>NU4M_MARPO (P26848) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 495

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -2

Query: 140 HPKEMLLASSICFHFIILLNCATEKVCFYVLF-SAYIPRLXLL 15
           + KE ++A  IC  F+I + C+ + + FYV F S  IP   ++
Sbjct: 115 YKKEYMIAFFICESFLIAVFCSLDLLIFYVFFESVLIPMFIII 157

>GPC6A_RAT (Q70VB1) G-protein coupled receptor family C group 6 member A|
           precursor
          Length = 928

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 131 EMLLASSICFHFIILLNCATEKVCFYVLFSAYIPRL 24
           E+  A +    F+   NC+ E V F   +S+Y+PR+
Sbjct: 105 EVTAAMAATLRFLSKFNCSRETVIFQCDYSSYVPRV 140

>GPC6A_MOUSE (Q8K4Z6) G-protein coupled receptor family C group 6 member A|
           precursor
          Length = 928

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 131 EMLLASSICFHFIILLNCATEKVCFYVLFSAYIPRL 24
           E+  A +    F+   NC+ E V F   +S+Y+PR+
Sbjct: 105 EVTAAMAATLRFLSKFNCSRETVVFQCDYSSYMPRV 140

>NU4M_CHICK (P18939) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 459

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = -2

Query: 146 PXHPKEMLLASSICFH-FIILLNCATEKVCFYVLFSA-YIPRLXLL 15
           P   K M +++ I    FIIL   ATE + FY+ F A  IP L L+
Sbjct: 88  PHKRKRMFISTLIIIQPFIILAFSATELMLFYISFEATLIPTLILI 133

>NU4M_MICPE (O21521) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4) (Fragment)
          Length = 208

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = -2

Query: 140 HPKEMLLASSICFHFIILLN-CATEKVCFYVLFSA-YIPRLXLL 15
           H K++ ++  +C   ++++   A E + FY+LF A  IP L ++
Sbjct: 90  HNKKLYISLLVCLQTLLIMTFSANELIMFYILFEATLIPTLIII 133


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,113,432
Number of Sequences: 219361
Number of extensions: 432994
Number of successful extensions: 929
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 80,573,946
effective HSP length: 42
effective length of database: 71,360,784
effective search space used: 1712658816
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)