| Clone Name | rbags26o05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome Length = 1767403 Score = 40.1 bits (20), Expect = 1.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 acaatacaacacaatatacc 20 |||||||||||||||||||| Sbjct: 942936 acaatacaacacaatatacc 942955
>gb|AC159636.3| Mus musculus BAC clone RP24-93H15 from chromosome 12, complete sequence Length = 184821 Score = 40.1 bits (20), Expect = 1.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 taacaacaacaacactttct 68 |||||||||||||||||||| Sbjct: 104019 taacaacaacaacactttct 104000
>ref|XM_637430.1| Dictyostelium discoideum hypothetical protein (DDB0218010), partial mRNA Length = 5757 Score = 38.2 bits (19), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 51 acaacaacaacactttctacaac 73 ||||||||||||| ||||||||| Sbjct: 3519 acaacaacaacaccttctacaac 3541
>gb|AC120413.20| Mus musculus chromosome 5, clone RP24-458L16, complete sequence Length = 163011 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 50 aacaacaacaacactttct 68 ||||||||||||||||||| Sbjct: 125722 aacaacaacaacactttct 125704
>gb|AC150555.1| Drosophila melanogaster clone BACR26G12, complete sequence Length = 164461 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 50 aacaacaacaacactttct 68 ||||||||||||||||||| Sbjct: 66988 aacaacaacaacactttct 67006
>gb|AC114657.8| Mus musculus chromosome 5, clone RP24-161C20, complete sequence Length = 161173 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 50 aacaacaacaacactttct 68 ||||||||||||||||||| Sbjct: 142149 aacaacaacaacactttct 142167
>gb|AC010976.6| Homo sapiens BAC clone RP11-286H15 from 2, complete sequence Length = 204142 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 50 aacaacaacaacactttct 68 ||||||||||||||||||| Sbjct: 153341 aacaacaacaacactttct 153359
>gb|AC123057.4| Mus musculus BAC clone RP23-184N6 from 3, complete sequence Length = 223068 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 77 gctgggctttcctttctta 95 ||||||||||||||||||| Sbjct: 77394 gctgggctttcctttctta 77412
>gb|AC105950.11| Mus musculus chromosome 12, clone RP24-386J17, complete sequence Length = 192207 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 50 aacaacaacaacactttct 68 ||||||||||||||||||| Sbjct: 55660 aacaacaacaacactttct 55678
>gb|U40955.1| Caenorhabditis elegans cosmid F48B9, complete sequence Length = 40014 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 48 ataacaacaacaacacttt 66 ||||||||||||||||||| Sbjct: 23070 ataacaacaacaacacttt 23052
>emb|AL691515.9| Human DNA sequence from clone RP11-316I3 on chromosome 1 Contains two novel genes, complete sequence Length = 199421 Score = 38.2 bits (19), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 50 aacaacaacaacactttctacaa 72 |||||||||||||||||| |||| Sbjct: 132783 aacaacaacaacactttccacaa 132805
>emb|BX045788.1|CNS097HS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC2AD09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 187 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 50 aacaacaacaacactttct 68 ||||||||||||||||||| Sbjct: 111 aacaacaacaacactttct 93
>emb|AL670769.3| Mouse DNA sequence from clone RP23-375J5 on chromosome 4 Contains two novel genes and a nudix (nucleoside diphosphate linked moiety X)-type motif (Nudt) pseudogene, complete sequence Length = 180238 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 24 gtatgggagcaagtacaga 42 ||||||||||||||||||| Sbjct: 56945 gtatgggagcaagtacaga 56963
>gb|AC011146.10| Homo sapiens chromosome 8, clone RP11-2F15, complete sequence Length = 156951 Score = 38.2 bits (19), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 50 aacaacaacaacactttctacaa 72 ||||||||||||| ||||||||| Sbjct: 122151 aacaacaacaacattttctacaa 122173
>gb|AC154575.2| Mus musculus BAC clone RP23-248E1 from chromosome 14, complete sequence Length = 210912 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 48 ataacaacaacaacacttt 66 ||||||||||||||||||| Sbjct: 64304 ataacaacaacaacacttt 64286
>gb|AC093333.7| Homo sapiens chromosome 8, clone RP11-470N15, complete sequence Length = 187680 Score = 38.2 bits (19), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 50 aacaacaacaacactttctacaa 72 ||||||||||||| ||||||||| Sbjct: 28324 aacaacaacaacattttctacaa 28346
>gb|AC093523.3| Homo sapiens chromosome 5 clone RP11-181E7, complete sequence Length = 156592 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 48 ataacaacaacaacacttt 66 ||||||||||||||||||| Sbjct: 38278 ataacaacaacaacacttt 38296
>gb|AC007299.18|AC007299 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR07D23, complete sequence Length = 176610 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 50 aacaacaacaacactttct 68 ||||||||||||||||||| Sbjct: 109623 aacaacaacaacactttct 109605
>gb|AC012500.7| Homo sapiens BAC clone RP11-434M17 from 2, complete sequence Length = 117763 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 50 aacaacaacaacactttct 68 ||||||||||||||||||| Sbjct: 78671 aacaacaacaacactttct 78653
>gb|AC116919.2| Dictyostelium discoideum chromosome 2 map complement(6245035-6206343) strain AX4, complete sequence Length = 38692 Score = 38.2 bits (19), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 51 acaacaacaacactttctacaac 73 ||||||||||||| ||||||||| Sbjct: 7083 acaacaacaacaccttctacaac 7105
>emb|BX248418.16| Zebrafish DNA sequence from clone DKEY-181I3 in linkage group 20, complete sequence Length = 152757 Score = 38.2 bits (19), Expect = 4.5 Identities = 21/22 (95%) Strand = Plus / Minus Query: 42 acaagnataacaacaacaacac 63 ||||| |||||||||||||||| Sbjct: 27835 acaagcataacaacaacaacac 27814
>gb|AE003625.3| Drosophila melanogaster chromosome 2L, section 34 of 83 of the complete sequence Length = 271507 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 50 aacaacaacaacactttct 68 ||||||||||||||||||| Sbjct: 49824 aacaacaacaacactttct 49806
>emb|AL606929.13| Mouse DNA sequence from clone RP23-139J21 on chromosome 4, complete sequence Length = 198728 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 50 aacaacaacaacactttct 68 ||||||||||||||||||| Sbjct: 181206 aacaacaacaacactttct 181188
>emb|AL591882.12| Mouse DNA sequence from clone RP23-53L16 on chromosome 2, complete sequence Length = 251814 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 50 aacaacaacaacactttct 68 ||||||||||||||||||| Sbjct: 130302 aacaacaacaacactttct 130320 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,834,072 Number of Sequences: 3902068 Number of extensions: 1834072 Number of successful extensions: 561101 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 560825 Number of HSP's gapped (non-prelim): 276 length of query: 101 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 80 effective length of database: 17,151,101,840 effective search space: 1372088147200 effective search space used: 1372088147200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)