>GLDA_CITFR (P45511) Glycerol dehydrogenase (EC 1.1.1.6) (GLDH)|
          Length = 365

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +2

Query: 266 LHDGLRLGVECLYLLGALQKQFETLHRLLFSLSQVQELEFFIRFLEKLG 412
           +H+G  +  EC +L    +  F TL +L+   S ++E+E  + F +K+G
Sbjct: 256 IHNGFTILEECHHLYHGEKVAFGTLAQLVLQNSPMEEIETVLNFCQKVG 304

>PYRH_PYRFU (Q8U122) Probable uridylate kinase (EC 2.7.4.-) (UK) (Uridine|
           monophosphate kinase) (UMP kinase)
          Length = 225

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -2

Query: 479 ELQELM-KGVNQGEGSSAYDMALIQVFPRSG*KTQALGPGSN*KEAGEGSRIVSGEHQG 306
           EL E++ KG+ +   SS  D    ++  RSG KT  +G     ++A +  R++ G+H G
Sbjct: 166 ELLEIVGKGIEKAGSSSVIDPLAAKIIARSGIKTIVIGK----EDAKDLFRVIKGDHNG 220

>SMC4_MICAR (Q9ERA5) Structural maintenance of chromosomes 4-like 1 protein|
           (Chromosome-associated polypeptide C) (XCAP-C homolog)
           (Fragment)
          Length = 1243

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 12/66 (18%)
 Frame = -3

Query: 412 SKFFQEADEKLKLLDLAQTE------------KKPVKGLELFLESTKEVKALDSKPKTIV 269
           +KF +E  EK + LDL   +            KK  K L+   E  +E+K++ +K KTI+
Sbjct: 335 TKFIEENKEKFRQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEELKSIPAKSKTII 394

Query: 268 QNDAKK 251
                K
Sbjct: 395 NETTTK 400

>EF2_METMA (Q8PUR7) Elongation factor 2 (EF-2)|
          Length = 730

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = -3

Query: 322 LESTKEVKALDSKPKTIVQNDAKKPTKTFDVPIKSAAVHRSNRFLIRKEGLVL*LMPA 149
           +E  K V+   SKP  + +   KK T+    PI+  + +R NRF I  E L L ++ A
Sbjct: 449 IERDKNVEITTSKPIVVYRETIKKKTE----PIEGKSPNRHNRFYISVEPLDLEIVSA 502

>THSB_AERPE (Q9YA66) Thermosome subunit beta (Thermosome subunit 2) (Chaperonin|
           beta subunit)
          Length = 548

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = -3

Query: 385 KLKLLDLAQTEKKPVKGLELFLESTKEVKALDSKPKTIVQNDAKKPTKT-FDVPIKSAAV 209
           ++ LLD     +KP   LE+ + S +++KAL  K + I+Q   +K   T  +V I    +
Sbjct: 245 RIALLDTPLEIEKPEIDLEISITSPEQIKALYEKQERILQEKIEKIAATGANVVITQKGI 304

Query: 208 HRSNRFLIRKEGLV 167
               +  + K+G++
Sbjct: 305 DDVAQHFLAKKGIL 318

>SYG1_YEAST (P40528) Protein SYG1|
          Length = 902

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 20/64 (31%), Positives = 29/64 (45%)
 Frame = -3

Query: 373 LDLAQTEKKPVKGLELFLESTKEVKALDSKPKTIVQNDAKKPTKTFDVPIKSAAVHRSNR 194
           L  AQ +K+P+  LE  +       AL + PK    N  K    T    I    VHR+NR
Sbjct: 340 LSSAQRDKEPITWLETQITEWFTT-ALTNSPKDRKHNTHKLKKLTIQYSISEQMVHRNNR 398

Query: 193 FLIR 182
            +++
Sbjct: 399 SIVQ 402

>ENGA_LEPIN (Q8F6K1) GTP-binding protein engA|
          Length = 489

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
 Frame = -3

Query: 391 DEKLKLLDLAQTEK--KPVKGLELFLESTKEVKALDSKPKTIVQNDAKKPTKTFDVPIKS 218
           D +L L D A   K  K  + LE F    + +KA++S    I   DAKK    FD  I S
Sbjct: 273 DRRLLLTDTAGIRKQSKTAEALE-FYSYQRTIKAIESSDLVIHLLDAKKGFGDFDKKITS 331

Query: 217 AAVHRSNRFLI 185
               +   FL+
Sbjct: 332 LLQEKGKPFLL 342

>ENGA_LEPIC (Q72PQ1) GTP-binding protein engA|
          Length = 489

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
 Frame = -3

Query: 391 DEKLKLLDLAQTEK--KPVKGLELFLESTKEVKALDSKPKTIVQNDAKKPTKTFDVPIKS 218
           D +L L D A   K  K  + LE F    + +KA++S    I   DAKK    FD  I S
Sbjct: 273 DRRLLLTDTAGIRKQSKTAEALE-FYSYQRTIKAIESSDLVIHLLDAKKGFGDFDKKITS 331

Query: 217 AAVHRSNRFLI 185
               +   FL+
Sbjct: 332 LLQEKGKPFLL 342

>MRE11_THEAC (Q9HLR7) DNA double-strand break repair protein mre11|
          Length = 376

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
 Frame = -3

Query: 406 FFQEADEKLKLLDLAQTEKKPVKGLELFLESTKEV---------KALDSKPKTIVQNDAK 254
           +  E  EKL  L +   EKKP+ GLE+  + + E           A+ S+PK  ++ D K
Sbjct: 259 YVHEISEKLSSLRVKDNEKKPLVGLEIHGDISMETVMQDISKFDNAIFSRPK--IRKDPK 316

Query: 253 KP---TKTFDV 230
            P   T+T D+
Sbjct: 317 IPNIHTETADL 327

>UIDB_ECOLI (P30868) Glucuronide carrier protein (Glucuronide permease)|
          Length = 457

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 26/81 (32%), Positives = 40/81 (49%)
 Frame = +3

Query: 84  LLLYFPIKQSKQECNVHHEATPAGINHSTRPSLRIKNLFDLCTAALFMGTSNVFVGFLAS 263
           ++LYF   +S +E  V   A P+ +N S +   R + LF LC  AL +  S   V   + 
Sbjct: 194 MVLYFICFKSTRENVVRIVAQPS-LNISLQTLKRNRPLFMLCIGALCVLISTFAVSASSL 252

Query: 264 FCTMVLGLESSAFTSLVLSRN 326
           F    +  ++  FT LVL +N
Sbjct: 253 FYVRYVLNDTGLFTVLVLVQN 273

>KIPA_BPT7 (P00513) Protein kinase (EC 2.7.11.1)|
          Length = 359

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -1

Query: 465 HEGRKSRRRFERL*HGSYPSFSKKRMKNSSSWTWLKLKRSR 343
           HEGR   RRF+R    +  +   KR +  ++W W + +  R
Sbjct: 256 HEGRLEARRFKRRNRKARKAHKAKRERMLAAWRWAERQERR 296

>NARH_BACSU (P42176) Nitrate reductase beta chain (EC 1.7.99.4)|
          Length = 487

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
 Frame = +2

Query: 38  STCLSWKITIRDAGYSSSIFSYQTKQAR--MQCTPRGDAGRHQSQHEAFFTN*EPV*PVH 211
           + C SW+  +    Y    F++QT +A     C PR +AG               +  + 
Sbjct: 212 NACRSWRYCVSSCPYKKVYFNWQTNKAEKCTLCFPRLEAG---------------LPTIC 256

Query: 212 RSTFYGHIERFRRFLGVVLHD 274
             T  G I    R+LGV+L+D
Sbjct: 257 SETCVGRI----RYLGVMLYD 273

>INT1_MOUSE (Q6P4S8) Integrator complex subunit 1 (Int1)|
          Length = 2126

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 142  ASWCTLHSCLLCLIGKYRRR 83
            ASW TLH C+  L+GK R +
Sbjct: 1604 ASWSTLHCCIRVLLGKSREQ 1623

>VBL1_ABMVW (P21946) BL1 protein|
          Length = 293

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 436 RAPMTWLLSKFFQEADEKLKLLDLAQTEKKPVK 338
           RAP   +LSK F E D     +D  + E+KP++
Sbjct: 155 RAPTVRILSKQFSEKDVDFSHVDYGKWERKPIR 187


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,896,832
Number of Sequences: 219361
Number of extensions: 1604456
Number of successful extensions: 4660
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4656
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)