>SUB2_ASHGO (Q759L6) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)|
          Length = 438

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 21/90 (23%), Positives = 44/90 (48%)
 Frame = -3

Query: 620 NDKELVELSSRLIGESLPTTDQLACIQALRDHWRSSPSSSIQLQEIGPLLRDYQRLIIRR 441
           N+ +L  + + +I E     ++L   + ++D +R++P    Q+      L    R I RR
Sbjct: 194 NNIDLSHVKNFVIDECDKVLEELDMRRDVQDIFRATPRDK-QVMMFSATLSQEIRPICRR 252

Query: 440 FVENPSPTFLEREDRRLFHLKNASQLRMDD 351
           F++NP   F++ E +   H      +R+++
Sbjct: 253 FLQNPLEIFVDDEAKLTLHGLQQYYIRLEE 282

>MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor|
           (Mu-protocadherin)
          Length = 845

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 21/63 (33%), Positives = 26/63 (41%)
 Frame = -2

Query: 564 HRPACMYSGTS*SLEKFSIQLNTAPGDRPSAEGLSTSHYPPLRGKPIPDIP*KGRSSPLP 385
           H+PA    GT+ + E  + Q        P   G STSH P   G      P  G S P+P
Sbjct: 592 HQPATPGGGTAQTPEAGTSQ------PMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQPMP 645

Query: 384 FEK 376
             K
Sbjct: 646 LSK 648



 Score = 30.4 bits (67), Expect = 5.3
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = -2

Query: 501 NTAPGDRPSAEGLSTSHYPPLRGKPIPDIP*KGRSSPLP 385
           ++ PG  P AE  STSH P   G      P  G S P+P
Sbjct: 515 SSTPGGSPGAEN-STSHQPATPGGDTAQTPKPGTSQPMP 552

>YBL7_YEAST (P38213) Protein YBR007C|
          Length = 736

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
 Frame = -3

Query: 611 ELVELSSRLIGE-SLPTTDQLACIQALRDHWRSSPSSSIQLQEIGPLL----RDYQRLII 447
           E ++ + RL+ +  L   D+L   +AL +   +S +S +  Q  GP L     ++  L  
Sbjct: 59  ESIQTTERLLDKLDLSLEDELILQEALLEEENASRNSQLS-QTSGPTLCMPASEFPSL-- 115

Query: 446 RRFVENPSPTFLEREDRRL 390
            R+  NPSPT+++  DR L
Sbjct: 116 -RYRTNPSPTYIQARDRSL 133

>YO075_YEAST (Q08234) Probable ATP-dependent transporter YOL075C/YOL074C|
          Length = 1294

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 28/119 (23%), Positives = 46/119 (38%)
 Frame = -3

Query: 665 IPLSVEPSASFVDEMNDKELVELSSRLIGESLPTTDQLACIQALRDHWRSSPSSSIQLQE 486
           +P  V P+  F+D      L  + SR   E   T  +L    +L DHW     + +QLQ 
Sbjct: 285 VPQLVNPADYFID------LSSVDSRSDKEEAATQSRL---NSLIDHWHDYERTHLQLQ- 334

Query: 485 IGPLLRDYQRLIIRRFVENPSPTFLEREDRRLFHLKNASQLRMDDIPILLGEYRTLLST 309
                          ++ N +   ++    RL   K  + L   +  +   +Y TL+ST
Sbjct: 335 ------------AESYISNATEIQIQNMTTRLPFWKQVTVLTRRNFKLNFSDYVTLIST 381

>VIT6_OSCBR (Q94637) Vitellogenin 6 precursor|
          Length = 1660

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
 Frame = +2

Query: 482 LSPGAVLSWMENFSNDHEVPEYMQA-------GRW*EVIHQ*A*MIIPPILYRSFRQQNL 640
           +  GA L+W   FSND  +P+ + A       G W + + Q         LY++     L
Sbjct: 681 MQSGATLNWATIFSNDSVLPKEITASLETVFGGEWNKYLAQIG-------LYQNNLDSVL 733

Query: 641 LKVLQKVE 664
            K+LQKVE
Sbjct: 734 SKLLQKVE 741

>MI43_MYCIT (Q03490) 27 kDa lipoprotein antigen precursor (Mi43 antigen)|
          Length = 262

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 13/38 (34%), Positives = 27/38 (71%)
 Frame = +1

Query: 559 SVVGSDSPMSLDDNSTNSLSFISSTKLAEGSTESGIPN 672
           SV G+   ++ +DN+T +++F S+TK+ E +  +G+P+
Sbjct: 70  SVAGNSIQVTKEDNATAAVNFTSATKITE-AVPAGLPD 106

>VG09_ICHV1 (Q00163) Hypothetical gene 9 zinc-binding protein|
          Length = 158

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +2

Query: 173 GPRWLGRRPSRP-AHRKPQKQR 235
           GPRW G RP+RP AH   Q+ R
Sbjct: 126 GPRWRGPRPTRPEAHEAVQRSR 147


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,707,171
Number of Sequences: 219361
Number of extensions: 2508309
Number of successful extensions: 5944
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5944
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6856295237
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)