ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags27e21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_196890.1| Oryza sativa (japonica cultivar-group) mitochondrial chaperonin-60 (OSJNBa0071K18.10), mRNA Length = 2024 Score = 222 bits (112), Expect = 7e-55 Identities = 178/200 (89%) Strand = Plus / Minus Query: 221 gattagtaatccattccacccatgccgcccattccaggtgcctctttctcctctttagga 280 |||||||||||||||||||||||||| ||||| | || ||||| ||||| || || || Sbjct: 1727 gattagtaatccattccacccatgcctcccatcgctggcgcctccttctcttcctttggg 1668 Query: 281 atctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatccacc 340 |||||||||||||||| || || || |||||||||||||| || || |||||||||||| Sbjct: 1667 atctctacgatgatggattccgtggttgtcatcagagatgatacgcttgcagcatccacc 1608 Query: 341 aaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatat 400 ||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 1607 aaggcagttctgatcacttttagtgggtcaatgataccagccttcaccatgtccacatat 1548 Query: 401 tcacctttagctgcatcata 420 ||||||||||| |||||||| Sbjct: 1547 tcacctttagccgcatcata 1528
>dbj|AK119623.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H08, full insert sequence Length = 2109 Score = 222 bits (112), Expect = 7e-55 Identities = 178/200 (89%) Strand = Plus / Minus Query: 221 gattagtaatccattccacccatgccgcccattccaggtgcctctttctcctctttagga 280 |||||||||||||||||||||||||| ||||| | || ||||| ||||| || || || Sbjct: 1834 gattagtaatccattccacccatgcctcccatcgctggcgcctccttctcttcctttggg 1775 Query: 281 atctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatccacc 340 |||||||||||||||| || || || |||||||||||||| || || |||||||||||| Sbjct: 1774 atctctacgatgatggattccgtggttgtcatcagagatgatacgcttgcagcatccacc 1715 Query: 341 aaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatat 400 ||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 1714 aaggcagttctgatcacttttagtgggtcaatgataccagccttcaccatgtccacatat 1655 Query: 401 tcacctttagctgcatcata 420 ||||||||||| |||||||| Sbjct: 1654 tcacctttagccgcatcata 1635
>dbj|AK109517.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-109-A02, full insert sequence Length = 2796 Score = 222 bits (112), Expect = 7e-55 Identities = 178/200 (89%) Strand = Plus / Minus Query: 221 gattagtaatccattccacccatgccgcccattccaggtgcctctttctcctctttagga 280 |||||||||||||||||||||||||| ||||| | || ||||| ||||| || || || Sbjct: 2554 gattagtaatccattccacccatgcctcccatcgctggcgcctccttctcttcctttggg 2495 Query: 281 atctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatccacc 340 |||||||||||||||| || || || |||||||||||||| || || |||||||||||| Sbjct: 2494 atctctacgatgatggattccgtggttgtcatcagagatgatacgcttgcagcatccacc 2435 Query: 341 aaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatat 400 ||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 2434 aaggcagttctgatcacttttagtgggtcaatgataccagccttcaccatgtccacatat 2375 Query: 401 tcacctttagctgcatcata 420 ||||||||||| |||||||| Sbjct: 2374 tcacctttagccgcatcata 2355
>dbj|AK069617.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019K12, full insert sequence Length = 2181 Score = 222 bits (112), Expect = 7e-55 Identities = 178/200 (89%) Strand = Plus / Minus Query: 221 gattagtaatccattccacccatgccgcccattccaggtgcctctttctcctctttagga 280 |||||||||||||||||||||||||| ||||| | || ||||| ||||| || || || Sbjct: 1906 gattagtaatccattccacccatgcctcccatcgctggcgcctccttctcttcctttggg 1847 Query: 281 atctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatccacc 340 |||||||||||||||| || || || |||||||||||||| || || |||||||||||| Sbjct: 1846 atctctacgatgatggattccgtggttgtcatcagagatgatacgcttgcagcatccacc 1787 Query: 341 aaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatat 400 ||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 1786 aaggcagttctgatcacttttagtgggtcaatgataccagccttcaccatgtccacatat 1727 Query: 401 tcacctttagctgcatcata 420 ||||||||||| |||||||| Sbjct: 1726 tcacctttagccgcatcata 1707
>gb|BT017311.1| Zea mays clone EL01N0317H06.c mRNA sequence Length = 1194 Score = 163 bits (82), Expect = 6e-37 Identities = 169/198 (85%) Strand = Plus / Minus Query: 223 ttagtaatccattccacccatgccgcccattccaggtgcctctttctcctctttaggaat 282 |||||||||||||||||||||||| |||||| | || ||| | ||| || || || || Sbjct: 935 ttagtaatccattccacccatgccacccattgctggagccggtgcctcttccttggggat 876 Query: 283 ctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatccaccaa 342 |||||| || |||| || || ||||||||||| || ||||||||||||||||||||||| Sbjct: 875 ctctacaattatggattccgtggtggtcatcagggacgacacactagcagcatccaccaa 816 Query: 343 ggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatattc 402 ||||||||||| |||||||| || |||||||||||| |||||||||||||||| ||||| Sbjct: 815 tgcagttctgatgacctttagcggatcaatgataccagccttcaccatgtcaacgtattc 756 Query: 403 acctttagctgcatcata 420 ||||||| |||||||| Sbjct: 755 gtctttagcagcatcata 738
>emb|Z12115.1|ZMCPNAGB Z.mays CPNB gene encoding mitochondrial chaperonin-60 Length = 2104 Score = 163 bits (82), Expect = 6e-37 Identities = 169/198 (85%) Strand = Plus / Minus Query: 223 ttagtaatccattccacccatgccgcccattccaggtgcctctttctcctctttaggaat 282 |||||||||||||||||||||||| |||||| | || ||| | ||| || || || || Sbjct: 1774 ttagtaatccattccacccatgccacccattgctggagccggtgcctcttccttggggat 1715 Query: 283 ctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatccaccaa 342 |||||| || |||| || || ||||||||||| || ||||||||||||||||||||||| Sbjct: 1714 ctctacaattatggattccgtggtggtcatcagggacgacacactagcagcatccaccaa 1655 Query: 343 ggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatattc 402 ||||||||||| |||||||| || |||||||||||| |||||||||||||||| ||||| Sbjct: 1654 tgcagttctgatgacctttagcggatcaatgataccagccttcaccatgtcaacgtattc 1595 Query: 403 acctttagctgcatcata 420 ||||||| |||||||| Sbjct: 1594 gtctttagcagcatcata 1577
>gb|L21006.1|MZECPN60X Zea mays mitochondrial chaperonin 60 (mtcpn60II) mRNA, complete cds Length = 2139 Score = 163 bits (82), Expect = 6e-37 Identities = 169/198 (85%) Strand = Plus / Minus Query: 223 ttagtaatccattccacccatgccgcccattccaggtgcctctttctcctctttaggaat 282 |||||||||||||||||||||||| |||||| | || ||| | ||| || || || || Sbjct: 1882 ttagtaatccattccacccatgccacccattgctggagccggtgcctcttccttggggat 1823 Query: 283 ctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatccaccaa 342 |||||| || |||| || || ||||||||||| || ||||||||||||||||||||||| Sbjct: 1822 ctctacaattatggattccgtggtggtcatcagggacgacacactagcagcatccaccaa 1763 Query: 343 ggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatattc 402 ||||||||||| |||||||| || |||||||||||| |||||||||||||||| ||||| Sbjct: 1762 tgcagttctgatgacctttagcggatcaatgataccagccttcaccatgtcaacgtattc 1703 Query: 403 acctttagctgcatcata 420 ||||||| |||||||| Sbjct: 1702 gtctttagcagcatcata 1685
>gb|BT016176.1| Zea mays clone Contig9 mRNA sequence Length = 885 Score = 159 bits (80), Expect = 9e-36 Identities = 172/202 (85%), Gaps = 3/202 (1%) Strand = Plus / Plus Query: 222 attagtaatccattccacccatgccgcc---cattccaggtgcctctttctcctctttag 278 ||||||||||||| |||||||||||||| |||| | || ||| | ||| || || | Sbjct: 400 attagtaatccatgccacccatgccgccacccattgctggagccggtgcctcttccttgg 459 Query: 279 gaatctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatcca 338 |||||||||| || |||| || || || |||||||| || ||||||||||||||||||| Sbjct: 460 gaatctctacaattatggattccgtggttgtcatcagggacgacacactagcagcatcca 519 Query: 339 ccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacat 398 |||| ||||||||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 520 ccaaagcagttctgataacctttagcgggtcaatgataccggtcttcaccatgtcaacat 579 Query: 399 attcacctttagctgcatcata 420 ||||||||||||| |||||||| Sbjct: 580 attcacctttagcagcatcata 601
>emb|Z11546.1|ZMCHHSP60 Z.mays mRNA for mitochondrial chaperonin hsp60 Length = 2138 Score = 159 bits (80), Expect = 9e-36 Identities = 172/202 (85%), Gaps = 3/202 (1%) Strand = Plus / Minus Query: 222 attagtaatccattccacccatgccgcc---cattccaggtgcctctttctcctctttag 278 ||||||||||||| |||||||||||||| |||| | || ||| | ||| || || | Sbjct: 1794 attagtaatccatgccacccatgccgccacccattgctggagccggtgcctcttccttgg 1735 Query: 279 gaatctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatcca 338 |||||||||| || |||| || || || |||||||| || ||||||||||||||||||| Sbjct: 1734 gaatctctacaattatggattccgtggttgtcatcagggacgacacactagcagcatcca 1675 Query: 339 ccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacat 398 |||| ||||||||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 1674 ccaaagcagttctgataacctttagcgggtcaatgataccggtcttcaccatgtcaacat 1615 Query: 399 attcacctttagctgcatcata 420 ||||||||||||| |||||||| Sbjct: 1614 attcacctttagcagcatcata 1593
>gb|BT023997.1| Zea mays clone EL01N0314G02 mRNA sequence Length = 2188 Score = 159 bits (80), Expect = 9e-36 Identities = 172/202 (85%), Gaps = 3/202 (1%) Strand = Plus / Minus Query: 222 attagtaatccattccacccatgccgcc---cattccaggtgcctctttctcctctttag 278 ||||||||||||| |||||||||||||| |||| | || ||| | ||| || || | Sbjct: 1845 attagtaatccatgccacccatgccgccacccattgctggagccggtgcctcttccttgg 1786 Query: 279 gaatctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatcca 338 |||||||||| || |||| || || || |||||||| || ||||||||||||||||||| Sbjct: 1785 gaatctctacaattatggattccgtggttgtcatcagggacgacacactagcagcatcca 1726 Query: 339 ccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacat 398 |||| ||||||||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 1725 ccaaagcagttctgataacctttagcgggtcaatgataccggtcttcaccatgtcaacat 1666 Query: 399 attcacctttagctgcatcata 420 ||||||||||||| |||||||| Sbjct: 1665 attcacctttagcagcatcata 1644
>gb|AY109623.1| Zea mays CL2221_1 mRNA sequence Length = 2265 Score = 159 bits (80), Expect = 9e-36 Identities = 172/202 (85%), Gaps = 3/202 (1%) Strand = Plus / Minus Query: 222 attagtaatccattccacccatgccgcc---cattccaggtgcctctttctcctctttag 278 ||||||||||||| |||||||||||||| |||| | || ||| | ||| || || | Sbjct: 1922 attagtaatccatgccacccatgccgccacccattgctggagccggtgcctcttccttgg 1863 Query: 279 gaatctctacgatgatggcctctgttgtggtcatcagagatgacacactagcagcatcca 338 |||||||||| || |||| || || || |||||||| || ||||||||||||||||||| Sbjct: 1862 gaatctctacaattatggattccgtggttgtcatcagggacgacacactagcagcatcca 1803 Query: 339 ccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacat 398 |||| ||||||||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 1802 ccaaagcagttctgataacctttagcgggtcaatgataccggtcttcaccatgtcaacat 1743 Query: 399 attcacctttagctgcatcata 420 ||||||||||||| |||||||| Sbjct: 1742 attcacctttagcagcatcata 1721
>emb|Z12114.1|ZMCPNAGA Z.mays CPNA gene encoding mitochondrial chaperonin-60 Length = 2247 Score = 153 bits (77), Expect = 6e-34 Identities = 104/113 (92%) Strand = Plus / Minus Query: 308 gtcatcagagatgacacactagcagcatccaccaaggcagttctgatcacctttagtggg 367 |||||||| || ||||||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 1833 gtcatcagggacgacacactagcagcatccaccaaagcagttctgataacctttagcggg 1774 Query: 368 tcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatcata 420 ||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 1773 tcaatgataccggtcttcaccatgtcaacatattcacctttagcagcatcata 1721
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 131 bits (66), Expect = 2e-27 Identities = 75/78 (96%) Strand = Plus / Plus Query: 329 gcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcacc 388 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 121572 gcagcatccaccaaggcagttctgatcacttttagtgggtcaatgataccagccttcacc 121631 Query: 389 atgtcaacatattcacct 406 ||||| |||||||||||| Sbjct: 121632 atgtccacatattcacct 121649 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 221 gattagtaatccattccacccatgccgcccattccaggtgcctctttctcctctttagga 280 |||||||||||||||||||||||||| ||||| | || ||||| ||||| || || || Sbjct: 121277 gattagtaatccattccacccatgcctcccatcgctggcgcctccttctcttcctttggg 121336 Query: 281 atctctacgatgatggcctctgttgtggtcatcagagatga 321 |||||||||||||||| || || || |||||||||||||| Sbjct: 121337 atctctacgatgatggattccgtggttgtcatcagagatga 121377
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 131 bits (66), Expect = 2e-27 Identities = 75/78 (96%) Strand = Plus / Minus Query: 329 gcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcacc 388 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 16538670 gcagcatccaccaaggcagttctgatcacttttagtgggtcaatgataccagccttcacc 16538611 Query: 389 atgtcaacatattcacct 406 ||||| |||||||||||| Sbjct: 16538610 atgtccacatattcacct 16538593 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 221 gattagtaatccattccacccatgccgcccattccaggtgcctctttctcctctttagga 280 |||||||||||||||||||||||||| ||||| | || ||||| ||||| || || || Sbjct: 16538965 gattagtaatccattccacccatgcctcccatcgctggcgcctccttctcttcctttggg 16538906 Query: 281 atctctacgatgatggcctctgttgtggtcatcagagatga 321 |||||||||||||||| || || || |||||||||||||| Sbjct: 16538905 atctctacgatgatggattccgtggttgtcatcagagatga 16538865
>dbj|AK073999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073C08, full insert sequence Length = 2223 Score = 131 bits (66), Expect = 2e-27 Identities = 108/122 (88%) Strand = Plus / Minus Query: 299 tctgttgtggtcatcagagatgacacactagcagcatccaccaaggcagttctgatcacc 358 ||||| || ||||| ||||| |||||||| ||||||||||||| || |||||||| || Sbjct: 1752 tctgtggtagtcattagagaggacacacttgcagcatccaccagagctgttctgataact 1693 Query: 359 tttagtgggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatca 418 ||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 1692 tttagtgggtcaatgataccagacttcaccatgtcaacgtattcacctttagcagcatca 1633 Query: 419 ta 420 || Sbjct: 1632 ta 1631
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 131 bits (66), Expect = 2e-27 Identities = 75/78 (96%) Strand = Plus / Minus Query: 329 gcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcacc 388 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 16546911 gcagcatccaccaaggcagttctgatcacttttagtgggtcaatgataccagccttcacc 16546852 Query: 389 atgtcaacatattcacct 406 ||||| |||||||||||| Sbjct: 16546851 atgtccacatattcacct 16546834 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Minus Query: 221 gattagtaatccattccacccatgccgcccattccaggtgcctctttctcctctttagga 280 |||||||||||||||||||||||||| ||||| | || ||||| ||||| || || || Sbjct: 16547206 gattagtaatccattccacccatgcctcccatcgctggcgcctccttctcttcctttggg 16547147 Query: 281 atctctacgatgatggcctctgttgtggtcatcagagatga 321 |||||||||||||||| || || || |||||||||||||| Sbjct: 16547146 atctctacgatgatggattccgtggttgtcatcagagatga 16547106
>gb|L21007.1|MZECPN60A Corn nuclear-encoded mitochondrial chaperonin 60 (cpn60I) gene, complete cds Length = 6575 Score = 113 bits (57), Expect = 5e-22 Identities = 75/81 (92%) Strand = Plus / Minus Query: 326 ctagcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttc 385 ||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||| Sbjct: 5671 ctagcagcatccaccaaagcagttctgataacctttagcgggtcaatgataccggtcttc 5612 Query: 386 accatgtcaacatattcacct 406 ||||||||||||||||||||| Sbjct: 5611 accatgtcaacatattcacct 5591 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 222 attagtaatccattccacccatgccgcc 249 ||||||||||||| |||||||||||||| Sbjct: 5981 attagtaatccatgccacccatgccgcc 5954
>gb|L21008.1|MZECPN60B Corn nuclear-encoded mitochondrial chaperonin 60 (cpn60II) gene, complete cds Length = 7905 Score = 105 bits (53), Expect = 1e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 326 ctagcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttc 385 ||||||||||||||||| ||||||||||| |||||||| || |||||||||||| ||||| Sbjct: 6778 ctagcagcatccaccaatgcagttctgatgacctttagcggatcaatgataccagccttc 6719 Query: 386 accatgtcaacatattc 402 ||||||||||| ||||| Sbjct: 6718 accatgtcaacgtattc 6702 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 223 ttagtaatccattccacccatgccgcccatt 253 |||||||||||||||||||||||| |||||| Sbjct: 7126 ttagtaatccattccacccatgccacccatt 7096
>emb|BX825898.1|CNS0A57I Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL70ZG05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 943 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 302 gttgtggtcatcagagatgacacactagcagcatccaccaaggcagttctgatcaccttt 361 ||||| |||| || |||||||||||| |||||||| ||||| || ||||||||||| || Sbjct: 658 gttgtcgtcaacaaagatgacacactcgcagcatcaaccaaagctgttctgatcactttc 599 Query: 362 agtgggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatcata 420 || ||||| ||||| ||| | |||||||| || ||||||||||||||||| |||||||| Sbjct: 598 agagggtctatgattccagctttcaccatatccacatattcacctttagcagcatcata 540
>ref|NM_113304.3| Arabidopsis thaliana HSP60; ATP binding / protein binding AT3G23990 (HSP60) mRNA, complete cds Length = 2119 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 302 gttgtggtcatcagagatgacacactagcagcatccaccaaggcagttctgatcaccttt 361 ||||| |||| || |||||||||||| |||||||| ||||| || || |||||||| || Sbjct: 1728 gttgtcgtcaacaaagatgacacactcgcagcatcaaccaaagctgtcctgatcactttc 1669 Query: 362 agtgggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatcata 420 || ||||| ||||| ||| | |||||||| || ||||||||||||||||| |||||||| Sbjct: 1668 agagggtctatgattccagctttcaccatatccacatattcacctttagcagcatcata 1610
>gb|BT010398.1| Arabidopsis thaliana At3g23990 mRNA, complete cds Length = 1734 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 302 gttgtggtcatcagagatgacacactagcagcatccaccaaggcagttctgatcaccttt 361 ||||| |||| || |||||||||||| |||||||| ||||| || || |||||||| || Sbjct: 1643 gttgtcgtcaacaaagatgacacactcgcagcatcaaccaaagctgtcctgatcactttc 1584 Query: 362 agtgggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatcata 420 || ||||| ||||| ||| | |||||||| || ||||||||||||||||| |||||||| Sbjct: 1583 agagggtctatgattccagctttcaccatatccacatattcacctttagcagcatcata 1525
>emb|Z11547.1|ATCHHSP60 A.thaliana mRNA for mitochondrial chaperonin hsp60 Length = 1998 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 302 gttgtggtcatcagagatgacacactagcagcatccaccaaggcagttctgatcaccttt 361 ||||| |||| || |||||||||||| |||||||| ||||| || || |||||||| || Sbjct: 1717 gttgtcgtcaacaaagatgacacactcgcagcatcaaccaaagctgtcctgatcactttc 1658 Query: 362 agtgggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatcata 420 || ||||| ||||| ||| | |||||||| || ||||||||||||||||| |||||||| Sbjct: 1657 agagggtctatgattccagctttcaccatatccacatattcacctttagcagcatcata 1599
>gb|AY099594.1| Arabidopsis thaliana mitochondrial chaperonin hsp60 (At3g23990) mRNA, complete cds Length = 1994 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 302 gttgtggtcatcagagatgacacactagcagcatccaccaaggcagttctgatcaccttt 361 ||||| |||| || |||||||||||| |||||||| ||||| || || |||||||| || Sbjct: 1728 gttgtcgtcaacaaagatgacacactcgcagcatcaaccaaagctgtcctgatcactttc 1669 Query: 362 agtgggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatcata 420 || ||||| ||||| ||| | |||||||| || ||||||||||||||||| |||||||| Sbjct: 1668 agagggtctatgattccagctttcaccatatccacatattcacctttagcagcatcata 1610
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 329 gcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcacc 388 ||||||||||||| || |||||||| || ||||||||||||||||||||| ||||||| Sbjct: 2383499 gcagcatccaccagagctgttctgataacttttagtgggtcaatgataccagacttcacc 2383558 Query: 389 atgtcaacatattcacct 406 |||||||| ||||||||| Sbjct: 2383559 atgtcaacgtattcacct 2383576
>gb|AC122149.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083D24, complete sequence Length = 150503 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 329 gcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcacc 388 ||||||||||||| || |||||||| || ||||||||||||||||||||| ||||||| Sbjct: 100341 gcagcatccaccagagctgttctgataacttttagtgggtcaatgataccagacttcacc 100400 Query: 389 atgtcaacatattcacct 406 |||||||| ||||||||| Sbjct: 100401 atgtcaacgtattcacct 100418
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 329 gcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcacc 388 ||||||||||||| || |||||||| || ||||||||||||||||||||| ||||||| Sbjct: 2383609 gcagcatccaccagagctgttctgataacttttagtgggtcaatgataccagacttcacc 2383668 Query: 389 atgtcaacatattcacct 406 |||||||| ||||||||| Sbjct: 2383669 atgtcaacgtattcacct 2383686
>gb|BT012804.1| Lycopersicon esculentum clone 113820R, mRNA sequence Length = 2008 Score = 81.8 bits (41), Expect = 2e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 320 gacacactagcagcatccaccaaggcagttctgatcacctttagtgggtcaatgatacca 379 ||||||||||||||||| |||||||| || || || || || | ||| |||||||| || Sbjct: 1708 gacacactagcagcatcaaccaaggccgtcctaattactttcaatggatcaatgattcct 1649 Query: 380 accttcaccatgtcaacatattcacctttagctgcatcatatcca 424 | || ||||||||||||||||||||||| || |||||||||||| Sbjct: 1648 gcttttaccatgtcaacatattcaccttttgcagcatcatatcca 1604
>gb|AF489695.1| Prunus dulcis heat shock protein 60 (HSP60) mRNA, partial cds Length = 1887 Score = 73.8 bits (37), Expect = 4e-10 Identities = 106/129 (82%) Strand = Plus / Minus Query: 296 gcctctgttgtggtcatcagagatgacacactagcagcatccaccaaggcagttctgatc 355 |||||||| |||||||| | || ||||| || || ||||| |||||||| |||||||| Sbjct: 1563 gcctctgtcgtggtcattaacgaggacacgcttgcggcatcgaccaaggcggttctgatg 1504 Query: 356 acctttagtgggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgca 415 || || | ||| |||||||| || |||| | |||||| |||||||||||||| |||||| Sbjct: 1503 actttcaatggatcaatgatccctgcctttatcatgtctacatattcaccttttgctgca 1444 Query: 416 tcatatcca 424 || |||||| Sbjct: 1443 tcgtatcca 1435
>emb|Z27165.1|BNMTCHA B.napus mRNA for mitochondrial chaperonin Length = 1952 Score = 69.9 bits (35), Expect = 6e-09 Identities = 98/119 (82%) Strand = Plus / Minus Query: 302 gttgtggtcatcagagatgacacactagcagcatccaccaaggcagttctgatcaccttt 361 ||||| |||| || ||| || ||||| |||||||| ||||| || ||||||||||| || Sbjct: 1694 gttgttgtcaacaaagacgagacacttgcagcatcaaccaatgcggttctgatcactttc 1635 Query: 362 agtgggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatcata 420 | ||||| || |||||| ||||||||| ||||| ||||| |||||||| |||||||| Sbjct: 1634 acagggtcgataataccagacttcaccatatcaacgtattctcctttagcagcatcata 1576
>ref|NM_112240.2| Arabidopsis thaliana ATP binding / protein binding AT3G13860 mRNA, complete cds Length = 2022 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 341 aaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatat 400 ||||| |||||||||||||| | |||||| ||||| ||| | |||||||| || |||||| Sbjct: 1720 aaggcggttctgatcaccttgactgggtctatgattccagctttcaccatatccacatat 1661 Query: 401 tcacctttagctgcatc 417 | |||||| |||||||| Sbjct: 1660 ttacctttggctgcatc 1644
>gb|BT015923.1| Arabidopsis thaliana At3g13860 gene, complete cds Length = 1719 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 341 aaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatat 400 ||||| |||||||||||||| | |||||| ||||| ||| | |||||||| || |||||| Sbjct: 1604 aaggcggttctgatcaccttgactgggtctatgattccagctttcaccatatccacatat 1545 Query: 401 tcacctttagctgcatc 417 | |||||| |||||||| Sbjct: 1544 ttacctttggctgcatc 1528
>gb|AY094453.1| Arabidopsis thaliana AT3g13860/MCP4_7 mRNA, complete cds Length = 1975 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 341 aaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatat 400 ||||| |||||||||||||| | |||||| ||||| ||| | |||||||| || |||||| Sbjct: 1720 aaggcggttctgatcaccttgactgggtctatgattccagctttcaccatatccacatat 1661 Query: 401 tcacctttagctgcatc 417 | |||||| |||||||| Sbjct: 1660 ttacctttggctgcatc 1644
>gb|AY056782.1| Arabidopsis thaliana AT3g13860/MCP4_7 mRNA, complete cds Length = 1974 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 341 aaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatat 400 ||||| |||||||||||||| | |||||| ||||| ||| | |||||||| || |||||| Sbjct: 1719 aaggcggttctgatcaccttgactgggtctatgattccagctttcaccatatccacatat 1660 Query: 401 tcacctttagctgcatc 417 | |||||| |||||||| Sbjct: 1659 ttacctttggctgcatc 1643
>gb|AY089145.1| Arabidopsis thaliana clone 38045 mRNA, complete sequence Length = 1925 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 341 aaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatat 400 ||||| |||||||||||||| | |||||| ||||| ||| | |||||||| || |||||| Sbjct: 1672 aaggcggttctgatcaccttgactgggtctatgattccagctttcaccatatccacatat 1613 Query: 401 tcacctttagctgcatc 417 | |||||| |||||||| Sbjct: 1612 ttacctttggctgcatc 1596
>gb|AC149482.1| Populus trichocarpa clone Pop1-69G3, complete sequence Length = 107795 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 329 gcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcacc 388 |||||||| ||||| |||||||| || || || || |||||||| || ||| | |||||| Sbjct: 7270 gcagcatcgaccaaagcagttctaattactttcagcgggtcaataatgccagctttcacc 7211 Query: 389 atgtcaacatattca 403 || |||||||||||| Sbjct: 7210 atatcaacatattca 7196
>gb|BT013503.1| Lycopersicon esculentum clone 132191F, mRNA sequence Length = 2115 Score = 54.0 bits (27), Expect = 4e-04 Identities = 99/123 (80%) Strand = Plus / Minus Query: 302 gttgtggtcatcagagatgacacactagcagcatccaccaaggcagttctgatcaccttt 361 |||||||||| ||||| || ||||| |||||||| ||||| || || |||||||| || Sbjct: 1773 gttgtggtcaaaagagacgagacactggcagcatcgaccaaagctgtcctgatcactttc 1714 Query: 362 agtgggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatcatat 421 | ||| || ||||| || |||| | ||| || ||||||||||| || || ||||||||| Sbjct: 1713 actggatcgatgattcctgcctttatcatatctacatattcacccttggccgcatcatat 1654 Query: 422 cca 424 ||| Sbjct: 1653 cca 1651
>ref|NM_179872.1| Arabidopsis thaliana ATP binding / protein binding AT2G33210 mRNA, complete cds Length = 2094 Score = 52.0 bits (26), Expect = 0.001 Identities = 80/98 (81%) Strand = Plus / Minus Query: 323 acactagcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaacc 382 ||||| |||||||| || || || ||||||||||| || | || || || |||||| || Sbjct: 1777 acacttgcagcatcaactaatgcggttctgatcactttcaaaggatcgataataccagcc 1718 Query: 383 ttcaccatgtcaacatattcacctttagctgcatcata 420 || | |||||| |||||||| |||||||| |||||||| Sbjct: 1717 tttatcatgtccacatattctcctttagcagcatcata 1680
>gb|BT000103.1| Arabidopsis thaliana mitochondrial chaperonin HSP60 (At2g33210) mRNA, complete cds Length = 1799 Score = 52.0 bits (26), Expect = 0.001 Identities = 80/98 (81%) Strand = Plus / Minus Query: 323 acactagcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaacc 382 ||||| |||||||| || || || ||||||||||| || | || || || |||||| || Sbjct: 1625 acacttgcagcatcaactaatgcggttctgatcactttcaaaggatcgataataccagcc 1566 Query: 383 ttcaccatgtcaacatattcacctttagctgcatcata 420 || | |||||| |||||||| |||||||| |||||||| Sbjct: 1565 tttatcatgtccacatattctcctttagcagcatcata 1528
>gb|AY136360.1| Arabidopsis thaliana mitochondrial chaperonin HSP60 (At2g33210) mRNA, complete cds Length = 1982 Score = 52.0 bits (26), Expect = 0.001 Identities = 80/98 (81%) Strand = Plus / Minus Query: 323 acactagcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaacc 382 ||||| |||||||| || || || ||||||||||| || | || || || |||||| || Sbjct: 1665 acacttgcagcatcaactaatgcggttctgatcactttcaaaggatcgataataccagcc 1606 Query: 383 ttcaccatgtcaacatattcacctttagctgcatcata 420 || | |||||| |||||||| |||||||| |||||||| Sbjct: 1605 tttatcatgtccacatattctcctttagcagcatcata 1568
>dbj|AK175415.1| Arabidopsis thaliana mRNA for mitochondrial chaperonin (HSP60), complete cds, clone: RAFL21-85-D12 Length = 2089 Score = 52.0 bits (26), Expect = 0.001 Identities = 80/98 (81%) Strand = Plus / Minus Query: 323 acactagcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaacc 382 ||||| |||||||| || || || ||||||||||| || | || || || |||||| || Sbjct: 1788 acacttgcagcatcaactaatgcggttctgatcactttcaaaggatcgataataccagcc 1729 Query: 383 ttcaccatgtcaacatattcacctttagctgcatcata 420 || | |||||| |||||||| |||||||| |||||||| Sbjct: 1728 tttatcatgtccacatattctcctttagcagcatcata 1691
>dbj|AP001297.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F14O13 Length = 106203 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Minus Query: 329 gcagcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcacc 388 |||||||| ||||| || || |||||||| || || ||||| ||||| ||| | |||||| Sbjct: 74911 gcagcatcaaccaaagctgtcctgatcactttcagagggtctatgattccagctttcacc 74852 Query: 389 atgtcaacatattcacct 406 || || |||||||||||| Sbjct: 74851 atatccacatattcacct 74834
>dbj|AB028610.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MCP4 Length = 38810 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 341 aaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatat 400 ||||| |||||||||||||| | |||||| ||||| ||| | |||||||| || |||||| Sbjct: 26032 aaggcggttctgatcaccttgactgggtctatgattccagctttcaccatatccacatat 26091 Query: 401 tcacct 406 | |||| Sbjct: 26092 ttacct 26097
>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome Length = 2056416 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 219 tggattagtaatccattccacccatgccgcccat 252 |||||||| ||||||| ||||||||||||||||| Sbjct: 1984029 tggattagaaatccataccacccatgccgcccat 1983996
>gb|L11654.1|ZMOGROESLA Zymomonas mobilis groESL operon: groES and groEL genes, complete cds Length = 2769 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 219 tggattagtaatccattccacccatgccgcccat 252 |||||||| ||||||| ||||||||||||||||| Sbjct: 2648 tggattagaaatccataccacccatgccgcccat 2615
>gb|AF387864.1|AF387864 Buchnera aphidicola (Rhopalosiphum padi) GroEL-related molecular chaperonin SymL (symL) gene, complete cds Length = 1647 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 232 cattccacccatgccgcccattcca 256 ||||||||||||||||||||||||| Sbjct: 1641 cattccacccatgccgcccattcca 1617
>gb|AF387863.1|AF387863 Buchnera aphidicola (Rhopalosiphum maidis) GroEL-related molecular chaperonin SymL (symL) gene, complete cds Length = 1647 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 232 cattccacccatgccgcccattcca 256 ||||||||||||||||||||||||| Sbjct: 1641 cattccacccatgccgcccattcca 1617
>gb|AY067276.1| Schmidtea mediterranea clone H.21.6h unknown mRNA sequence Length = 699 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 231 ccattccacccatgccgcccattcc 255 ||||||||||||||||||||||||| Sbjct: 144 ccattccacccatgccgcccattcc 168
>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome Length = 2314078 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattccaggtgcc 262 ||||||||||||||||||||||| ||| |||| Sbjct: 427684 ccattccacccatgccgcccattgcagctgcc 427653
>ref|XM_589340.2| PREDICTED: Bos taurus 60 kDa protein 1-like protein (LOC511913), mRNA Length = 2738 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattccagg 258 |||||||||||||||| ||||||||||| Sbjct: 2224 ccattccacccatgccacccattccagg 2197
>ref|XM_880722.1| PREDICTED: Bos taurus similar to 60 kDa heat shock protein, mitochondrial precursor (Hsp60) (60 kDa chaperonin) (CPN60) (Heat shock protein 60) (HSP-60) (Mitochondrial matrix protein P1) (P60 lymphocyte protein) (HuCHA60), transcript variant 4 (LOC615700), mRNA Length = 2315 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattccagg 258 |||||||||||||||| ||||||||||| Sbjct: 1816 ccattccacccatgccacccattccagg 1789
>ref|XM_867695.1| PREDICTED: Bos taurus similar to 60 kDa heat shock protein, mitochondrial precursor (Hsp60) (60 kDa chaperonin) (CPN60) (Heat shock protein 60) (HSP-60) (Mitochondrial matrix protein P1) (P60 lymphocyte protein) (HuCHA60), transcript variant 1 (LOC615700), mRNA Length = 2277 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattccagg 258 |||||||||||||||| ||||||||||| Sbjct: 1778 ccattccacccatgccacccattccagg 1751
>ref|XM_880674.1| PREDICTED: Bos taurus similar to 60 kDa heat shock protein, mitochondrial precursor (Hsp60) (60 kDa chaperonin) (CPN60) (Heat shock protein 60) (HSP-60) (Mitochondrial matrix protein P1) (P60 lymphocyte protein) (HuCHA60), transcript variant 3 (LOC615700), mRNA Length = 1739 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattccagg 258 |||||||||||||||| ||||||||||| Sbjct: 1240 ccattccacccatgccacccattccagg 1213
>ref|XM_880647.1| PREDICTED: Bos taurus similar to 60 kDa heat shock protein, mitochondrial precursor (Hsp60) (60 kDa chaperonin) (CPN60) (Heat shock protein 60) (HSP-60) (Mitochondrial matrix protein P1) (P60 lymphocyte protein) (HuCHA60), transcript variant 2 (LOC615700), mRNA Length = 1236 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattccagg 258 |||||||||||||||| ||||||||||| Sbjct: 737 ccattccacccatgccacccattccagg 710
>emb|X70868.1|CSMCPN602 Cucurbita sp. pMCPN60-2 mRNA for chaperonin 60 Length = 2217 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 222 attagtaatccattccacccatgccgcc 249 |||||||||||||||| ||||||||||| Sbjct: 1874 attagtaatccattcctcccatgccgcc 1847 Score = 44.1 bits (22), Expect = 0.36 Identities = 100/126 (79%) Strand = Plus / Minus Query: 292 gatggcctctgttgtggtcatcagagatgacacactagcagcatccaccaaggcagttct 351 |||||| ||||| || ||||||| ||| || || ||||| ||||| |||| |||||||| Sbjct: 1801 gatggcttctgtagttgtcatcaaagaggaaacgctagcggcatcgaccagtgcagttct 1742 Query: 352 gatcacctttagtgggtcaatgataccaaccttcaccatgtcaacatattcacctttagc 411 || || || || || |||||||| ||| | || | ||| || |||||||||||||| || Sbjct: 1741 aattactttaagaggatcaatgatgccagctttgatcatatccacatattcaccttttgc 1682 Query: 412 tgcatc 417 ||||| Sbjct: 1681 agcatc 1676
>gb|AC161864.9| Medicago truncatula clone mth2-69d21, complete sequence Length = 133324 Score = 46.1 bits (23), Expect = 0.092 Identities = 62/75 (82%) Strand = Plus / Plus Query: 332 gcatccaccaaggcagttctgatcacctttagtgggtcaatgataccaaccttcaccatg 391 ||||| |||||||| || || |||||||| | ||| ||||| || ||| | || ||||| Sbjct: 111885 gcatcaaccaaggcggtcctaatcaccttcaatggatcaataattccagctttaaccata 111944 Query: 392 tcaacatattcacct 406 ||||||||||||||| Sbjct: 111945 tcaacatattcacct 111959
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 231 ccattccacccatgccgcccattccag 257 |||||||||||||||||||||| |||| Sbjct: 4526672 ccattccacccatgccgcccataccag 4526698
>emb|X57520.1|LMGROELSR L.micdadei DNA for gro ELS operon Length = 2770 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccatt 253 ||||||||||||||||||||||| Sbjct: 2085 ccattccacccatgccgcccatt 2063
>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome Length = 1830138 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattccag 257 ||||||||||||| ||||||||||||| Sbjct: 567579 ccattccacccataccgcccattccag 567553
>ref|NM_116478.2| Arabidopsis thaliana unknown protein AT4G02450 mRNA, complete cds Length = 1052 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattcca 256 |||||||||||||||| ||||||||| Sbjct: 672 ccattccacccatgcctcccattcca 647
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattcca 256 |||| ||||||||||||||||||||| Sbjct: 1680795 ccatgccacccatgccgcccattcca 1680770
>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome Length = 1913428 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 232 cattccacccatgccgcccattccag 257 |||||||||||| ||||||||||||| Sbjct: 633766 cattccacccataccgcccattccag 633741
>gb|AY515128.1| Bartonella rattimassiliensis strain 16115 GroEL gene, partial cds Length = 1461 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 227 taatccattccacccatgccgcccattcca 256 ||||||||||| ||||| |||||||||||| Sbjct: 1461 taatccattccgcccattccgcccattcca 1432
>gb|AC165070.2| Phakopsora pachyrhizi clone JGIAFNA-829C10, complete sequence Length = 26958 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 231 ccattccacccatgccgcccattccaggtg 260 ||||||| ||||| |||||||||||||||| Sbjct: 24693 ccattccgcccattccgcccattccaggtg 24722
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattcca 256 ||||||||||||| |||||||||||| Sbjct: 640240 ccattccacccataccgcccattcca 640215
>gb|BT000527.1| Arabidopsis thaliana unknown protein (At4g02450/T14P8_5) mRNA, complete cds Length = 726 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattcca 256 |||||||||||||||| ||||||||| Sbjct: 559 ccattccacccatgcctcccattcca 534
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccat 252 |||||||||||||||||||||| Sbjct: 699150 ccattccacccatgccgcccat 699129
>emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 6 Length = 194892 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 ccattccacccatgccgcccattcca 256 |||||||||||||||| ||||||||| Sbjct: 110025 ccattccacccatgcctcccattcca 110050
>emb|AJ606101.1| Oleispira antarctica pBK-CMV fragment cpn10 gene, estRB8 gene and cpn60DR gene, strain RB8 Length = 5373 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccat 252 |||||||||||||||||||||| Sbjct: 2078 ccattccacccatgccgcccat 2057
>emb|AJ606100.1| Oleispira antarctica pBK-CMV fragment cpn10 gene, estRB8 gene and cpn60SR gene, strain RB8 Length = 5373 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccat 252 |||||||||||||||||||||| Sbjct: 2078 ccattccacccatgccgcccat 2057
>emb|AJ505131.1|OAN505131 Oleispira antarctica cpn10 gene for cochaperonin 10 and cpn60 gene for chaperonin 60 Length = 2783 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccat 252 |||||||||||||||||||||| Sbjct: 2423 ccattccacccatgccgcccat 2402
>gb|AY126999.1| Arabidopsis thaliana AT4g02450/T14P8_5 mRNA, complete cds Length = 1031 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattcca 256 |||||||||||||||| ||||||||| Sbjct: 671 ccattccacccatgcctcccattcca 646
>emb|AJ606099.1| Oleispira antarctica pBK1CpnEst fragment cpn10 gene, cpn60 gene and estRB8 gene, strain RB8 Length = 5373 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccat 252 |||||||||||||||||||||| Sbjct: 2078 ccattccacccatgccgcccat 2057
>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome Length = 1308759 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattcca 256 |||| ||||||||||||||||||||| Sbjct: 166223 ccatgccacccatgccgcccattcca 166198
>gb|AF069298.1|T14P8 Arabidopsis thaliana BAC T14P8 Length = 94536 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattcca 256 |||||||||||||||| ||||||||| Sbjct: 36589 ccattccacccatgcctcccattcca 36564
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccat 252 |||||||||||||||||||||| Sbjct: 691840 ccattccacccatgccgcccat 691819
>gb|DQ138690.1| Drosophila yakuba strain T33 CG17304 gene, partial cds Length = 504 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccat 252 |||||||||||||||||||||| Sbjct: 289 ccattccacccatgccgcccat 268
>gb|DQ138689.1| Drosophila yakuba strain Tai18 CG17304 gene, partial cds Length = 504 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccat 252 |||||||||||||||||||||| Sbjct: 286 ccattccacccatgccgcccat 265
>emb|AL683876.5| Mouse DNA sequence from clone RP23-100E6 on chromosome 2, complete sequence Length = 207486 Score = 44.1 bits (22), Expect = 0.36 Identities = 46/54 (85%) Strand = Plus / Plus Query: 322 cacactagcagcatccaccaaggcagttctgatcacctttagtgggtcaatgat 375 ||||| ||||||||||| ||||||||||| | |||||| |||||||||||| Sbjct: 54841 cacaccagcagcatccagtaaggcagttcttacaacctttgttgggtcaatgat 54894
>gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 14, complete sequence Length = 762694 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattcc 255 ||||||||||||| ||||||||||| Sbjct: 563660 ccattccacccattccgcccattcc 563636
>gb|BC068415.1| Danio rerio heat shock 60kD protein 1 (chaperonin), mRNA (cDNA clone MGC:85875 IMAGE:6966920), complete cds Length = 2739 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattcc 255 |||||||||||||||| |||||||| Sbjct: 1752 ccattccacccatgcctcccattcc 1728
>gb|AY596454.1| Cytophaga sp. FIRDI-133-V546 chaperonin 60 (cpn60) gene, complete cds Length = 1641 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattcc 255 ||||||||||||| ||||||||||| Sbjct: 1627 ccattccacccataccgcccattcc 1603
>gb|BC044557.1| Danio rerio heat shock 60kD protein 1 (chaperonin), mRNA (cDNA clone MGC:55967 IMAGE:3819432), complete cds Length = 2253 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattcc 255 |||||||||||||||| |||||||| Sbjct: 1781 ccattccacccatgcctcccattcc 1757
>gb|AC127596.3| Mus musculus BAC clone RP23-56B4 from chromosome 10, complete sequence Length = 114020 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 acaataaaattacatcaaaga 151 ||||||||||||||||||||| Sbjct: 70892 acaataaaattacatcaaaga 70912
>ref|XM_568675.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNN01940) partial mRNA Length = 1547 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattcc 255 ||||||||||||| ||||||||||| Sbjct: 1269 ccattccacccattccgcccattcc 1245
>emb|BX530407.26| Zebrafish DNA sequence from clone DKEY-83M22 in linkage group 9, complete sequence Length = 292409 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 231 ccattccacccatgccgcccattcc 255 |||||||||||||||| |||||||| Sbjct: 271085 ccattccacccatgcctcccattcc 271109
>emb|BX936402.12| Zebrafish DNA sequence from clone CH211-128D20 in linkage group 9, complete sequence Length = 156082 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattcc 255 |||||||||||||||| |||||||| Sbjct: 17280 ccattccacccatgcctcccattcc 17256
>ref|NM_181330.3| Danio rerio heat shock 60kD protein 1 (chaperonin) (hspd1), mRNA Length = 2739 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattcc 255 |||||||||||||||| |||||||| Sbjct: 1752 ccattccacccatgcctcccattcc 1728
>ref|XM_501542.1| Yarrowia lipolytica CLIB122, YALI0C07040g predicted mRNA Length = 1821 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 tccacccatgccgcccattcc 255 ||||||||||||||||||||| Sbjct: 1416 tccacccatgccgcccattcc 1396
>gb|AF461397.1| Chlamydomonas reinhardtii retinal binding protein (cop4) gene, complete cds Length = 2241 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattcc 255 |||||||||||||||| |||||||| Sbjct: 2122 ccattccacccatgcctcccattcc 2098
>emb|BX294148.1| Pirellula sp. strain 1 complete genome; segment 16/24 Length = 294850 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattcc 255 |||||||||||||||| |||||||| Sbjct: 204061 ccattccacccatgcctcccattcc 204037
>emb|AJ439087.1|BAP439087 Buchnera aphidicola (Chaetophorus leucomelas) groEL gene Length = 1656 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 cattccacccatgccgcccattcca 256 ||||||||||||||| ||||||||| Sbjct: 1650 cattccacccatgccacccattcca 1626
>emb|AJ344981.1|BSP344981 Buchnera sp. 389 partial groEL gene Length = 1608 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 cattccacccatgccgcccattcca 256 ||||||||||||||| ||||||||| Sbjct: 1608 cattccacccatgccacccattcca 1584
>emb|AJ344978.1|BSP344978 Buchnera sp. 150 groES gene for GroES- related molecular chaperonin and groEL gene Length = 2028 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 cattccacccatgccgcccattcca 256 ||||||||||||||| ||||||||| Sbjct: 2008 cattccacccatgccacccattcca 1984
>emb|AJ344977.1|BSP344977 Buchnera sp. N27 groES gene for GroES- related molecular chaperonin and groEL gene Length = 2021 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 cattccacccatgccgcccattcca 256 ||||||||||||||| ||||||||| Sbjct: 2008 cattccacccatgccacccattcca 1984
>emb|AJ344976.1|BSP344976 Buchnera sp. partial groEL gene (from Rhopalosiphum maidis) Length = 1621 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 cattccacccatgccgcccattcca 256 ||||||||||||||| ||||||||| Sbjct: 1608 cattccacccatgccacccattcca 1584
>gb|AF508968.1| Chlamydomonas reinhardtii sensory opsin B (CSOB) gene, complete cds Length = 7143 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattcc 255 |||||||||||||||| |||||||| Sbjct: 5475 ccattccacccatgcctcccattcc 5451
>gb|AF508966.1| Chlamydomonas reinhardtii sensory opsin B (CSOB) mRNA, complete cds Length = 3599 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattcc 255 |||||||||||||||| |||||||| Sbjct: 2125 ccattccacccatgcctcccattcc 2101
>gb|AC024599.9| Homo sapiens chromosome 10 clone RP11-159H3, complete sequence Length = 173391 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 gatggcctctgttgtggtcat 312 ||||||||||||||||||||| Sbjct: 9886 gatggcctctgttgtggtcat 9866
>gb|AC012690.17| Homo sapiens chromosome 10 clone RP11-127B19, complete sequence Length = 161276 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 gatggcctctgttgtggtcat 312 ||||||||||||||||||||| Sbjct: 99256 gatggcctctgttgtggtcat 99236
>gb|AF434719.1|AF434719 Buchnera aphidicola (Schizaphis graminum) SymL (symL) gene, complete cds Length = 1647 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 cattccacccatgccgcccattcca 256 ||||||||||||||| ||||||||| Sbjct: 1641 cattccacccatgccacccattcca 1617
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 220 ggattagtaatccattccacccatgccgcccat 252 ||||||| | ||||| ||||||||||||||||| Sbjct: 6729372 ggattagaagtccatgccacccatgccgcccat 6729404 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 221 gattagtaatccattccacccatgccgcccat 252 |||||| ||||||| || |||||||||||||| Sbjct: 4687259 gattagaaatccatgccgcccatgccgcccat 4687290
>emb|BX571722.18| Zebrafish DNA sequence from clone DKEY-96O13 in linkage group 9, complete sequence Length = 228214 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattcc 255 |||||||||||||||| |||||||| Sbjct: 54844 ccattccacccatgcctcccattcc 54820
>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome Length = 1698955 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 cattccacccatgccgcccattcca 256 |||||||||||| |||||||||||| Sbjct: 1494171 cattccacccataccgcccattcca 1494195
>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome Length = 1799146 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 cattccacccatgccgcccattcca 256 |||||||||||| |||||||||||| Sbjct: 1170293 cattccacccataccgcccattcca 1170269
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 tccacccatgccgcccattcc 255 ||||||||||||||||||||| Sbjct: 943489 tccacccatgccgcccattcc 943469
>gb|U77380.1|RPU77380 Rhopalosiphum padi endosymbiont GroEL-related molecular chaperonin SymL (symL) gene, complete cds Length = 1647 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 cattccacccatgccgcccattcca 256 ||||||||||||||| ||||||||| Sbjct: 1641 cattccacccatgccacccattcca 1617
>emb|AL954388.5| Mouse DNA sequence from clone RP23-395P6 on chromosome 2, complete sequence Length = 131825 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 cctctttctcctctttaggaa 281 ||||||||||||||||||||| Sbjct: 6633 cctctttctcctctttaggaa 6653
>gb|M91030.1|HEAGROESL Haemophilus ducreyi heat shock protein (groES and groEL) gene, complete cds Length = 2200 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 cattccacccatgccgcccattcca 256 |||||||||||| |||||||||||| Sbjct: 2110 cattccacccataccgcccattcca 2086
>dbj|AB058891.1| Chlamydomonas reinhardtii acop2 mRNA for archaeal-type opsin 2, complete cds Length = 2448 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattcc 255 |||||||||||||||| |||||||| Sbjct: 2121 ccattccacccatgcctcccattcc 2097
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 catgccgcccattccaggtg 260 |||||||||||||||||||| Sbjct: 1076015 catgccgcccattccaggtg 1075996
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ccattccacccatgccgccc 250 |||||||||||||||||||| Sbjct: 636104 ccattccacccatgccgccc 636085
>ref|XM_475802.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2040 Score = 40.1 bits (20), Expect = 5.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 365 gggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatcata 420 ||||| ||||| ||| |||| | |||||||||||| || ||| | ||||||||||| Sbjct: 1895 gggtcgatgatcccagccttaatcatgtcaacatactcccctcttgctgcatcata 1840
>gb|L21708.2|PFA34K Plasmodium berghei p23-like protein mRNA, partial cds Length = 1311 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ccacccatgccgcccattcc 255 |||||||||||||||||||| Sbjct: 124 ccacccatgccgcccattcc 105
>gb|AC145554.2| Mus musculus BAC clone RP23-217E22 from chromosome 18, complete sequence Length = 214489 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 attcatggattagtaatcca 233 |||||||||||||||||||| Sbjct: 191938 attcatggattagtaatcca 191919
>emb|AJ130877.1|PAC130877 Plectus acuminatus mRNA for heat shock protein 60 (HSP60) Length = 2068 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ccacccatgccgcccattcc 255 |||||||||||||||||||| Sbjct: 1796 ccacccatgccgcccattcc 1777
>gb|AC125095.3| Mus musculus BAC clone RP24-179H12 from chromosome 14, complete sequence Length = 147123 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 agttccgtttggaacatcgc 102 |||||||||||||||||||| Sbjct: 90139 agttccgtttggaacatcgc 90120
>gb|AC122470.3| Mus musculus BAC clone RP24-320O6 from chromosome 18, complete sequence Length = 190916 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 attcatggattagtaatcca 233 |||||||||||||||||||| Sbjct: 77581 attcatggattagtaatcca 77562
>ref|XM_675144.1| Plasmodium berghei strain ANKA hypothetical protein (PB001312.02.0) partial mRNA Length = 804 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ccacccatgccgcccattcc 255 |||||||||||||||||||| Sbjct: 488 ccacccatgccgcccattcc 469
>emb|X61150.1|APSYMSL Acyrthosiphon pisum endosymbiont symS and symL genes for symbionin Length = 2739 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 cattccacccatgccgcccattcc 255 ||||||||||||||| |||||||| Sbjct: 2204 cattccacccatgccacccattcc 2181
>emb|AL133415.13| Human DNA sequence from clone RP11-124N14 on chromosome 10 Contains the 5' end of the DNMT2 gene for DNA (cytosine-5-)-methyltransferase 2, two novel genes, the VIM gene for vimentin and two CpG islands, complete sequence Length = 94168 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tcccagtttgcttcatatat 206 |||||||||||||||||||| Sbjct: 4898 tcccagtttgcttcatatat 4879
>emb|X70867.1|CSMCPN601 Cucurbita sp. pMCPN60-1 mRNA for chaperonin 60 Length = 2023 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 ttagtaatccattccacccatgcc 246 ||||||||||||||| |||||||| Sbjct: 1758 ttagtaatccattccgcccatgcc 1735
>emb|Z66568.2|SPAC12G12 S.pombe chromosome I cosmid c12G12 Length = 32095 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cattccacccatgccgcccattcc 255 ||||||||||||||| |||||||| Sbjct: 23156 cattccacccatgccacccattcc 23179
>ref|XM_689311.1| PREDICTED: Danio rerio similar to single-stranded DNA-binding protein isoform a (LOC573517), mRNA Length = 564 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 tccattccacccatgccgcccatt 253 ||||| |||||||||||||||||| Sbjct: 245 tccatgccacccatgccgcccatt 222
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cattccacccatgccgcccattcc 255 |||||| ||||||||||||||||| Sbjct: 2293919 cattccgcccatgccgcccattcc 2293942
>ref|NM_001018294.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC12G12.04), partial mRNA Length = 1749 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 cattccacccatgccgcccattcc 255 ||||||||||||||| |||||||| Sbjct: 1734 cattccacccatgccacccattcc 1711
>gb|AE004677.1| Pseudomonas aeruginosa PAO1, section 238 of 529 of the complete genome Length = 9950 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ccattccacccatgccgccc 250 |||||||||||||||||||| Sbjct: 7749 ccattccacccatgccgccc 7730
>dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisum) genomic DNA, complete sequence Length = 640681 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 cattccacccatgccgcccattcc 255 ||||||||||||||| |||||||| Sbjct: 20355 cattccacccatgccacccattcc 20332
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 aatccattccacccatgccg 247 |||||||||||||||||||| Sbjct: 5081134 aatccattccacccatgccg 5081115
>emb|AJ236837.1|HVU236837 Hordeum vulgare partial mRNA for putative senescence specific alpha-galactosidase Length = 447 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ccacccatgccgcccattcc 255 |||||||||||||||||||| Sbjct: 22 ccacccatgccgcccattcc 3
>dbj|AK070127.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045O03, full insert sequence Length = 2139 Score = 40.1 bits (20), Expect = 5.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 365 gggtcaatgataccaaccttcaccatgtcaacatattcacctttagctgcatcata 420 ||||| ||||| ||| |||| | |||||||||||| || ||| | ||||||||||| Sbjct: 1661 gggtcgatgatcccagccttaatcatgtcaacatactcccctcttgctgcatcata 1606
>emb|BX649534.9| Zebrafish DNA sequence from clone DKEY-31F5 in linkage group 4, complete sequence Length = 205347 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 cccaacactcatcccaacac 81 |||||||||||||||||||| Sbjct: 9558 cccaacactcatcccaacac 9577
>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome Length = 1992676 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 attcacctttagctgcatca 418 |||||||||||||||||||| Sbjct: 1074883 attcacctttagctgcatca 1074864
>gb|AC151578.1| Mus musculus BAC clone RP23-218K4 from 18, complete sequence Length = 192387 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 attcatggattagtaatcca 233 |||||||||||||||||||| Sbjct: 182727 attcatggattagtaatcca 182746
>gb|M22383.1|CRUP1P Chinese hamster P1 protein mRNA, complete cds Length = 2238 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 231 ccattccacccatgccgcccattccagg 258 ||||||||||||| ||||||||||||| Sbjct: 1735 ccattccacccattgcgcccattccagg 1708
>dbj|D50609.1|YSPHSPH Fission yeast gene for mitochondrial heat-shock protein (HSP60), complete cds Length = 4118 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 cattccacccatgccgcccattcc 255 ||||||||||||||| |||||||| Sbjct: 3306 cattccacccatgccacccattcc 3283
>gb|U04320.1|RRU04320 Rattus norvegicus Wistar alpha B-crystallin gene, complete cds Length = 6806 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ggtgcctctttctcctcttt 276 |||||||||||||||||||| Sbjct: 2688 ggtgcctctttctcctcttt 2707 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,850,601 Number of Sequences: 3902068 Number of extensions: 3850601 Number of successful extensions: 74814 Number of sequences better than 10.0: 136 Number of HSP's better than 10.0 without gapping: 133 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 74229 Number of HSP's gapped (non-prelim): 591 length of query: 424 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 402 effective length of database: 17,147,199,772 effective search space: 6893174308344 effective search space used: 6893174308344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
