>emb|Z30243.1|SCCLHSP S.cereale (Halo) chloroplast mRNA for heat-shock protein
          Length = 2654

 Score =  244 bits (123), Expect = 2e-61
 Identities = 178/199 (89%), Gaps = 3/199 (1%)
 Strand = Plus / Minus

                                                                        
Query: 187  ggatgcctacagaactaactaatctntccatgggtcattctcgttctcagtcctgacttc 246
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2465 ggatgcctacagaactaactaatctctccatgggtcattctcgttctcagtcctgacttc 2406

                                                                        
Query: 247  ggatggntcaacaacctccgttacaacggnttcanaanagt---cgttgacattggtctc 303
            |||||| ||||  ||||||| ||||||   |||| || |||   ||| ||||||||||||
Sbjct: 2405 ggatggctcaatgacctccggtacaacaccttcagaagagtcaccgtcgacattggtctc 2346

                                                                        
Query: 304  agcctcctcggngccggatntaccccatttnccgccaagggcgatggtcatcatntcgta 363
            ||||||||||| ||||||| |||||||| | ||||||||||||||||||||||| |||||
Sbjct: 2345 agcctcctcggcgccggatctaccccatctcccgccaagggcgatggtcatcatctcgta 2286

                               
Query: 364  aatnttgccccccaactcc 382
             || |||||||||||||||
Sbjct: 2285 gatcttgccccccaactcc 2267



 Score =  212 bits (107), Expect = 6e-52
 Identities = 155/168 (92%), Gaps = 6/168 (3%)
 Strand = Plus / Minus

                                                                        
Query: 9    atttaattt-acgaccgtcaaaaaagtcacctacaaaatttagccttgg-cg----caaa 62
            ||||||||| ||| |||||||||||||||||||||||||||| |||||| ||    ||||
Sbjct: 2646 atttaatttcacggccgtcaaaaaagtcacctacaaaatttatccttgggcgataacaaa 2587

                                                                        
Query: 63   caagattttggagctcagcgttcttacaaagacagtccattgctcgatgtcatcatcact 122
            ||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2586 caagattctggagctcagtgttcttacaaagacagtccatcgctcgatgtcatcatcact 2527

                                                            
Query: 123  ctggctccagtgatacttctattttttgctcatccacctccagggtat 170
            ||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 2526 ctggctccagtgatactcctattttttgctcgtccacctccagggtat 2479

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                        
Query: 326      ccccatttnccgccaagggcgatggtcatcatntcgtaaatnttgccccccaactc 381
                |||||| | |||||||| |||||||||||||| ||||| || ||||| ||||||||
Sbjct: 18096426 ccccatctcccgccaagagcgatggtcatcatctcgtagatcttgccacccaactc 18096481

>dbj|AP006169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0026C08
          Length = 155316

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                     
Query: 326   ccccatttnccgccaagggcgatggtcatcatntcgtaaatnttgccccccaactc 381
             |||||| | |||||||| |||||||||||||| ||||| || ||||| ||||||||
Sbjct: 89548 ccccatctcccgccaagagcgatggtcatcatctcgtagatcttgccacccaactc 89603

>dbj|AK073817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068G01, full
            insert sequence
          Length = 2890

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 326  ccccatttnccgccaagggcgatggtcatcatntcgtaaatnttgccccccaactc 381
            |||||| | |||||||| |||||||||||||| ||||| || ||||| ||||||||
Sbjct: 2458 ccccatctcccgccaagagcgatggtcatcatctcgtagatcttgccacccaactc 2403

>gb|AY106328.1| Zea mays PCO125641 mRNA sequence
          Length = 1769

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 326  ccccatttnccgccaagggcgatggtcatcatntcgtaaatnttgccccccaactcc 382
            |||||| | ||||| ||||| ||||||||||| ||||| || ||||| |||| ||||
Sbjct: 1565 ccccatctcccgccgagggccatggtcatcatctcgtagatcttgcctcccagctcc 1509

>gb|AC158397.2| Mus musculus BAC clone RP23-274H19 from chromosome 16, complete
             sequence
          Length = 197843

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 27    aaaaaagtcacctacaaaatttag 50
             |||||| |||||||||||||||||
Sbjct: 99018 aaaaaaatcacctacaaaatttag 99041

>ref|XM_483065.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2702

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 47/57 (82%)
 Strand = Plus / Minus

                                                                     
Query: 326  ccccatttnccgccaagggcgatggtcatcatntcgtaaatnttgccccccaactcc 382
            |||||| | ||||||||||| || |||||||| || || || || || |||||||||
Sbjct: 2355 ccccatctcccgccaagggcaattgtcatcatctcatagatcttaccacccaactcc 2299

>gb|AY641576.1| Avian infectious bronchitis virus isolate Peafowl/GD/KQ6/2003,
            complete genome
          Length = 27434

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 105  ctcgatgtcatcatcactct 124
            ||||||||||||||||||||
Sbjct: 2886 ctcgatgtcatcatcactct 2867

>gb|AY514485.1| Avian infectious bronchitis virus strain Cal99, complete genome
          Length = 27693

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 105  ctcgatgtcatcatcactct 124
            ||||||||||||||||||||
Sbjct: 2884 ctcgatgtcatcatcactct 2865

>gb|AC116996.3| Mus musculus BAC clone RP23-6B22 from 15, complete sequence
          Length = 229669

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   cagtgatacttctatttttt 149
             ||||||||||||||||||||
Sbjct: 10287 cagtgatacttctatttttt 10268

>emb|AL049794.16|HSDJ777L9 Human DNA sequence from clone RP4-777L9 on chromosome 20 Contains the
             5' end of the C20orf23 gene for a novel protein similar to
             KIF1 type and other kinesin-like proteins, the RPLP0P1
             gene for ribosomal protein large P0 pseudogene 1 and a CpG
             island, complete sequence
          Length = 119696

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    aaaaagtcacctacaaaatt 47
             ||||||||||||||||||||
Sbjct: 84665 aaaaagtcacctacaaaatt 84646

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 47/57 (82%)
 Strand = Plus / Plus

                                                                         
Query: 326      ccccatttnccgccaagggcgatggtcatcatntcgtaaatnttgccccccaactcc 382
                |||||| | ||||||||||| || |||||||| || || || || || |||||||||
Sbjct: 24117967 ccccatctcccgccaagggcaattgtcatcatctcatagatcttaccacccaactcc 24118023

>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0028A08
          Length = 150818

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 47/57 (82%)
 Strand = Plus / Plus

                                                                      
Query: 326   ccccatttnccgccaagggcgatggtcatcatntcgtaaatnttgccccccaactcc 382
             |||||| | ||||||||||| || |||||||| || || || || || |||||||||
Sbjct: 71453 ccccatctcccgccaagggcaattgtcatcatctcatagatcttaccacccaactcc 71509

>dbj|AK122102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125K17, full
            insert sequence
          Length = 2702

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 47/57 (82%)
 Strand = Plus / Minus

                                                                     
Query: 326  ccccatttnccgccaagggcgatggtcatcatntcgtaaatnttgccccccaactcc 382
            |||||| | ||||||||||| || |||||||| || || || || || |||||||||
Sbjct: 2355 ccccatctcccgccaagggcaattgtcatcatctcatagatcttaccacccaactcc 2299

>emb|CR769778.10| Zebrafish DNA sequence from clone CH211-147N12 in linkage group 18,
             complete sequence
          Length = 162450

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 5     agccatttaatttacgaccgtcaaaaaa 32
             |||| ||||||||||||| |||||||||
Sbjct: 17835 agccgtttaatttacgactgtcaaaaaa 17808

>gb|AC160934.2| Mus musculus BAC clone RP23-435H22 from chromosome 15, complete sequence
          Length = 183147

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    cagtgatacttctatttttt 149
              ||||||||||||||||||||
Sbjct: 128559 cagtgatacttctatttttt 128578


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,837,968
Number of Sequences: 3902068
Number of extensions: 2837968
Number of successful extensions: 47066
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47022
Number of HSP's gapped (non-prelim): 43
length of query: 385
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 363
effective length of database: 17,147,199,772
effective search space: 6224433517236
effective search space used: 6224433517236
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)