ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags26m22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DNAJ_PICTO (Q6L0S6) Chaperone protein dnaJ 30 6.0
2FYV1_DROME (O96838) Putative FYVE finger-containing phosphoinosi... 29 7.9

>DNAJ_PICTO (Q6L0S6) Chaperone protein dnaJ|
          Length = 357

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 297 GEVGSLYLDLVXPRPKGIRTAKQDIY 374
           G  G LY+ L+   P GIR + QDIY
Sbjct: 241 GVTGDLYIVLIVNNPPGIRRSGQDIY 266



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>FYV1_DROME (O96838) Putative FYVE finger-containing phosphoinositide kinase (EC|
            2.7.1.68) (1-phosphatidylinositol-4-phosphate 5-kinase)
            (PIP5K) (PtdIns(4)P-5-kinase)
          Length = 1809

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = -3

Query: 125  RYLKSLDSTCFQREMRCK---VHAPFVPKYLSQ*QFCKRSSQP 6
            R+ K+LD     +EM  +   +  PF PKY      C++  QP
Sbjct: 1581 RFCKTLDDRFVLKEMNSRDMTIFEPFAPKYFEYIDRCQQQQQP 1623


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,677,917
Number of Sequences: 219361
Number of extensions: 1508163
Number of successful extensions: 3077
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3077
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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