ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags26n10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK067189.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 7e-49
2dbj|AK062085.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 7e-49
3gb|AY107197.1| Zea mays PCO140653 mRNA sequence 200 3e-48
4ref|XM_482181.1| Oryza sativa (japonica cultivar-group), mRNA 125 1e-25
5dbj|AK065108.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 119 8e-24
7dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic D... 119 8e-24
8dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
9dbj|AP005502.3| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
10dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic D... 84 4e-13
11ref|XM_482165.1| Oryza sativa (japonica cultivar-group), mRNA 76 1e-10
12dbj|AK120787.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
13gb|AF420410.1|AF420410 Musa acuminata clone PeCav 9 hypothetical... 70 7e-09
14dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
15gb|DQ062725.1| Brassica napus unknown mRNA 48 0.024
16ref|NM_179737.1| Arabidopsis thaliana unknown protein AT2G25737 ... 46 0.096
17gb|AY136387.1| Arabidopsis thaliana unknown protein (At2g25740) ... 46 0.096
18gb|AC006053.3| Arabidopsis thaliana chromosome 2 clone F3N11 map... 46 0.096
19gb|AC005395.3| Arabidopsis thaliana chromosome 2 clone F17H15 ma... 46 0.096
20gb|BT005381.1| Arabidopsis thaliana At2g25737 mRNA, complete cds 46 0.096
21dbj|AK117723.1| Arabidopsis thaliana At2g25740 mRNA for unknown ... 46 0.096
22gb|BT002106.1| Arabidopsis thaliana unknown protein (At2g25740) ... 46 0.096
23emb|CR293511.11| Zebrafish DNA sequence from clone DKEY-93H22 in... 42 1.5
24gb|AC161467.2| Gallus gallus BAC clone CH261-89H14 from chromoso... 42 1.5
25ref|XM_520975.1| PREDICTED: Pan troglodytes similar to ACATE2 pr... 40 5.9
26gb|AC069539.5| Homo sapiens chromosome 11 clone RP11-321E15, com... 40 5.9
27gb|AC105459.1| Homo sapiens BAC clone RP11-115D14 from 7, comple... 40 5.9
28ref|NM_001014368.1| Homo sapiens heat shock protein 90kDa alpha ... 40 5.9
29gb|AC073314.4| Homo sapiens BAC clone RP11-143I21 from 7, comple... 40 5.9
30emb|AL662904.4| Human DNA sequence from clone RP11-157N3 on chro... 40 5.9
31emb|AL355576.14| Human DNA sequence from clone RP11-305F4 on chr... 40 5.9
32emb|AL121724.19|HSDJ29P5 Human DNA sequence from clone RP1-29P5 ... 40 5.9
33gb|AC144544.4| Homo sapiens 3 BAC RP13-687A4 (Roswell Park Cance... 40 5.9
34gb|AC005345.1| Homo sapiens Xp22-144-145 BAC GSHB-541M1 (Genome ... 40 5.9
35emb|BX530077.4| Zebrafish DNA sequence from clone CH211-22D5 in ... 40 5.9
36gb|AC161471.3| Gallus gallus BAC clone CH261-21B3 from chromosom... 40 5.9
37gb|AC107082.3| Homo sapiens BAC clone RP11-807A15 from 2, comple... 40 5.9
38gb|AC095058.3| Homo sapiens BAC clone RP11-416A5 from 4, complet... 40 5.9
39gb|AC012309.8| Homo sapiens chromosome 19 clone CTC-454I21, comp... 40 5.9
40gb|AC010632.7| Homo sapiens chromosome 19 clone CTD-2293H3, comp... 40 5.9
41gb|AC146058.2| Pan troglodytes BAC clone RP43-92A10 from chromos... 40 5.9
42gb|AC005079.6|AC005079 Homo sapiens BAC clone CTA-252P22 from 7,... 40 5.9
43emb|BX855621.15| Zebrafish DNA sequence from clone CH211-225C13,... 40 5.9
44dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
45gb|AC093722.2| Homo sapiens BAC clone CTD-2012I17 from 4, comple... 40 5.9
46gb|AC147975.3| Pan troglodytes BAC clone CH251-510J15 from chrom... 40 5.9
47dbj|AP002525.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
48emb|BX648512.1|HSM808660 Homo sapiens mRNA; cDNA DKFZp686K1372 (... 40 5.9
49gb|AY956763.1| Homo sapiens heat shock protein 90Bb (HSP90Bb) mR... 40 5.9
50gb|AC006226.4|AC006226 Homo sapiens chromosome 4 clone C0011C13 ... 40 5.9
51ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) ... 40 5.9
52dbj|AP000868.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 5.9
53ref|NM_001037171.1| Homo sapiens acyl-CoA thioesterase 9 (ACOT9)... 40 5.9
54dbj|AB019438.1| Homo sapiens DNA for immunoglobulin heavy-chain ... 40 5.9 
>dbj|AK067189.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096A09, full
            insert sequence
          Length = 1991

 Score =  202 bits (102), Expect = 7e-49
 Identities = 153/170 (90%)
 Strand = Plus / Minus

                                                                        
Query: 270  tcctatgcatcatacttgcagaggttctcaaaccccatgtactcatgttgctcaatcttg 329
            ||||| |||||||| ||||| ||||||||||||||||||||||||||||| |  ||| | 
Sbjct: 1659 tcctacgcatcatatttgcaaaggttctcaaaccccatgtactcatgttggttgatccta 1600

                                                                        
Query: 330  tgaatcatgttcgagataccaaccccaccgagagaaattgcgctgacgaagatcatgaaa 389
            ||||||||||| ||||| ||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 1599 tgaatcatgtttgagatgccaactccacctagagaaattgcgctgacaaagatcatgaaa 1540

                                                              
Query: 390  gccagtatgaagatgatgagcgatgcccgccctaaccaactgatcaacct 439
            ||||  ||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 1539 gccaaaatgaagatgatgagcgatgcccgtcctaaccaattgatcaacct 1490
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>dbj|AK062085.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-G03, full
            insert sequence
          Length = 1958

 Score =  202 bits (102), Expect = 7e-49
 Identities = 153/170 (90%)
 Strand = Plus / Minus

                                                                        
Query: 270  tcctatgcatcatacttgcagaggttctcaaaccccatgtactcatgttgctcaatcttg 329
            ||||| |||||||| ||||| ||||||||||||||||||||||||||||| |  ||| | 
Sbjct: 1624 tcctacgcatcatatttgcaaaggttctcaaaccccatgtactcatgttggttgatccta 1565

                                                                        
Query: 330  tgaatcatgttcgagataccaaccccaccgagagaaattgcgctgacgaagatcatgaaa 389
            ||||||||||| ||||| ||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct: 1564 tgaatcatgtttgagatgccaactccacctagagaaattgcgctgacaaagatcatgaaa 1505

                                                              
Query: 390  gccagtatgaagatgatgagcgatgcccgccctaaccaactgatcaacct 439
            ||||  ||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 1504 gccaaaatgaagatgatgagcgatgcccgtcctaaccaattgatcaacct 1455
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>gb|AY107197.1| Zea mays PCO140653 mRNA sequence
          Length = 1716

 Score =  200 bits (101), Expect = 3e-48
 Identities = 149/165 (90%)
 Strand = Plus / Minus

                                                                        
Query: 273  tatgcatcatacttgcagaggttctcaaaccccatgtactcatgttgctcaatcttgtga 332
            |||||||| |||||||| |||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 1369 tatgcatcgtacttgcaaaggtcctcaaaccccatgtactcatgtcgctcaatcttgtga 1310

                                                                        
Query: 333  atcatgttcgagataccaaccccaccgagagaaattgcgctgacgaagatcatgaaagcc 392
            | |||||| ||||  |||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 1309 accatgttagagacgccaaccccaccgagagaaatcgcgctgacaaagatcatgaaagcc 1250

                                                         
Query: 393  agtatgaagatgatgagcgatgcccgccctaaccaactgatcaac 437
            |||||||||||||| || ||||| ||||||| |||  ||||||||
Sbjct: 1249 agtatgaagatgataagtgatgctcgccctagccagttgatcaac 1205
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>ref|XM_482181.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1924

 Score =  125 bits (63), Expect = 1e-25
 Identities = 135/159 (84%)
 Strand = Plus / Minus

                                                                        
Query: 277  catcatacttgcagaggttctcaaaccccatgtactcatgttgctcaatcttgtgaatca 336
            ||||||| ||||||| ||| || || ||||||||||| ||| || ||||||||  |||||
Sbjct: 1581 catcataattgcagatgttgtcgaaacccatgtactcgtgtcgcgcaatcttgccaatca 1522

                                                                        
Query: 337  tgttcgagataccaaccccaccgagagaaattgcgctgacgaagatcatgaaagccagta 396
            |||| ||||| || || ||||| || || |||||||||| |||||||||||| | ||| |
Sbjct: 1521 tgttggagatgccgactccacctagtgagattgcgctgatgaagatcatgaaggacagaa 1462

                                                   
Query: 397  tgaagatgatgagcgatgcccgccctaaccaactgatca 435
            ||||||| ||||| |||||||||||||||||| ||||||
Sbjct: 1461 tgaagataatgagtgatgcccgccctaaccaattgatca 1423
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>dbj|AK065108.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001N20, full
            insert sequence
          Length = 1924

 Score =  125 bits (63), Expect = 1e-25
 Identities = 135/159 (84%)
 Strand = Plus / Minus

                                                                        
Query: 277  catcatacttgcagaggttctcaaaccccatgtactcatgttgctcaatcttgtgaatca 336
            ||||||| ||||||| ||| || || ||||||||||| ||| || ||||||||  |||||
Sbjct: 1581 catcataattgcagatgttgtcgaaacccatgtactcgtgtcgcgcaatcttgccaatca 1522

                                                                        
Query: 337  tgttcgagataccaaccccaccgagagaaattgcgctgacgaagatcatgaaagccagta 396
            |||| ||||| || || ||||| || || |||||||||| |||||||||||| | ||| |
Sbjct: 1521 tgttggagatgccgactccacctagtgagattgcgctgatgaagatcatgaaggacagaa 1462

                                                   
Query: 397  tgaagatgatgagcgatgcccgccctaaccaactgatca 435
            ||||||| ||||| |||||||||||||||||| ||||||
Sbjct: 1461 tgaagataatgagtgatgcccgccctaaccaattgatca 1423
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  119 bits (60), Expect = 8e-24
 Identities = 75/80 (93%)
 Strand = Plus / Minus

                                                                            
Query: 360      agagaaattgcgctgacgaagatcatgaaagccagtatgaagatgatgagcgatgcccgc 419
                ||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||| 
Sbjct: 10714746 agagaaattgcgctgacaaagatcatgaaagccaaaatgaagatgatgagcgatgcccgt 10714687

                                    
Query: 420      cctaaccaactgatcaacct 439
                ||||||||| ||||||||||
Sbjct: 10714686 cctaaccaattgatcaacct 10714667



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                            
Query: 270      tcctatgcatcatacttgcagaggttctcaaaccccatgtactcatgttgctcaatcttg 329
                ||||| |||||||| ||||| ||||||||||||||||||||||||||||| |  ||| | 
Sbjct: 10714921 tcctacgcatcatatttgcaaaggttctcaaaccccatgtactcatgttggttgatccta 10714862

                                             
Query: 330      tgaatcatgttcgagataccaaccccacc 358
                ||||||||||| ||||| ||||| |||||
Sbjct: 10714861 tgaatcatgtttgagatgccaactccacc 10714833
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>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0085I16
          Length = 141701

 Score =  119 bits (60), Expect = 8e-24
 Identities = 75/80 (93%)
 Strand = Plus / Minus

                                                                         
Query: 360   agagaaattgcgctgacgaagatcatgaaagccagtatgaagatgatgagcgatgcccgc 419
             ||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||| 
Sbjct: 51364 agagaaattgcgctgacaaagatcatgaaagccaaaatgaagatgatgagcgatgcccgt 51305

                                 
Query: 420   cctaaccaactgatcaacct 439
             ||||||||| ||||||||||
Sbjct: 51304 cctaaccaattgatcaacct 51285



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                         
Query: 270   tcctatgcatcatacttgcagaggttctcaaaccccatgtactcatgttgctcaatcttg 329
             ||||| |||||||| ||||| ||||||||||||||||||||||||||||| |  ||| | 
Sbjct: 51539 tcctacgcatcatatttgcaaaggttctcaaaccccatgtactcatgttggttgatccta 51480

                                          
Query: 330   tgaatcatgttcgagataccaaccccacc 358
             ||||||||||| ||||| ||||| |||||
Sbjct: 51479 tgaatcatgtttgagatgccaactccacc 51451
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                            
Query: 366      attgcgctgacgaagatcatgaaagccagtatgaagatgatgagcgatgcccgccctaac 425
                |||||||||| |||||||||||| | ||| |||||||| ||||| |||||||||||||||
Sbjct: 18450291 attgcgctgatgaagatcatgaaggacagaatgaagataatgagtgatgcccgccctaac 18450232

                          
Query: 426      caactgatca 435
                ||| ||||||
Sbjct: 18450231 caattgatca 18450222



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                            
Query: 270      tcctatgcatcatacttgcagaggttctcaaaccccatgtactcatgttgctcaatcttg 329
                |||||||||||| ||||||| | ||  || || ||||||||||||||| |||||||||||
Sbjct: 18291674 tcctatgcatcaaacttgcatatgtcttcgaatcccatgtactcatgtcgctcaatcttg 18291615



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                            
Query: 277      catcatacttgcagaggttctcaaaccccatgtactcatgttgctcaatcttgtgaatca 336
                ||||||| ||||||| ||| || || ||||||||||| ||| || ||||||||  |||||
Sbjct: 18450471 catcataattgcagatgttgtcgaaacccatgtactcgtgtcgcgcaatcttgccaatca 18450412

                          
Query: 337      tgttcgagat 346
                |||| |||||
Sbjct: 18450411 tgttggagat 18450402



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                            
Query: 372      ctgacgaagatcatgaaagccagtatgaagatgatgagcgatgcccgccctaaccaactg 431
                |||| |||||||||||  | || | ||||||| |||| |||||| |||||||||||| ||
Sbjct: 18291475 ctgaggaagatcatgatggacaatgtgaagataatgatcgatgcacgccctaaccaattg 18291416

                    
Query: 432      atca 435
                ||||
Sbjct: 18291415 atca 18291412
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>dbj|AP005502.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0473F05
          Length = 140575

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                          
Query: 366    attgcgctgacgaagatcatgaaagccagtatgaagatgatgagcgatgcccgccctaac 425
              |||||||||| |||||||||||| | ||| |||||||| ||||| |||||||||||||||
Sbjct: 136460 attgcgctgatgaagatcatgaaggacagaatgaagataatgagtgatgcccgccctaac 136401

                        
Query: 426    caactgatca 435
              ||| ||||||
Sbjct: 136400 caattgatca 136391



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                          
Query: 277    catcatacttgcagaggttctcaaaccccatgtactcatgttgctcaatcttgtgaatca 336
              ||||||| ||||||| ||| || || ||||||||||| ||| || ||||||||  |||||
Sbjct: 136640 catcataattgcagatgttgtcgaaacccatgtactcgtgtcgcgcaatcttgccaatca 136581

                        
Query: 337    tgttcgagat 346
              |||| |||||
Sbjct: 136580 tgttggagat 136571
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>dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0671F11
          Length = 159409

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                         
Query: 366   attgcgctgacgaagatcatgaaagccagtatgaagatgatgagcgatgcccgccctaac 425
             |||||||||| |||||||||||| | ||| |||||||| ||||| |||||||||||||||
Sbjct: 32314 attgcgctgatgaagatcatgaaggacagaatgaagataatgagtgatgcccgccctaac 32255

                       
Query: 426   caactgatca 435
             ||| ||||||
Sbjct: 32254 caattgatca 32245



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                         
Query: 277   catcatacttgcagaggttctcaaaccccatgtactcatgttgctcaatcttgtgaatca 336
             ||||||| ||||||| ||| || || ||||||||||| ||| || ||||||||  |||||
Sbjct: 32494 catcataattgcagatgttgtcgaaacccatgtactcgtgtcgcgcaatcttgccaatca 32435

                       
Query: 337   tgttcgagat 346
             |||| |||||
Sbjct: 32434 tgttggagat 32425
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>ref|XM_482165.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1875

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 134/166 (80%)
 Strand = Plus / Minus

                                                                        
Query: 270  tcctatgcatcatacttgcagaggttctcaaaccccatgtactcatgttgctcaatcttg 329
            |||||||||||| ||||||| | ||  || || ||||||||||||||| |||||||||||
Sbjct: 1654 tcctatgcatcaaacttgcatatgtcttcgaatcccatgtactcatgtcgctcaatcttg 1595

                                                                        
Query: 330  tgaatcatgttcgagataccaaccccaccgagagaaattgcgctgacgaagatcatgaaa 389
              ||||  ||||  |||||| |  ||||| ||||  ||||  |||| |||||||||||  
Sbjct: 1594 ccaatccagttcacgataccgattccacctagagggattgtactgaggaagatcatgatg 1535

                                                          
Query: 390  gccagtatgaagatgatgagcgatgcccgccctaaccaactgatca 435
            | || | ||||||| |||| |||||| |||||||||||| ||||||
Sbjct: 1534 gacaatgtgaagataatgatcgatgcacgccctaaccaattgatca 1489
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>dbj|AK120787.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011G24, full
            insert sequence
          Length = 1875

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 134/166 (80%)
 Strand = Plus / Minus

                                                                        
Query: 270  tcctatgcatcatacttgcagaggttctcaaaccccatgtactcatgttgctcaatcttg 329
            |||||||||||| ||||||| | ||  || || ||||||||||||||| |||||||||||
Sbjct: 1654 tcctatgcatcaaacttgcatatgtcttcgaatcccatgtactcatgtcgctcaatcttg 1595

                                                                        
Query: 330  tgaatcatgttcgagataccaaccccaccgagagaaattgcgctgacgaagatcatgaaa 389
              ||||  ||||  |||||| |  ||||| ||||  ||||  |||| |||||||||||  
Sbjct: 1594 ccaatccagttcacgataccgattccacctagagggattgtactgaggaagatcatgatg 1535

                                                          
Query: 390  gccagtatgaagatgatgagcgatgcccgccctaaccaactgatca 435
            | || | ||||||| |||| |||||| |||||||||||| ||||||
Sbjct: 1534 gacaatgtgaagataatgatcgatgcacgccctaaccaattgatca 1489
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>gb|AF420410.1|AF420410 Musa acuminata clone PeCav 9 hypothetical protein mRNA, partial cds
          Length = 715

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 75/87 (86%), Gaps = 1/87 (1%)
 Strand = Plus / Minus

                                                                       
Query: 272 ctatgcatcatacttgcagaggttctcaaaccccatgtactcatgttgctcaatcttgtg 331
           |||||| |||||||||||||| ||||||||||||||| |||| || ||||  ||||| ||
Sbjct: 621 ctatgcttcatacttgcagagattctcaaaccccatg-actcgtgatgctggatcttttg 563

                                      
Query: 332 aatcatgttcgagataccaaccccacc 358
           || ||||||||| || ||||| |||||
Sbjct: 562 aaccatgttcgaaatgccaactccacc 536
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>dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0434E03
          Length = 142414

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                          
Query: 270    tcctatgcatcatacttgcagaggttctcaaaccccatgtactcatgttgctcaatcttg 329
              |||||||||||| ||||||| | ||  || || ||||||||||||||| |||||||||||
Sbjct: 113986 tcctatgcatcaaacttgcatatgtcttcgaatcccatgtactcatgtcgctcaatcttg 113927



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                          
Query: 372    ctgacgaagatcatgaaagccagtatgaagatgatgagcgatgcccgccctaaccaactg 431
              |||| |||||||||||  | || | ||||||| |||| |||||| |||||||||||| ||
Sbjct: 113787 ctgaggaagatcatgatggacaatgtgaagataatgatcgatgcacgccctaaccaattg 113728

                  
Query: 432    atca 435
              ||||
Sbjct: 113727 atca 113724
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>gb|DQ062725.1| Brassica napus unknown mRNA
          Length = 1047

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 282  tacttgcagaggttctcaaaccccatgtactc 313
            |||||||||||||| ||||| |||||||||||
Sbjct: 1037 tacttgcagaggttttcaaaacccatgtactc 1006
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>ref|NM_179737.1| Arabidopsis thaliana unknown protein AT2G25737 mRNA, complete cds
          Length = 1892

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 282  tacttgcagaggttctcaaaccccatgtactcatg 316
            |||||||| |||||||| || ||||||||||||||
Sbjct: 1659 tacttgcaaaggttctcgaaacccatgtactcatg 1625
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>gb|AY136387.1| Arabidopsis thaliana unknown protein (At2g25740) mRNA, complete cds
          Length = 1746

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 282  tacttgcagaggttctcaaaccccatgtactcatg 316
            |||||||| |||||||| || ||||||||||||||
Sbjct: 1515 tacttgcaaaggttctcgaaacccatgtactcatg 1481
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>gb|AC006053.3| Arabidopsis thaliana chromosome 2 clone F3N11 map B68, complete
             sequence
          Length = 100745

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 282   tacttgcagaggttctcaaaccccatgtactcatg 316
             |||||||| |||||||| || ||||||||||||||
Sbjct: 96631 tacttgcaaaggttctcgaaacccatgtactcatg 96597
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>gb|AC005395.3| Arabidopsis thaliana chromosome 2 clone F17H15 map B68, complete
             sequence
          Length = 102004

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 282   tacttgcagaggttctcaaaccccatgtactcatg 316
             |||||||| |||||||| || ||||||||||||||
Sbjct: 96305 tacttgcaaaggttctcgaaacccatgtactcatg 96339
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>gb|BT005381.1| Arabidopsis thaliana At2g25737 mRNA, complete cds
          Length = 1431

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 282  tacttgcagaggttctcaaaccccatgtactcatg 316
            |||||||| |||||||| || ||||||||||||||
Sbjct: 1421 tacttgcaaaggttctcgaaacccatgtactcatg 1387
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>dbj|AK117723.1| Arabidopsis thaliana At2g25740 mRNA for unknown protein, complete
            cds, clone: RAFL17-40-J21
          Length = 1892

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 282  tacttgcagaggttctcaaaccccatgtactcatg 316
            |||||||| |||||||| || ||||||||||||||
Sbjct: 1659 tacttgcaaaggttctcgaaacccatgtactcatg 1625
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>gb|BT002106.1| Arabidopsis thaliana unknown protein (At2g25740) mRNA, complete cds
          Length = 1623

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 282  tacttgcagaggttctcaaaccccatgtactcatg 316
            |||||||| |||||||| || ||||||||||||||
Sbjct: 1421 tacttgcaaaggttctcgaaacccatgtactcatg 1387
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>emb|CR293511.11| Zebrafish DNA sequence from clone DKEY-93H22 in linkage group 1, complete
              sequence
          Length = 178953

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 149    tagattaccttctgattacat 169
              |||||||||||||||||||||
Sbjct: 163647 tagattaccttctgattacat 163627
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>gb|AC161467.2| Gallus gallus BAC clone CH261-89H14 from chromosome unknown, complete
             sequence
          Length = 308703

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 286   tgcagaggttctcaaacccca 306
             |||||||||||||||||||||
Sbjct: 87654 tgcagaggttctcaaacccca 87674
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>ref|XM_520975.1| PREDICTED: Pan troglodytes similar to ACATE2 protein (LOC465537),
           mRNA
          Length = 877

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 328 tgtgaatcatgttcgagata 347
           ||||||||||||||||||||
Sbjct: 273 tgtgaatcatgttcgagata 292
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>gb|AC069539.5| Homo sapiens chromosome 11 clone RP11-321E15, complete sequence
          Length = 181471

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     actgaaaattcagaaatcag 74
              ||||||||||||||||||||
Sbjct: 164643 actgaaaattcagaaatcag 164662
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>gb|AC105459.1| Homo sapiens BAC clone RP11-115D14 from 7, complete sequence
          Length = 146098

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   gcagaggttctcaaacccca 306
             ||||||||||||||||||||
Sbjct: 29050 gcagaggttctcaaacccca 29031
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>ref|NM_001014368.1| Homo sapiens heat shock protein 90kDa alpha (cytosolic), class B
            member 2 (pseudogene) (HSP90AB2P), mRNA
          Length = 1269

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 283  acttgcagaggttctcaaac 302
            ||||||||||||||||||||
Sbjct: 1138 acttgcagaggttctcaaac 1119
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>gb|AC073314.4| Homo sapiens BAC clone RP11-143I21 from 7, complete sequence
          Length = 73888

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    taaactgaaaattcagaaat 71
             ||||||||||||||||||||
Sbjct: 65790 taaactgaaaattcagaaat 65771
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>emb|AL662904.4| Human DNA sequence from clone RP11-157N3 on chromosome 1 Contains the
             3' end of a novel gene, complete sequence
          Length = 111042

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   gcagaggttctcaaacccca 306
             ||||||||||||||||||||
Sbjct: 34590 gcagaggttctcaaacccca 34609
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>emb|AL355576.14| Human DNA sequence from clone RP11-305F4 on chromosome 13, complete
              sequence
          Length = 148744

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    gcagaggttctcaaacccca 306
              ||||||||||||||||||||
Sbjct: 112236 gcagaggttctcaaacccca 112217
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>emb|AL121724.19|HSDJ29P5 Human DNA sequence from clone RP1-29P5 on chromosome 6q16.1-16.2,
             complete sequence
          Length = 113644

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    taaactgaaaattcagaaat 71
             ||||||||||||||||||||
Sbjct: 84871 taaactgaaaattcagaaat 84890
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>gb|AC144544.4| Homo sapiens 3 BAC RP13-687A4 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 15113

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  gcagaggttctcaaacccca 306
            ||||||||||||||||||||
Sbjct: 9714 gcagaggttctcaaacccca 9695
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>gb|AC005345.1| Homo sapiens Xp22-144-145 BAC GSHB-541M1 (Genome Systems Human BAC
              Library) complete sequence
          Length = 160439

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    taaacatttgaaacctgaac 192
              ||||||||||||||||||||
Sbjct: 140999 taaacatttgaaacctgaac 141018
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>emb|BX530077.4| Zebrafish DNA sequence from clone CH211-22D5 in linkage group 21,
             complete sequence
          Length = 200625

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   attacatggctaaacatttg 182
             ||||||||||||||||||||
Sbjct: 57920 attacatggctaaacatttg 57901
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>gb|AC161471.3| Gallus gallus BAC clone CH261-21B3 from chromosome ul, complete sequence
          Length = 205759

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     gaattgactttaaactgaaa 61
              ||||||||||||||||||||
Sbjct: 143884 gaattgactttaaactgaaa 143903
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>gb|AC107082.3| Homo sapiens BAC clone RP11-807A15 from 2, complete sequence
          Length = 112944

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  gcagaggttctcaaacccca 306
            ||||||||||||||||||||
Sbjct: 5182 gcagaggttctcaaacccca 5163
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>gb|AC095058.3| Homo sapiens BAC clone RP11-416A5 from 4, complete sequence
          Length = 172472

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   gcagaggttctcaaacccca 306
             ||||||||||||||||||||
Sbjct: 50649 gcagaggttctcaaacccca 50668
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>gb|AC012309.8| Homo sapiens chromosome 19 clone CTC-454I21, complete sequence
          Length = 170020

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 166  acatggctaaacatttgaaa 185
            ||||||||||||||||||||
Sbjct: 7376 acatggctaaacatttgaaa 7357
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>gb|AC010632.7| Homo sapiens chromosome 19 clone CTD-2293H3, complete sequence
          Length = 111221

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   acatggctaaacatttgaaa 185
             ||||||||||||||||||||
Sbjct: 88410 acatggctaaacatttgaaa 88391
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>gb|AC146058.2| Pan troglodytes BAC clone RP43-92A10 from chromosome 7, complete sequence
          Length = 165469

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    gcagaggttctcaaacccca 306
              ||||||||||||||||||||
Sbjct: 109442 gcagaggttctcaaacccca 109461
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>gb|AC005079.6|AC005079 Homo sapiens BAC clone CTA-252P22 from 7, complete sequence
          Length = 415268

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    gcagaggttctcaaacccca 306
              ||||||||||||||||||||
Sbjct: 392140 gcagaggttctcaaacccca 392159
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>emb|BX855621.15| Zebrafish DNA sequence from clone CH211-225C13, complete sequence
          Length = 178447

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 380    gatcatgaaagccagtatga 399
              ||||||||||||||||||||
Sbjct: 152303 gatcatgaaagccagtatga 152322
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 45      ttgactttaaactgaaaatt 64
               ||||||||||||||||||||
Sbjct: 8671524 ttgactttaaactgaaaatt 8671543
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>gb|AC093722.2| Homo sapiens BAC clone CTD-2012I17 from 4, complete sequence
          Length = 163353

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   gcagaggttctcaaacccca 306
             ||||||||||||||||||||
Sbjct: 64428 gcagaggttctcaaacccca 64409
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>gb|AC147975.3| Pan troglodytes BAC clone CH251-510J15 from chromosome 7, complete
              sequence
          Length = 258316

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    gcagaggttctcaaacccca 306
              ||||||||||||||||||||
Sbjct: 134620 gcagaggttctcaaacccca 134601
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>dbj|AP002525.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0462H08
          Length = 139152

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     ttgactttaaactgaaaatt 64
              ||||||||||||||||||||
Sbjct: 103719 ttgactttaaactgaaaatt 103738
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>emb|BX648512.1|HSM808660 Homo sapiens mRNA; cDNA DKFZp686K1372 (from clone DKFZp686K1372)
          Length = 3116

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 328 tgtgaatcatgttcgagata 347
           ||||||||||||||||||||
Sbjct: 265 tgtgaatcatgttcgagata 284
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>gb|AY956763.1| Homo sapiens heat shock protein 90Bb (HSP90Bb) mRNA, complete cds
          Length = 1269

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 283  acttgcagaggttctcaaac 302
            ||||||||||||||||||||
Sbjct: 1138 acttgcagaggttctcaaac 1119
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>gb|AC006226.4|AC006226 Homo sapiens chromosome 4 clone C0011C13 map 4p16, complete sequence
          Length = 162349

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   acttgcagaggttctcaaac 302
             ||||||||||||||||||||
Sbjct: 97389 acttgcagaggttctcaaac 97370
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>ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) on chromosome 14
          Length = 1279711

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    gcagaggttctcaaacccca 306
              ||||||||||||||||||||
Sbjct: 204193 gcagaggttctcaaacccca 204212
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>dbj|AP000868.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-688B18, complete
             sequence
          Length = 181589

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    actgaaaattcagaaatcag 74
             ||||||||||||||||||||
Sbjct: 33485 actgaaaattcagaaatcag 33504
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>ref|NM_001037171.1| Homo sapiens acyl-CoA thioesterase 9 (ACOT9), transcript variant 1,
           mRNA
          Length = 1727

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 328 tgtgaatcatgttcgagata 347
           ||||||||||||||||||||
Sbjct: 281 tgtgaatcatgttcgagata 300
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>dbj|AB019438.1| Homo sapiens DNA for immunoglobulin heavy-chain variable region,
            complete sequence, 2 of 5
          Length = 200000

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 287  gcagaggttctcaaacccca 306
            ||||||||||||||||||||
Sbjct: 4193 gcagaggttctcaaacccca 4212


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,652,931
Number of Sequences: 3902068
Number of extensions: 3652931
Number of successful extensions: 66723
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66564
Number of HSP's gapped (non-prelim): 157
length of query: 439
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 417
effective length of database: 17,147,199,772
effective search space: 7150382304924
effective search space used: 7150382304924
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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