ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags27e11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.029
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.029
3emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa... 48 0.029
4gb|AY105633.1| Zea mays PCO138672 mRNA sequence 44 0.45
5gb|AF187725.1| Homo sapiens survival of motor neuron 2 (SMN2) ge... 42 1.8
6gb|U80017.1|HSU80017 Homo sapiens basic transcription factor 2 p... 42 1.8
7gb|AF189367.1| Homo sapiens survival of motor neuron 1 (SMN1) ge... 42 1.8
8gb|AC182658.2| Populus trichocarpa clone Pop1-124E10, complete s... 42 1.8
9gb|AC140134.2| Homo sapiens chromosome 5 clone RP11-1319K7, comp... 42 1.8
10gb|AC139778.2| Homo sapiens chromosome 5 clone RP11-1012N14, com... 42 1.8
11gb|AC183527.2| Mus musculus BAC clone RP23-30G12 from chromosome... 42 1.8
12gb|AC182687.2| Populus trichocarpa clone Pop1-39C16, complete se... 42 1.8
13emb|BX890632.7| Mouse DNA sequence from clone RP23-93E11 on chro... 42 1.8
14gb|AC010217.6| Homo sapiens chromosome 5 clone CTC-202F24, compl... 42 1.8
15gb|AC016554.8| Homo sapiens chromosome 5 clone CTC-340H12, compl... 42 1.8
16gb|AC159615.2| Mus musculus BAC clone RP24-484P4 from chromosome... 42 1.8
17gb|AC022119.4|AC022119 Homo sapiens chromosome 5 clone CTC-566F1... 42 1.8
18gb|AC044797.5|AC044797 Homo sapiens chromosome 5 clone RP11-195E... 42 1.8
19gb|AC139834.2| Homo sapiens chromosome 5 clone RP11-974F13, comp... 42 1.8
20gb|AC139494.2| Homo sapiens chromosome 5 clone RP11-846E15, comp... 42 1.8
21dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 42 1.8
22gb|AC004999.1|AC004999 Homo sapiens PAC clone RP1-215P15 from 5q... 42 1.8
23emb|BX511193.5| Zebrafish DNA sequence from clone DKEY-149J18 in... 42 1.8
24gb|AF092925.1|AF092925 Homo sapiens survival of motor neuron (SM... 42 1.8
25gb|AC137748.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
26gb|AC128647.8| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
27gb|AC150492.2| Bos taurus BAC CH240-454H24 (Children's Hospital... 40 7.1
28gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.1
29emb|CR391949.7| Zebrafish DNA sequence from clone CH211-149B20 i... 40 7.1
30emb|AL109920.15|HSDJ335E1 Human DNA sequence from clone RP3-335E... 40 7.1
31gb|AC151907.5| Mus musculus BAC clone RP23-163E23 from chromosom... 40 7.1
32gb|AC017063.8| Homo sapiens BAC clone RP11-354H17 from 4, comple... 40 7.1
33gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genom... 40 7.1
34dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
35dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
36gb|AC093387.6| Homo sapiens BAC clone RP11-613G12 from 2, comple... 40 7.1
37gb|AC078940.4| Homo sapiens BAC clone RP11-144B8 from 2, complet... 40 7.1
38gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 40 7.1
39gb|AC165408.5| Mus musculus chromosome 18, clone wi1-2909J7, com... 40 7.1
40gb|AC171402.5| Mus musculus chromosome 18, clone wi1-1819F9, com... 40 7.1
41gb|AC135113.4| Mus musculus BAC clone RP24-63N7 from 15, complet... 40 7.1
42emb|AL773522.15| Mouse DNA sequence from clone RP23-148P20 on ch... 40 7.1 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                            
Query: 362      ttattcttcccttttaaactgcaagaccccaatctgaccctggttaatgttgccgaggtc 421
                ||||||||| ||||| ||||| |||||||||||  | | |||||||||||||  || |||
Sbjct: 19518916 ttattcttcgcttttgaactgtaagaccccaattggcctctggttaatgttgttgaagtc 19518857

                                                
Query: 422      tgttcttgcatgcgaagcttgattgctagaca 453
                ||   ||| | | ||||||||||| |||||||
Sbjct: 19518856 tgccattgtaagtgaagcttgattactagaca 19518825



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 496      cattctggttgctgcccctaccaaccggt 524
                ||||||||||| | |||||||||||||||
Sbjct: 19518776 cattctggttgtttcccctaccaaccggt 19518748
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                            
Query: 362      ttattcttcccttttaaactgcaagaccccaatctgaccctggttaatgttgccgaggtc 421
                ||||||||| ||||| ||||| |||||||||||  | | |||||||||||||  || |||
Sbjct: 19445129 ttattcttcgcttttgaactgtaagaccccaattggcctctggttaatgttgttgaagtc 19445070

                                                
Query: 422      tgttcttgcatgcgaagcttgattgctagaca 453
                ||   ||| | | ||||||||||| |||||||
Sbjct: 19445069 tgccattgtaagtgaagcttgattactagaca 19445038



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 496      cattctggttgctgcccctaccaaccggt 524
                ||||||||||| | |||||||||||||||
Sbjct: 19444989 cattctggttgtttcccctaccaaccggt 19444961
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>emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa0009K11 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 144596

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                         
Query: 362   ttattcttcccttttaaactgcaagaccccaatctgaccctggttaatgttgccgaggtc 421
             ||||||||| ||||| ||||| |||||||||||  | | |||||||||||||  || |||
Sbjct: 51097 ttattcttcgcttttgaactgtaagaccccaattggcctctggttaatgttgttgaagtc 51038

                                             
Query: 422   tgttcttgcatgcgaagcttgattgctagaca 453
             ||   ||| | | ||||||||||| |||||||
Sbjct: 51037 tgccattgtaagtgaagcttgattactagaca 51006



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 496   cattctggttgctgcccctaccaaccggt 524
             ||||||||||| | |||||||||||||||
Sbjct: 50957 cattctggttgtttcccctaccaaccggt 50929
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>gb|AY105633.1| Zea mays PCO138672 mRNA sequence
          Length = 615

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 490 ttcctccattctggttgctgcccctaccaaccgg 523
           ||||| ||||||||||| |||||| |||||||||
Sbjct: 318 ttcctgcattctggttgttgccccgaccaaccgg 285
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>gb|AF187725.1| Homo sapiens survival of motor neuron 2 (SMN2) gene, promoter region
          Length = 4652

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 6    tatatagaatacaagaaatatctgt 30
            ||||||| |||||||||||||||||
Sbjct: 3446 tatatagtatacaagaaatatctgt 3422
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>gb|U80017.1|HSU80017 Homo sapiens basic transcription factor 2 p44 (btf2p44) gene, partial
              cds, neuronal apoptosis inhibitory protein (naip) and
              survival motor neuron protein (smn) genes, complete cds
          Length = 131078

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 6      tatatagaatacaagaaatatctgt 30
              ||||||| |||||||||||||||||
Sbjct: 122606 tatatagtatacaagaaatatctgt 122630
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>gb|AF189367.1| Homo sapiens survival of motor neuron 1 (SMN1) gene, promoter region
          Length = 4652

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 6    tatatagaatacaagaaatatctgt 30
            ||||||| |||||||||||||||||
Sbjct: 3446 tatatagtatacaagaaatatctgt 3422
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>gb|AC182658.2| Populus trichocarpa clone Pop1-124E10, complete sequence
          Length = 99811

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 53    ttattacaatacaaacaataa 73
             |||||||||||||||||||||
Sbjct: 25127 ttattacaatacaaacaataa 25107
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>gb|AC140134.2| Homo sapiens chromosome 5 clone RP11-1319K7, complete sequence
          Length = 217820

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 6      tatatagaatacaagaaatatctgt 30
              ||||||| |||||||||||||||||
Sbjct: 110535 tatatagtatacaagaaatatctgt 110511
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>gb|AC139778.2| Homo sapiens chromosome 5 clone RP11-1012N14, complete sequence
          Length = 180014

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 6      tatatagaatacaagaaatatctgt 30
              ||||||| |||||||||||||||||
Sbjct: 116982 tatatagtatacaagaaatatctgt 117006
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>gb|AC183527.2| Mus musculus BAC clone RP23-30G12 from chromosome 12, complete sequence
          Length = 208026

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 22     aatatctgtacattcacttctcctttgaa 50
              ||||||||||||||| ||||| |||||||
Sbjct: 124632 aatatctgtacattcccttcttctttgaa 124604
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>gb|AC182687.2| Populus trichocarpa clone Pop1-39C16, complete sequence
          Length = 75303

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 53    ttattacaatacaaacaataa 73
             |||||||||||||||||||||
Sbjct: 52323 ttattacaatacaaacaataa 52343
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>emb|BX890632.7| Mouse DNA sequence from clone RP23-93E11 on chromosome X, complete
              sequence
          Length = 194049

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 63     acaaacaataacatgttggggaata 87
              |||||||||||||||||| ||||||
Sbjct: 114506 acaaacaataacatgttgaggaata 114482
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>gb|AC010217.6| Homo sapiens chromosome 5 clone CTC-202F24, complete sequence
          Length = 169137

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 6     tatatagaatacaagaaatatctgt 30
             ||||||| |||||||||||||||||
Sbjct: 43110 tatatagtatacaagaaatatctgt 43134
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>gb|AC016554.8| Homo sapiens chromosome 5 clone CTC-340H12, complete sequence
          Length = 113213

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 6     tatatagaatacaagaaatatctgt 30
             ||||||| |||||||||||||||||
Sbjct: 82495 tatatagtatacaagaaatatctgt 82471
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>gb|AC159615.2| Mus musculus BAC clone RP24-484P4 from chromosome 12, complete sequence
          Length = 127735

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 22    aatatctgtacattcacttctcctttgaa 50
             ||||||||||||||| ||||| |||||||
Sbjct: 67435 aatatctgtacattcccttcttctttgaa 67463
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>gb|AC022119.4|AC022119 Homo sapiens chromosome 5 clone CTC-566F17, complete sequence
          Length = 155974

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 6     tatatagaatacaagaaatatctgt 30
             ||||||| |||||||||||||||||
Sbjct: 43583 tatatagtatacaagaaatatctgt 43559
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>gb|AC044797.5|AC044797 Homo sapiens chromosome 5 clone RP11-195E2, complete sequence
          Length = 190871

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 6     tatatagaatacaagaaatatctgt 30
             ||||||| |||||||||||||||||
Sbjct: 20716 tatatagtatacaagaaatatctgt 20692
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>gb|AC139834.2| Homo sapiens chromosome 5 clone RP11-974F13, complete sequence
          Length = 185457

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 6      tatatagaatacaagaaatatctgt 30
              ||||||| |||||||||||||||||
Sbjct: 173340 tatatagtatacaagaaatatctgt 173316
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>gb|AC139494.2| Homo sapiens chromosome 5 clone RP11-846E15, complete sequence
          Length = 210288

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 6      tatatagaatacaagaaatatctgt 30
              ||||||| |||||||||||||||||
Sbjct: 115629 tatatagtatacaagaaatatctgt 115605
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>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 237    aatgatgctaacgttatattatttg 261
              |||| ||||||||||||||||||||
Sbjct: 379139 aatgttgctaacgttatattatttg 379163
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>gb|AC004999.1|AC004999 Homo sapiens PAC clone RP1-215P15 from 5q12, complete sequence
          Length = 129541

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 6     tatatagaatacaagaaatatctgt 30
             ||||||| |||||||||||||||||
Sbjct: 54021 tatatagtatacaagaaatatctgt 54045
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>emb|BX511193.5| Zebrafish DNA sequence from clone DKEY-149J18 in linkage group 18,
             complete sequence
          Length = 97603

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 44    ctttgaatcttattacaatacaaacaataacat 76
             |||||||||||||| ||||| ||||||| ||||
Sbjct: 24188 ctttgaatcttattgcaataaaaacaatcacat 24156
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>gb|AF092925.1|AF092925 Homo sapiens survival of motor neuron (SMN) gene, promoter region
           and partial cds
          Length = 2131

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 6   tatatagaatacaagaaatatctgt 30
           ||||||| |||||||||||||||||
Sbjct: 664 tatatagtatacaagaaatatctgt 640
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>gb|AC137748.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0076A09, complete sequence
          Length = 157010

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    tacaatacaaacaataacat 76
             ||||||||||||||||||||
Sbjct: 75856 tacaatacaaacaataacat 75875
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>gb|AC128647.8| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0062G19, complete sequence
          Length = 92392

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   ccatctacaaatcataaaca 137
             ||||||||||||||||||||
Sbjct: 88028 ccatctacaaatcataaaca 88047
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>gb|AC150492.2| Bos taurus  BAC CH240-454H24 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 185197

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 4     catatatagaatacaagaaatatctgta 31
             |||||||||||||||| |||| ||||||
Sbjct: 51771 catatatagaatacaacaaatttctgta 51744
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 118      ccatctacaaatcataaaca 137
                ||||||||||||||||||||
Sbjct: 35834089 ccatctacaaatcataaaca 35834108
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>emb|CR391949.7| Zebrafish DNA sequence from clone CH211-149B20 in linkage group 9,
             complete sequence
          Length = 162252

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    tacaatacaaacaataacat 76
             ||||||||||||||||||||
Sbjct: 11445 tacaatacaaacaataacat 11464
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>emb|AL109920.15|HSDJ335E1 Human DNA sequence from clone RP3-335E1 on chromosome 6q16.2-21
             Contains a CpG island, complete sequence
          Length = 143805

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 361   tttattcttcccttttaaac 380
             ||||||||||||||||||||
Sbjct: 64438 tttattcttcccttttaaac 64419
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>gb|AC151907.5| Mus musculus BAC clone RP23-163E23 from chromosome 15, complete
             sequence
          Length = 197165

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    tcctttgaatcttattacaa 61
             ||||||||||||||||||||
Sbjct: 96049 tcctttgaatcttattacaa 96068
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>gb|AC017063.8| Homo sapiens BAC clone RP11-354H17 from 4, complete sequence
          Length = 193092

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    tacaaacaataacatgttgg 81
             ||||||||||||||||||||
Sbjct: 34214 tacaaacaataacatgttgg 34233
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>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete
              sequence
          Length = 145115

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    ccatctacaaatcataaaca 137
              ||||||||||||||||||||
Sbjct: 127036 ccatctacaaatcataaaca 127017
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 57       tacaatacaaacaataacat 76
                ||||||||||||||||||||
Sbjct: 15047106 tacaatacaaacaataacat 15047125
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 118      ccatctacaaatcataaaca 137
                ||||||||||||||||||||
Sbjct: 35924219 ccatctacaaatcataaaca 35924238
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>gb|AC093387.6| Homo sapiens BAC clone RP11-613G12 from 2, complete sequence
          Length = 124250

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     tacaatacaaacaataacat 76
              ||||||||||||||||||||
Sbjct: 123218 tacaatacaaacaataacat 123199
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>gb|AC078940.4| Homo sapiens BAC clone RP11-144B8 from 2, complete sequence
          Length = 166315

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 57  tacaatacaaacaataacat 76
           ||||||||||||||||||||
Sbjct: 968 tacaatacaaacaataacat 949
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 317     tcaaccaaacaccaccgcgg 336
               ||||||||||||||||||||
Sbjct: 1609000 tcaaccaaacaccaccgcgg 1609019



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 317     tcaaccaaacaccaccgcgg 336
               ||||||||||||||||||||
Sbjct: 1443345 tcaaccaaacaccaccgcgg 1443364



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 317     tcaaccaaacaccaccgcgg 336
               ||||||||||||||||||||
Sbjct: 1267983 tcaaccaaacaccaccgcgg 1268002



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 317    tcaaccaaacaccaccgcgg 336
              ||||||||||||||||||||
Sbjct: 238314 tcaaccaaacaccaccgcgg 238295
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>gb|AC165408.5| Mus musculus chromosome 18, clone wi1-2909J7, complete sequence
          Length = 39518

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 335   ggcaactcagtagccagggcccag 358
             ||||||||| ||||||||||||||
Sbjct: 34957 ggcaactcactagccagggcccag 34934
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>gb|AC171402.5| Mus musculus chromosome 18, clone wi1-1819F9, complete sequence
          Length = 22572

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 335   ggcaactcagtagccagggcccag 358
             ||||||||| ||||||||||||||
Sbjct: 13965 ggcaactcactagccagggcccag 13942
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>gb|AC135113.4| Mus musculus BAC clone RP24-63N7 from 15, complete sequence
          Length = 173656

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    tcctttgaatcttattacaa 61
             ||||||||||||||||||||
Sbjct: 34845 tcctttgaatcttattacaa 34826
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>emb|AL773522.15| Mouse DNA sequence from clone RP23-148P20 on chromosome 4, complete
             sequence
          Length = 185592

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   aactgacccatctacaaatc 130
             ||||||||||||||||||||
Sbjct: 59942 aactgacccatctacaaatc 59961


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,381,365
Number of Sequences: 3902068
Number of extensions: 5381365
Number of successful extensions: 107327
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107129
Number of HSP's gapped (non-prelim): 198
length of query: 524
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 501
effective length of database: 17,143,297,704
effective search space: 8588792149704
effective search space used: 8588792149704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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