ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags27d21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|U43718.1|TAU43718 Triticum aestivum pMA1951 mRNA, partial cds 573 e-160
2gb|AY057933.1| Bromus inermis stress-inducible membrane pore pro... 337 2e-89
3ref|NM_189221.1| Oryza sativa (japonica cultivar-group), predic... 224 2e-55
4gb|BT017732.1| Zea mays clone EL01N0448C02.c mRNA sequence 123 6e-25
5gb|AY111174.1| Zea mays CL27726_1 mRNA sequence 88 3e-14
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
7dbj|AP003206.4| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
8dbj|AP002871.2| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
9gb|AC144384.4| Pan troglodytes BAC clone CH251-456K17 from X, co... 42 1.7
10gb|AC145689.4| Pan troglodytes BAC clone CH251-184I22 from X, co... 42 1.7
11ref|NG_002382.2| Homo sapiens melanoma antigen pseudogene, famil... 42 1.7
12gb|U82671.5| Homo sapiens chromosome X multiple clones map q28, ... 42 1.7
13gb|AF002997.4| Homo sapiens chromosome X multiple clones map q28... 42 1.7
14gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
15gb|AC110540.7| Mus musculus chromosome 3, clone RP23-105B8, comp... 40 6.5
16gb|AC154993.9| Mus musculus chromosome 3, clone RP23-246L14, com... 40 6.5
17emb|AL442123.12| Human DNA sequence from clone RP11-175O19 on ch... 40 6.5
18emb|AJ632270.1| Actinoplanes teichomyceticus teicoplanin gene cl... 40 6.5
19emb|AJ605139.1| Actinoplanes teichomyceticus gene cluster for bi... 40 6.5
20gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 6.5
21emb|BX548047.12| Zebrafish DNA sequence from clone CH211-77G15 i... 40 6.5
22dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
23ref|XM_230571.3| PREDICTED: Rattus norvegicus similar to Adapter... 40 6.5
24emb|AL117187.7|CNS01DRD Human chromosome 14 DNA sequence BAC R-7... 40 6.5

>gb|U43718.1|TAU43718 Triticum aestivum pMA1951 mRNA, partial cds
          Length = 777

 Score =  573 bits (289), Expect = e-160
 Identities = 432/475 (90%), Gaps = 5/475 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gagaaattctaacgagnattcggacttgctcagttgcagggatggctagcagatggggca 64
           |||||||||||||||  |||||||||||||  || |||||  | ||||||||||||| ||
Sbjct: 37  gagaaattctaacga-aattcggacttgcttggtggcaggactagctagcagatgggaca 95

                                                                       
Query: 65  gagcgcgcaaagtgtcgaaggtacatggagaaatcaaggggaacgc--tac-acatttca 121
           |||||| |||| |||| ||||||||||||||||| ||||| ||  |  ||| || |||||
Sbjct: 96  gagcgcacaaactgtcaaaggtacatggagaaattaagggaaatacagtactacgtttca 155

                                                                       
Query: 122 agagctgctccgaatttctttagccctagccccacgctccatggcttagaatatgcctga 181
           || | |||||| |||||||| |||||| |||||||| |||   |||||||||||||| ||
Sbjct: 156 agtgttgctccaaatttctt-agccctcgccccacgttccgctgcttagaatatgccgga 214

                                                                       
Query: 182 gagcatggtcgccgcgctcgacagtgcggctccggtgatggcgaaatggacgacgtggtc 241
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 215 gagcatggtcgccgcgctcgacagtgcggctccggtgatggcgaaatgaacgacgtggtc 274

                                                                       
Query: 242 ggagtgcccgttgtcccctgtcagcgcgacggctgctccggcgatcgcccctgctatcgc 301
           |||||||||||||||||| ||||| ||||| || ||||||||||||||||||||||||||
Sbjct: 275 ggagtgcccgttgtccccggtcagggcgactgccgctccggcgatcgcccctgctatcgc 334

                                                                       
Query: 302 gctgttcttccagtcatggtgccctctggcctctctcaggccgtacgttatcccggagta 361
           ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 335 gctgttcttccagtcatggtgtcctctggcctctctcaggccgtacgttatcccagagta 394

                                                                       
Query: 362 caccccggctgccaatccccactggatggcctccttgcctgccgatttaaccactgcatc 421
            || |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 395 gactccggctgccaatccccactggatggcctccttgcttgccgatttaaccactgaatc 454

                                                                  
Query: 422 gagcgacttctggccgtcatcccctctggcgctcgagaagttgctcctcttggcg 476
           ||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 455 gagcgacttctggccgtcatcccctctggcgctcgagaaatggctcctcttggcg 509



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>gb|AY057933.1| Bromus inermis stress-inducible membrane pore protein (BG15) mRNA,
           complete cds
          Length = 819

 Score =  337 bits (170), Expect = 2e-89
 Identities = 275/310 (88%)
 Strand = Plus / Minus

                                                                       
Query: 167 ttagaatatgcctgagagcatggtcgccgcgctcgacagtgcggctccggtgatggcgaa 226
           |||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 595 ttagaatatgccggaaagcatggtcgccgcgcttgacagtgcggctccggtgatggcgaa 536

                                                                       
Query: 227 atggacgacgtggtcggagtgcccgttgtcccctgtcagcgcgacggctgctccggcgat 286
           |||||||||||||||||| |||||||||||||| ||||| ||||| || |||||||| | 
Sbjct: 535 atggacgacgtggtcggaatgcccgttgtccccggtcagggcgaccgcggctccggctag 476

                                                                       
Query: 287 cgcccctgctatcgcgctgttcttccagtcatggtgccctctggcctctctcaggccgta 346
            || || || || |||||||||||||||||||||  |||||||||||| ||||| |||||
Sbjct: 475 tgcaccagcgattgcgctgttcttccagtcatggcaccctctggcctccctcagaccgta 416

                                                                       
Query: 347 cgttatcccggagtacaccccggctgccaatccccactggatggcctccttgcctgccga 406
            || |  ||||||||||| |||||||| || |||||||||| |||||||||||| |||||
Sbjct: 415 ggtcaatccggagtacactccggctgctaacccccactggaaggcctccttgccggccga 356

                                                                       
Query: 407 tttaaccactgcatcgagcgacttctggccgtcatcccctctggcgctcgagaagttgct 466
           ||| |||||| | |||| |||||||||||| ||||||||||||||||||||||| | |||
Sbjct: 355 tttgaccactacttcgaacgacttctggccatcatcccctctggcgctcgagaaatggct 296

                     
Query: 467 cctcttggcg 476
           ||||||||||
Sbjct: 295 cctcttggcg 286



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>ref|NM_189221.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 792

 Score =  224 bits (113), Expect = 2e-55
 Identities = 236/277 (85%)
 Strand = Plus / Minus

                                                                       
Query: 172 atatgcctgagagcatggtcgccgcgctcgacagtgcggctccggtgatggcgaaatgga 231
           ||||||| ||||||| | ||||||| || || || ||||| |||||||||||||||||||
Sbjct: 787 atatgccggagagcaggctcgccgcactggaaagcgcggcgccggtgatggcgaaatgga 728

                                                                       
Query: 232 cgacgtggtcggagtgcccgttgtcccctgtcagcgcgacggctgctccggcgatcgccc 291
           | | |||||||| || |||| ||||||| |||||||| || ||  | || |||||||| |
Sbjct: 727 ccatgtggtcggcgttcccggtgtcccccgtcagcgccaccgccacgccagcgatcgcgc 668

                                                                       
Query: 292 ctgctatcgcgctgttcttccagtcatggtgccctctggcctctctcaggccgtacgtta 351
           | || | ||| ||||||||||||||||||  ||||||||||||||||||||||||||| |
Sbjct: 667 cggcgaccgcactgttcttccagtcatggcaccctctggcctctctcaggccgtacgtca 608

                                                                       
Query: 352 tcccggagtacaccccggctgccaatccccactggatggcctccttgcctgccgatttaa 411
             || |||||||||||||| ||||||||||||||||  |||||||| || || ||||| |
Sbjct: 607 gtccagagtacaccccggccgccaatccccactggaaagcctccttcccagcggatttta 548

                                                
Query: 412 ccactgcatcgagcgacttctggccgtcatcccctct 448
           |||| ||||| |||||||||||||| |||||||||||
Sbjct: 547 ccacggcatcaagcgacttctggccatcatcccctct 511



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>gb|BT017732.1| Zea mays clone EL01N0448C02.c mRNA sequence
          Length = 868

 Score =  123 bits (62), Expect = 6e-25
 Identities = 229/284 (80%), Gaps = 3/284 (1%)
 Strand = Plus / Minus

                                                                       
Query: 169 agaatatgcctgagagcatggtcgccgcgctcgacagtgcggctccggtgatggcgaaat 228
           |||||||||| ||||||| | || | ||||| || || ||||| |||||||||||||| |
Sbjct: 626 agaatatgccggagagcaagctcccggcgctggagagcgcggcgccggtgatggcgaagt 567

                                                                       
Query: 229 ggacgacgtggtcggagtgcccgttg---tcccctgtcagcgcgacggctgctccggcga 285
            |||||  | ||||||||| |||  |   || || || ||||| || || || || ||||
Sbjct: 566 tgacgagcttgtcggagtggccgccggcgtcacccgtgagcgccaccgccgccccagcga 507

                                                                       
Query: 286 tcgcccctgctatcgcgctgttcttccagtcatggtgccctctggcctctctcaggccgt 345
           | || ||||| || ||||||||||||||||| |||   || |||||||| | |||  |||
Sbjct: 506 tggcgcctgcgatggcgctgttcttccagtcgtggcatcccctggcctcccgcagcgcgt 447

                                                                       
Query: 346 acgttatcccggagtacaccccggctgccaatccccactggatggcctccttgcctgccg 405
           |||| | ||| ||||| || ||||||||||| |||||||||| |||||||||||| ||||
Sbjct: 446 acgtgagccctgagtagactccggctgccaacccccactggaaggcctccttgccggccg 387

                                                       
Query: 406 atttaaccactgcatcgagcgacttctggccgtcatcccctctg 449
            ||| |||||||| ||||||||| |||||||||| || ||||||
Sbjct: 386 tttttaccactgcgtcgagcgacctctggccgtcgtcacctctg 343



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>gb|AY111174.1| Zea mays CL27726_1 mRNA sequence
          Length = 802

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 222/284 (78%), Gaps = 3/284 (1%)
 Strand = Plus / Plus

                                                                       
Query: 169 agaatatgcctgagagcatggtcgccgcgctcgacagtgcggctccggtgatggcgaaat 228
           |||||||||| ||||||| | || | ||||| || || ||||| |||||||||||||| |
Sbjct: 192 agaatatgccggagagcaagctcccggcgctggagagcgcggcgccggtgatggcgaagt 251

                                                                       
Query: 229 ggacgacgtggtcggagtgcccgttg---tcccctgtcagcgcgacggctgctccggcga 285
            |||||  | ||||||||| |||  |   || || || ||||| || || || || ||||
Sbjct: 252 tgacgagcttgtcggagtggccgccggcgtcacccgtgagcgctaccgccgccccagcga 311

                                                                       
Query: 286 tcgcccctgctatcgcgctgttcttccagtcatggtgccctctggcctctctcaggccgt 345
           | || ||||| || ||||||||||||||||| |||   || |||||||| | |||  |||
Sbjct: 312 tggcgcctgcgatggcgctgttcttccagtcgtggcatcccctggcctcccgcagcgcgt 371

                                                                       
Query: 346 acgttatcccggagtacaccccggctgccaatccccactggatggcctccttgcctgccg 405
           |||| | ||| ||||| || |||||||||||     |||||| |||||||||||| ||||
Sbjct: 372 acgtgagccctgagtagactccggctgccaannnnnactggaaggcctccttgccggccg 431

                                                       
Query: 406 atttaaccactgcatcgagcgacttctggccgtcatcccctctg 449
                |||||||| ||||||||| |||||||||| || ||||||
Sbjct: 432 nnnnnaccactgcgtcgagcgacctctggccgtcgtcacctctg 475



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                            
Query: 311      ccagtcatggtgccctctggcctctctcaggccgtacgttatcccggagtacaccccggc 370
                ||||||||||  ||||||||||||||||||||||||||| |  || ||||||||||||||
Sbjct: 11220430 ccagtcatggcaccctctggcctctctcaggccgtacgtcagtccagagtacaccccggc 11220489

                         
Query: 371      tgccaatcc 379
                 ||||||||
Sbjct: 11220490 cgccaatcc 11220498



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                            
Query: 172      atatgcctgagagcatggtcgccgcgctcgacagtgcggctccggtgatggcgaaatgga 231
                ||||||| ||||||| | ||||||| || || || ||||| |||||||||||||||||||
Sbjct: 11220184 atatgccggagagcaggctcgccgcactggaaagcgcggcgccggtgatggcgaaatgga 11220243

                                                     
Query: 232      cgacgtggtcggagtgcccgttgtcccctgtcagcgc 268
                | | |||||||| || |||| ||||||| ||||||||
Sbjct: 11220244 ccatgtggtcggcgttcccggtgtcccccgtcagcgc 11220280



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                    
Query: 411      accactgcatcgagcgacttctggccgtcatcccct 446
                ||||| ||||| |||||||||||||| |||||||||
Sbjct: 11220733 accacggcatcaagcgacttctggccatcatcccct 11220768



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>dbj|AP003206.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1146F03
          Length = 137047

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                          
Query: 311    ccagtcatggtgccctctggcctctctcaggccgtacgttatcccggagtacaccccggc 370
              ||||||||||  ||||||||||||||||||||||||||| |  || ||||||||||||||
Sbjct: 112223 ccagtcatggcaccctctggcctctctcaggccgtacgtcagtccagagtacaccccggc 112282

                       
Query: 371    tgccaatcc 379
               ||||||||
Sbjct: 112283 cgccaatcc 112291



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                          
Query: 172    atatgcctgagagcatggtcgccgcgctcgacagtgcggctccggtgatggcgaaatgga 231
              ||||||| ||||||| | ||||||| || || || ||||| |||||||||||||||||||
Sbjct: 111977 atatgccggagagcaggctcgccgcactggaaagcgcggcgccggtgatggcgaaatgga 112036

                                                   
Query: 232    cgacgtggtcggagtgcccgttgtcccctgtcagcgc 268
              | | |||||||| || |||| ||||||| ||||||||
Sbjct: 112037 ccatgtggtcggcgttcccggtgtcccccgtcagcgc 112073



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 411    accactgcatcgagcgacttctggccgtcatcccct 446
              ||||| ||||| |||||||||||||| |||||||||
Sbjct: 112526 accacggcatcaagcgacttctggccatcatcccct 112561



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>dbj|AP002871.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0475H04
          Length = 143337

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                        
Query: 311  ccagtcatggtgccctctggcctctctcaggccgtacgttatcccggagtacaccccggc 370
            ||||||||||  ||||||||||||||||||||||||||| |  || ||||||||||||||
Sbjct: 7835 ccagtcatggcaccctctggcctctctcaggccgtacgtcagtccagagtacaccccggc 7894

                     
Query: 371  tgccaatcc 379
             ||||||||
Sbjct: 7895 cgccaatcc 7903



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                        
Query: 172  atatgcctgagagcatggtcgccgcgctcgacagtgcggctccggtgatggcgaaatgga 231
            ||||||| ||||||| | ||||||| || || || ||||| |||||||||||||||||||
Sbjct: 7589 atatgccggagagcaggctcgccgcactggaaagcgcggcgccggtgatggcgaaatgga 7648

                                                 
Query: 232  cgacgtggtcggagtgcccgttgtcccctgtcagcgc 268
            | | |||||||| || |||| ||||||| ||||||||
Sbjct: 7649 ccatgtggtcggcgttcccggtgtcccccgtcagcgc 7685



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                
Query: 411  accactgcatcgagcgacttctggccgtcatcccct 446
            ||||| ||||| |||||||||||||| |||||||||
Sbjct: 8138 accacggcatcaagcgacttctggccatcatcccct 8173



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>gb|AC144384.4| Pan troglodytes BAC clone CH251-456K17 from X, complete sequence
          Length = 220712

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 319    ggtgccctctggcctctctcaggcc 343
              ||||||||| |||||||||||||||
Sbjct: 122590 ggtgccctcaggcctctctcaggcc 122566



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>gb|AC145689.4| Pan troglodytes BAC clone CH251-184I22 from X, complete sequence
          Length = 181915

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 319   ggtgccctctggcctctctcaggcc 343
             ||||||||| |||||||||||||||
Sbjct: 75851 ggtgccctcaggcctctctcaggcc 75875



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>ref|NG_002382.2| Homo sapiens melanoma antigen pseudogene, family A (psMAGEA) on
            chromosome X
          Length = 5314

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 319  ggtgccctctggcctctctcaggcc 343
            ||||||||| |||||||||||||||
Sbjct: 1324 ggtgccctcgggcctctctcaggcc 1300



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>gb|U82671.5| Homo sapiens chromosome X multiple clones map q28, complete sequence
          Length = 324604

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 319   ggtgccctctggcctctctcaggcc 343
             ||||||||| |||||||||||||||
Sbjct: 76952 ggtgccctcgggcctctctcaggcc 76976



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>gb|AF002997.4| Homo sapiens chromosome X multiple clones map q28, complete sequence
          Length = 245179

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 319    ggtgccctctggcctctctcaggcc 343
              ||||||||| |||||||||||||||
Sbjct: 143202 ggtgccctcgggcctctctcaggcc 143178



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>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10,
             complete sequence
          Length = 149870

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   tagccctagccccacgctcc 161
             ||||||||||||||||||||
Sbjct: 58154 tagccctagccccacgctcc 58173



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>gb|AC110540.7| Mus musculus chromosome 3, clone RP23-105B8, complete sequence
          Length = 232416

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   tttctttagccctagcccca 155
             ||||||||||||||||||||
Sbjct: 17827 tttctttagccctagcccca 17846



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>gb|AC154993.9| Mus musculus chromosome 3, clone RP23-246L14, complete sequence
          Length = 208416

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    tttctttagccctagcccca 155
              ||||||||||||||||||||
Sbjct: 164111 tttctttagccctagcccca 164130



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>emb|AL442123.12| Human DNA sequence from clone RP11-175O19 on chromosome 10 Contains the
             3' end of the MLR2 gene for a novel protein (likely
             ortholog of mouse transcription factor MLR2), the gene for
             a novel protein novel protein (DKFZP564P1916)(FLJ13022),
             the 3' end of the SLIT1 gene for slit homolog 1
             (Drosophila) and a CpG island, complete sequence
          Length = 96660

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    ggctagcagatggggcagag 67
             ||||||||||||||||||||
Sbjct: 69332 ggctagcagatggggcagag 69351



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>emb|AJ632270.1| Actinoplanes teichomyceticus teicoplanin gene cluster
          Length = 89976

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   ggacgacgtggtcggagtgcccgt 252
             |||||| |||||||||||||||||
Sbjct: 57274 ggacgaggtggtcggagtgcccgt 57251



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>emb|AJ605139.1| Actinoplanes teichomyceticus gene cluster for biosynthesis of
             glycopeptide antibiotic teicoplanin
          Length = 89713

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   ggacgacgtggtcggagtgcccgt 252
             |||||| |||||||||||||||||
Sbjct: 63897 ggacgaggtggtcggagtgcccgt 63874



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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 325     ctctggcctctctcaggccg 344
               ||||||||||||||||||||
Sbjct: 3009064 ctctggcctctctcaggccg 3009083



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>emb|BX548047.12| Zebrafish DNA sequence from clone CH211-77G15 in linkage group 2,
              complete sequence
          Length = 179092

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 55     agatggggcagagcgcgcaaagtg 78
              |||||||||||| |||||||||||
Sbjct: 158865 agatggggcagaccgcgcaaagtg 158888



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 142      tagccctagccccacgctcc 161
                ||||||||||||||||||||
Sbjct: 20059829 tagccctagccccacgctcc 20059848



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>ref|XM_230571.3| PREDICTED: Rattus norvegicus similar to Adapter-related protein
            complex 4 epsilon 1 subunit (Epsilon subunit of AP-4)
            (AP-4 adapter complex epsilon subunit) (LOC311404), mRNA
          Length = 3402

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 463  tgctcctcttggcgctggtg 482
            ||||||||||||||||||||
Sbjct: 1955 tgctcctcttggcgctggtg 1936



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>emb|AL117187.7|CNS01DRD Human chromosome 14 DNA sequence BAC R-725G5 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 195835

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    gatggctagcagatggggca 64
             ||||||||||||||||||||
Sbjct: 27474 gatggctagcagatggggca 27493


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,997,463
Number of Sequences: 3902068
Number of extensions: 2997463
Number of successful extensions: 50217
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50089
Number of HSP's gapped (non-prelim): 126
length of query: 483
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 461
effective length of database: 17,147,199,772
effective search space: 7904859094892
effective search space used: 7904859094892
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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