ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags26n07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466019.1| Oryza sativa (japonica cultivar-group), mRNA 222 9e-55
2gb|AY320036.1| Oryza sativa (japonica cultivar-group) RNA bindin... 222 9e-55
3dbj|AK065061.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 9e-55
4dbj|AK063159.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 9e-55
5gb|BT016256.1| Zea mays clone Contig89 mRNA sequence 214 2e-52
6gb|BT009474.1| Triticum aestivum clone wr1.pk0030.f12:fis, full ... 184 2e-43
7gb|AY320037.1| Oryza sativa (japonica cultivar-group) RNA bindin... 147 4e-32
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
9dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
10dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
11gb|AY112472.1| Zea mays CL152_1 mRNA sequence 143 7e-31
12dbj|AB078603.1| Pisum sativum SN4TDR mRNA for 110 kDa 4SNc-Tudor... 46 0.12
13dbj|AB055904.1| Pisum sativum SN4TDR mRNA for 110 kDa 4SNc-Tudor... 46 0.12
14gb|AC092827.8| Homo sapiens 12p BAC RP11-186N14 (Roswell Park Ca... 44 0.46
15emb|AL772362.8| Zebrafish DNA sequence from clone CH211-173K16 i... 44 0.46
16gb|DQ497803.1| Taeniatherum caput-medusae subsp. caput-medusae p... 42 1.8
17gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, com... 42 1.8
18gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, com... 42 1.8
19emb|AL445430.15| Human DNA sequence from clone RP11-716O23 on ch... 42 1.8
20gb|AC144777.3| Mus musculus BAC clone RP23-370N15 from chromosom... 42 1.8
21gb|AY753321.1| Uncultured bacterium clone OTU11 16S ribosomal RN... 42 1.8
22gb|AC127286.3| Mus musculus BAC clone RP23-340I4 from chromosome... 42 1.8
23gb|AF124350.1|AF124350 Streptococcus orisratti 16S ribosomal RNA... 42 1.8
24emb|BX629357.1|CNS09SBV Tetraodon nigroviridis BAC sequence 42 1.8
25gb|DQ319180.1| Leymus secalinus plastid acetyl-CoA carboxylase g... 42 1.8
26emb|BX005471.10| Mouse DNA sequence from clone RP23-18E5 on chro... 42 1.8
27emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chro... 42 1.8
28ref|NM_102108.2| Arabidopsis thaliana unknown protein AT1G22610 ... 40 7.3
29gb|BC061968.1| Rattus norvegicus ATPase, Na+/K+ transporting, al... 40 7.3
30gb|AC157797.5| Mus musculus chromosome 1, clone RP24-149G24, com... 40 7.3
31gb|AC141884.4| Mus musculus BAC clone RP24-129E6 from chromosome... 40 7.3
32gb|AC149483.1| Populus trichocarpa clone Pop1-69I13, complete se... 40 7.3
33gb|AC164553.2| Mus musculus BAC clone RP23-361L12 from chromosom... 40 7.3
34gb|AC124369.4| Mus musculus BAC clone RP24-549O12 from chromosom... 40 7.3
35gb|AC117215.3| Mus musculus BAC clone RP23-308M1 from 7, complet... 40 7.3
36gb|AY080693.1| Arabidopsis thaliana At1g22610 mRNA sequence 40 7.3
37emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in... 40 7.3
38emb|CR938710.1| Medicago truncatula chromosome 5 clone mth2-170k... 40 7.3
39emb|X53234.1|RNNKAA1B Rat NKAA1 gene for Na+/K+ -ATPase alpha1 s... 40 7.3
40gb|AC104455.2| Homo sapiens chromosome 1 clone RP4-682E18, compl... 40 7.3
41ref|NM_012504.1| Rattus norvegicus ATPase, Na+/K+ transporting, ... 40 7.3
42gb|AC079389.2| Rattus norvegicus strain Brown Norway chromosome ... 40 7.3
43gb|AC006551.6|AC006551 Arabidopsis thaliana chromosome I BAC F12... 40 7.3
44gb|AC111099.15| Mus musculus chromosome 1, clone RP23-177A20, co... 40 7.3
45gb|AF115319.1|AF115319 Mus musculus Ucp2 gene, promoter sequence 40 7.3
46emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in... 40 7.3
47emb|BX815537.1|CNS0AEKP Arabidopsis thaliana Full-length cDNA Co... 40 7.3
48gb|AC064837.6| Homo sapiens BAC clone RP11-693G13 from 2, comple... 40 7.3
49gb|AC017081.8| Homo sapiens BAC clone RP11-470J24 from 2, comple... 40 7.3
50gb|AC112484.8| Homo sapiens 3 BAC RP11-723O4 (Roswell Park Cance... 40 7.3
51gb|AC102777.12| Mus musculus chromosome 1, clone RP23-5K7, compl... 40 7.3
52emb|BX908726.21| Zebrafish DNA sequence from clone DKEY-74I2 in ... 40 7.3
53emb|X05882.1|RNATPAR Rat mRNA for sodium/potassium-transporting ... 40 7.3
54dbj|AP002428.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 7.3
55dbj|AP000923.5| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 7.3
56gb|AC174721.1| Gasterosteus aculeatus clone VMRC28-84C14, comple... 40 7.3
57gb|AC139317.4| Mus musculus BAC clone RP24-495N6 from 15, comple... 40 7.3
58gb|AC151839.2| Mus musculus BAC clone RP23-191M5 from 7, complet... 40 7.3
59gb|AC147742.13| Mus musculus chromosome 7, clone RP23-202M23, co... 40 7.3
60gb|AC170255.8| Mus musculus chromosome 1, clone RP23-359K18, com... 40 7.3
61gb|M28647.1|RATNALPH1 Rattus norvegicus Na,K-ATPase alpha-1 subu... 40 7.3
62gb|M14511.1|RATATPA1 Rat Na+,K+-ATPase alpha isoform catalytic s... 40 7.3 
>ref|XM_466019.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3549

 Score =  222 bits (112), Expect = 9e-55
 Identities = 211/244 (86%)
 Strand = Plus / Minus

                                                                        
Query: 271  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 330
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 3153 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 3094

                                                                        
Query: 331  ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 390
            ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 3093 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 3034

                                                                        
Query: 391  tgtcccagctcttgcccctttcaagtcgggcaagcccttcctcaagcatggcagcattga 450
            | ||||| |||||||  |||||||| || |||||||||||||||||||||| ||||||||
Sbjct: 3033 tatcccatctcttgcttctttcaagccgagcaagcccttcctcaagcatggtagcattga 2974

                                                                        
Query: 451  tgctggattctgtctctggatcaacaagagtcacaatgagaacaggtccagtgccttgac 510
            |||||| |||||||||||  ||||| || || ||||| |||| || |||||||||||| |
Sbjct: 2973 tgctggtttctgtctctgcgtcaaccagtgtaacaatcagaatagttccagtgccttgtc 2914

                
Query: 511  cctt 514
            ||||
Sbjct: 2913 cctt 2910



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 74   ttattgagcttaggggaaaaacaatgtat 102
            ||||| || ||||||||||||||||||||
Sbjct: 3443 ttattaagtttaggggaaaaacaatgtat 3415
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>gb|AY320036.1| Oryza sativa (japonica cultivar-group) RNA binding protein Rp120
            mRNA, complete cds
          Length = 2961

 Score =  222 bits (112), Expect = 9e-55
 Identities = 211/244 (86%)
 Strand = Plus / Minus

                                                                        
Query: 271  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 330
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 2932 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 2873

                                                                        
Query: 331  ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 390
            ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 2872 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 2813

                                                                        
Query: 391  tgtcccagctcttgcccctttcaagtcgggcaagcccttcctcaagcatggcagcattga 450
            | ||||| |||||||  |||||||| || |||||||||||||||||||||| ||||||||
Sbjct: 2812 tatcccatctcttgcttctttcaagccgagcaagcccttcctcaagcatggtagcattga 2753

                                                                        
Query: 451  tgctggattctgtctctggatcaacaagagtcacaatgagaacaggtccagtgccttgac 510
            |||||| |||||||||||  ||||| || || ||||| |||| || |||||||||||| |
Sbjct: 2752 tgctggtttctgtctctgcgtcaaccagtgtaacaatcagaatagttccagtgccttgtc 2693

                
Query: 511  cctt 514
            ||||
Sbjct: 2692 cctt 2689
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>dbj|AK065061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J15, full
            insert sequence
          Length = 3547

 Score =  222 bits (112), Expect = 9e-55
 Identities = 211/244 (86%)
 Strand = Plus / Minus

                                                                        
Query: 271  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 330
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 3151 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 3092

                                                                        
Query: 331  ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 390
            ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 3091 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 3032

                                                                        
Query: 391  tgtcccagctcttgcccctttcaagtcgggcaagcccttcctcaagcatggcagcattga 450
            | ||||| |||||||  |||||||| || |||||||||||||||||||||| ||||||||
Sbjct: 3031 tatcccatctcttgcttctttcaagccgagcaagcccttcctcaagcatggtagcattga 2972

                                                                        
Query: 451  tgctggattctgtctctggatcaacaagagtcacaatgagaacaggtccagtgccttgac 510
            |||||| |||||||||||  ||||| || || ||||| |||| || |||||||||||| |
Sbjct: 2971 tgctggtttctgtctctgcgtcaaccagtgtaacaatcagaatagttccagtgccttgtc 2912

                
Query: 511  cctt 514
            ||||
Sbjct: 2911 cctt 2908



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 74   ttattgagcttaggggaaaaacaatgtat 102
            ||||| || ||||||||||||||||||||
Sbjct: 3441 ttattaagtttaggggaaaaacaatgtat 3413
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>dbj|AK063159.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D08, full
            insert sequence
          Length = 1551

 Score =  222 bits (112), Expect = 9e-55
 Identities = 211/244 (86%)
 Strand = Plus / Minus

                                                                        
Query: 271  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 330
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 1169 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 1110

                                                                        
Query: 331  ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 390
            ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 1109 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 1050

                                                                        
Query: 391  tgtcccagctcttgcccctttcaagtcgggcaagcccttcctcaagcatggcagcattga 450
            | ||||| |||||||  |||||||| || |||||||||||||||||||||| ||||||||
Sbjct: 1049 tatcccatctcttgcttctttcaagccgagcaagcccttcctcaagcatggtagcattga 990

                                                                        
Query: 451  tgctggattctgtctctggatcaacaagagtcacaatgagaacaggtccagtgccttgac 510
            |||||| |||||||||||  ||||| || || ||||| |||| || |||||||||||| |
Sbjct: 989  tgctggtttctgtctctgcgtcaaccagtgtaacaatcagaatagttccagtgccttgtc 930

                
Query: 511  cctt 514
            ||||
Sbjct: 929  cctt 926



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 74   ttattgagcttaggggaaaaacaatgtat 102
            ||||| || ||||||||||||||||||||
Sbjct: 1459 ttattaagtttaggggaaaaacaatgtat 1431
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>gb|BT016256.1| Zea mays clone Contig89 mRNA sequence
          Length = 1657

 Score =  214 bits (108), Expect = 2e-52
 Identities = 189/216 (87%)
 Strand = Plus / Minus

                                                                        
Query: 279  tgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagcctttccttcttc 338
            ||||| |||||||| |||||||| ||||| |||||||| |  ||||||||||||||||| 
Sbjct: 1350 tgctcgtcctcgtccgattcaacatctccgtactgccaaatccgcagcctttccttcttt 1291

                                                                        
Query: 339  gccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttgtgtcccag 398
            ||||| |||||||||||||||||||||| |||||| |||||||||||| | |||||||| 
Sbjct: 1290 gccttgtcctggaactgttccaggttctggagagccgtcttcctctccctagtgtcccat 1231

                                                                        
Query: 399  ctcttgcccctttcaagtcgggcaagcccttcctcaagcatggcagcattgatgctggat 458
            |||||||  ||||| || ||||||||||||||||||||||||| ||| || |||||   |
Sbjct: 1230 ctcttgcttctttcgagccgggcaagcccttcctcaagcatggtagcgtttatgctactt 1171

                                                
Query: 459  tctgtctctggatcaacaagagtcacaatgagaaca 494
            |||||||| | |||||||||||| ||||||||||||
Sbjct: 1170 tctgtctccgcatcaacaagagtaacaatgagaaca 1135
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>gb|BT009474.1| Triticum aestivum clone wr1.pk0030.f12:fis, full insert mRNA sequence
          Length = 1394

 Score =  184 bits (93), Expect = 2e-43
 Identities = 99/101 (98%)
 Strand = Plus / Minus

                                                                        
Query: 435  agcatggcagcattgatgctggattctgtctctggatcaacaagagtcacaatgagaaca 494
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1389 agcatggcagcattgatgctggattctgtctctggatcaacaagagtcacaatgagaaca 1330

                                                     
Query: 495  ggtccagtgccttgacccttcacttttccaccggtagtgtc 535
            |||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 1329 ggtccagtgccttgtcccttcacttttccaccagtagtgtc 1289
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>gb|AY320037.1| Oryza sativa (japonica cultivar-group) RNA binding protein Rp120
            gene, complete cds
          Length = 5478

 Score =  147 bits (74), Expect = 4e-32
 Identities = 140/162 (86%)
 Strand = Plus / Minus

                                                                        
Query: 271  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 330
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 5271 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 5212

                                                                        
Query: 331  ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 390
            ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 5211 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 5152

                                                      
Query: 391  tgtcccagctcttgcccctttcaagtcgggcaagcccttcct 432
            | ||||| |||||||  |||||||| || |||||||||||||
Sbjct: 5151 tatcccatctcttgcttctttcaagccgagcaagcccttcct 5110



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                        
Query: 430  cctcaagcatggcagcattgatgctggattctgtctctggatcaacaagagtcacaatga 489
            |||||||||||| |||||||||||||| |||||||||||  ||||| || || ||||| |
Sbjct: 4915 cctcaagcatggtagcattgatgctggtttctgtctctgcgtcaaccagtgtaacaatca 4856

                                     
Query: 490  gaacaggtccagtgccttgaccctt 514
            ||| || |||||||||||| |||||
Sbjct: 4855 gaatagttccagtgccttgtccctt 4831
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  147 bits (74), Expect = 4e-32
 Identities = 140/162 (86%)
 Strand = Plus / Plus

                                                                            
Query: 271      ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 330
                |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 19118661 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 19118720

                                                                            
Query: 331      ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 390
                ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 19118721 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 19118780

                                                          
Query: 391      tgtcccagctcttgcccctttcaagtcgggcaagcccttcct 432
                | ||||| |||||||  |||||||| || |||||||||||||
Sbjct: 19118781 tatcccatctcttgcttctttcaagccgagcaagcccttcct 19118822



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Plus

                                                                            
Query: 430      cctcaagcatggcagcattgatgctggattctgtctctggatcaacaagagtcacaatga 489
                |||||||||||| |||||||||||||| |||||||||||  ||||| || || ||||| |
Sbjct: 19119017 cctcaagcatggtagcattgatgctggtttctgtctctgcgtcaaccagtgtaacaatca 19119076

                                         
Query: 490      gaacaggtccagtgccttgaccctt 514
                ||| || |||||||||||| |||||
Sbjct: 19119077 gaatagttccagtgccttgtccctt 19119101



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 74       ttattgagcttaggggaaaaacaatgtat 102
                ||||| || ||||||||||||||||||||
Sbjct: 19118371 ttattaagtttaggggaaaaacaatgtat 19118399
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>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0415B12
          Length = 157419

 Score =  147 bits (74), Expect = 4e-32
 Identities = 140/162 (86%)
 Strand = Plus / Plus

                                                                         
Query: 271   ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 330
             |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 16910 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 16969

                                                                         
Query: 331   ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 390
             ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 16970 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 17029

                                                       
Query: 391   tgtcccagctcttgcccctttcaagtcgggcaagcccttcct 432
             | ||||| |||||||  |||||||| || |||||||||||||
Sbjct: 17030 tatcccatctcttgcttctttcaagccgagcaagcccttcct 17071



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Plus

                                                                         
Query: 430   cctcaagcatggcagcattgatgctggattctgtctctggatcaacaagagtcacaatga 489
             |||||||||||| |||||||||||||| |||||||||||  ||||| || || ||||| |
Sbjct: 17266 cctcaagcatggtagcattgatgctggtttctgtctctgcgtcaaccagtgtaacaatca 17325

                                      
Query: 490   gaacaggtccagtgccttgaccctt 514
             ||| || |||||||||||| |||||
Sbjct: 17326 gaatagttccagtgccttgtccctt 17350



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 74    ttattgagcttaggggaaaaacaatgtat 102
             ||||| || ||||||||||||||||||||
Sbjct: 16620 ttattaagtttaggggaaaaacaatgtat 16648
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>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0047A17
          Length = 149142

 Score =  147 bits (74), Expect = 4e-32
 Identities = 140/162 (86%)
 Strand = Plus / Plus

                                                                          
Query: 271    ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 330
              |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 124182 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 124241

                                                                          
Query: 331    ccttcttcgccttctcctggaactgttccaggttctcgagagctgtcttcctctcctttg 390
              ||||||| || |||||||||||||||||||| |||| |||||| | ||| |||||| | |
Sbjct: 124242 ccttctttgctttctcctggaactgttccagattctggagagcagcctttctctccctag 124301

                                                        
Query: 391    tgtcccagctcttgcccctttcaagtcgggcaagcccttcct 432
              | ||||| |||||||  |||||||| || |||||||||||||
Sbjct: 124302 tatcccatctcttgcttctttcaagccgagcaagcccttcct 124343



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Plus

                                                                          
Query: 430    cctcaagcatggcagcattgatgctggattctgtctctggatcaacaagagtcacaatga 489
              |||||||||||| |||||||||||||| |||||||||||  ||||| || || ||||| |
Sbjct: 124538 cctcaagcatggtagcattgatgctggtttctgtctctgcgtcaaccagtgtaacaatca 124597

                                       
Query: 490    gaacaggtccagtgccttgaccctt 514
              ||| || |||||||||||| |||||
Sbjct: 124598 gaatagttccagtgccttgtccctt 124622



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 74     ttattgagcttaggggaaaaacaatgtat 102
              ||||| || ||||||||||||||||||||
Sbjct: 123892 ttattaagtttaggggaaaaacaatgtat 123920
to top
>gb|AY112472.1| Zea mays CL152_1 mRNA sequence
          Length = 1436

 Score =  143 bits (72), Expect = 7e-31
 Identities = 126/144 (87%)
 Strand = Plus / Minus

                                                                       
Query: 351 aactgttccaggttctcgagagctgtcttcctctcctttgtgtcccagctcttgcccctt 410
           |||||||||||||||| |||||| |||||||||||| | |||||||| |||||||  |||
Sbjct: 976 aactgttccaggttctggagagccgtcttcctctccctagtgtcccatctcttgcttctt 917

                                                                       
Query: 411 tcaagtcgggcaagcccttcctcaagcatggcagcattgatgctggattctgtctctgga 470
           || || ||||||||||||||||||||||||| ||| || |||||   ||||||||| | |
Sbjct: 916 tcgagccgggcaagcccttcctcaagcatggtagcgtttatgctactttctgtctccgca 857

                                   
Query: 471 tcaacaagagtcacaatgagaaca 494
           ||||||||||| ||||||||||||
Sbjct: 856 tcaacaagagtaacaatgagaaca 833
to top
>dbj|AB078603.1| Pisum sativum SN4TDR mRNA for 110 kDa 4SNc-Tudor domain protein,
            complete cds
          Length = 3379

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 420  gcaagcccttcctcaagcatggcagcattga 450
            ||||| ||||||| |||||||||||||||||
Sbjct: 2986 gcaagtccttcctgaagcatggcagcattga 2956



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 495  ggtccagtgccttgacccttcacttttccaccggtagtgtc 535
            |||||||| || || || ||||||||||| |||||||||||
Sbjct: 2911 ggtccagttccctgccctttcacttttcctccggtagtgtc 2871
to top
>dbj|AB055904.1| Pisum sativum SN4TDR mRNA for 110 kDa 4SNc-Tudor domain protein,
            partial cds
          Length = 2343

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 420  gcaagcccttcctcaagcatggcagcattga 450
            ||||| ||||||| |||||||||||||||||
Sbjct: 1922 gcaagtccttcctgaagcatggcagcattga 1892



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 495  ggtccagtgccttgacccttcacttttccaccggtagtgtc 535
            |||||||| || || || ||||||||||| |||||||||||
Sbjct: 1847 ggtccagttccctgccctttcacttttcctccggtagtgtc 1807
to top
>gb|AC092827.8| Homo sapiens 12p BAC RP11-186N14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 117636

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 91    aaaacaatgtatatagttctct 112
             ||||||||||||||||||||||
Sbjct: 97578 aaaacaatgtatatagttctct 97599
to top
>emb|AL772362.8| Zebrafish DNA sequence from clone CH211-173K16 in linkage group 13,
              complete sequence
          Length = 165993

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 155    ttcatataagctctcgactgagtttc 180
              |||||||| |||||||||||||||||
Sbjct: 151331 ttcatatatgctctcgactgagtttc 151306
to top
>gb|DQ497803.1| Taeniatherum caput-medusae subsp. caput-medusae plastid acetyl-CoA
           carboxylase gene, partial cds; nuclear gene for plastid
           product
          Length = 1437

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 511 ccttcacttttccaccggtag 531
           |||||||||||||||||||||
Sbjct: 981 ccttcacttttccaccggtag 961
to top
>gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, complete sequence
          Length = 275646

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 74     ttattgagcttaggggaaaaa 94
              |||||||||||||||||||||
Sbjct: 246866 ttattgagcttaggggaaaaa 246886
to top
>gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, complete sequence
          Length = 257203

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 74    ttattgagcttaggggaaaaa 94
             |||||||||||||||||||||
Sbjct: 88447 ttattgagcttaggggaaaaa 88467
to top
>emb|AL445430.15| Human DNA sequence from clone RP11-716O23 on chromosome 6 Contains one or
              two novel genes, a repressor of protein-kinase
              (interferon-inducible double stranded RNA dependent
              inhibitor) (P58 repressor) (PRKRIR) pseudogene and a CpG
              island, complete sequence
          Length = 127862

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 453    ctggattctgtctctggatca 473
              |||||||||||||||||||||
Sbjct: 103799 ctggattctgtctctggatca 103819
to top
>gb|AC144777.3| Mus musculus BAC clone RP23-370N15 from chromosome unknown, complete
             sequence
          Length = 201349

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 461   tgtctctggatcaacaagagtcaca 485
             |||||||||||||| ||||||||||
Sbjct: 27654 tgtctctggatcaaaaagagtcaca 27630
to top
>gb|AY753321.1| Uncultured bacterium clone OTU11 16S ribosomal RNA gene, partial
           sequence
          Length = 1433

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 397 agctcttgcccctttcaagtc 417
           |||||||||||||||||||||
Sbjct: 183 agctcttgcccctttcaagtc 163
to top
>gb|AC127286.3| Mus musculus BAC clone RP23-340I4 from chromosome unknown, complete
             sequence
          Length = 190953

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 461   tgtctctggatcaacaagagtcaca 485
             |||||||||||||| ||||||||||
Sbjct: 13965 tgtctctggatcaaaaagagtcaca 13989
to top
>gb|AF124350.1|AF124350 Streptococcus orisratti 16S ribosomal RNA gene, partial sequence
          Length = 1337

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 397 agctcttgcccctttcaagtc 417
           |||||||||||||||||||||
Sbjct: 192 agctcttgcccctttcaagtc 172
to top
>emb|BX629357.1|CNS09SBV Tetraodon nigroviridis BAC sequence
          Length = 168910

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 142    ttcttactaagttttcatata 162
              |||||||||||||||||||||
Sbjct: 141218 ttcttactaagttttcatata 141198
to top
>gb|DQ319180.1| Leymus secalinus plastid acetyl-CoA carboxylase gene, partial cds;
           nuclear gene for plastid product
          Length = 1445

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 511 ccttcacttttccaccggtag 531
           |||||||||||||||||||||
Sbjct: 981 ccttcacttttccaccggtag 961
to top
>emb|BX005471.10| Mouse DNA sequence from clone RP23-18E5 on chromosome X, complete
             sequence
          Length = 141331

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 461   tgtctctggatcaacaagagtcaca 485
             |||||||||||||| ||||||||||
Sbjct: 51152 tgtctctggatcaaaaagagtcaca 51128
to top
>emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chromosome X, complete
              sequence
          Length = 195413

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 54     gtccacaaaggacacagacct 74
              |||||||||||||||||||||
Sbjct: 152418 gtccacaaaggacacagacct 152438
to top
>ref|NM_102108.2| Arabidopsis thaliana unknown protein AT1G22610 mRNA, complete cds
          Length = 3295

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 282 tcttcctcgtcggattcaacgtctccat 309
           ||||| ||||||| ||||||||||||||
Sbjct: 755 tcttcttcgtcggcttcaacgtctccat 728
to top
>gb|BC061968.1| Rattus norvegicus ATPase, Na+/K+ transporting, alpha 1 polypeptide,
           mRNA (cDNA clone MGC:72546 IMAGE:5598014), complete cds
          Length = 3700

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 326 cctttccttcttcgccttct 345
           ||||||||||||||||||||
Sbjct: 338 cctttccttcttcgccttct 319
to top
>gb|AC157797.5| Mus musculus chromosome 1, clone RP24-149G24, complete sequence
          Length = 157629

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   cagcattgatgctggattct 461
             ||||||||||||||||||||
Sbjct: 92820 cagcattgatgctggattct 92801
to top
>gb|AC141884.4| Mus musculus BAC clone RP24-129E6 from chromosome 14, complete sequence
          Length = 174973

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 376    tcttcctctcctttgtgtcccagc 399
              |||||||||||||||| |||||||
Sbjct: 145357 tcttcctctcctttgtttcccagc 145334
to top
>gb|AC149483.1| Populus trichocarpa clone Pop1-69I13, complete sequence
          Length = 51685

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 89    gaaaaacaatgtatatagttctct 112
             |||||||||| |||||||||||||
Sbjct: 28326 gaaaaacaatatatatagttctct 28303
to top
>gb|AC164553.2| Mus musculus BAC clone RP23-361L12 from chromosome 14, complete
             sequence
          Length = 217754

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 376   tcttcctctcctttgtgtcccagc 399
             |||||||||||||||| |||||||
Sbjct: 87910 tcttcctctcctttgtttcccagc 87887
to top
>gb|AC124369.4| Mus musculus BAC clone RP24-549O12 from chromosome 7, complete sequence
          Length = 147686

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   ctcctttgtgtcccagctct 402
             ||||||||||||||||||||
Sbjct: 40364 ctcctttgtgtcccagctct 40345
to top
>gb|AC117215.3| Mus musculus BAC clone RP23-308M1 from 7, complete sequence
          Length = 192092

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 101   atatagttctcttcttctaatggc 124
             |||| |||||||||||||||||||
Sbjct: 99542 atatggttctcttcttctaatggc 99565
to top
>gb|AY080693.1| Arabidopsis thaliana At1g22610 mRNA sequence
          Length = 1920

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 282 tcttcctcgtcggattcaacgtctccat 309
           ||||| ||||||| ||||||||||||||
Sbjct: 746 tcttcttcgtcggcttcaacgtctccat 719
to top
>emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in linkage group 5, complete
              sequence
          Length = 185915

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    ataaatatagtctctctttc 144
              ||||||||||||||||||||
Sbjct: 181778 ataaatatagtctctctttc 181797
to top
>emb|CR938710.1| Medicago truncatula chromosome 5 clone mth2-170k9, COMPLETE SEQUENCE
          Length = 123977

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 335   cttcgccttctcctggaactgttccaggttct 366
             |||| |||||||||||||||  ||||||||||
Sbjct: 51074 cttcaccttctcctggaactcctccaggttct 51105
to top
>emb|X53234.1|RNNKAA1B Rat NKAA1 gene for Na+/K+ -ATPase alpha1 subunit exon 2
          Length = 1813

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 326  cctttccttcttcgccttct 345
            ||||||||||||||||||||
Sbjct: 1771 cctttccttcttcgccttct 1752
to top
>gb|AC104455.2| Homo sapiens chromosome 1 clone RP4-682E18, complete sequence
          Length = 125123

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    tgtatatagttctcttcttc 117
             ||||||||||||||||||||
Sbjct: 87138 tgtatatagttctcttcttc 87157
to top
>ref|NM_012504.1| Rattus norvegicus ATPase, Na+/K+ transporting, alpha 1 polypeptide
           (Atp1a1), mRNA
          Length = 3636

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 326 cctttccttcttcgccttct 345
           ||||||||||||||||||||
Sbjct: 327 cctttccttcttcgccttct 308
to top
>gb|AC079389.2| Rattus norvegicus strain Brown Norway chromosome 6 clone RP31-263K14,
             complete sequence
          Length = 151836

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    aaaacaatgtatatagttct 110
             ||||||||||||||||||||
Sbjct: 34730 aaaacaatgtatatagttct 34711
to top
>gb|AC006551.6|AC006551 Arabidopsis thaliana chromosome I BAC F12K8 genomic sequence, complete
             sequence
          Length = 107200

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 282   tcttcctcgtcggattcaacgtctccat 309
             ||||| ||||||| ||||||||||||||
Sbjct: 12990 tcttcttcgtcggcttcaacgtctccat 13017
to top
>gb|AC111099.15| Mus musculus chromosome 1, clone RP23-177A20, complete sequence
          Length = 195979

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 451   tgctggattctgtctctgga 470
             ||||||||||||||||||||
Sbjct: 69007 tgctggattctgtctctgga 69026
to top
>gb|AF115319.1|AF115319 Mus musculus Ucp2 gene, promoter sequence
          Length = 7342

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 101  atatagttctcttcttctaatggc 124
            |||| |||||||||||||||||||
Sbjct: 3933 atatggttctcttcttctaatggc 3910
to top
>emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in linkage group 5,
             complete sequence
          Length = 160041

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   ataaatatagtctctctttc 144
             ||||||||||||||||||||
Sbjct: 88307 ataaatatagtctctctttc 88326
to top
>emb|BX815537.1|CNS0AEKP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS70ZB10 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2808

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 282 tcttcctcgtcggattcaacgtctccat 309
           ||||| ||||||| ||||||||||||||
Sbjct: 687 tcttcttcgtcggcttcaacgtctccat 660
to top
>gb|AC064837.6| Homo sapiens BAC clone RP11-693G13 from 2, complete sequence
          Length = 111857

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   tcttctaatggcataaatat 132
             ||||||||||||||||||||
Sbjct: 84384 tcttctaatggcataaatat 84403
to top
>gb|AC017081.8| Homo sapiens BAC clone RP11-470J24 from 2, complete sequence
          Length = 149462

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   ccaaaactttcatatctaaa 209
             ||||||||||||||||||||
Sbjct: 29599 ccaaaactttcatatctaaa 29580
to top
>gb|AC112484.8| Homo sapiens 3 BAC RP11-723O4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 185470

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   gtgtccaaaactttcatatc 205
             ||||||||||||||||||||
Sbjct: 41312 gtgtccaaaactttcatatc 41293
to top
>gb|AC102777.12| Mus musculus chromosome 1, clone RP23-5K7, complete sequence
          Length = 195874

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 442    cagcattgatgctggattct 461
              ||||||||||||||||||||
Sbjct: 137517 cagcattgatgctggattct 137536
to top
>emb|BX908726.21| Zebrafish DNA sequence from clone DKEY-74I2 in linkage group 22,
             complete sequence
          Length = 180599

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 370   gagctgtcttcctctccttt 389
             ||||||||||||||||||||
Sbjct: 92306 gagctgtcttcctctccttt 92287
to top
>emb|X05882.1|RNATPAR Rat mRNA for sodium/potassium-transporting ATPase alpha-1 chain
           precursor (atp1a1 gene)
          Length = 3407

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 326 cctttccttcttcgccttct 345
           ||||||||||||||||||||
Sbjct: 104 cctttccttcttcgccttct 85
to top
>dbj|AP002428.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-99C10, complete
              sequences
          Length = 175110

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    aaactttcatatctaaacca 212
              ||||||||||||||||||||
Sbjct: 139050 aaactttcatatctaaacca 139031
to top
>dbj|AP000923.5| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-752D5, complete
             sequences
          Length = 170973

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   aaactttcatatctaaacca 212
             ||||||||||||||||||||
Sbjct: 31136 aaactttcatatctaaacca 31117
to top
>gb|AC174721.1| Gasterosteus aculeatus clone VMRC28-84C14, complete sequence
          Length = 125967

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 376   tcttcctctcctttgtgtcccagc 399
             |||||||| |||||||||||||||
Sbjct: 57995 tcttcctcccctttgtgtcccagc 57972
to top
>gb|AC139317.4| Mus musculus BAC clone RP24-495N6 from 15, complete sequence
          Length = 182415

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 328   tttccttcttcgccttctcc 347
             ||||||||||||||||||||
Sbjct: 98222 tttccttcttcgccttctcc 98203
to top
>gb|AC151839.2| Mus musculus BAC clone RP23-191M5 from 7, complete sequence
          Length = 232568

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 101   atatagttctcttcttctaatggc 124
             |||| |||||||||||||||||||
Sbjct: 42584 atatggttctcttcttctaatggc 42607
to top
>gb|AC147742.13| Mus musculus chromosome 7, clone RP23-202M23, complete sequence
          Length = 194167

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 101   atatagttctcttcttctaatggc 124
             |||| |||||||||||||||||||
Sbjct: 78320 atatggttctcttcttctaatggc 78343
to top
>gb|AC170255.8| Mus musculus chromosome 1, clone RP23-359K18, complete sequence
          Length = 226189

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 442    cagcattgatgctggattct 461
              ||||||||||||||||||||
Sbjct: 148645 cagcattgatgctggattct 148626
to top
>gb|M28647.1|RATNALPH1 Rattus norvegicus Na,K-ATPase alpha-1 subunit mRNA, complete cds
          Length = 3599

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 326 cctttccttcttcgccttct 345
           ||||||||||||||||||||
Sbjct: 350 cctttccttcttcgccttct 331
to top
>gb|M14511.1|RATATPA1 Rat Na+,K+-ATPase alpha isoform catalytic subunit mRNA, complete
           cds
          Length = 3636

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 326 cctttccttcttcgccttct 345
           ||||||||||||||||||||
Sbjct: 327 cctttccttcttcgccttct 308


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,432,053
Number of Sequences: 3902068
Number of extensions: 5432053
Number of successful extensions: 103457
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103281
Number of HSP's gapped (non-prelim): 176
length of query: 536
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 513
effective length of database: 17,143,297,704
effective search space: 8794511722152
effective search space used: 8794511722152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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