ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags27b23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY677177.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (... 1100 0.0
2emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-gluc... 430 e-117
3gb|AY104952.1| Zea mays PCO092342 mRNA sequence 381 e-102
4dbj|AB079064.1| Oryza sativa (japonica cultivar-group) UXS-3 mRN... 353 4e-94
5dbj|AK100908.1| Oryza sativa (japonica cultivar-group) cDNA clon... 353 4e-94
6dbj|AK060031.1| Oryza sativa (japonica cultivar-group) cDNA clon... 353 4e-94
7gb|BT019083.1| Zea mays clone Contig672.F mRNA sequence 343 4e-91
8dbj|AK061632.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 3e-42
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 165 2e-37
10gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare str... 165 2e-37
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
12gb|U82433.1|PAU82433 Prunus armeniaca thymidine diphospho-glucos... 74 5e-10
13gb|AY922315.1| Populus tomentosa UDP-glucuronic acid decarboxyla... 62 2e-06
14gb|AY619950.1| Nicotiana tabacum UDP-glucuronate decarboxylase 1... 62 2e-06
15dbj|AB059568.1| Pisum sativum uxs1 mRNA for UDP-D-glucuronate ca... 54 5e-04
16emb|AJ275318.1|CAR275318 Cicer arietinum mRNA for dTDP-glucose 4... 52 0.002
17ref|NM_114511.2| Arabidopsis thaliana UXS5; catalytic AT3G46440 ... 46 0.12
18ref|NM_001035743.1| Arabidopsis thaliana UXS5; catalytic AT3G464... 46 0.12
19ref|NM_116149.2| Arabidopsis thaliana unknown protein AT3G62840 ... 46 0.12
20ref|NM_116148.1| Arabidopsis thaliana UXS2 (UDP-GLUCURONIC ACID ... 46 0.12
21gb|AY143897.1| Arabidopsis thaliana At3g62830/F26K9_260 mRNA, co... 46 0.12
22gb|AY096586.1| Arabidopsis thaliana putative dTDP-glucose 4-6-de... 46 0.12
23gb|AY072098.1| Arabidopsis thaliana putative dTDP-glucose 4-6-de... 46 0.12
24emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BA... 46 0.12
25emb|AL133298.1|ATF18L15 Arabidopsis thaliana DNA chromosome 3, B... 46 0.12
26gb|AF361617.1| Arabidopsis thaliana AT3g62830/F26K9_260 mRNA, co... 46 0.12
27gb|AY050389.1| Arabidopsis thaliana AT3g62830/F26K9_260 mRNA, co... 46 0.12
28emb|BX823718.1|CNS0A7QP Arabidopsis thaliana Full-length cDNA Co... 46 0.12
29emb|BX824968.1|CNS0A6QT Arabidopsis thaliana Full-length cDNA Co... 46 0.12
30emb|BX822583.1|CNS0A63N Arabidopsis thaliana Full-length cDNA Co... 46 0.12
31emb|BX825822.1|CNS0A4P6 Arabidopsis thaliana Full-length cDNA Co... 46 0.12
32gb|AY087118.1| Arabidopsis thaliana clone 31901 mRNA, complete s... 46 0.12
33gb|AF387788.1| Arabidopsis thaliana UDP-glucuronic acid decarbox... 46 0.12
34emb|Z49239.1|ATD18MR A.thaliana mRNA for putative dTDP-glucose 4... 46 0.12
35gb|AC152937.21| Medicago truncatula clone mth2-96n6, complete se... 44 0.49
36gb|AC155339.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 44 0.49
37gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 44 0.49
38gb|AC122912.2| Mus musculus BAC clone RP23-61E5 from 7, complete... 42 1.9
39gb|U23514.3| Caenorhabditis elegans cosmid F48E8, complete sequence 40 7.6
40gb|AC125125.4| Mus musculus BAC clone RP24-274E6 from chromosome... 40 7.6
41emb|AL592430.8| Human DNA sequence from clone RP11-388P9 on chro... 40 7.6
42emb|BX908396.13| Zebrafish DNA sequence from clone CH211-267G5 i... 40 7.6
43gb|AC105282.5| Homo sapiens chromosome 18, clone RP11-452F20, co... 40 7.6
44gb|AC110615.3| Homo sapiens BAC clone RP11-556N4 from 4, complet... 40 7.6
45gb|AC091643.6| Homo sapiens chromosome 18, clone RP11-727B4, com... 40 7.6
46gb|AC159135.11| Mus musculus 10 BAC RP23-184H24 (Roswell Park Ca... 40 7.6
47gb|AC099760.5| Mus musculus BAC clone RP23-122E16 from chromosom... 40 7.6
48gb|AC159335.10| Mus musculus 10 BAC RP24-447O4 (Roswell Park Can... 40 7.6
49emb|CT025908.12| Zebrafish DNA sequence from clone CH211-163B1 i... 40 7.6
50gb|AY108129.1| Zea mays PCO069672 mRNA sequence 40 7.6
51emb|CT009662.23| Mouse DNA sequence from clone CH29-511O15 on ch... 40 7.6
52gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 7.6
53emb|AL929024.9| Mouse DNA sequence from clone RP23-480H10 on chr... 40 7.6
54gb|M15265.1|CUCPHT Cucurbita pepo (zucchini) phytochrome mRNA, c... 40 7.6 
>gb|AY677177.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS1) mRNA, complete
            cds
          Length = 1433

 Score = 1100 bits (555), Expect = 0.0
 Identities = 562/563 (99%), Gaps = 1/563 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    gttccgcaaaaagcgggagtaatacaaacagccaggccttgtatataaagtttctaataa 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1335 gttccgcaaaaagcgggagtaatacaaacagccaggccttgtatataaagtttctaataa 1276

                                                                        
Query: 61   tacaatctttcaagtgaacgacaaaggtgtaattggtttattggaactcaaattccgtaa 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1275 tacaatctttcaagtgaacgacaaaggtgtaattggtttattggaactcaaattccgtaa 1216

                                                                        
Query: 121  cgaaacacagcaacgaatattgacgaacccacccaactatgagtatgctctggcaaattg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1215 cgaaacacagcaacgaatattgacgaacccacccaactatgagtatgctctggcaaattg 1156

                                                                        
Query: 181  gtgatgtacgccaaacgcagggaagtggccttaggccttggccttcttgggcactgccaa 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1155 gtgatgtacgccaaacgcagggaagtggccttaggccttggccttcttgggcactgccaa 1096

                                                                        
Query: 241  acgctcccggaagtcgtcctccatgagcaccaagccgtcacgtaggacgaccttgggctc 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 acgctcccggaagtcgtcctccatgagcaccaagccgtcacgtaggacgaccttgggctc 1036

                                                                        
Query: 301  ccagtcaagaacctcctttgcctttgtgatgtcaggcttcctctggcgagggtcatcagg 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 ccagtcaagaacctcctttgcctttgtgatgtcaggcttcctctggcgagggtcatcagg 976

                                                                        
Query: 361  agtgttctcagtcatcgtcactgtcacctctgggttgatcaactccttcacgttctcagc 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975  agtgttctcagtcatcgtcactgtcacctctgggttgatcaactccttcacgttctcagc 916

                                                                        
Query: 421  aagttccagcatggtgaattcaccctgggttcccaatgttaatgggtccagtgttgtctc 480
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 915  aagttccagcatggtgaattca-cctgggttcccaatgttaatgggtccagtgttgtctc 857

                                                                        
Query: 481  cattcatcagcttcataagaccattgaccatatcagcaacgtagcagaagctcctagtct 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856  cattcatcagcttcataagaccattgaccatatcagcaacgtagcagaagctcctagtct 797

                                   
Query: 541  gtgttcctggcttctggacagtc 563
            |||||||||||||||||||||||
Sbjct: 796  gtgttcctggcttctggacagtc 774
to top
>emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-glucose dehydratase (tgp gene)
          Length = 1562

 Score =  430 bits (217), Expect = e-117
 Identities = 320/353 (90%), Gaps = 1/353 (0%)
 Strand = Plus / Minus

                                                                        
Query: 211  ttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcac 270
            ||||||||| | || ||||||||| ||||  |||||||||||||| ||||||||||||||
Sbjct: 1291 ttaggccttagtctccttgggcacagccaggcgctcccggaagtcatcctccatgagcac 1232

                                                                        
Query: 271  caagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtgat 330
            |||||||||||| || |||||||| ||||||||  | ||||| ||||| |||||||||||
Sbjct: 1231 caagccgtcacgcagaacgaccttaggctcccaccccagaacttccttcgcctttgtgat 1172

                                                                        
Query: 331  gtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacctc 390
            ||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 1171 gtctggcttcctctggcgaggatcatcaggagtgttctcggtcatcgtcactgtcacctc 1112

                                                                        
Query: 391  tgggttgatcaactccttcacgttctcagcaagttccagcatggtgaattcaccctgggt 450
            ||||||||||||||| ||||| ||||||||||||||||||||||| |||||| |||||||
Sbjct: 1111 tgggttgatcaactctttcactttctcagcaagttccagcatggtaaattca-cctgggt 1053

                                                                        
Query: 451  tcccaatgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgacca 510
            | || |  ||||| ||||||||||||| ||||||||||||||| ||||||||||  ||||
Sbjct: 1052 tgcccaaattaatcggtccagtgttgtttccattcatcagcttaataagaccatcaacca 993

                                                                 
Query: 511  tatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtc 563
            |||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992  tatcggcgacgtagcagaagctcctagtctgtgttcctggcttctggacagtc 940



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                        
Query: 58   taatacaatctttcaagtgaacgacaaaggtgtaattggtttattggaactcaaattccg 117
            |||||||||||||||| |||||||||| | |||| |  ||||||||||||||||||||||
Sbjct: 1419 taatacaatctttcaattgaacgacaacgatgtattcagtttattggaactcaaattccg 1360

                    
Query: 118  taacgaaa 125
            ||| ||||
Sbjct: 1359 taatgaaa 1352
to top
>gb|AY104952.1| Zea mays PCO092342 mRNA sequence
          Length = 1825

 Score =  381 bits (192), Expect = e-102
 Identities = 313/352 (88%), Gaps = 1/352 (0%)
 Strand = Plus / Minus

                                                                        
Query: 211  ttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagcac 270
            |||||||||||  ||||||||||| ||||  ||||||||||| || ||||||||||||||
Sbjct: 1535 ttaggccttggttttcttgggcacggccaggcgctcccggaaatcatcctccatgagcac 1476

                                                                        
Query: 271  caagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtgat 330
            |||||||||    ||||||| ||||||||||||  | ||||| ||||||||||| |||||
Sbjct: 1475 caagccgtccttcaggacgatcttgggctcccaccctagaacttcctttgccttggtgat 1416

                                                                        
Query: 331  gtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacctc 390
            ||| |||||||||||||| || ||||||||||||||||| |||||||||||||| |  ||
Sbjct: 1415 gtccggcttcctctggcggggatcatcaggagtgttctcggtcatcgtcactgttatatc 1356

                                                                        
Query: 391  tgggttgatcaactccttcacgttctcagcaagttccagcatggtgaattcaccctgggt 450
            |||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 1355 tgggttaatcaactccttcacattctcagcaagttccagcatggtgaattca-cctgggt 1297

                                                                        
Query: 451  tcccaatgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgacca 510
            |||| | |||||| ||||||||||||| ||| ||||||||| | ||||||||||  ||||
Sbjct: 1296 tccccaagttaatcggtccagtgttgtttccgttcatcagcctaataagaccatcaacca 1237

                                                                
Query: 511  tatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagt 562
            |||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1236 tatcggcgacatagcagaagctcctagtctgtgttcctggcttctggacagt 1185



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 64/75 (85%), Gaps = 1/75 (1%)
 Strand = Plus / Minus

                                                                        
Query: 52   ttctaataatacaatctttcaag-tgaacgacaaaggtgtaattggtttattggaactca 110
            ||||||| |||||||| |||||| ||| |||  ||||| || |  |||||||||||||||
Sbjct: 1684 ttctaatgatacaatccttcaaggtgatcgaagaaggtatattccgtttattggaactca 1625

                           
Query: 111  aattccgtaacgaaa 125
            |||||||||| ||||
Sbjct: 1624 aattccgtaatgaaa 1610
to top
>dbj|AB079064.1| Oryza sativa (japonica cultivar-group) UXS-3 mRNA for UDP-glucuronic
            acid decarboxylase, complete cds
          Length = 1053

 Score =  353 bits (178), Expect = 4e-94
 Identities = 287/322 (89%), Gaps = 1/322 (0%)
 Strand = Plus / Minus

                                                                        
Query: 242  cgctcccggaagtcgtcctccatgagcaccaagccgtcacgtaggacgaccttgggctcc 301
            ||||||||||| || || ||||||||||||||||| ||||| || |||| ||||||||||
Sbjct: 1022 cgctcccggaaatcatcttccatgagcaccaagccatcacgcagaacgatcttgggctcc 963

                                                                        
Query: 302  cagtcaagaacctcctttgcctttgtgatgtcaggcttcctctggcgagggtcatcagga 361
            ||  | | ||| |||||||||||||| ||||| ||||||||||| ||||| |||||||||
Sbjct: 962  caccccaaaacttcctttgcctttgtaatgtctggcttcctctgacgaggatcatcagga 903

                                                                        
Query: 362  gtgttctcagtcatcgtcactgtcacctctgggttgatcaactccttcacgttctcagca 421
            |||||||||||||| || || || |||||||||||||||||||||||||| |||||||||
Sbjct: 902  gtgttctcagtcattgtgacggtaacctctgggttgatcaactccttcacattctcagca 843

                                                                        
Query: 422  agttccagcatggtgaattcaccctgggttcccaatgttaatgggtccagtgttgtctcc 481
            ||||||||||||||||||||| |||||||| || |  ||||| |||||||||||||| ||
Sbjct: 842  agttccagcatggtgaattca-cctgggtttcccaaattaattggtccagtgttgtcccc 784

                                                                        
Query: 482  attcatcagcttcataagaccattgaccatatcagcaacgtagcagaagctcctagtctg 541
             ||||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||| ||
Sbjct: 783  gttcatcagcttaataagaccattaaccatgtcagcaacatagcagaagctcctagtttg 724

                                  
Query: 542  tgttcctggcttctggacagtc 563
            ||||||||||||||| ||||||
Sbjct: 723  tgttcctggcttctgaacagtc 702
to top
>dbj|AK100908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132F05, full
            insert sequence
          Length = 1811

 Score =  353 bits (178), Expect = 4e-94
 Identities = 311/354 (87%), Gaps = 1/354 (0%)
 Strand = Plus / Minus

                                                                        
Query: 210  cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 269
            ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 1542 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 1483

                                                                        
Query: 270  ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 329
            ||||||| ||||| || |||| ||||||||||||  | | ||| |||||||||||||| |
Sbjct: 1482 ccaagccatcacgcagaacgatcttgggctcccaccccaaaacttcctttgcctttgtaa 1423

                                                                        
Query: 330  tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 389
            |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 1422 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 1363

                                                                        
Query: 390  ctgggttgatcaactccttcacgttctcagcaagttccagcatggtgaattcaccctggg 449
            |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 1362 ctgggttgatcaactccttcacattctcagcaagttccagcatggtgaattca-cctggg 1304

                                                                        
Query: 450  ttcccaatgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgacc 509
            || || |  ||||| |||||||||||||| || ||||||||||| ||||||||||| |||
Sbjct: 1303 tttcccaaattaattggtccagtgttgtccccgttcatcagcttaataagaccattaacc 1244

                                                                  
Query: 510  atatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtc 563
            || |||||||| ||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 1243 atgtcagcaacatagcagaagctcctagtttgtgttcctggcttctgaacagtc 1190



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 52   ttctaataatacaatctttcaagtgaacgacaaaggtgta 91
            ||||| ||| ||||| ||||| |||||| |||||||||||
Sbjct: 1692 ttctagtaacacaatatttcaggtgaacaacaaaggtgta 1653
to top
>dbj|AK060031.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H02, full
            insert sequence
          Length = 1411

 Score =  353 bits (178), Expect = 4e-94
 Identities = 311/354 (87%), Gaps = 1/354 (0%)
 Strand = Plus / Minus

                                                                        
Query: 210  cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 269
            ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 1153 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 1094

                                                                        
Query: 270  ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 329
            ||||||| ||||| || |||| ||||||||||||  | | ||| |||||||||||||| |
Sbjct: 1093 ccaagccatcacgcagaacgatcttgggctcccaccccaaaacttcctttgcctttgtaa 1034

                                                                        
Query: 330  tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 389
            |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 1033 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 974

                                                                        
Query: 390  ctgggttgatcaactccttcacgttctcagcaagttccagcatggtgaattcaccctggg 449
            |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 973  ctgggttgatcaactccttcacattctcagcaagttccagcatggtgaattca-cctggg 915

                                                                        
Query: 450  ttcccaatgttaatgggtccagtgttgtctccattcatcagcttcataagaccattgacc 509
            || || |  ||||| |||||||||||||| || ||||||||||| ||||||||||| |||
Sbjct: 914  tttcccaaattaattggtccagtgttgtccccgttcatcagcttaataagaccattaacc 855

                                                                  
Query: 510  atatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtc 563
            || |||||||| ||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 854  atgtcagcaacatagcagaagctcctagtttgtgttcctggcttctgaacagtc 801



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 52   ttctaataatacaatctttcaagtgaacgacaaaggtgta 91
            ||||| ||| ||||| ||||| |||||| |||||||||||
Sbjct: 1303 ttctagtaacacaatatttcaggtgaacaacaaaggtgta 1264
to top
>gb|BT019083.1| Zea mays clone Contig672.F mRNA sequence
          Length = 958

 Score =  343 bits (173), Expect = 4e-91
 Identities = 285/321 (88%), Gaps = 1/321 (0%)
 Strand = Plus / Minus

                                                                       
Query: 243 gctcccggaagtcgtcctccatgagcaccaagccgtcacgtaggacgaccttgggctccc 302
           |||||||||| || ||||||||||||||||||||||| |  |||| ||  ||||||||||
Sbjct: 787 gctcccggaaatcatcctccatgagcaccaagccgtcccccaggaagattttgggctccc 728

                                                                       
Query: 303 agtcaagaacctcctttgcctttgtgatgtcaggcttcctctggcgagggtcatcaggag 362
           |  | | ||| |||||  |||||||||| || ||||||||||| || |||||||||||||
Sbjct: 727 atcccaaaacttccttcccctttgtgatatccggcttcctctgacgggggtcatcaggag 668

                                                                       
Query: 363 tgttctcagtcatcgtcactgtcacctctgggttgatcaactccttcacgttctcagcaa 422
           ||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 667 tgttctcggtcattgtcactgtcacatctgggttgatcaactccttcacattctcagcaa 608

                                                                       
Query: 423 gttccagcatggtgaattcaccctgggttcccaatgttaatgggtccagtgttgtctcca 482
           |||||||||||||||||||| ||||||||||| | |||||| |||||||| |||| ||||
Sbjct: 607 gttccagcatggtgaattca-cctgggttccccaagttaatcggtccagtcttgtttcca 549

                                                                       
Query: 483 ttcatcagcttcataagaccattgaccatatcagcaacgtagcagaagctcctagtctgt 542
           ||||||||||| ||||||||||  |||||||| ||||| |||||||| ||||||||||||
Sbjct: 548 ttcatcagcttaataagaccatcaaccatatcggcaacatagcagaaactcctagtctgt 489

                                
Query: 543 gttcctggcttctggacagtc 563
           ||||||||| |||||||||||
Sbjct: 488 gttcctggcctctggacagtc 468



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 101 ttggaactcaaattccgtaacgaaa 125
           |||||||||||||||||||| ||||
Sbjct: 921 ttggaactcaaattccgtaatgaaa 897
to top
>dbj|AK061632.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-A03, full
           insert sequence
          Length = 472

 Score =  180 bits (91), Expect = 3e-42
 Identities = 178/207 (85%)
 Strand = Plus / Minus

                                                                       
Query: 210 cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 269
           ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 207 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 148

                                                                       
Query: 270 ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 329
           ||||||| ||||| || |||| | ||||||||||  | | |||||||||||||||||| |
Sbjct: 147 ccaagccatcacgcagaacgatcctgggctcccaccccaaaacctcctttgcctttgtaa 88

                                                                       
Query: 330 tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 389
           |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 87  tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 28

                                      
Query: 390 ctgggttgatcaactccttcacgttct 416
           |||||||||||||||||||||| ||||
Sbjct: 27  ctgggttgatcaactccttcacattct 1



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 52  ttctaataatacaatctttcaagtgaacgacaaaggtgta 91
           ||||| ||| ||||| ||||| |||||| |||||||||||
Sbjct: 357 ttctagtaacacaatatttcaggtgaacaacaaaggtgta 318
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  165 bits (83), Expect = 2e-37
 Identities = 167/195 (85%)
 Strand = Plus / Minus

                                                                           
Query: 210     cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 269
               ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 9412292 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 9412233

                                                                           
Query: 270     ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 329
               ||||||| ||||| || |||| ||||||||||||  | | ||| |||||||||||||| |
Sbjct: 9412232 ccaagccatcacgcagaacgatcttgggctcccaccccaaaacttcctttgcctttgtaa 9412173

                                                                           
Query: 330     tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 389
               |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 9412172 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 9412113

                              
Query: 390     ctgggttgatcaact 404
               |||||||||||||||
Sbjct: 9412112 ctgggttgatcaact 9412098



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                        
Query: 507     accatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtc 563
               ||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 9411692 accatgtcagcaacatagcagaagctcctagtttgtgttcctggcttctgaacagtc 9411636



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                         
Query: 403     ctccttcacgttctcagcaagttccagcatggtgaattcacc 444
               ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 9412015 ctccttcacattctcagcaagttccagcatggtgaattcacc 9411974



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                              
Query: 459     ttaatgggtccagtgttgtctccattcatcagcttcataagaccatt 505
               ||||| |||||||||||||| || ||||||||||| |||||||||||
Sbjct: 9411835 ttaattggtccagtgttgtccccgttcatcagcttaataagaccatt 9411789



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                       
Query: 52      ttctaataatacaatctttcaagtgaacgacaaaggtgta 91
               ||||| ||| ||||| ||||| |||||| |||||||||||
Sbjct: 9412442 ttctagtaacacaatatttcaggtgaacaacaaaggtgta 9412403
to top
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score =  165 bits (83), Expect = 2e-37
 Identities = 167/195 (85%)
 Strand = Plus / Minus

                                                                          
Query: 210    cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 269
              ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 109692 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 109633

                                                                          
Query: 270    ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 329
              ||||||| ||||| || |||| ||||||||||||  | | ||| |||||||||||||| |
Sbjct: 109632 ccaagccatcacgcagaacgatcttgggctcccaccccaaaacttcctttgcctttgtaa 109573

                                                                          
Query: 330    tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 389
              |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 109572 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 109513

                             
Query: 390    ctgggttgatcaact 404
              |||||||||||||||
Sbjct: 109512 ctgggttgatcaact 109498



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                       
Query: 507    accatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtc 563
              ||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 109092 accatgtcagcaacatagcagaagctcctagtttgtgttcctggcttctgaacagtc 109036



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                        
Query: 403    ctccttcacgttctcagcaagttccagcatggtgaattcacc 444
              ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 109415 ctccttcacattctcagcaagttccagcatggtgaattcacc 109374



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                             
Query: 459    ttaatgggtccagtgttgtctccattcatcagcttcataagaccatt 505
              ||||| |||||||||||||| || ||||||||||| |||||||||||
Sbjct: 109235 ttaattggtccagtgttgtccccgttcatcagcttaataagaccatt 109189



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                      
Query: 52     ttctaataatacaatctttcaagtgaacgacaaaggtgta 91
              ||||| ||| ||||| ||||| |||||| |||||||||||
Sbjct: 109842 ttctagtaacacaatatttcaggtgaacaacaaaggtgta 109803
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  165 bits (83), Expect = 2e-37
 Identities = 167/195 (85%)
 Strand = Plus / Minus

                                                                           
Query: 210     cttaggccttggccttcttgggcactgccaaacgctcccggaagtcgtcctccatgagca 269
               ||||||||| |  |||||||||||||   |  ||||||||||| || || ||||||||||
Sbjct: 9410413 cttaggcctggttcttcttgggcacttggaggcgctcccggaaatcatcttccatgagca 9410354

                                                                           
Query: 270     ccaagccgtcacgtaggacgaccttgggctcccagtcaagaacctcctttgcctttgtga 329
               ||||||| ||||| || |||| ||||||||||||  | | ||| |||||||||||||| |
Sbjct: 9410353 ccaagccatcacgcagaacgatcttgggctcccaccccaaaacttcctttgcctttgtaa 9410294

                                                                           
Query: 330     tgtcaggcttcctctggcgagggtcatcaggagtgttctcagtcatcgtcactgtcacct 389
               |||| ||||||||||| ||||| ||||||||||||||||||||||| || || || ||||
Sbjct: 9410293 tgtctggcttcctctgacgaggatcatcaggagtgttctcagtcattgtgacggtaacct 9410234

                              
Query: 390     ctgggttgatcaact 404
               |||||||||||||||
Sbjct: 9410233 ctgggttgatcaact 9410219



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                        
Query: 507     accatatcagcaacgtagcagaagctcctagtctgtgttcctggcttctggacagtc 563
               ||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 9409813 accatgtcagcaacatagcagaagctcctagtttgtgttcctggcttctgaacagtc 9409757



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                         
Query: 403     ctccttcacgttctcagcaagttccagcatggtgaattcacc 444
               ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 9410136 ctccttcacattctcagcaagttccagcatggtgaattcacc 9410095



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                              
Query: 459     ttaatgggtccagtgttgtctccattcatcagcttcataagaccatt 505
               ||||| |||||||||||||| || ||||||||||| |||||||||||
Sbjct: 9409956 ttaattggtccagtgttgtccccgttcatcagcttaataagaccatt 9409910



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                       
Query: 52      ttctaataatacaatctttcaagtgaacgacaaaggtgta 91
               ||||| ||| ||||| ||||| |||||| |||||||||||
Sbjct: 9410563 ttctagtaacacaatatttcaggtgaacaacaaaggtgta 9410524
to top
>gb|U82433.1|PAU82433 Prunus armeniaca thymidine diphospho-glucose 4-6-dehydratase
           homolog mRNA, partial cds
          Length = 1012

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                    
Query: 314 tcctttgcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 370
           ||||| || ||||||||||||||||||||||||||||| ||||| || |||||||||
Sbjct: 702 tccttcgcttttgtgatgtcaggcttcctctggcgaggatcatccggcgtgttctca 646



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 67/79 (84%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                       
Query: 403 ctccttcacgttctcagcaagttccagcatggtgaattcaccctgggttcccaatgttaa 462
           ||||||||| ||||| ||||| || | ||| || |||||||| ||| || |||||||| |
Sbjct: 613 ctccttcacattctcggcaagctcgatcattgtaaattcacc-tggatttccaatgttga 555

                              
Query: 463 tgggtccagtgttgtctcc 481
           | |||||||||||||||||
Sbjct: 554 tcggtccagtgttgtctcc 536
to top
>gb|AY922315.1| Populus tomentosa UDP-glucuronic acid decarboxylase 3 (UXS3) mRNA,
           complete cds
          Length = 1129

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 315 cctttgcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctc 369
           ||||||||||||| |||||||| |||||||| || || ||||||||||| |||||
Sbjct: 981 cctttgcctttgtaatgtcaggtttcctctgtcgtggatcatcaggagtattctc 927



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 67/79 (84%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                       
Query: 403 ctccttcacgttctcagcaagttccagcatggtgaattcaccctgggttcccaatgttaa 462
           |||||||||  |||||||||| ||   |||||| ||||| ||||||||| |||||||| |
Sbjct: 893 ctccttcactgtctcagcaagctcggtcatggtaaattc-ccctgggtttccaatgttga 835

                              
Query: 463 tgggtccagtgttgtctcc 481
           | ||||||||||| |||||
Sbjct: 834 ttggtccagtgttctctcc 816
to top
>gb|AY619950.1| Nicotiana tabacum UDP-glucuronate decarboxylase 1 mRNA, complete
           cds
          Length = 1279

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 68/79 (86%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                       
Query: 403 ctccttcacgttctcagcaagttccagcatggtgaattcaccctgggttcccaatgttaa 462
           ||||||||| ||||| || ||||| | ||| ||||||||||| ||| || ||||||||||
Sbjct: 878 ctccttcacattctccgcgagttcaatcatcgtgaattcacc-tggatttccaatgttaa 820

                              
Query: 463 tgggtccagtgttgtctcc 481
           | ||||||||||| |||||
Sbjct: 819 ttggtccagtgttatctcc 801



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 317 tttgcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgtt 366
           ||||||||||||||||| || || ||||| ||||| ||||| ||||||||
Sbjct: 964 tttgcctttgtgatgtccggttttctctgccgaggatcatctggagtgtt 915
to top
>dbj|AB059568.1| Pisum sativum uxs1 mRNA for UDP-D-glucuronate carboxy-lyase,
           complete cds
          Length = 1406

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 403 ctccttcacgttctcagcaagttccagcatggtgaattcaccc 445
           |||||||||  ||||||||||||| ||||| ||||||||||||
Sbjct: 973 ctccttcactgtctcagcaagttcaagcatagtgaattcaccc 931
to top
>emb|AJ275318.1|CAR275318 Cicer arietinum mRNA for dTDP-glucose 4-6-dehydratase
          Length = 1356

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 403 ctccttcacgttctcagcaagttccagcatggtgaattcacc 444
           |||||||||  ||||||||||||| ||||| |||||||||||
Sbjct: 913 ctccttcactgtctcagcaagttcaagcattgtgaattcacc 872
to top
>ref|NM_114511.2| Arabidopsis thaliana UXS5; catalytic AT3G46440 (UXS5) transcript
            variant AT3G46440.1 mRNA, complete cds
          Length = 1374

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 320  gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 370
            |||||||||||||| ||||||||||| |  || ||||| || |||||||||
Sbjct: 1051 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 1001
to top
>ref|NM_001035743.1| Arabidopsis thaliana UXS5; catalytic AT3G46440 (UXS5) transcript
            variant AT3G46440.2 mRNA, complete cds
          Length = 1464

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 320  gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 370
            |||||||||||||| ||||||||||| |  || ||||| || |||||||||
Sbjct: 1141 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 1091
to top
>ref|NM_116149.2| Arabidopsis thaliana unknown protein AT3G62840 mRNA, complete cds
          Length = 1063

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 320  gcctttgtgatgtcaggcttcctctggcgagggtc 354
            |||||||||||||||||||| |||| | |||||||
Sbjct: 966  gcctttgtgatgtcaggctttctcttgtgagggtc 1000
to top
>ref|NM_116148.1| Arabidopsis thaliana UXS2 (UDP-GLUCURONIC ACID DECARBOXYLASE 2);
            catalytic/ dTDP-glucose 4,6-dehydratase AT3G62830 (UXS2)
            mRNA, complete cds
          Length = 1338

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 320  gcctttgtgatgtcaggcttcctctggcgagggtc 354
            |||||||||||||||||||| |||| | |||||||
Sbjct: 1193 gcctttgtgatgtcaggctttctcttgtgagggtc 1159
to top
>gb|AY143897.1| Arabidopsis thaliana At3g62830/F26K9_260 mRNA, complete cds
          Length = 1338

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 320  gcctttgtgatgtcaggcttcctctggcgagggtc 354
            |||||||||||||||||||| |||| | |||||||
Sbjct: 1193 gcctttgtgatgtcaggctttctcttgtgagggtc 1159
to top
>gb|AY096586.1| Arabidopsis thaliana putative dTDP-glucose 4-6-dehydratases
           (At3g46440) mRNA, complete cds
          Length = 1057

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 320 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 370
           |||||||||||||| ||||||||||| |  || ||||| || |||||||||
Sbjct: 926 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 876
to top
>gb|AY072098.1| Arabidopsis thaliana putative dTDP-glucose 4-6-dehydratase
            (At3g46440) mRNA, complete cds
          Length = 1356

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 320  gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 370
            |||||||||||||| ||||||||||| |  || ||||| || |||||||||
Sbjct: 1051 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 1001
to top
>emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9
          Length = 110257

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 320   gcctttgtgatgtcaggcttcctctggcgagggtc 354
             |||||||||||||||||||| |||| | |||||||
Sbjct: 88182 gcctttgtgatgtcaggctttctcttgtgagggtc 88148
to top
>emb|AL133298.1|ATF18L15 Arabidopsis thaliana DNA chromosome 3, BAC clone F18L15
          Length = 100328

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                
Query: 320   gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 370
             |||||||||||||| ||||||||||| |  || ||||| || |||||||||
Sbjct: 75554 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 75604
to top
>gb|AF361617.1| Arabidopsis thaliana AT3g62830/F26K9_260 mRNA, complete cds
          Length = 1663

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 320  gcctttgtgatgtcaggcttcctctggcgagggtc 354
            |||||||||||||||||||| |||| | |||||||
Sbjct: 1346 gcctttgtgatgtcaggctttctcttgtgagggtc 1312
to top
>gb|AY050389.1| Arabidopsis thaliana AT3g62830/F26K9_260 mRNA, complete cds
          Length = 1701

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 320  gcctttgtgatgtcaggcttcctctggcgagggtc 354
            |||||||||||||||||||| |||| | |||||||
Sbjct: 1346 gcctttgtgatgtcaggctttctcttgtgagggtc 1312
to top
>emb|BX823718.1|CNS0A7QP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS6ZC01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1114

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 320 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 370
           |||||||||||||| ||||||||||| |  || ||||| || |||||||||
Sbjct: 876 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 826
to top
>emb|BX824968.1|CNS0A6QT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH86ZD03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1211

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 320 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 370
           |||||||||||||| ||||||||||| |  || ||||| || |||||||||
Sbjct: 950 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 900
to top
>emb|BX822583.1|CNS0A63N Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB50ZB02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 451

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 320 gcctttgtgatgtcaggcttcctctggcgagggtc 354
           |||||||||||||||||||| |||| | |||||||
Sbjct: 92  gcctttgtgatgtcaggctttctcttgtgagggtc 58
to top
>emb|BX825822.1|CNS0A4P6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL65ZB07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 923

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 320 gcctttgtgatgtcaggcttcctctggcgagggtc 354
           |||||||||||||||||||| |||| | |||||||
Sbjct: 564 gcctttgtgatgtcaggctttctcttgtgagggtc 530
to top
>gb|AY087118.1| Arabidopsis thaliana clone 31901 mRNA, complete sequence
          Length = 1281

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 320 gcctttgtgatgtcaggcttcctctggcgagggtcatcaggagtgttctca 370
           |||||||||||||| ||||||||||| |  || ||||| || |||||||||
Sbjct: 987 gcctttgtgatgtctggcttcctctgtcttggatcatccggtgtgttctca 937
to top
>gb|AF387788.1| Arabidopsis thaliana UDP-glucuronic acid decarboxylase (UXS2) mRNA,
            complete cds
          Length = 1338

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 320  gcctttgtgatgtcaggcttcctctggcgagggtc 354
            |||||||||||||||||||| |||| | |||||||
Sbjct: 1193 gcctttgtgatgtcaggctttctcttgtgagggtc 1159
to top
>emb|Z49239.1|ATD18MR A.thaliana mRNA for putative dTDP-glucose 4-6-dehydratases
          Length = 1660

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 320  gcctttgtgatgtcaggcttcctctggcgagggtc 354
            |||||||||||||||||||| |||| | |||||||
Sbjct: 1332 gcctttgtgatgtcaggctttctcttgtgagggtc 1298
to top
>gb|AC152937.21| Medicago truncatula clone mth2-96n6, complete sequence
          Length = 108802

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 419   gcaagttccagcatggtgaattcacc 444
             ||||||||||||||||| ||||||||
Sbjct: 40939 gcaagttccagcatggtaaattcacc 40964
to top
>gb|AC155339.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
             clone KBrH015H17, complete sequence
          Length = 110885

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 320   gcctttgtgatgtcaggcttcctctggcgagggtcatc 357
             |||||||| ||||||||||| |||| | ||||||||||
Sbjct: 19871 gcctttgtaatgtcaggctttctcttgtgagggtcatc 19834
to top
>gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone
              KBrH001H24, complete sequence
          Length = 118144

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 320    gcctttgtgatgtcaggcttcctctggcgagggtcatc 357
              |||||||| ||||||||||| |||| | ||||||||||
Sbjct: 106049 gcctttgtaatgtcaggctttctcttgtgagggtcatc 106012
to top
>gb|AC122912.2| Mus musculus BAC clone RP23-61E5 from 7, complete sequence
          Length = 255062

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 320    gcctttgtgatgtcaggcttc 340
              |||||||||||||||||||||
Sbjct: 163613 gcctttgtgatgtcaggcttc 163593
to top
>gb|U23514.3| Caenorhabditis elegans cosmid F48E8, complete sequence
          Length = 35325

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    aaagtttctaataatacaat 66
             ||||||||||||||||||||
Sbjct: 20319 aaagtttctaataatacaat 20300
to top
>gb|AC125125.4| Mus musculus BAC clone RP24-274E6 from chromosome 8, complete sequence
          Length = 180801

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 397    gatcaactccttcacgttct 416
              ||||||||||||||||||||
Sbjct: 157934 gatcaactccttcacgttct 157915
to top
>emb|AL592430.8| Human DNA sequence from clone RP11-388P9 on chromosome 10 Contains part
              of the ANK3 gene for ankyrin 3, node of Ranvier (ankyrin G)
              and a novel gene, complete sequence
          Length = 145136

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     aaagtttctaataatacaat 66
              ||||||||||||||||||||
Sbjct: 103537 aaagtttctaataatacaat 103518
to top
>emb|BX908396.13| Zebrafish DNA sequence from clone CH211-267G5 in linkage group 18,
              complete sequence
          Length = 149493

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 46     taaagtttctaataatacaa 65
              ||||||||||||||||||||
Sbjct: 107638 taaagtttctaataatacaa 107657
to top
>gb|AC105282.5| Homo sapiens chromosome 18, clone RP11-452F20, complete sequence
          Length = 167258

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 489    agcttcataagaccattgac 508
              ||||||||||||||||||||
Sbjct: 166392 agcttcataagaccattgac 166411
to top
>gb|AC110615.3| Homo sapiens BAC clone RP11-556N4 from 4, complete sequence
          Length = 195101

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    tatataaagtttctaataat 61
             ||||||||||||||||||||
Sbjct: 13115 tatataaagtttctaataat 13096
to top
>gb|AC091643.6| Homo sapiens chromosome 18, clone RP11-727B4, complete sequence
          Length = 169944

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 489   agcttcataagaccattgac 508
             ||||||||||||||||||||
Sbjct: 68254 agcttcataagaccattgac 68273
to top
>gb|AC159135.11| Mus musculus 10 BAC RP23-184H24 (Roswell Park Cancer Institute
           (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 207228

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 80  gacaaaggtgtaattggttt 99
           ||||||||||||||||||||
Sbjct: 337 gacaaaggtgtaattggttt 318
to top
>gb|AC099760.5| Mus musculus BAC clone RP23-122E16 from chromosome 8, complete sequence
          Length = 193884

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    ttggccttcttgggcactgc 237
              ||||||||||||||||||||
Sbjct: 153079 ttggccttcttgggcactgc 153098
to top
>gb|AC159335.10| Mus musculus 10 BAC RP24-447O4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 135177

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    gacaaaggtgtaattggttt 99
             ||||||||||||||||||||
Sbjct: 76946 gacaaaggtgtaattggttt 76927
to top
>emb|CT025908.12| Zebrafish DNA sequence from clone CH211-163B1 in linkage group 18,
              complete sequence
          Length = 176163

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     taaagtttctaataatacaa 65
              ||||||||||||||||||||
Sbjct: 165685 taaagtttctaataatacaa 165666
to top
>gb|AY108129.1| Zea mays PCO069672 mRNA sequence
          Length = 984

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 293 ttgggctcccagtcaagaac 312
           ||||||||||||||||||||
Sbjct: 623 ttgggctcccagtcaagaac 604
to top
>emb|CT009662.23| Mouse DNA sequence from clone CH29-511O15 on chromosome 17, complete
              sequence
          Length = 231197

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 158    tatgagtatgctctggcaaa 177
              ||||||||||||||||||||
Sbjct: 208325 tatgagtatgctctggcaaa 208306
to top
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 422    agttccagcatggtgaattc 441
              ||||||||||||||||||||
Sbjct: 372396 agttccagcatggtgaattc 372377
to top
>emb|AL929024.9| Mouse DNA sequence from clone RP23-480H10 on chromosome 2, complete
             sequence
          Length = 159617

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   ttggccttcttgggcactgc 237
             ||||||||||||||||||||
Sbjct: 53068 ttggccttcttgggcactgc 53049
to top
>gb|M15265.1|CUCPHT Cucurbita pepo (zucchini) phytochrome mRNA, complete cds
          Length = 3574

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 476  gtctccattcatcagcttca 495
            ||||||||||||||||||||
Sbjct: 3434 gtctccattcatcagcttca 3415


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,510,808
Number of Sequences: 3902068
Number of extensions: 4510808
Number of successful extensions: 84194
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84017
Number of HSP's gapped (non-prelim): 168
length of query: 563
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 540
effective length of database: 17,143,297,704
effective search space: 9257380760160
effective search space used: 9257380760160
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top