || ||||| ||||||||||||||||||||||| || Sbjct: 1595 gtcattggtacccacatcgttgcagtcaatgccgcagcgggaattgttctccttgacatg 1536 Query: 401 ttgagattttacgacggtgagagtatcaataggtgccaaaccactgttttcagctaaagc 460 ||| |||||||| || || |||||||||||||||| |||||||||||||||||||||||| Sbjct: 1535 ttgggattttaccactgtcagagtatcaataggtggcaaaccactgttttcagctaaagc 1476 Query: 461 tagtggaatggcatccaaagcatcagcaaatgccctgattgcatactgctcaa 513 |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1475 cagtggaatagcatccaaagcatcagcaaatgccctgattgcatactgctcaa 1423 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 19 aaactggtatcgacaggatttgt 41 ||||||||||||||||||||||| Sbjct: 1927 aaactggtatcgacaggatttgt 1905
>emb|X75778.1|ASTCPP1A A.sativa (Pewi) ASTCP-K36 mRNA for t complex polypeptide 1 Length = 2022 Score = 410 bits (207), Expect = e-111 Identities = 264/283 (93%) Strand = Plus / Minus Query: 231 gaaggcgttataacatcatcgatcttgaggatcatcttgacaacctgtgttgccagcaag 290 |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 1730 gaaggcgtgataacatcatcgatcttgaggatcatcttgacgacctgggttgccagcaag 1671 Query: 291 atctgctgctgcttgccgatcagagtctcgaaaacattctgctctttcatgtcgttggta 350 ||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||| Sbjct: 1670 atctgctgctgcttgccaatcagagtttcgaaaacattctgctctttcatgtcattggta 1611 Query: 351 ccaacatcattgcaatcgatgccacagcgggaattgttctccttgacgtgttgagatttt 410 || |||||||||||||| ||||| || || ||||||||||||||||| |||||||||||| Sbjct: 1610 cccacatcattgcaatcaatgccgcaacgagaattgttctccttgacatgttgagatttt 1551 Query: 411 acgacggtgagagtatcaataggtgccaaaccactgttttcagctaaagctagtggaatg 470 || ||||| |||||||||||||||| |||||||||||||||||||||||| | |||||| Sbjct: 1550 accacggtcagagtatcaataggtggcaaaccactgttttcagctaaagccaatggaata 1491 Query: 471 gcatccaaagcatcagcaaatgccctgattgcatactgctcaa 513 |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1490 gcatccaaagcatcagcaaatgccctgattgcatactgttcaa 1448 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 19 aaactggtatcgacaggatttgt 41 ||||||||||||||||||||||| Sbjct: 1956 aaactggtatcgacaggatttgt 1934
>dbj|AK105701.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-D07, full insert sequence Length = 2088 Score = 252 bits (127), Expect = 1e-63 Identities = 253/295 (85%) Strand = Plus / Minus Query: 219 catcaatactcggaaggcgttataacatcatcgatcttgaggatcatcttgacaacctgt 278 |||||||| || ||||||| |||||||||||||||||||| |||||||| || ||||| Sbjct: 1703 catcaatagtcagaaggcgagataacatcatcgatcttgagaatcatcttcaccacctgg 1644 Query: 279 gttgccagcaagatctgctgctgcttgccgatcagagtctcgaaaacattctgctctttc 338 |||||||| |||||||||||||||||||| ||||| || || |||||||| || || ||| Sbjct: 1643 gttgccagtaagatctgctgctgcttgcctatcagtgtttcaaaaacattttgttccttc 1584 Query: 339 atgtcgttggtaccaacatcattgcaatcgatgccacagcgggaattgttctccttgacg 398 |||| ||| || |||||||| ||||| || ||||||||| | | |||| ||||||| || Sbjct: 1583 atgtggtttgtcccaacatcgttgcagtcaatgccacagtgaggattgctctcctttact 1524 Query: 399 tgttgagattttacgacggtgagagtatcaataggtgccaaaccactgttttcagctaaa 458 |||||||||||||| | || || ||||||||||| | ||||||||||||||| || || Sbjct: 1523 tgttgagattttactgctgtcagtgtatcaataggagacaaaccactgttttcggccaag 1464 Query: 459 gctagtggaatggcatccaaagcatcagcaaatgccctgattgcatactgctcaa 513 ||||||||||| |||||||| ||||||||||||| ||||||||||||||| |||| Sbjct: 1463 gctagtggaatagcatccaacgcatcagcaaatgacctgattgcatactgttcaa 1409
>dbj|AK067114.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095K16, full insert sequence Length = 2100 Score = 252 bits (127), Expect = 1e-63 Identities = 253/295 (85%) Strand = Plus / Minus Query: 219 catcaatactcggaaggcgttataacatcatcgatcttgaggatcatcttgacaacctgt 278 |||||||| || ||||||| |||||||||||||||||||| |||||||| || ||||| Sbjct: 1717 catcaatagtcagaaggcgagataacatcatcgatcttgagaatcatcttcaccacctgg 1658 Query: 279 gttgccagcaagatctgctgctgcttgccgatcagagtctcgaaaacattctgctctttc 338 |||||||| |||||||||||||||||||| ||||| || || |||||||| || || ||| Sbjct: 1657 gttgccagtaagatctgctgctgcttgcctatcagtgtttcaaaaacattttgttccttc 1598 Query: 339 atgtcgttggtaccaacatcattgcaatcgatgccacagcgggaattgttctccttgacg 398 |||| ||| || |||||||| ||||| || ||||||||| | | |||| ||||||| || Sbjct: 1597 atgtggtttgtcccaacatcgttgcagtcaatgccacagtgaggattgctctcctttact 1538 Query: 399 tgttgagattttacgacggtgagagtatcaataggtgccaaaccactgttttcagctaaa 458 |||||||||||||| | || || ||||||||||| | ||||||||||||||| || || Sbjct: 1537 tgttgagattttactgctgtcagtgtatcaataggagacaaaccactgttttcggccaag 1478 Query: 459 gctagtggaatggcatccaaagcatcagcaaatgccctgattgcatactgctcaa 513 ||||||||||| |||||||| ||||||||||||| ||||||||||||||| |||| Sbjct: 1477 gctagtggaatagcatccaacgcatcagcaaatgacctgattgcatactgttcaa 1423
>gb|AY103729.1| Zea mays PCO099347 mRNA sequence Length = 2083 Score = 188 bits (95), Expect = 1e-44 Identities = 227/271 (83%) Strand = Plus / Minus Query: 243 acatcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgc 302 ||||| |||||||| ||||||||||| || ||||| || || ||||||||||| |||||| Sbjct: 1706 acatcgtcgatcttcaggatcatcttcaccacctgggtggcaagcaagatctgttgctgc 1647 Query: 303 ttgccgatcagagtctcgaaaacattctgctctttcatgtcgttggtaccaacatcattg 362 ||||| ||||| |||||||| || ||||| |||||||||||| |||| ||||| || ||| Sbjct: 1646 ttgccaatcagggtctcgaagacgttctgttctttcatgtcggtggtgccaacgtcgttg 1587 Query: 363 caatcgatgccacagcgggaattgttctccttgacgtgttgagattttacgacggtgaga 422 || || ||||| ||| ||| ||| |||||||||| ||||||| |||||| | || | Sbjct: 1586 cagtctatgccgcagtgggggttgctctccttgacttgttgagcttttaccgcagttaag 1527 Query: 423 gtatcaataggtgccaaaccactgttttcagctaaagctagtggaatggcatccaaagca 482 |||||||| |||| ||||||||||||||| || || |||||||||| ||||| || ||| Sbjct: 1526 gtatcaattggtgacaaaccactgttttcggccaacgctagtggaacagcatctaatgca 1467 Query: 483 tcagcaaatgccctgattgcatactgctcaa 513 ||||| |||| |||||| ||||||||||||| Sbjct: 1466 tcagcgaatgacctgatagcatactgctcaa 1436
>gb|BT017463.1| Zea mays clone EL01N0407F08.c mRNA sequence Length = 710 Score = 176 bits (89), Expect = 5e-41 Identities = 221/265 (83%) Strand = Plus / Minus Query: 249 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 308 |||||||| ||||||||||| || ||||| ||||| |||| |||||||||||||||||| Sbjct: 379 tcgatcttcaggatcatcttcaccacctgagttgctagcaggatctgctgctgcttgcca 320 Query: 309 atcagagtctcgaaaacattctgctctttcatgtcgttggtaccaacatcattgcaatcg 368 ||||| ||||| || || ||||||||||||||||||||||| || ||||| ||||| || Sbjct: 319 atcagggtctcaaagacgttctgctctttcatgtcgttggtgcctacatcgttgcagtct 260 Query: 369 atgccacagcgggaattgttctccttgacgtgttgagattttacgacggtgagagtatca 428 ||||| ||| ||| ||| ||||||| || || |||| |||||| | || | |||||| Sbjct: 259 atgccgcagtgggggttgctctccttaacttgctgagcttttaccgccgtcaaggtatca 200 Query: 429 ataggtgccaaaccactgttttcagctaaagctagtggaatggcatccaaagcatcagca 488 || || | |||||||||||||||||| || |||||||||| ||||| || |||||||| Sbjct: 199 attggcgacaaaccactgttttcagccaaggctagtggaacagcatctaatgcatcagcg 140 Query: 489 aatgccctgattgcatactgctcaa 513 |||| |||||| || |||||||||| Sbjct: 139 aatgacctgatagcgtactgctcaa 115
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 141 bits (71), Expect = 3e-30 Identities = 137/159 (86%) Strand = Plus / Plus Query: 219 catcaatactcggaaggcgttataacatcatcgatcttgaggatcatcttgacaacctgt 278 |||||||| || ||||||| |||||||||||||||||||| |||||||| || ||||| Sbjct: 21250809 catcaatagtcagaaggcgagataacatcatcgatcttgagaatcatcttcaccacctgg 21250868 Query: 279 gttgccagcaagatctgctgctgcttgccgatcagagtctcgaaaacattctgctctttc 338 |||||||| |||||||||||||||||||| ||||| || || |||||||| || || ||| Sbjct: 21250869 gttgccagtaagatctgctgctgcttgcctatcagtgtttcaaaaacattttgttccttc 21250928 Query: 339 atgtcgttggtaccaacatcattgcaatcgatgccacag 377 |||| ||| || |||||||| ||||| || ||||||||| Sbjct: 21250929 atgtggtttgtcccaacatcgttgcagtcaatgccacag 21250967 Score = 117 bits (59), Expect = 4e-23 Identities = 98/111 (88%) Strand = Plus / Plus Query: 399 tgttgagattttacgacggtgagagtatcaataggtgccaaaccactgttttcagctaaa 458 |||||||||||||| | || || ||||||||||| | ||||||||||||||| || || Sbjct: 21251268 tgttgagattttactgctgtcagtgtatcaataggagacaaaccactgttttcggccaag 21251327 Query: 459 gctagtggaatggcatccaaagcatcagcaaatgccctgattgcatactgc 509 ||||||||||| |||||||| ||||||||||||| |||||||||||||||| Sbjct: 21251328 gctagtggaatagcatccaacgcatcagcaaatgacctgattgcatactgc 21251378
>dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0656E03 Length = 181786 Score = 141 bits (71), Expect = 3e-30 Identities = 137/159 (86%) Strand = Plus / Plus Query: 219 catcaatactcggaaggcgttataacatcatcgatcttgaggatcatcttgacaacctgt 278 |||||||| || ||||||| |||||||||||||||||||| |||||||| || ||||| Sbjct: 46185 catcaatagtcagaaggcgagataacatcatcgatcttgagaatcatcttcaccacctgg 46244 Query: 279 gttgccagcaagatctgctgctgcttgccgatcagagtctcgaaaacattctgctctttc 338 |||||||| |||||||||||||||||||| ||||| || || |||||||| || || ||| Sbjct: 46245 gttgccagtaagatctgctgctgcttgcctatcagtgtttcaaaaacattttgttccttc 46304 Query: 339 atgtcgttggtaccaacatcattgcaatcgatgccacag 377 |||| ||| || |||||||| ||||| || ||||||||| Sbjct: 46305 atgtggtttgtcccaacatcgttgcagtcaatgccacag 46343 Score = 117 bits (59), Expect = 4e-23 Identities = 98/111 (88%) Strand = Plus / Plus Query: 399 tgttgagattttacgacggtgagagtatcaataggtgccaaaccactgttttcagctaaa 458 |||||||||||||| | || || ||||||||||| | ||||||||||||||| || || Sbjct: 46644 tgttgagattttactgctgtcagtgtatcaataggagacaaaccactgttttcggccaag 46703 Query: 459 gctagtggaatggcatccaaagcatcagcaaatgccctgattgcatactgc 509 ||||||||||| |||||||| ||||||||||||| |||||||||||||||| Sbjct: 46704 gctagtggaatagcatccaacgcatcagcaaatgacctgattgcatactgc 46754
>gb|AF097668.1|AF097668 Mesembryanthemum crystallinum T-complex protein 1 epsilon subunit (TCP-1-EPSILON) mRNA, partial cds Length = 1458 Score = 107 bits (54), Expect = 4e-20 Identities = 141/170 (82%) Strand = Plus / Minus Query: 240 ataacatcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgc 299 ||||||||||||||||| | |||||||| |||||||| || |||||||| | ||| ||| Sbjct: 1238 ataacatcatcgatcttcaaaatcatcttcacaacctgagtagccagcaaaagctgttgc 1179 Query: 300 tgcttgccgatcagagtctcgaaaacattctgctctttcatgtcgttggtaccaacatca 359 | ||| || |||| |||||||||||||||||||| ||||||||| || |||||||| Sbjct: 1178 ttctttccaatcaatgtctcgaaaacattctgctcacgcatgtcgtttgtgccaacatcg 1119 Query: 360 ttgcaatcgatgccacagcgggaattgttctccttgacgtgttgagattt 409 ||||| || || ||||||| | |||||||||||| || || |||||||| Sbjct: 1118 ttgcagtctataccacagcatggattgttctccttaacttgctgagattt 1069 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 474 tccaaagcatcagcaaatgccctgattgcatactgctcaa 513 ||||||||||||||||| |||||||| ||||| ||||||| Sbjct: 1004 tccaaagcatcagcaaaggccctgatggcatattgctcaa 965
>gb|AC141435.28| Medicago truncatula clone mth2-21i11, complete sequence Length = 132497 Score = 93.7 bits (47), Expect = 5e-16 Identities = 113/135 (83%) Strand = Plus / Minus Query: 240 ataacatcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgc 299 ||||||||||| || || | |||||||||||||| || || || ||||||||||| ||| Sbjct: 107610 ataacatcatcaatttttaatatcatcttgacaacttgagtagcaagcaagatctgttgc 107551 Query: 300 tgcttgccgatcagagtctcgaaaacattctgctctttcatgtcgttggtaccaacatca 359 ||||| ||||||| ||| || || || || ||||| ||||||| ||||| ||||||||| Sbjct: 107550 tgctttccgatcaaagtttcaaagacgttttgctccctcatgtcattggtgccaacatca 107491 Query: 360 ttgcaatcgatgcca 374 |||||||| |||||| Sbjct: 107490 ttgcaatcaatgcca 107476 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 474 tccaaagcatcagcaaatgccctgattgcatactgc 509 ||||||||||| ||||||| || |||||||||||| Sbjct: 107245 tccaaagcatccccaaatgctctaattgcatactgc 107210
>emb|CT030174.3| M.truncatula DNA sequence from clone MTH2-71J12 on chromosome 3, complete sequence Length = 133240 Score = 93.7 bits (47), Expect = 5e-16 Identities = 113/135 (83%) Strand = Plus / Plus Query: 240 ataacatcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgc 299 ||||||||||| || || | |||||||||||||| || || || ||||||||||| ||| Sbjct: 96253 ataacatcatcaatttttaatatcatcttgacaacttgagtagcaagcaagatctgttgc 96312 Query: 300 tgcttgccgatcagagtctcgaaaacattctgctctttcatgtcgttggtaccaacatca 359 ||||| ||||||| ||| || || || || ||||| ||||||| ||||| ||||||||| Sbjct: 96313 tgctttccgatcaaagtttcaaagacgttttgctccctcatgtcattggtgccaacatca 96372 Query: 360 ttgcaatcgatgcca 374 |||||||| |||||| Sbjct: 96373 ttgcaatcaatgcca 96387 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 474 tccaaagcatcagcaaatgccctgattgcatactgc 509 ||||||||||| ||||||| || |||||||||||| Sbjct: 96618 tccaaagcatccccaaatgctctaattgcatactgc 96653
>emb|X85013.1|CSRNATCP1 C.sativus mRNA for T-complex polypeptide 1 Length = 2030 Score = 67.9 bits (34), Expect = 3e-08 Identities = 136/170 (80%) Strand = Plus / Minus Query: 243 acatcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgc 302 |||||||| ||||| || |||||||| || ||||| |||||||| || ||||| || ||| Sbjct: 1630 acatcatcaatcttcagaatcatcttcacgacctgagttgccagtaaaatctgttgttgc 1571 Query: 303 ttgccgatcagagtctcgaaaacattctgctctttcatgtcgttggtaccaacatcattg 362 || ||||||| |||||| || || || ||||| ||||||| || || |||| ||||||| Sbjct: 1570 ttaccgatcaaagtctcaaatacgttttgctccctcatgtcatttgtgccaatatcattg 1511 Query: 363 caatcgatgccacagcgggaattgttctccttgacgtgttgagattttac 412 || || || ||||| | |||||||||||| | || ||||||||||| Sbjct: 1510 cagtcaattccacaataaggattgttctccttaatttgctgagattttac 1461 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 474 tccaaagcatcagcaaatgccctgattgcatactgctcaa 513 |||| |||||||||||||||||| || ||||||||||||| Sbjct: 1399 tccagagcatcagcaaatgccctaatagcatactgctcaa 1360
>emb|CR734406.2|CNS0GTG5 Tetraodon nigroviridis full-length cDNA Length = 275 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 249 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 308 |||||||| |||||||||||||| || || || || |||| ||| ||||||| |||||| Sbjct: 95 tcgatctttaggatcatcttgacgacttgggtggcgagcaggatttgctgctttttgccg 36 Query: 309 atcagagtctcga 321 ||||| ||||||| Sbjct: 35 atcagggtctcga 23
>emb|CR734368.2|CNS0GTF3 Tetraodon nigroviridis full-length cDNA Length = 1888 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 249 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 308 |||||||| |||||||||||||| || || || || |||| ||| ||||||| |||||| Sbjct: 1708 tcgatctttaggatcatcttgacgacttgggtggcgagcaggatttgctgctttttgccg 1649 Query: 309 atcagagtctcga 321 ||||| ||||||| Sbjct: 1648 atcagggtctcga 1636
>emb|CR704636.2|CNS0G6NC Tetraodon nigroviridis full-length cDNA Length = 1816 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 249 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 308 |||||||| |||||||||||||| || || || || |||| ||| ||||||| |||||| Sbjct: 1697 tcgatctttaggatcatcttgacgacttgggtggcgagcaggatttgctgctttttgccg 1638 Query: 309 atcagagtctcga 321 ||||| ||||||| Sbjct: 1637 atcagggtctcga 1625
>emb|CR702647.2|CNS0G543 Tetraodon nigroviridis full-length cDNA Length = 1848 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 249 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 308 |||||||| |||||||||||||| || || || || |||| ||| ||||||| |||||| Sbjct: 1676 tcgatctttaggatcatcttgacgacttgggtggcgagcaggatttgctgctttttgccg 1617 Query: 309 atcagagtctcga 321 ||||| ||||||| Sbjct: 1616 atcagggtctcga 1604
>emb|CR693702.2|CNS0FY7M Tetraodon nigroviridis full-length cDNA Length = 1102 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 249 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 308 |||||||| |||||||||||||| || || || || |||| ||| ||||||| |||||| Sbjct: 918 tcgatctttaggatcatcttgacgacttgggtggcgagcaggatttgctgctttttgccg 859 Query: 309 atcagagtctcga 321 ||||| ||||||| Sbjct: 858 atcagggtctcga 846
>emb|CR693121.2|CNS0FXRH Tetraodon nigroviridis full-length cDNA Length = 1851 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 249 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 308 |||||||| |||||||||||||| || || || || |||| ||| ||||||| |||||| Sbjct: 1691 tcgatctttaggatcatcttgacgacttgggtggcgagcaggatttgctgctttttgccg 1632 Query: 309 atcagagtctcga 321 ||||| ||||||| Sbjct: 1631 atcagggtctcga 1619
>emb|CR692993.2|CNS0FXNX Tetraodon nigroviridis full-length cDNA Length = 1013 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 249 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 308 |||||||| |||||||||||||| || || || || |||| ||| ||||||| |||||| Sbjct: 830 tcgatctttaggatcatcttgacgacttgggtggcgagcaggatttgctgctttttgccg 771 Query: 309 atcagagtctcga 321 ||||| ||||||| Sbjct: 770 atcagggtctcga 758
>emb|CR682065.2|CNS0FP8D Tetraodon nigroviridis full-length cDNA Length = 1001 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 249 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 308 |||||||| |||||||||||||| || || || || |||| ||| ||||||| |||||| Sbjct: 824 tcgatctttaggatcatcttgacgacttgggtggcgagcaggatttgctgctttttgccg 765 Query: 309 atcagagtctcga 321 ||||| ||||||| Sbjct: 764 atcagggtctcga 752
>emb|CR664385.2|CNS0FBLZ Tetraodon nigroviridis full-length cDNA Length = 1196 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 249 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 308 |||||||| |||||||||||||| || || || || |||| ||| ||||||| |||||| Sbjct: 1013 tcgatctttaggatcatcttgacgacttgggtggcgagcaggatttgctgctttttgccg 954 Query: 309 atcagagtctcga 321 ||||| ||||||| Sbjct: 953 atcagggtctcga 941
>emb|CR659491.2|CNS0F7U1 Tetraodon nigroviridis full-length cDNA Length = 1879 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 249 tcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttgccg 308 |||||||| |||||||||||||| || || || || |||| ||| ||||||| |||||| Sbjct: 1703 tcgatctttaggatcatcttgacgacttgggtggcgagcaggatttgctgctttttgccg 1644 Query: 309 atcagagtctcga 321 ||||| ||||||| Sbjct: 1643 atcagggtctcga 1631
>ref|XM_774923.1| PREDICTED: Strongylocentrotus purpuratus similar to chaperonin containing TCP1, subunit 5 (epsilon), transcript variant 1 (LOC575808), mRNA Length = 2235 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 290 gatctgctgctgcttgccgatcagagtctcgaaaacattctgctctttcatgtcgttggt 349 |||||| |||| |||||| ||||||||||| || |||| |||||| |||||||| ||||| Sbjct: 1650 gatctgttgcttcttgccaatcagagtctcaaacacatgctgctccttcatgtcattggt 1591
>ref|XM_796613.1| PREDICTED: Strongylocentrotus purpuratus similar to chaperonin containing TCP1, subunit 5 (epsilon), transcript variant 2 (LOC575808), mRNA Length = 2250 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 290 gatctgctgctgcttgccgatcagagtctcgaaaacattctgctctttcatgtcgttggt 349 |||||| |||| |||||| ||||||||||| || |||| |||||| |||||||| ||||| Sbjct: 1665 gatctgttgcttcttgccaatcagagtctcaaacacatgctgctccttcatgtcattggt 1606
>gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete sequence Length = 187707 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttg 305 ||||| |||||||| ||||| || || ||||| |||| ||||| |||||||||||||||| Sbjct: 15677 tcatcaatcttgagaatcattttcaccacctgagttgtcagcacgatctgctgctgcttg 15618 Score = 48.1 bits (24), Expect = 0.028 Identities = 39/44 (88%) Strand = Plus / Minus Query: 423 gtatcaataggtgccaaaccactgttttcagctaaagctagtgg 466 ||||||| ||| | |||||||||||||||||||| |||||||| Sbjct: 15159 gtatcaaaagggggcaaaccactgttttcagctagggctagtgg 15116
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttg 305 ||||| |||||||| ||||| || || ||||| |||| ||||| |||||||||||||||| Sbjct: 22011133 tcatcaatcttgagaatcattttcaccacctgagttgtcagcacgatctgctgctgcttg 22011074 Score = 48.1 bits (24), Expect = 0.028 Identities = 39/44 (88%) Strand = Plus / Minus Query: 423 gtatcaataggtgccaaaccactgttttcagctaaagctagtgg 466 ||||||| ||| | |||||||||||||||||||| |||||||| Sbjct: 22010615 gtatcaaaagggggcaaaccactgttttcagctagggctagtgg 22010572
>dbj|AK106739.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-B02, full insert sequence Length = 1961 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttg 305 ||||| |||||||| ||||| || || ||||| |||| ||||| |||||||||||||||| Sbjct: 388 tcatcaatcttgagaatcattttcaccacctgagttgtcagcacgatctgctgctgcttg 329 Score = 48.1 bits (24), Expect = 0.028 Identities = 39/44 (88%) Strand = Plus / Minus Query: 423 gtatcaataggtgccaaaccactgttttcagctaaagctagtgg 466 ||||||| ||| | |||||||||||||||||||| |||||||| Sbjct: 196 gtatcaaaagggggcaaaccactgttttcagctagggctagtgg 153
>dbj|AK070073.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043F15, full insert sequence Length = 3156 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttg 305 ||||| |||||||| ||||| || || ||||| |||| ||||| |||||||||||||||| Sbjct: 2027 tcatcaatcttgagaatcattttcaccacctgagttgtcagcacgatctgctgctgcttg 1968 Score = 48.1 bits (24), Expect = 0.028 Identities = 39/44 (88%) Strand = Plus / Minus Query: 423 gtatcaataggtgccaaaccactgttttcagctaaagctagtgg 466 ||||||| ||| | |||||||||||||||||||| |||||||| Sbjct: 1835 gtatcaaaagggggcaaaccactgttttcagctagggctagtgg 1792
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttg 305 ||||| |||||||| ||||| || || ||||| |||| ||||| |||||||||||||||| Sbjct: 22022796 tcatcaatcttgagaatcattttcaccacctgagttgtcagcacgatctgctgctgcttg 22022737 Score = 48.1 bits (24), Expect = 0.028 Identities = 39/44 (88%) Strand = Plus / Minus Query: 423 gtatcaataggtgccaaaccactgttttcagctaaagctagtgg 466 ||||||| ||| | |||||||||||||||||||| |||||||| Sbjct: 22022278 gtatcaaaagggggcaaaccactgttttcagctagggctagtgg 22022235
>ref|XM_635364.1| Dictyostelium discoideum hypothetical protein (DDB0204244), partial mRNA Length = 1617 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 440 accactgttttcagctaaagctagtggaatggcatccaaagcatcagcaaa 490 |||||| |||||||| || |||| |||||| ||||| |||||||||||||| Sbjct: 1389 accactattttcagccaatgctaatggaatagcatctaaagcatcagcaaa 1339
>emb|BX064596.1|CNS09M08 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC46DG05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 888 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 300 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 345 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 399
>emb|BX059609.1|CNS09I5P Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC4CB08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 668 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 300 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 544 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 490
>emb|BX058534.1|CNS09HBU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC39AA01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1000 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 300 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 384 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 438
>emb|BX058090.1|CNS09GZI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC38BC04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 862 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 300 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 416 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 470
>emb|BX047036.1|CNS098GG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC21AB01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 592 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 300 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 351 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 405
>emb|BX042897.1|CNS0959H Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC15AE11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 686 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 300 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 358 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 412
>emb|BX037203.1|CNS090VB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA9CC07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 615 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 300 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 404 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 458
>emb|BX032800.1|CNS08XH0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA48DF12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 470 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 300 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 341 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 395
>emb|BX022454.1|CNS08PHM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA34BE07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 896 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 300 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 360 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 414
>emb|BX025429.1|CNS08RS9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA39AA11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 889 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 300 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 161 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 215
>emb|BX025374.1|CNS08RQQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA38DF11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 977 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 300 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 402 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 456
>emb|BX025373.1|CNS08RQP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA38DF11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1012 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 300 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 671 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 617
>emb|BX015203.1|CNS08JW7 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA22DD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 984 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 300 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 329 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 383
>emb|BX013195.1|CNS08ICF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA2DE08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 985 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 300 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 347 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 401
>emb|BX010233.1|CNS08G25 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA16BH08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 692 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 300 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 670 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 616
>emb|BX009560.1|CNS08FJG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA15BH08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 972 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 300 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 325 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 379
>ref|XM_317219.2| Anopheles gambiae str. PEST ENSANGP00000012024 (ENSANGG00000009535), partial mRNA Length = 1779 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 300 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 1769 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 1715
>ref|XM_307323.1| Anopheles gambiae str. PEST ENSANGP00000001996 (ENSANGG00000001693), partial mRNA Length = 1515 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 300 |||||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 1505 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 1451
>gb|AY398321.1| Danio rerio clone RK074A2D01 chaperonin containing TCP1, subunit 5 (epsilon) (CCT5) mRNA, complete cds Length = 1896 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttg 305 ||||| ||||| || |||||||| ||||| || || ||||| |||||||||||| ||| Sbjct: 1709 tcatcaatcttcagaatcatctttacaacttgagtggccagagagatctgctgcttcttc 1650 Query: 306 ccgatcagagtctcgaaaacattctgctctttcatgtc 343 ||||| || ||||||| |||| ||||| |||||||| Sbjct: 1649 ccgataagggtctcgattacatgctgctgcttcatgtc 1612
>gb|AY648807.1| Danio rerio TCP-1 epsilon mRNA, complete cds Length = 1853 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttg 305 ||||| ||||| || |||||||| ||||| || || ||||| |||||||||||| ||| Sbjct: 1684 tcatcaatcttcagaatcatctttacaacttgagtggccagagagatctgctgcttcttc 1625 Query: 306 ccgatcagagtctcgaaaacattctgctctttcatgtc 343 ||||| || ||||||| |||| ||||| |||||||| Sbjct: 1624 ccgataagggtctcgattacatgctgctgcttcatgtc 1587
>gb|BC068037.1| Danio rerio chaperonin containing TCP1, subunit 5 (epsilon), mRNA (cDNA clone MGC:77639 IMAGE:6996933), complete cds Length = 1879 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttg 305 ||||| ||||| || |||||||| ||||| || || ||||| |||||||||||| ||| Sbjct: 1694 tcatcaatcttcagaatcatctttacaacttgagtggccagagagatctgctgcttcttc 1635 Query: 306 ccgatcagagtctcgaaaacattctgctctttcatgtc 343 ||||| || ||||||| |||| ||||| |||||||| Sbjct: 1634 ccgataagggtctcgattacatgctgctgcttcatgtc 1597
>emb|BX469922.12| Zebrafish DNA sequence from clone DKEY-30N5 in linkage group 24, complete sequence Length = 200409 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttg 305 ||||| ||||| || |||||||| ||||| || || ||||| |||||||||||| ||| Sbjct: 165976 tcatcaatcttcagaatcatctttacaacttgagtggccagagagatctgctgcttcttc 166035 Query: 306 ccgatcagagtctcgaaaacattctgctctttcatgtc 343 ||||| || ||||||| |||| ||||| |||||||| Sbjct: 166036 ccgataagggtctcgattacatgctgctgcttcatgtc 166073
>ref|NM_212613.1| Danio rerio chaperonin containing TCP1, subunit 5 (epsilon) (cct5), mRNA Length = 1896 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgctgcttg 305 ||||| ||||| || |||||||| ||||| || || ||||| |||||||||||| ||| Sbjct: 1709 tcatcaatcttcagaatcatctttacaacttgagtggccagagagatctgctgcttcttc 1650 Query: 306 ccgatcagagtctcgaaaacattctgctctttcatgtc 343 ||||| || ||||||| |||| ||||| |||||||| Sbjct: 1649 ccgataagggtctcgattacatgctgctgcttcatgtc 1612
>emb|BX010234.1|CNS08G26 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA16BH08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 685 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 248 atcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 300 |||||||||||| ||||||||||| | ||| || || |||| ||||||||||| Sbjct: 407 atcgatcttgagaatcatcttgacgagctgggtggcgagcacgatctgctgct 459
>ref|XM_762836.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_549_7513_8304) partial mRNA Length = 792 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagca 288 |||||||||||||||||||| ||| |||||||| ||||||| Sbjct: 593 tcatcgatcttgaggatcatgcggacgacctgtgtggccagca 635
>ref|XM_762838.1| Giardia lamblia ATCC 50803 chaperonin subunit epsilon (GLP_549_9744_8083) partial mRNA Length = 1662 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagca 288 |||||||||||||||||||| ||| |||||||| ||||||| Sbjct: 1640 tcatcgatcttgaggatcatgcggacgacctgtgtggccagca 1598
>emb|BX024353.1|CNS08QYD Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA37AE10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 608 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Plus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagcaagatctgctgct 300 |||||||||||||| ||||||||||| | ||| || || |||| | ||||||||| Sbjct: 339 tcatcgatcttgagaatcatcttgacgagctgggtggcgagcacgttctgctgct 393
>emb|AJ851489.1| Gallus gallus mRNA for hypothetical protein, clone 3n20 Length = 1819 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 474 tccaaagcatcagcaaatgccctgattgcatactg 508 ||||| ||||| ||||||||||| ||||||||||| Sbjct: 1399 tccaaggcatctgcaaatgccctcattgcatactg 1365
>gb|AF226724.1|AF226724 Giardia intestinalis chaperonin subunit epsilon CCTepsilon (Ccte) gene, complete cds Length = 1829 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Minus Query: 246 tcatcgatcttgaggatcatcttgacaacctgtgttgccagca 288 |||||||||||||||||||| ||| |||||||| ||||||| Sbjct: 1730 tcatcgatcttgaggatcatgcggacgacctgtgtggccagca 1688
>ref|NM_001012563.1| Gallus gallus chaperonin containing TCP1, subunit 5 (epsilon) (CCT5), mRNA Length = 1819 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 474 tccaaagcatcagcaaatgccctgattgcatactg 508 ||||| ||||| ||||||||||| ||||||||||| Sbjct: 1399 tccaaggcatctgcaaatgccctcattgcatactg 1365
>ref|NM_102295.3| Arabidopsis thaliana ATP binding / protein binding AT1G24510 transcript variant AT1G24510.1 mRNA, complete cds Length = 1906 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Minus Query: 474 tccaaagcatcagcaaatgccctgattgcatactgctc 511 |||||||| || ||||| ||||| |||||||||||||| Sbjct: 1459 tccaaagcttctgcaaacgccctaattgcatactgctc 1422
>ref|NM_202178.1| Arabidopsis thaliana ATP binding / protein binding AT1G24510 transcript variant AT1G24510.2 mRNA, complete cds Length = 2157 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Minus Query: 474 tccaaagcatcagcaaatgccctgattgcatactgctc 511 |||||||| || ||||| ||||| |||||||||||||| Sbjct: 1710 tccaaagcttctgcaaacgccctaattgcatactgctc 1673
>emb|CR699738.2|CNS0G2VA Tetraodon nigroviridis full-length cDNA Length = 1834 Score = 44.1 bits (22), Expect = 0.44 Identities = 62/74 (83%), Gaps = 1/74 (1%) Strand = Plus / Minus Query: 249 tcgatcttgaggatcatct-tgacaacctgtgttgccagcaagatctgctgctgcttgcc 307 |||||||| |||||||||| |||| || || || || |||| ||| ||||||| ||||| Sbjct: 1669 tcgatcttaaggatcatctatgacgacttgggtggcgagcaggatttgctgctttttgcc 1610 Query: 308 gatcagagtctcga 321 |||||| ||||||| Sbjct: 1609 gatcagggtctcga 1596
>gb|BT000818.1| Arabidopsis thaliana T-complex chaperonin protein , epsilon subunit (At1g24510/F21J9_150) mRNA, complete cds Length = 1608 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Minus Query: 474 tccaaagcatcagcaaatgccctgattgcatactgctc 511 |||||||| || ||||| ||||| |||||||||||||| Sbjct: 1355 tccaaagcttctgcaaacgccctaattgcatactgctc 1318
>emb|BX033735.1|CNS08Y6Z Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA5BD07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 707 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 246 tcatcgatcttgaggatcatcttgac 271 |||||||||||||| ||||||||||| Sbjct: 330 tcatcgatcttgagaatcatcttgac 355
>emb|BX025983.1|CNS08S7N Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA4AC06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 148 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 246 tcatcgatcttgaggatcatcttgac 271 |||||||||||||| ||||||||||| Sbjct: 79 tcatcgatcttgagaatcatcttgac 104
>gb|AY075611.1| Arabidopsis thaliana At1g24510/F21J9_150 mRNA, complete cds Length = 1885 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Minus Query: 474 tccaaagcatcagcaaatgccctgattgcatactgctc 511 |||||||| || ||||| ||||| |||||||||||||| Sbjct: 1459 tccaaagcttctgcaaacgccctaattgcatactgctc 1422
>emb|BX815337.1|CNS0AAT9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS53ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2067 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Minus Query: 474 tccaaagcatcagcaaatgccctgattgcatactgctc 511 |||||||| || ||||| ||||| |||||||||||||| Sbjct: 1714 tccaaagcttctgcaaacgccctaattgcatactgctc 1677
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 ttcatgtcgttggtaccaaca 356 ||||||||||||||||||||| Sbjct: 4018074 ttcatgtcgttggtaccaaca 4018094
>emb|AL135789.18| Human DNA sequence from clone RP11-412H14 on chromosome 9q32-33.3 Contains the 5' end of one variant of the AKAP2 (PALM2) gene for A kinase (PRKA) anchor protein 2 (paralemmin 2) and a CpG island, complete sequence Length = 133394 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 agcatcagcaaatgccctgat 499 ||||||||||||||||||||| Sbjct: 25332 agcatcagcaaatgccctgat 25352
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 293 ctgctgctgcttgccgatcag 313 ||||||||||||||||||||| Sbjct: 31442963 ctgctgctgcttgccgatcag 31442983
>gb|AC092660.2| Homo sapiens BAC clone RP11-502A5 from 2, complete sequence Length = 154704 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 278 tgttgccagcaagatctgctg 298 ||||||||||||||||||||| Sbjct: 104641 tgttgccagcaagatctgctg 104621
>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078N11 Length = 155168 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 293 ctgctgctgcttgccgatcag 313 ||||||||||||||||||||| Sbjct: 78360 ctgctgctgcttgccgatcag 78380
>gb|AY377120.1| Liparthrum semidegener isolate sem-Madeira elongation factor 1-alpha (EF-1alpha) gene, partial cds Length = 889 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 526 gaatggcatccaaagcatca 507
>gb|AY377081.1| Liparthrum canum isolate can-LaGomera elongation factor 1-alpha (EF-1alpha) gene, partial cds Length = 885 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 526 gaatggcatccaaagcatca 507
>gb|AY377073.1| Liparthrum artemisiae isolate art-Tenerife elongation factor 1-alpha (EF-1alpha) gene, partial cds Length = 890 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 526 gaatggcatccaaagcatca 507
>gb|AY377072.1| Liparthrum artemisiae isolate art-LaGomera elongation factor 1-alpha (EF-1alpha) gene, partial cds Length = 890 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 526 gaatggcatccaaagcatca 507
>gb|AY377067.1| Liparthrum bartschti elongation factor 1-alpha (EF-1alpha) gene, partial cds Length = 762 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 474 gaatggcatccaaagcatca 455
>gb|DQ141315.1| Xyleborus amputatus elongation factor 1-alpha (EF-1a) gene, partial cds Length = 716 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 592 gaatggcatccaaagcatca 573
>emb|AL590138.7| Human DNA sequence from clone RP11-243A2 on chromosome 1 Contains part of the PLXNA2 gene for plexin A2, complete sequence Length = 164057 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 ccagcaagatctgctgctgcttgc 306 ||||||| |||||||||||||||| Sbjct: 116407 ccagcaacatctgctgctgcttgc 116430
>gb|AY131133.1| Diocalandra frumenti elongation factor 1-alpha gene, partial cds Length = 906 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 538 gaatggcatccaaagcatca 519
>gb|AF508886.1| Xylosandrus sp. nov (cf. ursa) elongation factor 1-alpha (EF-1a) gene, partial cds Length = 949 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 555 gaatggcatccaaagcatca 536
>gb|AF508882.1| Webbia cf. platypoides elongation factor 1-alpha (EF-1a) gene, partial cds Length = 933 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 539 gaatggcatccaaagcatca 520
>gb|AF508869.1| Ambrosiodmus compressus elongation factor 1-alpha (EF-1a) gene, partial cds Length = 863 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 497 gaatggcatccaaagcatca 478
>emb|AJ243431.1|ALW243431 Acinetobacter lwoffii wzc, wzb, wza, weeA, weeB, wceC, wzx, wzy, weeD, weeE, weeF, weeG, weeH, weeI, weeJ, weeK, galU, ugd, pgi, galE, pgm (partial) and mip (partial) genes (emulsan biosynthetic gene cluster), strain RAG-1 Length = 26953 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tccaaagcatcagcaaatgc 493 |||||||||||||||||||| Sbjct: 16544 tccaaagcatcagcaaatgc 16525
>gb|AF444076.1| Coccotrypes advena isolate Dry20 elongation factor 1-alpha (EF-1a) gene, partial cds Length = 937 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 556 gaatggcatccaaagcatca 537
>gb|AF444074.1| Coccotrypes cyperi elongation factor 1-alpha (EF-1a) gene, partial cds Length = 945 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 555 gaatggcatccaaagcatca 536
>gb|AF444071.1| Coccotrypes cf. rhizophorae elongation factor 1-alpha (EF-1a) gene, partial cds Length = 922 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 534 gaatggcatccaaagcatca 515
>gb|AF439740.1| Ozopemon uniseriatus elongation factor 1-alpha (EF-1a) gene, partial cds Length = 912 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 535 gaatggcatccaaagcatca 516
>gb|AF308414.1| Liparthrum nigrescens elongation factor 1 alpha (ef-1a) gene, partial cds Length = 955 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 532 gaatggcatccaaagcatca 513
>gb|AF308412.1| Hylesinopsis sp. HLH11 elongation factor 1 alpha (ef-1a) gene, partial cds Length = 910 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 551 gaatggcatccaaagcatca 532
>gb|AF308411.1| Alniphagus aspericollis elongation factor 1 alpha (ef-1a) gene, partial cds Length = 746 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 412 gaatggcatccaaagcatca 393
>gb|AF186693.2| Xylosandrus mancus elongation factor 1 alpha (ef-1a) gene, partial cds Length = 921 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AF186675.1| Ips perturbatus elongation factor 1 alpha (ef-1a) gene, partial cds Length = 914 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 529 gaatggcatccaaagcatca 510
>gb|AF186673.1| Pityokteines minutus elongation factor 1 alpha (ef-1a) gene, partial cds Length = 913 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 529 gaatggcatccaaagcatca 510
>gb|AF186671.1| Araptus sp. SCH05 elongation factor 1 alpha (ef-1a) gene, partial cds Length = 909 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 529 gaatggcatccaaagcatca 510
>gb|AF186661.2| Dryocoetes affaber elongation factor 1 alpha (ef-1a) gene, partial cds Length = 889 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 535 gaatggcatccaaagcatca 516
>gb|AF186660.2| Dryoxylon onoharaensum elongation factor 1 alpha (ef-1a) gene, partial cds Length = 754 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 514 gaatggcatccaaagcatca 495
>gb|AC007155.16| Arabidopsis thaliana chromosome 2 clone T18E17 map PR1, complete sequence Length = 96095 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 agatctgctgctgcttgccgatca 312 ||||||||||||||| |||||||| Sbjct: 27576 agatctgctgctgctcgccgatca 27553
>gb|AC006437.5| Arabidopsis thaliana chromosome 2 clone T19K21 map mi421, complete sequence Length = 76713 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 agatctgctgctgcttgccgatca 312 ||||||||||||||| |||||||| Sbjct: 71220 agatctgctgctgctcgccgatca 71197
>gb|AF397647.1| Pityokteines sparsus elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 688 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397640.1| Ips woodi elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 687 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397638.1| Ips tridens elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 689 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397636.1| Ips pini elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 686 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397635.1| Ips pilifrons elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 689 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397634.1| Ips plastographus elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 687 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397633.1| Ips perturbatus elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 689 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397632.1| Ips perroti elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 689 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397631.1| Ips paraconfusus elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 689 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397630.1| Ips montanus elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 689 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397629.1| Ips lecontei elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 691 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397627.1| Ips integer elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 687 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397626.1| Ips hunteri elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 689 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397624.1| Ips grandicollis elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 689 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397621.1| Ips cribricollis elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 688 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397620.1| Ips confusus elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 689 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397619.1| Ips cembrae elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 687 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397618.1| Ips calligraphus elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 688 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397617.1| Ips borealis elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 687 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397615.1| Ips avulsus elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 687 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397614.1| Ips apache elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 688 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF397613.1| Ips amitinus elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 420 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 228 gaatggcatccaaagcatca 209
>gb|AF397612.1| Ips acuminatus elongation factor 1 alpha (EF-1alpha) gene, partial cds Length = 689 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 500 gaatggcatccaaagcatca 481
>gb|AF259884.1| Webbia bicornis elongation factor 1 alpha (ef-1a) gene, partial cds Length = 915 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 529 gaatggcatccaaagcatca 510
>gb|AF259882.1| Webbia quattuordecimspinatus elongation factor 1 alpha (ef-1a) gene, partial cds Length = 862 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 550 gaatggcatccaaagcatca 531
>gb|AF259877.1| Ambrosiodmus aegir elongation factor 1 alpha (ef-1a) gene, partial cds Length = 931 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 550 gaatggcatccaaagcatca 531
>gb|AF259875.1| Coccotrypes medius elongation factor 1 alpha (ef-1a) gene, partial cds Length = 885 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 502 gaatggcatccaaagcatca 483
>gb|AF259873.1| Dryocoetes autographus elongation factor 1 alpha (ef-1a) gene, partial cds Length = 889 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 508 gaatggcatccaaagcatca 489
>gb|AF259871.1| Coccotrypes longior elongation factor 1 alpha (ef-1a) gene, partial cds Length = 922 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 538 gaatggcatccaaagcatca 519
>gb|AF259870.1| Ozopemon brownei elongation factor 1 alpha (ef-1a) gene, partial cds Length = 933 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 550 gaatggcatccaaagcatca 531
>gb|AF259868.1| Coccotrypes advena elongation factor 1 alpha (ef-1a) gene, partial cds Length = 933 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 550 gaatggcatccaaagcatca 531
>gb|AF259867.1| Coccotrypes gedeanus elongation factor 1 alpha (ef-1a) gene, partial cds Length = 925 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 550 gaatggcatccaaagcatca 531
>gb|AF308432.1| Scolytodes parvulus elongation factor 1 alpha (ef-1a) gene, partial cds Length = 962 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AF308428.1| Dendroctonus ponderosae elongation factor 1 alpha (ef-1a) gene, partial cds Length = 922 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 553 gaatggcatccaaagcatca 534
>gb|AF308427.1| Dendroctonus murrayanae elongation factor 1 alpha (ef-1a) gene, partial cds Length = 890 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 526 gaatggcatccaaagcatca 507
>gb|AF308425.1| Dendroctonus jeffreyi elongation factor 1 alpha (ef-1a) gene, partial cds Length = 944 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 556 gaatggcatccaaagcatca 537
>gb|AF308423.1| Dendroctonus adjunctus isolate hlt12 elongation factor 1 alpha (ef-1a) gene, partial cds Length = 925 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 547 gaatggcatccaaagcatca 528
>gb|AF308401.1| Hylesinopsis sp. HLD02 elongation factor 1 alpha (ef-1a) gene, partial cds Length = 927 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AF375274.1| Gnathotrupes sp. SCL07 elongation factor-1 alpha (ef-1a) gene, partial cds Length = 1004 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 579 gaatggcatccaaagcatca 560
>gb|AF375273.1| Gnathotrupes sp. SCL06 elongation factor-1 alpha (ef-1a) gene, partial cds Length = 1029 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 553 gaatggcatccaaagcatca 534
>gb|AF375264.1| Stenancylus sp. COR01 elongation factor 1-alpha (ef1a) gene, partial cds Length = 693 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 568 gaatggcatccaaagcatca 549
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 attttacgacggtgagagta 425 |||||||||||||||||||| Sbjct: 610014 attttacgacggtgagagta 610033
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 attttacgacggtgagagta 425 |||||||||||||||||||| Sbjct: 84619 attttacgacggtgagagta 84638
>gb|AY500988.1| Coleobothrus luridus voucher Co12lurT elongation factor 1 alpha (EF1a) gene, partial cds Length = 899 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500987.1| Coleobothrus luridus voucher Co11lurLP elongation factor 1 alpha (EF1a) gene, partial cds Length = 899 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500986.1| Coleobothrus luridus voucher Co10lurLG elongation factor 1 alpha (EF1a) gene, partial cds Length = 899 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500985.1| Coleobothrus luridus voucher Co09lurGC elongation factor 1 alpha (EF1a) gene, partial cds Length = 899 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500982.1| Cisurgus wollastoni voucher Ci11wolLP elongation factor 1 alpha (EF1a) gene, partial cds Length = 899 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500981.1| Cisurgus wollastoni voucher Ci09wolEH elongation factor 1 alpha (EF1a) gene, partial cds Length = 899 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500980.1| Cisurgus occidentalis voucher Ci07occMo elongation factor 1 alpha (EF1a) gene, partial cds Length = 901 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500977.1| Cisurgus wollastoni voucher Ci01wolT elongation factor 1 alpha (EF1a) gene, partial cds Length = 899 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500952.1| Aphanarthrum canariense voucher A61carLP elongation factor 1 alpha (EF1a) gene, partial cds Length = 901 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500926.1| Aphanarthrum mairei voucher A29maiMo elongation factor 1 alpha (EF1a) gene, partial cds Length = 903 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500925.1| Aphanarthrum mairei voucher A28maiMo elongation factor 1 alpha (EF1a) gene, partial cds Length = 903 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500922.1| Aphanarthrum mairei voucher A25maiMo elongation factor 1 alpha (EF1a) gene, partial cds Length = 903 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>gb|AY500920.1| Aphanarthrum canariense voucher A23carLP elongation factor 1 alpha (EF1a) gene, partial cds Length = 917 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gaatggcatccaaagcatca 485 |||||||||||||||||||| Sbjct: 541 gaatggcatccaaagcatca 522
>dbj|AP000999.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-667I23, complete sequence Length = 189892 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 taacacaataaatgtgcacc 167 |||||||||||||||||||| Sbjct: 100507 taacacaataaatgtgcacc 100488
>dbj|AP002853.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-46K15, complete sequence Length = 177463 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 taacacaataaatgtgcacc 167 |||||||||||||||||||| Sbjct: 18067 taacacaataaatgtgcacc 18048
>gb|AC138027.3| Mus musculus BAC clone RP24-100L8 from 12, complete sequence Length = 201839 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 taacacaataaatgtgcacc 167 |||||||||||||||||||| Sbjct: 111526 taacacaataaatgtgcacc 111545 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,414,045 Number of Sequences: 3902068 Number of extensions: 4414045 Number of successful extensions: 73013 Number of sequences better than 10.0: 160 Number of HSP's better than 10.0 without gapping: 159 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 72705 Number of HSP's gapped (non-prelim): 307 length of query: 513 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 490 effective length of database: 17,143,297,704 effective search space: 8400215874960 effective search space used: 8400215874960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
