ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags27f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1EF2_BETVU (O23755) Elongation factor 2 (EF-2) 81 8e-16
2EF2_CHLKE (P28996) Elongation factor 2 (EF-2) 63 2e-10
3EF2_CAEEL (P29691) Elongation factor 2 (EF-2) 55 6e-08
4EF2_CRYPV (Q23716) Elongation factor 2 (EF-2) 54 8e-08
5EF2_CRIGR (P09445) Elongation factor 2 (EF-2) 54 1e-07
6EF2_CHICK (Q90705) Elongation factor 2 (EF-2) 54 1e-07
7EF2_DROME (P13060) Elongation factor 2 (EF-2) 54 1e-07
8EF2_RAT (P05197) Elongation factor 2 (EF-2) 53 2e-07
9EF2_PONPY (Q5R8Z3) Elongation factor 2 (EF-2) 53 2e-07
10EF2_MOUSE (P58252) Elongation factor 2 (EF-2) 53 2e-07
11EF2_MESAU (P05086) Elongation factor 2 (EF-2) 53 2e-07
12EF2_HUMAN (P13639) Elongation factor 2 (EF-2) 53 2e-07
13EF2_BOVIN (Q3SYU2) Elongation factor 2 (EF-2) 52 3e-07
14EF2_SACKL (Q875S0) Elongation factor 2 (EF-2) 52 5e-07
15EF2_SCHPO (O14460) Elongation factor 2 (EF-2) 51 7e-07
16EF2_KLULA (Q6CPQ9) Elongation factor 2 (EF-2) 51 9e-07
17EF2_CANGA (Q6FYA7) Elongation factor 2 (EF-2) 50 1e-06
18EF2_YEAST (P32324) Elongation factor 2 (EF-2) (Translation elong... 50 2e-06
19EF2_SACCA (Q875Z2) Elongation factor 2 (EF-2) 50 2e-06
20EF2_ASHGO (Q754C8) Elongation factor 2 (EF-2) 49 3e-06
21EF2_ENTHI (Q06193) Elongation factor 2 (EF-2) 47 1e-05
22EF2_PICPA (Q874B9) Elongation factor 2 (EF-2) 45 5e-05
23EF2_DEBHA (Q6BJ25) Elongation factor 2 (EF-2) 40 0.002
24EF2_BLAHO (Q17152) Elongation factor 2 (EF-2) 39 0.004
25EF2_CANAL (O13430) Elongation factor 2 (EF-2) 39 0.005
26EF2_NEUCR (Q96X45) Elongation factor 2 (EF-2) (Colonial temperat... 38 0.006
27EF2_DICDI (P15112) Elongation factor 2 (EF-2) 33 0.25
28DNAJ_LEGPN (P50025) Chaperone protein dnaJ 31 0.96
29DNAJ_LEGPL (Q5WV16) Chaperone protein dnaJ 31 0.96
30DNAJ_LEGPH (Q5ZTY4) Chaperone protein dnaJ 31 0.96
31DNAJ_LEGPA (Q5X3M8) Chaperone protein dnaJ 31 0.96
32DNAJ_PASMU (Q9CMS2) Chaperone protein dnaJ 31 0.96
33DNAJ_VIBHA (O87385) Chaperone protein dnaJ 30 1.3
34DNAJ_VIBPA (Q87RX2) Chaperone protein dnaJ 30 1.3
35U5S1_HUMAN (Q15029) 116 kDa U5 small nuclear ribonucleoprotein c... 30 1.6
36U5S1_MOUSE (O08810) 116 kDa U5 small nuclear ribonucleoprotein c... 30 1.6
37DNAJ_PHOPR (Q6LUA6) Chaperone protein dnaJ 30 2.1
38PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type... 29 2.8
39DNAJ_BDEBA (Q6MNG0) Chaperone protein dnaJ 28 4.8
40MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, trac... 28 8.1
41DNAJ_BORBU (P28616) Chaperone protein dnaJ 28 8.1 
>EF2_BETVU (O23755) Elongation factor 2 (EF-2)|
          Length = 843

 Score = 80.9 bits (198), Expect = 8e-16
 Identities = 35/46 (76%), Positives = 43/46 (93%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           QCVFDHW++M SDPL+ G+Q++TLV+ IRKRKGLKEQMTPLS+FED
Sbjct: 796 QCVFDHWEMMPSDPLEAGSQASTLVSVIRKRKGLKEQMTPLSEFED 841
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>EF2_CHLKE (P28996) Elongation factor 2 (EF-2)|
          Length = 845

 Score = 63.2 bits (152), Expect = 2e-10
 Identities = 28/46 (60%), Positives = 34/46 (73%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           QCVFDHW+ M SDP   G+Q+ TLV  IRKRKGLK +   LS++ED
Sbjct: 798 QCVFDHWEAMGSDPTQVGSQANTLVMDIRKRKGLKPEPAALSEYED 843
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>EF2_CAEEL (P29691) Elongation factor 2 (EF-2)|
          Length = 851

 Score = 54.7 bits (130), Expect = 6e-08
 Identities = 23/46 (50%), Positives = 31/46 (67%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           QCVFDHW ++  DPL+ GT+   +V   RKRKGLKE +  L ++ D
Sbjct: 804 QCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDNYLD 849
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>EF2_CRYPV (Q23716) Elongation factor 2 (EF-2)|
          Length = 832

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 21/46 (45%), Positives = 34/46 (73%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           QCVFDHW+++  DPL+ G+++  LV  IR+RK +KE++  L ++ D
Sbjct: 785 QCVFDHWELINGDPLEKGSKTEELVKAIRRRKNIKEEIPALDNYLD 830
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>EF2_CRIGR (P09445) Elongation factor 2 (EF-2)|
          Length = 857

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 23/46 (50%), Positives = 30/46 (65%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           QCVFDHW I+  DP D  ++ + +V   RKRKGLKE +  L +F D
Sbjct: 810 QCVFDHWQILPGDPFDNSSRGSQVVAETRKRKGLKEGIPALDNFLD 855
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>EF2_CHICK (Q90705) Elongation factor 2 (EF-2)|
          Length = 857

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 23/46 (50%), Positives = 30/46 (65%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           QCVFDHW I+  DP D  ++ + +V   RKRKGLKE +  L +F D
Sbjct: 810 QCVFDHWQILPGDPFDSASRPSQVVAETRKRKGLKEGIPALDNFLD 855
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>EF2_DROME (P13060) Elongation factor 2 (EF-2)|
          Length = 843

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 22/46 (47%), Positives = 30/46 (65%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           QCVFDHW ++  DP +P ++   +V   RKRKGLKE +  LS + D
Sbjct: 796 QCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLPDLSQYLD 841
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>EF2_RAT (P05197) Elongation factor 2 (EF-2)|
          Length = 857

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 23/46 (50%), Positives = 30/46 (65%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           QCVFDHW I+  DP D  ++ + +V   RKRKGLKE +  L +F D
Sbjct: 810 QCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLD 855
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>EF2_PONPY (Q5R8Z3) Elongation factor 2 (EF-2)|
          Length = 857

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 23/46 (50%), Positives = 30/46 (65%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           QCVFDHW I+  DP D  ++ + +V   RKRKGLKE +  L +F D
Sbjct: 810 QCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLD 855
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>EF2_MOUSE (P58252) Elongation factor 2 (EF-2)|
          Length = 857

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 23/46 (50%), Positives = 30/46 (65%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           QCVFDHW I+  DP D  ++ + +V   RKRKGLKE +  L +F D
Sbjct: 810 QCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLD 855
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>EF2_MESAU (P05086) Elongation factor 2 (EF-2)|
          Length = 857

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 23/46 (50%), Positives = 30/46 (65%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           QCVFDHW I+  DP D  ++ + +V   RKRKGLKE +  L +F D
Sbjct: 810 QCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLD 855
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>EF2_HUMAN (P13639) Elongation factor 2 (EF-2)|
          Length = 857

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 23/46 (50%), Positives = 30/46 (65%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           QCVFDHW I+  DP D  ++ + +V   RKRKGLKE +  L +F D
Sbjct: 810 QCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLD 855
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>EF2_BOVIN (Q3SYU2) Elongation factor 2 (EF-2)|
          Length = 857

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 23/46 (50%), Positives = 30/46 (65%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           QCVFDHW I+  DP D  ++ + +V   RKRKGLKE +  L +F D
Sbjct: 810 QCVFDHWQILPGDPFDNTSRPSQVVAETRKRKGLKEGIPALDNFLD 855
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>EF2_SACKL (Q875S0) Elongation factor 2 (EF-2)|
          Length = 842

 Score = 51.6 bits (122), Expect = 5e-07
 Identities = 21/46 (45%), Positives = 31/46 (67%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           Q VFDHW  + +DPLDP T++  +VT  RKR G+KE++    ++ D
Sbjct: 795 QMVFDHWATLGTDPLDPTTKAGEIVTAARKRHGMKEEVPGWQEYYD 840
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>EF2_SCHPO (O14460) Elongation factor 2 (EF-2)|
          Length = 842

 Score = 51.2 bits (121), Expect = 7e-07
 Identities = 22/46 (47%), Positives = 30/46 (65%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           Q VFDHW  M+ DPLDP ++   +V   RKRKGLKE +   +++ D
Sbjct: 795 QLVFDHWSPMSGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEYYD 840
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>EF2_KLULA (Q6CPQ9) Elongation factor 2 (EF-2)|
          Length = 842

 Score = 50.8 bits (120), Expect = 9e-07
 Identities = 20/46 (43%), Positives = 31/46 (67%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           Q VFDHW  + +DPLDP T++  +V   RKR+G+KE++    ++ D
Sbjct: 795 QMVFDHWATLGTDPLDPSTKAGEIVLAARKRQGMKEEVPGWQEYYD 840
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>EF2_CANGA (Q6FYA7) Elongation factor 2 (EF-2)|
          Length = 842

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 21/46 (45%), Positives = 31/46 (67%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           Q VFDHW  + SDPLDP +++  +VT  RKR G+KE++    ++ D
Sbjct: 795 QMVFDHWATLNSDPLDPTSKAGEIVTAARKRHGMKEEVPGWQEYYD 840
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>EF2_YEAST (P32324) Elongation factor 2 (EF-2) (Translation elongation factor|
           2) (Eukaryotic elongation factor 2) (eEF2) (Ribosomal
           translocase)
          Length = 842

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 20/46 (43%), Positives = 30/46 (65%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           Q VFDHW  + SDPLDP +++  +V   RKR G+KE++    ++ D
Sbjct: 795 QMVFDHWSTLGSDPLDPTSKAGEIVLAARKRHGMKEEVPGWQEYYD 840
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>EF2_SACCA (Q875Z2) Elongation factor 2 (EF-2)|
          Length = 842

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 21/46 (45%), Positives = 30/46 (65%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           Q VFDHW  + SDPLDP +++  +VT  RKR G+KE +    ++ D
Sbjct: 795 QMVFDHWATLGSDPLDPTSKAGEIVTAARKRHGMKEVVPGWQEYYD 840
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>EF2_ASHGO (Q754C8) Elongation factor 2 (EF-2)|
          Length = 842

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 21/46 (45%), Positives = 29/46 (63%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           Q VFDHW  + +DPLDP T++  +V   RKR GLKE +    ++ D
Sbjct: 795 QMVFDHWATLGTDPLDPTTKAGEIVVEARKRHGLKENVPGWQEYYD 840
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>EF2_ENTHI (Q06193) Elongation factor 2 (EF-2)|
          Length = 840

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 21/46 (45%), Positives = 28/46 (60%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           QCVFDHW ++  D  D  ++  ++V  IRKRKGL E +  L  F D
Sbjct: 793 QCVFDHWQLLNGDVTDATSKVGSIVAAIRKRKGLPEGVPGLDKFYD 838
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>EF2_PICPA (Q874B9) Elongation factor 2 (EF-2)|
          Length = 842

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 19/46 (41%), Positives = 28/46 (60%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           Q VFDHW  M  +PLDP ++   +V   RKR+G+KE +    ++ D
Sbjct: 795 QMVFDHWANMNGNPLDPASKVGEIVLAARKRQGMKENVPGYEEYYD 840
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>EF2_DEBHA (Q6BJ25) Elongation factor 2 (EF-2)|
          Length = 842

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 16/46 (34%), Positives = 27/46 (58%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           Q +FDHW  +  DP DP ++  T+V   R+R+G+K  +    ++ D
Sbjct: 795 QLIFDHWANLNGDPTDPTSKVGTIVKEKRERQGMKPDVPGYEEYYD 840
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>EF2_BLAHO (Q17152) Elongation factor 2 (EF-2)|
          Length = 867

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -2

Query: 254 QCVFDHWDIM-ASDPLDPGTQSATLVTXIRKRKGLKEQM 141
           QCVF HW      DPL  GT++  +V  IR RKGL  ++
Sbjct: 819 QCVFSHWQAYNGGDPLTEGTKTNEMVKSIRNRKGLAPEV 857
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>EF2_CANAL (O13430) Elongation factor 2 (EF-2)|
          Length = 842

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           Q +FDHW +M+ D  D  ++   +V   R R GLK ++   +++ D
Sbjct: 795 QLIFDHWQVMSGDVTDENSKPGAIVKEKRVRAGLKPEVPEYTEYYD 840
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>EF2_NEUCR (Q96X45) Elongation factor 2 (EF-2) (Colonial temperature-sensitive|
           3)
          Length = 844

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = -2

Query: 254 QCVFDHWD-IMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDFED 117
           Q VFDHW+ +    PLD  ++   +V  +RKRKGLK ++    ++ D
Sbjct: 796 QSVFDHWERLPGGSPLDSTSKVGQIVQEMRKRKGLKVEVPGYENYYD 842
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>EF2_DICDI (P15112) Elongation factor 2 (EF-2)|
          Length = 830

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = -2

Query: 254 QCVFDHWDIMASDPLDPGTQSATLVTXIRKRKGLKEQMTPLSDF 123
           QCVFDHW  +     D       L T  RKRKGL  ++  L  F
Sbjct: 773 QCVFDHWASIGVVNKDKKATEVALAT--RKRKGLAPEIPALDKF 814
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>DNAJ_LEGPN (P50025) Chaperone protein dnaJ|
          Length = 379

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
 Frame = -1

Query: 207 PRHPVCDSCDXDPQEEGSQGADDSPIRFRGQAL---NFG*CFATCPCCEG-SRIIFSRCV 40
           PRH  C  C+    ++G+        +  GQ      F     TCP C G  +II   C 
Sbjct: 143 PRHGTCTVCEGSGAKKGTSPKTCETCQGMGQVRIQQGFFSIQQTCPTCHGEGKIISDPCA 202

Query: 39  SC 34
           SC
Sbjct: 203 SC 204
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>DNAJ_LEGPL (Q5WV16) Chaperone protein dnaJ|
          Length = 379

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
 Frame = -1

Query: 207 PRHPVCDSCDXDPQEEGSQGADDSPIRFRGQAL---NFG*CFATCPCCEG-SRIIFSRCV 40
           PRH  C  C+    ++G+        +  GQ      F     TCP C G  +II   C 
Sbjct: 143 PRHGTCTVCEGSGAKKGTSPKTCETCQGMGQVRIQQGFFSIQQTCPTCHGEGKIISDPCA 202

Query: 39  SC 34
           SC
Sbjct: 203 SC 204
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>DNAJ_LEGPH (Q5ZTY4) Chaperone protein dnaJ|
          Length = 379

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
 Frame = -1

Query: 207 PRHPVCDSCDXDPQEEGSQGADDSPIRFRGQAL---NFG*CFATCPCCEG-SRIIFSRCV 40
           PRH  C  C+    ++G+        +  GQ      F     TCP C G  +II   C 
Sbjct: 143 PRHGTCTVCEGSGAKKGTSPKTCETCQGMGQVRIQQGFFSIQQTCPTCHGEGKIISDPCA 202

Query: 39  SC 34
           SC
Sbjct: 203 SC 204
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>DNAJ_LEGPA (Q5X3M8) Chaperone protein dnaJ|
          Length = 379

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
 Frame = -1

Query: 207 PRHPVCDSCDXDPQEEGSQGADDSPIRFRGQAL---NFG*CFATCPCCEG-SRIIFSRCV 40
           PRH  C  C+    ++G+        +  GQ      F     TCP C G  +II   C 
Sbjct: 143 PRHGTCTVCEGSGAKKGTSPKTCETCQGMGQVRIQQGFFSIQQTCPTCHGEGKIISDPCA 202

Query: 39  SC 34
           SC
Sbjct: 203 SC 204
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>DNAJ_PASMU (Q9CMS2) Chaperone protein dnaJ|
          Length = 372

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
 Frame = -1

Query: 192 CDSCDXDPQEEGSQGADDSPIRFRGQALNFG*CFAT---CPCCEGS-RIIFSRCVSC 34
           CDSCD    E+GS+    S     G+       F T   CP C GS + I   C SC
Sbjct: 143 CDSCDGSGAEKGSKVETCSTCHGAGRVRRQQGFFVTEQVCPSCHGSGKKIEKPCKSC 199
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>DNAJ_VIBHA (O87385) Chaperone protein dnaJ|
          Length = 385

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
 Frame = -1

Query: 192 CDSCDXDPQEEGSQGADDSPIRFRGQALNFG*CFA---TCPCCEGSRIIFSRCVSC 34
           CD+CD    ++GS           GQ       FA   TCP C G   I   C  C
Sbjct: 150 CDTCDGSGAKKGSSAETCGTCHGHGQVQMRQGFFAVQQTCPTCHGKGKIIRPCNEC 205
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>DNAJ_VIBPA (Q87RX2) Chaperone protein dnaJ|
          Length = 381

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
 Frame = -1

Query: 192 CDSCDXDPQEEGSQGADDSPIRFRGQALNFG*CFA---TCPCCEG-SRIIFSRCVSC 34
           CDSCD    ++GS           GQ       FA   TCP C G  +II   C  C
Sbjct: 149 CDSCDGSGAKKGSSAETCGTCHGHGQVQMRQGFFAVQQTCPTCHGKGKIIKDPCNEC 205
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>U5S1_HUMAN (Q15029) 116 kDa U5 small nuclear ribonucleoprotein component (U5|
            snRNP-specific protein, 116 kDa) (U5-116 kDa) (Elongation
            factor Tu GTP-binding domain protein 2) (hSNU114)
          Length = 972

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 12/56 (21%)
 Frame = -2

Query: 248  VFDHWDIMASDPLD-----------PGTQSA-TLVTXIRKRKGLKEQMTPLSDFED 117
            VF HW I+  DPLD           P    A   +   R+RKGL E ++    F+D
Sbjct: 900  VFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDD 955
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>U5S1_MOUSE (O08810) 116 kDa U5 small nuclear ribonucleoprotein component (U5|
            snRNP-specific protein, 116 kDa) (U5-116 kDa) (Elongation
            factor Tu GTP-binding domain protein 2)
          Length = 971

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 12/56 (21%)
 Frame = -2

Query: 248  VFDHWDIMASDPLD-----------PGTQSA-TLVTXIRKRKGLKEQMTPLSDFED 117
            VF HW I+  DPLD           P    A   +   R+RKGL E ++    F+D
Sbjct: 899  VFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDD 954
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>DNAJ_PHOPR (Q6LUA6) Chaperone protein dnaJ|
          Length = 380

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
 Frame = -1

Query: 192 CDSCDXDPQEEGSQGADDSPIRFRGQALNFG*CFA---TCPCCEG-SRIIFSRCVSC 34
           CDSCD    + GS          +GQ       FA    CP C G  +II   C SC
Sbjct: 148 CDSCDGSGAKRGSSATTCGTCHGQGQVQMRQGFFAVQQACPHCHGRGKIIKDPCNSC 204
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>PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type 5 precursor|
           (EC 3.4.21.-) (Proprotein convertase PC6-like) (aPC6)
          Length = 1696

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 19/67 (28%), Positives = 29/67 (43%)
 Frame = -1

Query: 210 GPRHPVCDSCDXDPQEEGSQGADDSPIRFRGQALNFG*CFATCPCCEGSRIIFSRCVSCC 31
           GP    C +C  +   + SQ  +     +  Q      C ATC  C GSR    +C++C 
Sbjct: 789 GPDATDCVTCADEDLLQESQCVESCSSGYFQQEYECLKCHATCASCSGSR--DDQCLTCS 846

Query: 30  LYVVLPE 10
            ++ L E
Sbjct: 847 GHLELDE 853
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>DNAJ_BDEBA (Q6MNG0) Chaperone protein dnaJ|
          Length = 371

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
 Frame = -1

Query: 192 CDSCDXDPQEEGSQGADDSPIRFRGQALNFG*CFA---TCPCCEG-SRIIFSRCVSC 34
           CD C     E+GSQ +        GQ +     FA   TCP C G   +I + C  C
Sbjct: 152 CDECKGTGAEKGSQVSTCGTCGGSGQVVRQQGFFAMASTCPTCHGQGTVIKNPCKPC 208
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>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
 Frame = +2

Query: 116  CPRNRIGESSAP*DPSSCGSXSQESQ-----TGCRGPKDQ 220
            CP  ++ +   P  P++C S +Q  Q      GC  P+DQ
Sbjct: 5300 CPPTKVYKPCGPIQPATCNSRNQSPQLEGMAEGCFCPEDQ 5339
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>DNAJ_BORBU (P28616) Chaperone protein dnaJ|
          Length = 364

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = -1

Query: 204 RHPVCDSCDXDPQEEGSQGADDSPIRFRGQALNFG*CF---ATCPCCEG-SRIIFSRCVS 37
           R  +CDSC     E+G+  +  +     G+ +  G  F    TC  C G  +II + C S
Sbjct: 144 RQMLCDSCLGKKSEKGTSPSICNMCNGSGRVVQGGGFFRVTTTCSKCYGEGKIISNPCKS 203

Query: 36  C 34
           C
Sbjct: 204 C 204


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,160,925
Number of Sequences: 219361
Number of extensions: 658516
Number of successful extensions: 1802
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1797
length of database: 80,573,946
effective HSP length: 60
effective length of database: 67,412,286
effective search space used: 1617894864
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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