ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal1g05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_549890.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1959 Score = 345 bits (174), Expect = 1e-91 Identities = 360/422 (85%) Strand = Plus / Minus Query: 219 gacattttaggccttcttttgcaatcaatttgcaaacaccacattgcgagcttcatcatc 278 ||||||| |||||| ||||||||||| || ||||||||||||||||| | ||||||||| Sbjct: 1811 gacatttgaggcctccttttgcaatcgatctgcaaacaccacattgcaaatttcatcatc 1752 Query: 279 tcaattacatcctgcttgtgtgctagcatgtcattactgttcttgtcaatcaaatctacc 338 || ||||| || |||| |||| || ||||||||||| | | |||||||||||||||||| Sbjct: 1751 tctattacttcttgctcgtgtacttgcatgtcattattatctttgtcaatcaaatctacc 1692 Query: 339 aagtgagcattcttcaccttttcttccaacagggtgataagatggatgctctcttctgat 398 || ||| || ||||||||||||||| ||| | ||| || ||||||||||||| ||| || Sbjct: 1691 aactgatcactcttcaccttttcttgcaataaggtaattagatggatgctctgttcagac 1632 Query: 399 agagaagtgtcgaggttctttcttccgcagatgacttccatgaccacaacaccaaagcta 458 | |||||||| | ||||||||||||| ||||| ||||||||| || | ||||||||| Sbjct: 1631 cgggaagtgtcaacattctttcttccgctgatgatttccatgactactatgccaaagcta 1572 Query: 459 tagacatcggccttttctgtgatttgtgatgttaaccattcaggagctaaatatccaggc 518 |||||||| |||||||||||||| || ||||| | |||||||||||||||||||||||| Sbjct: 1571 tagacatctgccttttctgtgatctgcgatgtcagccattcaggagctaaatatccaggt 1512 Query: 519 gtgcctcgcattttggtaaccacttggctcatatccctgtcaatgagcttgcatagtcca 578 ||||||| |||| | |||| |||||||||| |||| | ||||||||||||||||||||| Sbjct: 1511 gtgcctctcattcttgtaatcacttggctcttatctcgatcaatgagcttgcatagtcca 1452 Query: 579 aaatcagaaagcttagcattgaagtcatcatctaagaggatgttttgtggtttgacatcc 638 |||||||| || ||||||||||| | ||||| | |||||| ||||||||||| |||||| Sbjct: 1451 aaatcagagagtttagcattgaatttgtcatccaggaggatattttgtggttttacatcc 1392 Query: 639 aa 640 || Sbjct: 1391 aa 1390
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 345 bits (174), Expect = 1e-91 Identities = 360/422 (85%) Strand = Plus / Minus Query: 219 gacattttaggccttcttttgcaatcaatttgcaaacaccacattgcgagcttcatcatc 278 ||||||| |||||| ||||||||||| || ||||||||||||||||| | ||||||||| Sbjct: 729778 gacatttgaggcctccttttgcaatcgatctgcaaacaccacattgcaaatttcatcatc 729719 Query: 279 tcaattacatcctgcttgtgtgctagcatgtcattactgttcttgtcaatcaaatctacc 338 || ||||| || |||| |||| || ||||||||||| | | |||||||||||||||||| Sbjct: 729718 tctattacttcttgctcgtgtacttgcatgtcattattatctttgtcaatcaaatctacc 729659 Query: 339 aagtgagcattcttcaccttttcttccaacagggtgataagatggatgctctcttctgat 398 || ||| || ||||||||||||||| ||| | ||| || ||||||||||||| ||| || Sbjct: 729658 aactgatcactcttcaccttttcttgcaataaggtaattagatggatgctctgttcagac 729599 Query: 399 agagaagtgtcgaggttctttcttccgcagatgacttccatgaccacaacaccaaagcta 458 | |||||||| | ||||||||||||| ||||| ||||||||| || | ||||||||| Sbjct: 729598 cgggaagtgtcaacattctttcttccgctgatgatttccatgactactatgccaaagcta 729539 Query: 459 tagacatcggccttttctgtgatttgtgatgttaaccattcaggagctaaatatccaggc 518 |||||||| |||||||||||||| || ||||| | |||||||||||||||||||||||| Sbjct: 729538 tagacatctgccttttctgtgatctgcgatgtcagccattcaggagctaaatatccaggt 729479 Query: 519 gtgcctcgcattttggtaaccacttggctcatatccctgtcaatgagcttgcatagtcca 578 ||||||| |||| | |||| |||||||||| |||| | ||||||||||||||||||||| Sbjct: 729478 gtgcctctcattcttgtaatcacttggctcttatctcgatcaatgagcttgcatagtcca 729419 Query: 579 aaatcagaaagcttagcattgaagtcatcatctaagaggatgttttgtggtttgacatcc 638 |||||||| || ||||||||||| | ||||| | |||||| ||||||||||| |||||| Sbjct: 729418 aaatcagagagtttagcattgaatttgtcatccaggaggatattttgtggttttacatcc 729359 Query: 639 aa 640 || Sbjct: 729358 aa 729357 Score = 317 bits (160), Expect = 3e-83 Identities = 376/448 (83%) Strand = Plus / Minus Query: 190 tggtaccttccaagaccttaactacgtcggacattttaggccttcttttgcaatcaattt 249 |||| |||||||| || || || || || ||||||| ||||||||||||||||||||| | Sbjct: 739779 tggtgccttccaaaactttgacaacctcagacatttgaggccttcttttgcaatcaatct 739720 Query: 250 gcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgctagcatgt 309 ||||||||||||||||||| |||||||||||||||| || ||| |||| || |||| | Sbjct: 739719 gcaaacaccacattgcgagtttcatcatctcaattatttcttgccggtgtacttgcatat 739660 Query: 310 cattactgttcttgtcaatcaaatctaccaagtgagcattcttcaccttttcttccaaca 369 |||| |||| |||||||||||||||| |||| ||| || |||||||||||||| || | Sbjct: 739659 cattgctgtgcttgtcaatcaaatctgccaactgatcacccttcaccttttcttgcagta 739600 Query: 370 gggtgataagatggatgctctcttctgatagagaagtgtcgaggttctttcttccgcaga 429 ||| || |||||||| |||| ||| || |||||||| ||||||||||| || | || Sbjct: 739599 aggtaattagatggatactctgttcagacctggaagtgtcaaggttctttctcccactga 739540 Query: 430 tgacttccatgaccacaacaccaaagctatagacatcggccttttctgtgatttgtgatg 489 | | ||||||||| || | ||||||||||||||||| |||||||||||||| || |||| Sbjct: 739539 tcatttccatgactactatgccaaagctatagacatctgccttttctgtgatctgcgatg 739480 Query: 490 ttaaccattcaggagctaaatatccaggcgtgcctcgcattttggtaaccacttggctca 549 | | |||||| ||||||||||||||||| ||||||| |||| |||||| |||||| ||| Sbjct: 739479 tcagccattctggagctaaatatccaggtgtgcctctcattctggtaatcacttgactct 739420 Query: 550 tatccctgtcaatgagcttgcatagtccaaaatcagaaagcttagcattgaagtcatcat 609 |||| | ||||| ||||||||||| |||||||||||||| ||||||||||||| || | Sbjct: 739419 tatctcgatcaataagcttgcatagaccaaaatcagaaagtttagcattgaagttgtcgt 739360 Query: 610 ctaagaggatgttttgtggtttgacatc 637 ||| |||||| ||||||||||| ||||| Sbjct: 739359 ctaggaggatattttgtggttttacatc 739332 Score = 109 bits (55), Expect = 1e-20 Identities = 178/219 (81%) Strand = Plus / Minus Query: 413 gttctttcttccgcagatgacttccatgaccacaacaccaaagctatagacatcggcctt 472 |||||||||||| | ||||| ||||||||||||||||||||||||||| ||||| |||| Sbjct: 5732975 gttctttcttccactgatgatttccatgaccacaacaccaaagctatatacatcaacctt 5732916 Query: 473 ttctgtgatttgtgatgttaaccattcaggagctaaatatccaggcgtgcctcgcatttt 532 |||||||||||||| || | ||||||||| || | |||||||| || ||| |||| | Sbjct: 5732915 ctctgtgatttgtgaagtcagccattcaggtgccatgtatccaggtgtccctttcattct 5732856 Query: 533 ggtaaccacttggctcatatccctgtcaatgagcttgcatagtccaaaatcagaaagctt 592 || || |||| ||| || ||||| || || ||||| |||| ||||| |||| || || Sbjct: 5732855 tgtcacaactttgcttatctccctctcgatcagctttgatagaccaaagtcagcaacttt 5732796 Query: 593 agcattgaagtcatcatctaagaggatgttttgtggttt 631 ||||||||| ||||||||||| ||||| |||||||| Sbjct: 5732795 cgcattgaagctgtcatctaagagaatgttatgtggttt 5732757 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 575 tccaaaatcagaaagcttagcattgaagtcatcatctaagaggatgttttgtggtttgac 634 |||||||||| ||| || |||||||||| ||||||||||||||| ||||||||||||| Sbjct: 5728312 tccaaaatcacaaactttggcattgaagttatcatctaagaggatattttgtggtttgat 5728253 Query: 635 atcca 639 ||||| Sbjct: 5728252 atcca 5728248 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 227 aggccttcttttgcaatcaatttgcaaacaccacattgcgagcttcatcatctcaattac 286 ||||||||| ||||||||| | ||||| ||||||||||| |||||||| |||| || || Sbjct: 5728660 aggccttctgttgcaatcactctgcaagcaccacattgcaagcttcattatctttatcac 5728601 Query: 287 atcctg 292 |||||| Sbjct: 5728600 atcctg 5728595 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagg 502 |||||| ||| | ||||||||||| |||| || ||||| || ||||||||||||||||| Sbjct: 5728444 cacaactccataactatagacatcaaccttctcggtgatatgagatgttaaccattcagg 5728385 Query: 503 agctaaatatccaggcgtgcctcgcattttggt 535 | ||||||||||| || |||| |||| |||| Sbjct: 5728384 ggacaaatatccaggtgttcctctcattctggt 5728352 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 249 tgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgt 299 |||||||||||||| || |||||||||| |||||| || |||| ||||||| Sbjct: 5733139 tgcaaacaccacatggcaagcttcatcacctcaatcacttcctccttgtgt 5733089 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagacatcgg 468 ||||||||||||||||||||||||| Sbjct: 41090784 acaacaccaaagctatagacatcgg 41090760 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 447 acaccaaagctatagacatcgg 468 |||||||||||||||||||||| Sbjct: 33224563 acaccaaagctatagacatcgg 33224542 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 447 acaccaaagctatagacatcggcctt 472 |||||||||||||||||||| ||||| Sbjct: 6781259 acaccaaagctatagacatctgcctt 6781284 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 cacaacaccaaagctatagacatc 466 |||||||||||||||||| ||||| Sbjct: 1957524 cacaacaccaaagctatacacatc 1957547
>dbj|AP003338.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1212_B09 Length = 130728 Score = 345 bits (174), Expect = 1e-91 Identities = 360/422 (85%) Strand = Plus / Minus Query: 219 gacattttaggccttcttttgcaatcaatttgcaaacaccacattgcgagcttcatcatc 278 ||||||| |||||| ||||||||||| || ||||||||||||||||| | ||||||||| Sbjct: 6978 gacatttgaggcctccttttgcaatcgatctgcaaacaccacattgcaaatttcatcatc 6919 Query: 279 tcaattacatcctgcttgtgtgctagcatgtcattactgttcttgtcaatcaaatctacc 338 || ||||| || |||| |||| || ||||||||||| | | |||||||||||||||||| Sbjct: 6918 tctattacttcttgctcgtgtacttgcatgtcattattatctttgtcaatcaaatctacc 6859 Query: 339 aagtgagcattcttcaccttttcttccaacagggtgataagatggatgctctcttctgat 398 || ||| || ||||||||||||||| ||| | ||| || ||||||||||||| ||| || Sbjct: 6858 aactgatcactcttcaccttttcttgcaataaggtaattagatggatgctctgttcagac 6799 Query: 399 agagaagtgtcgaggttctttcttccgcagatgacttccatgaccacaacaccaaagcta 458 | |||||||| | ||||||||||||| ||||| ||||||||| || | ||||||||| Sbjct: 6798 cgggaagtgtcaacattctttcttccgctgatgatttccatgactactatgccaaagcta 6739 Query: 459 tagacatcggccttttctgtgatttgtgatgttaaccattcaggagctaaatatccaggc 518 |||||||| |||||||||||||| || ||||| | |||||||||||||||||||||||| Sbjct: 6738 tagacatctgccttttctgtgatctgcgatgtcagccattcaggagctaaatatccaggt 6679 Query: 519 gtgcctcgcattttggtaaccacttggctcatatccctgtcaatgagcttgcatagtcca 578 ||||||| |||| | |||| |||||||||| |||| | ||||||||||||||||||||| Sbjct: 6678 gtgcctctcattcttgtaatcacttggctcttatctcgatcaatgagcttgcatagtcca 6619 Query: 579 aaatcagaaagcttagcattgaagtcatcatctaagaggatgttttgtggtttgacatcc 638 |||||||| || ||||||||||| | ||||| | |||||| ||||||||||| |||||| Sbjct: 6618 aaatcagagagtttagcattgaatttgtcatccaggaggatattttgtggttttacatcc 6559 Query: 639 aa 640 || Sbjct: 6558 aa 6557 Score = 317 bits (160), Expect = 3e-83 Identities = 376/448 (83%) Strand = Plus / Minus Query: 190 tggtaccttccaagaccttaactacgtcggacattttaggccttcttttgcaatcaattt 249 |||| |||||||| || || || || || ||||||| ||||||||||||||||||||| | Sbjct: 16979 tggtgccttccaaaactttgacaacctcagacatttgaggccttcttttgcaatcaatct 16920 Query: 250 gcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgctagcatgt 309 ||||||||||||||||||| |||||||||||||||| || ||| |||| || |||| | Sbjct: 16919 gcaaacaccacattgcgagtttcatcatctcaattatttcttgccggtgtacttgcatat 16860 Query: 310 cattactgttcttgtcaatcaaatctaccaagtgagcattcttcaccttttcttccaaca 369 |||| |||| |||||||||||||||| |||| ||| || |||||||||||||| || | Sbjct: 16859 cattgctgtgcttgtcaatcaaatctgccaactgatcacccttcaccttttcttgcagta 16800 Query: 370 gggtgataagatggatgctctcttctgatagagaagtgtcgaggttctttcttccgcaga 429 ||| || |||||||| |||| ||| || |||||||| ||||||||||| || | || Sbjct: 16799 aggtaattagatggatactctgttcagacctggaagtgtcaaggttctttctcccactga 16740 Query: 430 tgacttccatgaccacaacaccaaagctatagacatcggccttttctgtgatttgtgatg 489 | | ||||||||| || | ||||||||||||||||| |||||||||||||| || |||| Sbjct: 16739 tcatttccatgactactatgccaaagctatagacatctgccttttctgtgatctgcgatg 16680 Query: 490 ttaaccattcaggagctaaatatccaggcgtgcctcgcattttggtaaccacttggctca 549 | | |||||| ||||||||||||||||| ||||||| |||| |||||| |||||| ||| Sbjct: 16679 tcagccattctggagctaaatatccaggtgtgcctctcattctggtaatcacttgactct 16620 Query: 550 tatccctgtcaatgagcttgcatagtccaaaatcagaaagcttagcattgaagtcatcat 609 |||| | ||||| ||||||||||| |||||||||||||| ||||||||||||| || | Sbjct: 16619 tatctcgatcaataagcttgcatagaccaaaatcagaaagtttagcattgaagttgtcgt 16560 Query: 610 ctaagaggatgttttgtggtttgacatc 637 ||| |||||| ||||||||||| ||||| Sbjct: 16559 ctaggaggatattttgtggttttacatc 16532
>dbj|AP003219.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032H19 Length = 126434 Score = 345 bits (174), Expect = 1e-91 Identities = 360/422 (85%) Strand = Plus / Minus Query: 219 gacattttaggccttcttttgcaatcaatttgcaaacaccacattgcgagcttcatcatc 278 ||||||| |||||| ||||||||||| || ||||||||||||||||| | ||||||||| Sbjct: 113522 gacatttgaggcctccttttgcaatcgatctgcaaacaccacattgcaaatttcatcatc 113463 Query: 279 tcaattacatcctgcttgtgtgctagcatgtcattactgttcttgtcaatcaaatctacc 338 || ||||| || |||| |||| || ||||||||||| | | |||||||||||||||||| Sbjct: 113462 tctattacttcttgctcgtgtacttgcatgtcattattatctttgtcaatcaaatctacc 113403 Query: 339 aagtgagcattcttcaccttttcttccaacagggtgataagatggatgctctcttctgat 398 || ||| || ||||||||||||||| ||| | ||| || ||||||||||||| ||| || Sbjct: 113402 aactgatcactcttcaccttttcttgcaataaggtaattagatggatgctctgttcagac 113343 Query: 399 agagaagtgtcgaggttctttcttccgcagatgacttccatgaccacaacaccaaagcta 458 | |||||||| | ||||||||||||| ||||| ||||||||| || | ||||||||| Sbjct: 113342 cgggaagtgtcaacattctttcttccgctgatgatttccatgactactatgccaaagcta 113283 Query: 459 tagacatcggccttttctgtgatttgtgatgttaaccattcaggagctaaatatccaggc 518 |||||||| |||||||||||||| || ||||| | |||||||||||||||||||||||| Sbjct: 113282 tagacatctgccttttctgtgatctgcgatgtcagccattcaggagctaaatatccaggt 113223 Query: 519 gtgcctcgcattttggtaaccacttggctcatatccctgtcaatgagcttgcatagtcca 578 ||||||| |||| | |||| |||||||||| |||| | ||||||||||||||||||||| Sbjct: 113222 gtgcctctcattcttgtaatcacttggctcttatctcgatcaatgagcttgcatagtcca 113163 Query: 579 aaatcagaaagcttagcattgaagtcatcatctaagaggatgttttgtggtttgacatcc 638 |||||||| || ||||||||||| | ||||| | |||||| ||||||||||| |||||| Sbjct: 113162 aaatcagagagtttagcattgaatttgtcatccaggaggatattttgtggttttacatcc 113103 Query: 639 aa 640 || Sbjct: 113102 aa 113101 Score = 317 bits (160), Expect = 3e-83 Identities = 376/448 (83%) Strand = Plus / Minus Query: 190 tggtaccttccaagaccttaactacgtcggacattttaggccttcttttgcaatcaattt 249 |||| |||||||| || || || || || ||||||| ||||||||||||||||||||| | Sbjct: 123523 tggtgccttccaaaactttgacaacctcagacatttgaggccttcttttgcaatcaatct 123464 Query: 250 gcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgctagcatgt 309 ||||||||||||||||||| |||||||||||||||| || ||| |||| || |||| | Sbjct: 123463 gcaaacaccacattgcgagtttcatcatctcaattatttcttgccggtgtacttgcatat 123404 Query: 310 cattactgttcttgtcaatcaaatctaccaagtgagcattcttcaccttttcttccaaca 369 |||| |||| |||||||||||||||| |||| ||| || |||||||||||||| || | Sbjct: 123403 cattgctgtgcttgtcaatcaaatctgccaactgatcacccttcaccttttcttgcagta 123344 Query: 370 gggtgataagatggatgctctcttctgatagagaagtgtcgaggttctttcttccgcaga 429 ||| || |||||||| |||| ||| || |||||||| ||||||||||| || | || Sbjct: 123343 aggtaattagatggatactctgttcagacctggaagtgtcaaggttctttctcccactga 123284 Query: 430 tgacttccatgaccacaacaccaaagctatagacatcggccttttctgtgatttgtgatg 489 | | ||||||||| || | ||||||||||||||||| |||||||||||||| || |||| Sbjct: 123283 tcatttccatgactactatgccaaagctatagacatctgccttttctgtgatctgcgatg 123224 Query: 490 ttaaccattcaggagctaaatatccaggcgtgcctcgcattttggtaaccacttggctca 549 | | |||||| ||||||||||||||||| ||||||| |||| |||||| |||||| ||| Sbjct: 123223 tcagccattctggagctaaatatccaggtgtgcctctcattctggtaatcacttgactct 123164 Query: 550 tatccctgtcaatgagcttgcatagtccaaaatcagaaagcttagcattgaagtcatcat 609 |||| | ||||| ||||||||||| |||||||||||||| ||||||||||||| || | Sbjct: 123163 tatctcgatcaataagcttgcatagaccaaaatcagaaagtttagcattgaagttgtcgt 123104 Query: 610 ctaagaggatgttttgtggtttgacatc 637 ||| |||||| ||||||||||| ||||| Sbjct: 123103 ctaggaggatattttgtggttttacatc 123076
>ref|XM_549893.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1806 Score = 317 bits (160), Expect = 3e-83 Identities = 376/448 (83%) Strand = Plus / Minus Query: 190 tggtaccttccaagaccttaactacgtcggacattttaggccttcttttgcaatcaattt 249 |||| |||||||| || || || || || ||||||| ||||||||||||||||||||| | Sbjct: 1687 tggtgccttccaaaactttgacaacctcagacatttgaggccttcttttgcaatcaatct 1628 Query: 250 gcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgctagcatgt 309 ||||||||||||||||||| |||||||||||||||| || ||| |||| || |||| | Sbjct: 1627 gcaaacaccacattgcgagtttcatcatctcaattatttcttgccggtgtacttgcatat 1568 Query: 310 cattactgttcttgtcaatcaaatctaccaagtgagcattcttcaccttttcttccaaca 369 |||| |||| |||||||||||||||| |||| ||| || |||||||||||||| || | Sbjct: 1567 cattgctgtgcttgtcaatcaaatctgccaactgatcacccttcaccttttcttgcagta 1508 Query: 370 gggtgataagatggatgctctcttctgatagagaagtgtcgaggttctttcttccgcaga 429 ||| || |||||||| |||| ||| || |||||||| ||||||||||| || | || Sbjct: 1507 aggtaattagatggatactctgttcagacctggaagtgtcaaggttctttctcccactga 1448 Query: 430 tgacttccatgaccacaacaccaaagctatagacatcggccttttctgtgatttgtgatg 489 | | ||||||||| || | ||||||||||||||||| |||||||||||||| || |||| Sbjct: 1447 tcatttccatgactactatgccaaagctatagacatctgccttttctgtgatctgcgatg 1388 Query: 490 ttaaccattcaggagctaaatatccaggcgtgcctcgcattttggtaaccacttggctca 549 | | |||||| ||||||||||||||||| ||||||| |||| |||||| |||||| ||| Sbjct: 1387 tcagccattctggagctaaatatccaggtgtgcctctcattctggtaatcacttgactct 1328 Query: 550 tatccctgtcaatgagcttgcatagtccaaaatcagaaagcttagcattgaagtcatcat 609 |||| | ||||| ||||||||||| |||||||||||||| ||||||||||||| || | Sbjct: 1327 tatctcgatcaataagcttgcatagaccaaaatcagaaagtttagcattgaagttgtcgt 1268 Query: 610 ctaagaggatgttttgtggtttgacatc 637 ||| |||||| ||||||||||| ||||| Sbjct: 1267 ctaggaggatattttgtggttttacatc 1240
>dbj|AK106707.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-E12, full insert sequence Length = 2110 Score = 198 bits (100), Expect = 2e-47 Identities = 202/236 (85%) Strand = Plus / Plus Query: 402 gaagtgtcgaggttctttcttccgcagatgacttccatgaccacaacaccaaagctatag 461 |||||||| ||||||||||| || | ||| | ||||||||| || | |||||||||||| Sbjct: 292 gaagtgtcaaggttctttctcccactgatcatttccatgactactatgccaaagctatag 351 Query: 462 acatcggccttttctgtgatttgtgatgttaaccattcaggagctaaatatccaggcgtg 521 ||||| |||||||||||||| || ||||| | |||||| ||||||||||||||||| ||| Sbjct: 352 acatctgccttttctgtgatctgcgatgtcagccattctggagctaaatatccaggtgtg 411 Query: 522 cctcgcattttggtaaccacttggctcatatccctgtcaatgagcttgcatagtccaaaa 581 |||| |||| |||||| |||||| ||| |||| | ||||| ||||||||||| |||||| Sbjct: 412 cctctcattctggtaatcacttgactcttatctcgatcaataagcttgcatagaccaaaa 471 Query: 582 tcagaaagcttagcattgaagtcatcatctaagaggatgttttgtggtttgacatc 637 |||||||| ||||||||||||| || |||| |||||| ||||||||||| ||||| Sbjct: 472 tcagaaagtttagcattgaagttgtcgtctaggaggatattttgtggttttacatc 527
>gb|AY108371.1| Zea mays PCO102047 mRNA sequence Length = 738 Score = 182 bits (92), Expect = 1e-42 Identities = 227/272 (83%) Strand = Plus / Plus Query: 324 tcaatcaaatctaccaagtgagcattcttcaccttttcttccaacagggtgataagatgg 383 |||||||||||||||||| || || || ||| ||| || || | || ||| ||||| || Sbjct: 460 tcaatcaaatctaccaagcgatcactcctcaacttctcctctagcaaggtaataaggtga 519 Query: 384 atgctctcttctgatagagaagtgtcgaggttctttcttccgcagatgacttccatgacc 443 | ||||| ||| || |||||||||| |||||||| ||||| | ||||| ||||| || Sbjct: 520 aagctcttttcagaccgagaagtgtccaggttcttccttccactgatgatctccatcaca 579 Query: 444 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 503 || || ||||||||||| ||||| |||||||| ||||| || || || |||||||| ||| Sbjct: 580 accacgccaaagctatatacatcagccttttcagtgatgtgcgacgtcaaccattctgga 639 Query: 504 gctaaatatccaggcgtgcctcgcattttggtaaccacttggctcatatccctgtcaatg 563 |||| ||||||||||||||||| |||| | ||||||||||||||| |||||| ||| ||| Sbjct: 640 gctagatatccaggcgtgcctctcattctagtaaccacttggctcttatcccggtcgatg 699 Query: 564 agcttgcatagtccaaaatcagaaagcttagc 595 |||||||| |||||||||||||| |||||||| Sbjct: 700 agcttgcagagtccaaaatcagagagcttagc 731 Score = 115 bits (58), Expect = 2e-22 Identities = 82/90 (91%) Strand = Plus / Plus Query: 195 ccttccaagaccttaactacgtcggacattttaggccttcttttgcaatcaatttgcaaa 254 ||||||||||| || || || ||||||||||| ||||||| |||||||||||| |||||| Sbjct: 328 ccttccaagacttttacgacctcggacattttgggccttcgtttgcaatcaatctgcaaa 387 Query: 255 caccacattgcgagcttcatcatctcaatt 284 ||||||||||||||||||||||||| |||| Sbjct: 388 caccacattgcgagcttcatcatctgaatt 417 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 65 atttcacctggggcctgatacatgtgaagctagaggtggaactga 109 ||||||||| |||||||| || | |||||||||||||||| |||| Sbjct: 198 atttcaccttgggcctgacacttctgaagctagaggtggagctga 242
>dbj|AK110685.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-H09, full insert sequence Length = 664 Score = 113 bits (57), Expect = 7e-22 Identities = 111/129 (86%) Strand = Plus / Plus Query: 402 gaagtgtcgaggttctttcttccgcagatgacttccatgaccacaacaccaaagctatag 461 |||||||| ||||||||||| || | ||| | ||||||||| || | |||||||||||| Sbjct: 327 gaagtgtcaaggttctttctcccactgatcatttccatgactactatgccaaagctatag 386 Query: 462 acatcggccttttctgtgatttgtgatgttaaccattcaggagctaaatatccaggcgtg 521 ||||| |||||||||||||| || ||||| | |||||| ||||||||||||||||| ||| Sbjct: 387 acatctgccttttctgtgatctgcgatgtcagccattctggagctaaatatccaggtgtg 446 Query: 522 cctcgcatt 530 |||| |||| Sbjct: 447 cctctcatt 455
>ref|NM_188330.1| Oryza sativa (japonica cultivar-group), Ozsa8081 predicted mRNA Length = 2538 Score = 109 bits (55), Expect = 1e-20 Identities = 178/219 (81%) Strand = Plus / Minus Query: 413 gttctttcttccgcagatgacttccatgaccacaacaccaaagctatagacatcggcctt 472 |||||||||||| | ||||| ||||||||||||||||||||||||||| ||||| |||| Sbjct: 2193 gttctttcttccactgatgatttccatgaccacaacaccaaagctatatacatcaacctt 2134 Query: 473 ttctgtgatttgtgatgttaaccattcaggagctaaatatccaggcgtgcctcgcatttt 532 |||||||||||||| || | ||||||||| || | |||||||| || ||| |||| | Sbjct: 2133 ctctgtgatttgtgaagtcagccattcaggtgccatgtatccaggtgtccctttcattct 2074 Query: 533 ggtaaccacttggctcatatccctgtcaatgagcttgcatagtccaaaatcagaaagctt 592 || || |||| ||| || ||||| || || ||||| |||| ||||| |||| || || Sbjct: 2073 tgtcacaactttgcttatctccctctcgatcagctttgatagaccaaagtcagcaacttt 2014 Query: 593 agcattgaagtcatcatctaagaggatgttttgtggttt 631 ||||||||| ||||||||||| ||||| |||||||| Sbjct: 2013 cgcattgaagctgtcatctaagagaatgttatgtggttt 1975 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 249 tgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgt 299 |||||||||||||| || |||||||||| |||||| || |||| ||||||| Sbjct: 2357 tgcaaacaccacatggcaagcttcatcacctcaatcacttcctccttgtgt 2307
>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451C06 Length = 151773 Score = 109 bits (55), Expect = 1e-20 Identities = 178/219 (81%) Strand = Plus / Minus Query: 413 gttctttcttccgcagatgacttccatgaccacaacaccaaagctatagacatcggcctt 472 |||||||||||| | ||||| ||||||||||||||||||||||||||| ||||| |||| Sbjct: 57677 gttctttcttccactgatgatttccatgaccacaacaccaaagctatatacatcaacctt 57618 Query: 473 ttctgtgatttgtgatgttaaccattcaggagctaaatatccaggcgtgcctcgcatttt 532 |||||||||||||| || | ||||||||| || | |||||||| || ||| |||| | Sbjct: 57617 ctctgtgatttgtgaagtcagccattcaggtgccatgtatccaggtgtccctttcattct 57558 Query: 533 ggtaaccacttggctcatatccctgtcaatgagcttgcatagtccaaaatcagaaagctt 592 || || |||| ||| || ||||| || || ||||| |||| ||||| |||| || || Sbjct: 57557 tgtcacaactttgcttatctccctctcgatcagctttgatagaccaaagtcagcaacttt 57498 Query: 593 agcattgaagtcatcatctaagaggatgttttgtggttt 631 ||||||||| ||||||||||| ||||| |||||||| Sbjct: 57497 cgcattgaagctgtcatctaagagaatgttatgtggttt 57459 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 575 tccaaaatcagaaagcttagcattgaagtcatcatctaagaggatgttttgtggtttgac 634 |||||||||| ||| || |||||||||| ||||||||||||||| ||||||||||||| Sbjct: 53014 tccaaaatcacaaactttggcattgaagttatcatctaagaggatattttgtggtttgat 52955 Query: 635 atcca 639 ||||| Sbjct: 52954 atcca 52950 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 227 aggccttcttttgcaatcaatttgcaaacaccacattgcgagcttcatcatctcaattac 286 ||||||||| ||||||||| | ||||| ||||||||||| |||||||| |||| || || Sbjct: 53362 aggccttctgttgcaatcactctgcaagcaccacattgcaagcttcattatctttatcac 53303 Query: 287 atcctg 292 |||||| Sbjct: 53302 atcctg 53297 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagg 502 |||||| ||| | ||||||||||| |||| || ||||| || ||||||||||||||||| Sbjct: 53146 cacaactccataactatagacatcaaccttctcggtgatatgagatgttaaccattcagg 53087 Query: 503 agctaaatatccaggcgtgcctcgcattttggt 535 | ||||||||||| || |||| |||| |||| Sbjct: 53086 ggacaaatatccaggtgttcctctcattctggt 53054 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 249 tgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgt 299 |||||||||||||| || |||||||||| |||||| || |||| ||||||| Sbjct: 57841 tgcaaacaccacatggcaagcttcatcacctcaatcacttcctccttgtgt 57791
>ref|XM_471711.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2517 Score = 103 bits (52), Expect = 7e-19 Identities = 163/200 (81%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 503 ||||| |||||||| ||||| || | ||||| ||||| |||||||||| ||||||||| Sbjct: 2138 acaactccaaagctgtagacgtcaactttttcagtgatctgtgatgttagccattcaggt 2079 Query: 504 gctaaatatccaggcgtgcctcgcattttggtaaccacttggctcatatccctgtcaatg 563 || ||||||||||||||||||| ||| || || |||| || ||||||||| || Sbjct: 2078 gccaaatatccaggcgtgcctctcatcacagtcactactttactttgatccctgtctatt 2019 Query: 564 agcttgcatagtccaaaatcagaaagcttagcattgaagtcatcatctaagaggatgttt 623 |||||| | ||||||||||||| || || |||||||| | || |||||||| |||||| Sbjct: 2018 agcttggaaagtccaaaatcagccagtttggcattgaatttctcgtctaagagaatgttt 1959 Query: 624 tgtggtttgacatccaaatg 643 |||||||||| ||||||||| Sbjct: 1958 tgtggtttgatatccaaatg 1939 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 247 tttgcaaacaccacattgcgagcttca 273 ||||||| ||||||||||||||||||| Sbjct: 2338 tttgcaagcaccacattgcgagcttca 2312
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 103 bits (52), Expect = 7e-19 Identities = 163/200 (81%) Strand = Plus / Plus Query: 444 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 503 ||||| |||||||| ||||| || | ||||| ||||| |||||||||| ||||||||| Sbjct: 13639195 acaactccaaagctgtagacgtcaactttttcagtgatctgtgatgttagccattcaggt 13639254 Query: 504 gctaaatatccaggcgtgcctcgcattttggtaaccacttggctcatatccctgtcaatg 563 || ||||||||||||||||||| ||| || || |||| || ||||||||| || Sbjct: 13639255 gccaaatatccaggcgtgcctctcatcacagtcactactttactttgatccctgtctatt 13639314 Query: 564 agcttgcatagtccaaaatcagaaagcttagcattgaagtcatcatctaagaggatgttt 623 |||||| | ||||||||||||| || || |||||||| | || |||||||| |||||| Sbjct: 13639315 agcttggaaagtccaaaatcagccagtttggcattgaatttctcgtctaagagaatgttt 13639374 Query: 624 tgtggtttgacatccaaatg 643 |||||||||| ||||||||| Sbjct: 13639375 tgtggtttgatatccaaatg 13639394 Score = 79.8 bits (40), Expect = 1e-11 Identities = 160/200 (80%) Strand = Plus / Plus Query: 444 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 503 ||||| |||||||| ||||| || | ||||| ||||| |||||||||| ||||||||| Sbjct: 13619708 acaactccaaagctgtagacgtcaactttttcagtgatctgtgatgttagccattcaggt 13619767 Query: 504 gctaaatatccaggcgtgcctcgcattttggtaaccacttggctcatatccctgtcaatg 563 || | ||||||||| ||||||| ||| ||| || |||| || ||||||||| || Sbjct: 13619768 gccagatatccaggtgtgcctctcatcacggtcactactttactttgatccctgtctatt 13619827 Query: 564 agcttgcatagtccaaaatcagaaagcttagcattgaagtcatcatctaagaggatgttt 623 || ||| | ||||||||||||| || || |||||||| | || |||||||| || ||| Sbjct: 13619828 agtttggaaagtccaaaatcagccagtttggcattgaatttctcgtctaagagaatattt 13619887 Query: 624 tgtggtttgacatccaaatg 643 |||||||||| ||||||||| Sbjct: 13619888 tgtggtttgatatccaaatg 13619907 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 444 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 503 ||||| |||||||| || ||||| | ||||| |||||||||||||||||||||||||| Sbjct: 13580772 acaacgccaaagctgtacacatcaactttttcagtgatttgtgatgttaaccattcaggt 13580831 Query: 504 gctaaatatccaggcgtgcctc 525 || | ||||||||| ||||||| Sbjct: 13580832 gccagatatccaggtgtgcctc 13580853 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 242 atcaatttgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgc 301 |||| ||||||| ||||||||||| ||||||||||| | ||| || |||| || ||||| Sbjct: 13564244 atcattttgcaagcaccacattgcaagcttcatcatttgaatcacttcctcctggtgtga 13564303 Query: 302 tagcatgtcattactgttcttgtcaatca 330 | |||||||||||||| ||||||||||| Sbjct: 13564304 gaccatgtcattactgtgcttgtcaatca 13564332 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 444 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 503 ||||| || ||||| |||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 13574119 acaacgccgaagctgtagacatcaactttttcagtgatttgtgatgttaaccattcaggt 13574178 Query: 504 gctaaatatccaggcgtgcctc 525 || | |||||| || ||||||| Sbjct: 13574179 gccagatatcctggtgtgcctc 13574200 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 471 ttttctgtgatttgtgatgttaaccattcaggagctaaatatccaggcgtgcctc 525 ||||| |||||||| ||||||||||||||||| || | ||||||||| ||||||| Sbjct: 13564472 ttttcagtgatttgcgatgttaaccattcaggtgccagatatccaggtgtgcctc 13564526 Score = 60.0 bits (30), Expect = 1e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 249 tgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgctagcatg 308 ||||| ||||||||||| ||||||||||| | ||| || |||| || ||||| | |||| Sbjct: 13605376 tgcaagcaccacattgcaagcttcatcatttgaatcacttcctcctggtgtgacaccatg 13605435 Query: 309 tcattactgttcttgtcaatca 330 |||||||||| ||| ||||||| Sbjct: 13605436 tcattactgtgcttatcaatca 13605457 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 434 ttccatgaccacaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaa 493 |||||||| ||||| |||||||| || | ||| | ||||| ||||| || |||||||| Sbjct: 13605561 ttccatgagaacaactccaaagctgtatatatcaactttttcagtgatctgcgatgttaa 13605620 Query: 494 ccattcaggagctaaatatccaggcgtgcctc 525 ||||||||| || | ||||||||| ||||||| Sbjct: 13605621 ccattcaggtgccagatatccaggtgtgcctc 13605652 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 594 gcattgaagtcatcatctaagaggatgttttgtggtttgacatccaaatg 643 |||||||||| ||||||||||| || || |||||||||| ||||||||| Sbjct: 13580922 gcattgaagttctcatctaagagaatattctgtggtttgatatccaaatg 13580971 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 594 gcattgaagtcatcatctaagaggatgttttgtggtttgacatccaaatg 643 |||||||||| ||||||||||| || || |||||||||| ||||||||| Sbjct: 13574269 gcattgaagttctcatctaagagaatattctgtggtttgatatccaaatg 13574318 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 249 tgcaaacaccacattgcgagcttcatcat 277 ||||| ||||||||||||||||||||||| Sbjct: 13573924 tgcaagcaccacattgcgagcttcatcat 13573952 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 576 ccaaaatcagaaagcttagcatt 598 ||||||||||||||||||||||| Sbjct: 21333565 ccaaaatcagaaagcttagcatt 21333543 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 247 tttgcaaacaccacattgcgagcttca 273 ||||||| ||||||||||||||||||| Sbjct: 13638995 tttgcaagcaccacattgcgagcttca 13639021 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 247 tttgcaaacaccacattgcgagcttca 273 ||||||| ||||||||||||||||||| Sbjct: 13619508 tttgcaagcaccacattgcgagcttca 13619534 Score = 44.1 bits (22), Expect = 0.56 Identities = 67/82 (81%) Strand = Plus / Plus Query: 249 tgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgctagcatg 308 ||||| ||||||||||| ||||||||||| | ||| || |||| || || || | |||| Sbjct: 13580577 tgcaagcaccacattgcaagcttcatcatttgaatcacttcctcctggtatgagaccatg 13580636 Query: 309 tcattactgttcttgtcaatca 330 ||| |||||| ||| ||||||| Sbjct: 13580637 tcactactgtgcttatcaatca 13580658 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatc 466 ||||||||||||||| |||||||| Sbjct: 788693 cacaacaccaaagctgtagacatc 788670
>emb|AL731609.2|OSJN00259 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079M09, complete sequence Length = 187359 Score = 103 bits (52), Expect = 7e-19 Identities = 163/200 (81%) Strand = Plus / Plus Query: 444 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 503 ||||| |||||||| ||||| || | ||||| ||||| |||||||||| ||||||||| Sbjct: 33803 acaactccaaagctgtagacgtcaactttttcagtgatctgtgatgttagccattcaggt 33862 Query: 504 gctaaatatccaggcgtgcctcgcattttggtaaccacttggctcatatccctgtcaatg 563 || ||||||||||||||||||| ||| || || |||| || ||||||||| || Sbjct: 33863 gccaaatatccaggcgtgcctctcatcacagtcactactttactttgatccctgtctatt 33922 Query: 564 agcttgcatagtccaaaatcagaaagcttagcattgaagtcatcatctaagaggatgttt 623 |||||| | ||||||||||||| || || |||||||| | || |||||||| |||||| Sbjct: 33923 agcttggaaagtccaaaatcagccagtttggcattgaatttctcgtctaagagaatgttt 33982 Query: 624 tgtggtttgacatccaaatg 643 |||||||||| ||||||||| Sbjct: 33983 tgtggtttgatatccaaatg 34002 Score = 79.8 bits (40), Expect = 1e-11 Identities = 160/200 (80%) Strand = Plus / Plus Query: 444 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 503 ||||| |||||||| ||||| || | ||||| ||||| |||||||||| ||||||||| Sbjct: 14316 acaactccaaagctgtagacgtcaactttttcagtgatctgtgatgttagccattcaggt 14375 Query: 504 gctaaatatccaggcgtgcctcgcattttggtaaccacttggctcatatccctgtcaatg 563 || | ||||||||| ||||||| ||| ||| || |||| || ||||||||| || Sbjct: 14376 gccagatatccaggtgtgcctctcatcacggtcactactttactttgatccctgtctatt 14435 Query: 564 agcttgcatagtccaaaatcagaaagcttagcattgaagtcatcatctaagaggatgttt 623 || ||| | ||||||||||||| || || |||||||| | || |||||||| || ||| Sbjct: 14436 agtttggaaagtccaaaatcagccagtttggcattgaatttctcgtctaagagaatattt 14495 Query: 624 tgtggtttgacatccaaatg 643 |||||||||| ||||||||| Sbjct: 14496 tgtggtttgatatccaaatg 14515 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 434 ttccatgaccacaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaa 493 |||||||| ||||| |||||||| || | ||| | ||||| ||||| || |||||||| Sbjct: 169 ttccatgagaacaactccaaagctgtatatatcaactttttcagtgatctgcgatgttaa 228 Query: 494 ccattcaggagctaaatatccaggcgtgcctc 525 ||||||||| || | ||||||||| ||||||| Sbjct: 229 ccattcaggtgccagatatccaggtgtgcctc 260 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 247 tttgcaaacaccacattgcgagcttca 273 ||||||| ||||||||||||||||||| Sbjct: 33603 tttgcaagcaccacattgcgagcttca 33629 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 247 tttgcaaacaccacattgcgagcttca 273 ||||||| ||||||||||||||||||| Sbjct: 14116 tttgcaagcaccacattgcgagcttca 14142 Score = 40.1 bits (20), Expect = 8.8 Identities = 53/64 (82%) Strand = Plus / Plus Query: 267 agcttcatcatctcaattacatcctgcttgtgtgctagcatgtcattactgttcttgtca 326 ||||||||||| | ||| || |||| || ||||| | |||||||||||||| ||| ||| Sbjct: 2 agcttcatcatttgaatcacttcctcctggtgtgacaccatgtcattactgtgcttatca 61 Query: 327 atca 330 |||| Sbjct: 62 atca 65
>ref|XM_471708.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2469 Score = 79.8 bits (40), Expect = 1e-11 Identities = 160/200 (80%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 503 ||||| |||||||| ||||| || | ||||| ||||| |||||||||| ||||||||| Sbjct: 2090 acaactccaaagctgtagacgtcaactttttcagtgatctgtgatgttagccattcaggt 2031 Query: 504 gctaaatatccaggcgtgcctcgcattttggtaaccacttggctcatatccctgtcaatg 563 || | ||||||||| ||||||| ||| ||| || |||| || ||||||||| || Sbjct: 2030 gccagatatccaggtgtgcctctcatcacggtcactactttactttgatccctgtctatt 1971 Query: 564 agcttgcatagtccaaaatcagaaagcttagcattgaagtcatcatctaagaggatgttt 623 || ||| | ||||||||||||| || || |||||||| | || |||||||| || ||| Sbjct: 1970 agtttggaaagtccaaaatcagccagtttggcattgaatttctcgtctaagagaatattt 1911 Query: 624 tgtggtttgacatccaaatg 643 |||||||||| ||||||||| Sbjct: 1910 tgtggtttgatatccaaatg 1891 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 247 tttgcaaacaccacattgcgagcttca 273 ||||||| ||||||||||||||||||| Sbjct: 2290 tttgcaagcaccacattgcgagcttca 2264
>ref|XM_471703.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2595 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 503 ||||| |||||||| || ||||| | ||||| |||||||||||||||||||||||||| Sbjct: 2219 acaacgccaaagctgtacacatcaactttttcagtgatttgtgatgttaaccattcaggt 2160 Query: 504 gctaaatatccaggcgtgcctc 525 || | ||||||||| ||||||| Sbjct: 2159 gccagatatccaggtgtgcctc 2138 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 594 gcattgaagtcatcatctaagaggatgttttgtggtttgacatccaaatg 643 |||||||||| ||||||||||| || || |||||||||| ||||||||| Sbjct: 2069 gcattgaagttctcatctaagagaatattctgtggtttgatatccaaatg 2020 Score = 44.1 bits (22), Expect = 0.56 Identities = 67/82 (81%) Strand = Plus / Minus Query: 249 tgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgctagcatg 308 ||||| ||||||||||| ||||||||||| | ||| || |||| || || || | |||| Sbjct: 2414 tgcaagcaccacattgcaagcttcatcatttgaatcacttcctcctggtatgagaccatg 2355 Query: 309 tcattactgttcttgtcaatca 330 ||| |||||| ||| ||||||| Sbjct: 2354 tcactactgtgcttatcaatca 2333
>emb|AL662999.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0018A10, complete sequence Length = 133238 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 444 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 503 ||||| |||||||| || ||||| | ||||| |||||||||||||||||||||||||| Sbjct: 107235 acaacgccaaagctgtacacatcaactttttcagtgatttgtgatgttaaccattcaggt 107294 Query: 504 gctaaatatccaggcgtgcctc 525 || | ||||||||| ||||||| Sbjct: 107295 gccagatatccaggtgtgcctc 107316 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 242 atcaatttgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgc 301 |||| ||||||| ||||||||||| ||||||||||| | ||| || |||| || ||||| Sbjct: 90707 atcattttgcaagcaccacattgcaagcttcatcatttgaatcacttcctcctggtgtga 90766 Query: 302 tagcatgtcattactgttcttgtcaatca 330 | |||||||||||||| ||||||||||| Sbjct: 90767 gaccatgtcattactgtgcttgtcaatca 90795 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 444 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 503 ||||| || ||||| |||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 100582 acaacgccgaagctgtagacatcaactttttcagtgatttgtgatgttaaccattcaggt 100641 Query: 504 gctaaatatccaggcgtgcctc 525 || | |||||| || ||||||| Sbjct: 100642 gccagatatcctggtgtgcctc 100663 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 471 ttttctgtgatttgtgatgttaaccattcaggagctaaatatccaggcgtgcctc 525 ||||| |||||||| ||||||||||||||||| || | ||||||||| ||||||| Sbjct: 90935 ttttcagtgatttgcgatgttaaccattcaggtgccagatatccaggtgtgcctc 90989 Score = 60.0 bits (30), Expect = 1e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 249 tgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgctagcatg 308 ||||| ||||||||||| ||||||||||| | ||| || |||| || ||||| | |||| Sbjct: 131839 tgcaagcaccacattgcaagcttcatcatttgaatcacttcctcctggtgtgacaccatg 131898 Query: 309 tcattactgttcttgtcaatca 330 |||||||||| ||| ||||||| Sbjct: 131899 tcattactgtgcttatcaatca 131920 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 434 ttccatgaccacaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaa 493 |||||||| ||||| |||||||| || | ||| | ||||| ||||| || |||||||| Sbjct: 132024 ttccatgagaacaactccaaagctgtatatatcaactttttcagtgatctgcgatgttaa 132083 Query: 494 ccattcaggagctaaatatccaggcgtgcctc 525 ||||||||| || | ||||||||| ||||||| Sbjct: 132084 ccattcaggtgccagatatccaggtgtgcctc 132115 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 594 gcattgaagtcatcatctaagaggatgttttgtggtttgacatccaaatg 643 |||||||||| ||||||||||| || || |||||||||| ||||||||| Sbjct: 107385 gcattgaagttctcatctaagagaatattctgtggtttgatatccaaatg 107434 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 594 gcattgaagtcatcatctaagaggatgttttgtggtttgacatccaaatg 643 |||||||||| ||||||||||| || || |||||||||| ||||||||| Sbjct: 100732 gcattgaagttctcatctaagagaatattctgtggtttgatatccaaatg 100781 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 249 tgcaaacaccacattgcgagcttcatcat 277 ||||| ||||||||||||||||||||||| Sbjct: 100387 tgcaagcaccacattgcgagcttcatcat 100415 Score = 44.1 bits (22), Expect = 0.56 Identities = 67/82 (81%) Strand = Plus / Plus Query: 249 tgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgctagcatg 308 ||||| ||||||||||| ||||||||||| | ||| || |||| || || || | |||| Sbjct: 107040 tgcaagcaccacattgcaagcttcatcatttgaatcacttcctcctggtatgagaccatg 107099 Query: 309 tcattactgttcttgtcaatca 330 ||| |||||| ||| ||||||| Sbjct: 107100 tcactactgtgcttatcaatca 107121
>ref|NM_188329.1| Oryza sativa (japonica cultivar-group), Ozsa8080 predicted mRNA Length = 2268 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 575 tccaaaatcagaaagcttagcattgaagtcatcatctaagaggatgttttgtggtttgac 634 |||||||||| ||| || |||||||||| ||||||||||||||| ||||||||||||| Sbjct: 1824 tccaaaatcacaaactttggcattgaagttatcatctaagaggatattttgtggtttgat 1765 Query: 635 atcca 639 ||||| Sbjct: 1764 atcca 1760 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 227 aggccttcttttgcaatcaatttgcaaacaccacattgcgagcttcatcatctcaattac 286 ||||||||| ||||||||| | ||||| ||||||||||| |||||||| |||| || || Sbjct: 2172 aggccttctgttgcaatcactctgcaagcaccacattgcaagcttcattatctttatcac 2113 Query: 287 atcctg 292 |||||| Sbjct: 2112 atcctg 2107 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagg 502 |||||| ||| | ||||||||||| |||| || ||||| || ||||||||||||||||| Sbjct: 1956 cacaactccataactatagacatcaaccttctcggtgatatgagatgttaaccattcagg 1897 Query: 503 agctaaatatccaggcgtgcctcgcattttggt 535 | ||||||||||| || |||| |||| |||| Sbjct: 1896 ggacaaatatccaggtgttcctctcattctggt 1864
>ref|XM_471701.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2199 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 242 atcaatttgcaaacaccacattgcgagcttcatcatctcaattacatcctgcttgtgtgc 301 |||| ||||||| ||||||||||| ||||||||||| | ||| || |||| || ||||| Sbjct: 2025 atcattttgcaagcaccacattgcaagcttcatcatttgaatcacttcctcctggtgtga 1966 Query: 302 tagcatgtcattactgttcttgtcaatca 330 | |||||||||||||| ||||||||||| Sbjct: 1965 gaccatgtcattactgtgcttgtcaatca 1937
>gb|AF230509.1| Oryza sativa subsp. japonica serine/threonine protein kinase (YK20) gene, partial cds Length = 528 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 575 tccaaaatcagaaagcttagcattgaagtcatcatctaagaggatgttttgtggtttgac 634 |||||||||| ||| || |||||||||| ||||||||||||||| ||||||||||||| Sbjct: 399 tccaaaatcacaaactttggcattgaagttatcatctaagaggatattttgtggtttgat 340 Query: 635 atcca 639 ||||| Sbjct: 339 atcca 335 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Minus Query: 477 gtgatttgtgatgttaaccattcaggagctaaatatccaggcgtgcctcgcattttggt 535 ||||| || ||||||||||||||||| | ||||||||||| || |||| |||| |||| Sbjct: 497 gtgatatgagatgttaaccattcaggggacaaatatccaggtgttcctctcattctggt 439
>ref|XM_471702.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2796 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 503 ||||| || ||||| |||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 2420 acaacgccgaagctgtagacatcaactttttcagtgatttgtgatgttaaccattcaggt 2361 Query: 504 gctaaatatccaggcgtgcctc 525 || | |||||| || ||||||| Sbjct: 2360 gccagatatcctggtgtgcctc 2339 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 594 gcattgaagtcatcatctaagaggatgttttgtggtttgacatccaaatg 643 |||||||||| ||||||||||| || || |||||||||| ||||||||| Sbjct: 2270 gcattgaagttctcatctaagagaatattctgtggtttgatatccaaatg 2221 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 249 tgcaaacaccacattgcgagcttcatcat 277 ||||| ||||||||||||||||||||||| Sbjct: 2615 tgcaagcaccacattgcgagcttcatcat 2587
>dbj|AK072639.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133I20, full insert sequence Length = 4259 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 444 acaacaccaaagctatagacatcggccttttctgtgatttgtgatgttaaccattcagga 503 ||||| || ||||| |||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 325 acaacgccgaagctgtagacatcaactttttcagtgatttgtgatgttaaccattcaggt 384 Query: 504 gctaaatatccaggcgtgcctc 525 || | |||||| || ||||||| Sbjct: 385 gccagatatcctggtgtgcctc 406 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 594 gcattgaagtcatcatctaagaggatgttttgtggtttgacatccaaatg 643 |||||||||| ||||||||||| || || |||||||||| ||||||||| Sbjct: 475 gcattgaagttctcatctaagagaatattctgtggtttgatatccaaatg 524 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 249 tgcaaacaccacattgcgagcttcatcat 277 ||||| ||||||||||||||||||||||| Sbjct: 130 tgcaagcaccacattgcgagcttcatcat 158
>gb|AF230506.1| Oryza sativa subsp. japonica serine/threonine protein kinase (YK15) gene, partial cds Length = 527 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 471 ttttctgtgatttgtgatgttaaccattcaggagctaaatatccaggcgtgcctc 525 ||||| |||||||| ||||||||||||||||| || | ||||||||| ||||||| Sbjct: 502 ttttcagtgatttgcgatgttaaccattcaggtgccagatatccaggtgtgcctc 448
>gb|AY427138.1| Vitis amurensis isolate stkVa011 resistance protein candidate gene, partial cds Length = 545 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 579 aaatcagaaagcttagcattgaagtcatcatctaagaggatgttttgtggtttgacatcc 638 |||||||||| ||| ||||| |||| ||||| || ||||||||||| |||||||||||| Sbjct: 412 aaatcagaaacctttgcattcaagtgttcatccaaaaggatgttttggggtttgacatcc 353 Query: 639 aa 640 || Sbjct: 352 aa 351
>ref|NM_115773.3| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT3G59110 mRNA, complete cds Length = 2416 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 576 ccaaaatcagaaagcttagcattgaagtcatc 607 ||||||||||||||||| |||||||||||||| Sbjct: 1527 ccaaaatcagaaagctttgcattgaagtcatc 1496
>emb|AL163527.1|ATF17J16 Arabidopsis thaliana DNA chromosome 3, BAC clone F17J16 Length = 89517 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 576 ccaaaatcagaaagcttagcattgaagtcatc 607 ||||||||||||||||| |||||||||||||| Sbjct: 70228 ccaaaatcagaaagctttgcattgaagtcatc 70197
>emb|BX824496.1|CNS0A4Q5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH52ZB06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2354 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 576 ccaaaatcagaaagcttagcattgaagtcatc 607 ||||||||||||||||| |||||||||||||| Sbjct: 1529 ccaaaatcagaaagctttgcattgaagtcatc 1498
>ref|NM_196411.1| Oryza sativa (japonica cultivar-group) putative serine /threonine kinase similar to NAK (OSJNBb0044I14.4), mRNA Length = 1287 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatcggccttt 473 |||||||||||||||||||||||| |||||| Sbjct: 852 cacaacaccaaagctatagacatctgccttt 822
>gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0044A10, from chromosome 10, complete sequence Length = 173374 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatcggccttt 473 |||||||||||||||||||||||| |||||| Sbjct: 159685 cacaacaccaaagctatagacatctgccttt 159655
>gb|AC090487.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0044I14, from Chromosome 10, complete sequence Length = 63167 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 443 cacaacaccaaagctatagacatcggccttt 473 |||||||||||||||||||||||| |||||| Sbjct: 16857 cacaacaccaaagctatagacatctgccttt 16887
>gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060A14, from chromosome 10, complete sequence Length = 151343 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatcggccttt 473 |||||||||||||||||||||||| |||||| Sbjct: 5813 cacaacaccaaagctatagacatctgccttt 5783
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatcggccttt 473 |||||||||||||||||||||||| |||||| Sbjct: 13313436 cacaacaccaaagctatagacatctgccttt 13313406
>dbj|AK102358.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091H20, full insert sequence Length = 1952 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatcggccttt 473 |||||||||||||||||||||||| |||||| Sbjct: 1293 cacaacaccaaagctatagacatctgccttt 1263
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatcggccttt 473 |||||||||||||||||||||||| |||||| Sbjct: 13320776 cacaacaccaaagctatagacatctgccttt 13320746
>ref|NM_190063.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1494 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagacatcgg 468 ||||||||||||||||||||||||| Sbjct: 842 acaacaccaaagctatagacatcgg 818
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagacatcgg 468 ||||||||||||||||||||||||| Sbjct: 127714 acaacaccaaagctatagacatcgg 127690
>dbj|AK101371.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035N01, full insert sequence Length = 2568 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagacatcgg 468 ||||||||||||||||||||||||| Sbjct: 1155 acaacaccaaagctatagacatcgg 1131
>ref|NM_111149.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT3G02810 mRNA, complete cds Length = 2146 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatc 466 |||||||||||||||||||||||| Sbjct: 977 cacaacaccaaagctatagacatc 954 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 576 ccaaaatcagaaagcttagcattgaagtcatcatctaa 613 ||||||||||||||||||| | |||||||||||||| Sbjct: 832 ccaaaatcagaaagcttaggagaaaagtcatcatctaa 795
>gb|AC133609.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0002C14, complete sequence Length = 154029 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 576 ccaaaatcagaaagcttagcattgaagtcatcatctaagaggat 619 ||||||||||||| ||||||||| | |||| |||||||||||| Sbjct: 120674 ccaaaatcagaaatcttagcattcatttcataatctaagaggat 120631
>gb|AC018363.8|ATAC018363 Arabidopsis thaliana chromosome III BAC F13E7 genomic sequence, complete sequence Length = 100559 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatc 466 |||||||||||||||||||||||| Sbjct: 76590 cacaacaccaaagctatagacatc 76567 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 576 ccaaaatcagaaagcttagcattgaagtcatcatctaa 613 ||||||||||||||||||| | |||||||||||||| Sbjct: 76445 ccaaaatcagaaagcttaggagaaaagtcatcatctaa 76408
>gb|AC134924.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0076M06, complete sequence Length = 133581 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 576 ccaaaatcagaaagcttagcattgaagtcatcatctaagaggat 619 ||||||||||||| ||||||||| | |||| |||||||||||| Sbjct: 18434 ccaaaatcagaaatcttagcattcatttcataatctaagaggat 18391
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 576 ccaaaatcagaaagcttagcattgaagtcatcatctaagaggat 619 ||||||||||||| ||||||||| | |||| |||||||||||| Sbjct: 26215559 ccaaaatcagaaatcttagcattcatttcataatctaagaggat 26215516 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 446 aacaccaaagctatagacatc 466 ||||||||||||||||||||| Sbjct: 20217844 aacaccaaagctatagacatc 20217864
>gb|BT004942.1| Arabidopsis thaliana clone U20396 putative protein kinase (At3g02810) mRNA, complete cds Length = 1708 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatc 466 |||||||||||||||||||||||| Sbjct: 777 cacaacaccaaagctatagacatc 754 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 576 ccaaaatcagaaagcttagcattgaagtcatcatctaa 613 ||||||||||||||||||| | |||||||||||||| Sbjct: 632 ccaaaatcagaaagcttaggagaaaagtcatcatctaa 595
>gb|BT004041.1| Arabidopsis thaliana clone RAFL15-02-J08 (R20396) putative protein kinase (At3g02810) mRNA, complete cds Length = 2162 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatc 466 |||||||||||||||||||||||| Sbjct: 977 cacaacaccaaagctatagacatc 954 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 576 ccaaaatcagaaagcttagcattgaagtcatcatctaa 613 ||||||||||||||||||| | |||||||||||||| Sbjct: 832 ccaaaatcagaaagcttaggagaaaagtcatcatctaa 795
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 576 ccaaaatcagaaagcttagcattgaagtcatcatctaagaggat 619 ||||||||||||| ||||||||| | |||| |||||||||||| Sbjct: 26531043 ccaaaatcagaaatcttagcattcatttcataatctaagaggat 26531000 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 446 aacaccaaagctatagacatc 466 ||||||||||||||||||||| Sbjct: 20502713 aacaccaaagctatagacatc 20502733
>gb|BT020441.1| Arabidopsis thaliana At1g26970 mRNA, complete cds Length = 1239 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 575 tccaaaatcagaaagcttagcattgaa 601 |||||||||||||||||| |||||||| Sbjct: 705 tccaaaatcagaaagctttgcattgaa 679
>ref|NM_101304.2| Arabidopsis thaliana APK2A (PROTEIN KINASE 2A); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT1G14370 (APK2A) mRNA, complete cds Length = 1822 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 579 aaatcagaaagcttagcattgaagtca 605 ||||| ||||||||||||||||||||| Sbjct: 905 aaatctgaaagcttagcattgaagtca 879
>ref|NM_102461.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT1G26970 mRNA, complete cds Length = 1550 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 575 tccaaaatcagaaagcttagcattgaa 601 |||||||||||||||||| |||||||| Sbjct: 849 tccaaaatcagaaagctttgcattgaa 823
>gb|BT020268.1| Arabidopsis thaliana At1g26970 mRNA, complete cds Length = 1531 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 575 tccaaaatcagaaagcttagcattgaa 601 |||||||||||||||||| |||||||| Sbjct: 845 tccaaaatcagaaagctttgcattgaa 819
>ref|NM_185226.2| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1581 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 576 ccaaaatcagaaagcttagcatt 598 ||||||||||||||||||||||| Sbjct: 1022 ccaaaatcagaaagcttagcatt 1000
>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0075A10, complete sequence Length = 171101 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagacatc 466 ||||||||||||||||||||||| Sbjct: 160238 acaacaccaaagctatagacatc 160216 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagac 463 |||||||||||||||||||| Sbjct: 150803 acaacaccaaagctatagac 150784
>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11, complete sequence Length = 112065 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagacatc 466 ||||||||||||||||||||||| Sbjct: 22934 acaacaccaaagctatagacatc 22912 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagac 463 |||||||||||||||||||| Sbjct: 43416 acaacaccaaagctatagac 43397 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 acaccaaagctatagacatc 466 |||||||||||||||||||| Sbjct: 35334 acaccaaagctatagacatc 35315 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagac 463 |||||||||||||||||||| Sbjct: 13499 acaacaccaaagctatagac 13480
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 576 ccaaaatcagaaagcttagcatt 598 ||||||||||||||||||||||| Sbjct: 147039 ccaaaatcagaaagcttagcatt 147017
>gb|AY059894.1| Arabidopsis thaliana Strong similarity to APK2a protein (At1g14370; F14L17.14) mRNA, complete cds Length = 1598 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 579 aaatcagaaagcttagcattgaagtca 605 ||||| ||||||||||||||||||||| Sbjct: 905 aaatctgaaagcttagcattgaagtca 879
>gb|AF334731.1| Arabidopsis thaliana clone C00152 (e) putative protein kinase (At1g14370) mRNA, complete cds Length = 1281 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 579 aaatcagaaagcttagcattgaagtca 605 ||||| ||||||||||||||||||||| Sbjct: 713 aaatctgaaagcttagcattgaagtca 687
>gb|U82402.1|ATU82402 Arabidopsis thaliana putative protein kinase PK9 (PK9) gene, partial cds Length = 372 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 575 tccaaaatcagaaagcttagcattgaa 601 |||||||||||||||||| |||||||| Sbjct: 292 tccaaaatcagaaagctttgcattgaa 266
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 444 acaacaccaaagctatagacatc 466 ||||||||||||||||||||||| Sbjct: 11522845 acaacaccaaagctatagacatc 11522867 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 444 acaacaccaaagctatagacatc 466 ||||||||||||||||||||||| Sbjct: 11430457 acaacaccaaagctatagacatc 11430479 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 acaccaaagctatagacatcgg 468 |||||||||||||||||||||| Sbjct: 21506288 acaccaaagctatagacatcgg 21506309 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 acaccaaagctatagacatcgg 468 |||||||||||||||||||||| Sbjct: 21501679 acaccaaagctatagacatcgg 21501700 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 acaccaaagctatagacatcgg 468 |||||||||||||||||||||| Sbjct: 21470305 acaccaaagctatagacatcgg 21470326 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagac 463 |||||||||||||||||||| Sbjct: 10912307 acaacaccaaagctatagac 10912288 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 tttctgtgatttgtgatgtt 491 |||||||||||||||||||| Sbjct: 9045106 tttctgtgatttgtgatgtt 9045125
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagacatc 466 ||||||||||||||||||||||| Sbjct: 25918706 acaacaccaaagctatagacatc 25918684 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagac 463 |||||||||||||||||||| Sbjct: 25940288 acaacaccaaagctatagac 25940269 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 acaccaaagctatagacatc 466 |||||||||||||||||||| Sbjct: 25931106 acaccaaagctatagacatc 25931087 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagac 463 |||||||||||||||||||| Sbjct: 25909271 acaacaccaaagctatagac 25909252
>emb|BX816511.1|CNS0ADWM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH52ZG10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1551 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 575 tccaaaatcagaaagcttagcattgaa 601 |||||||||||||||||| |||||||| Sbjct: 849 tccaaaatcagaaagctttgcattgaa 823
>gb|AC000348.2|AC000348 Genomic sequence for Arabidopsis thaliana BAC T7N9 from chromosome I, complete sequence Length = 111566 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 575 tccaaaatcagaaagcttagcattgaa 601 |||||||||||||||||| |||||||| Sbjct: 2591 tccaaaatcagaaagctttgcattgaa 2565
>dbj|AP005836.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0013F08 Length = 166989 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 444 acaacaccaaagctatagacatc 466 ||||||||||||||||||||||| Sbjct: 38852 acaacaccaaagctatagacatc 38874
>dbj|AP006526.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0591A03 Length = 147043 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 444 acaacaccaaagctatagacatc 466 ||||||||||||||||||||||| Sbjct: 64145 acaacaccaaagctatagacatc 64167
>dbj|AK120189.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034P20, full insert sequence Length = 2860 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagacatc 466 ||||||||||||||||||||||| Sbjct: 2270 acaacaccaaagctatagacatc 2248
>dbj|AK100142.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011I08, full insert sequence Length = 1393 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 576 ccaaaatcagaaagcttagcatt 598 ||||||||||||||||||||||| Sbjct: 377 ccaaaatcagaaagcttagcatt 355
>gb|AC005508.1|AC005508 Arabidopsis thaliana chromosome I BAC T2P11 genomic sequence, complete sequence Length = 85372 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 575 tccaaaatcagaaagcttagcattgaa 601 |||||||||||||||||| |||||||| Sbjct: 69045 tccaaaatcagaaagctttgcattgaa 69019
>dbj|AP006692.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT06K23, TM0391, complete sequence Length = 98505 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 573 agtccaaaatcagaaagcttagcattg 599 |||||||||||||||||||| |||||| Sbjct: 64703 agtccaaaatcagaaagcttggcattg 64729
>dbj|AP006129.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT27K02, TM0225, complete sequence Length = 70805 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 573 agtccaaaatcagaaagcttagcattg 599 |||||||||||||||||||| |||||| Sbjct: 21620 agtccaaaatcagaaagcttggcattg 21646
>dbj|D88206.1| Arabidopsis thaliana APK2a mRNA for protein kinase, complete cds Length = 1587 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 579 aaatcagaaagcttagcattgaagtca 605 ||||| ||||||||||||||||||||| Sbjct: 889 aaatctgaaagcttagcattgaagtca 863
>ref|NM_121319.3| Arabidopsis thaliana PBS1 (AVRPPHB SUSCEPTIBLE 1); kinase AT5G13160 (PBS1) mRNA, complete cds Length = 1847 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 573 agtccaaaatcagaaagcttag 594 |||||||||||||||||||||| Sbjct: 974 agtccaaaatcagaaagcttag 953
>ref|NM_188527.1| Oryza sativa (japonica cultivar-group), Ozsa8196 predicted mRNA Length = 2250 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 447 acaccaaagctatagacatcggcctt 472 |||||||||||||||||||| ||||| Sbjct: 1910 acaccaaagctatagacatctgcctt 1885
>ref|NM_191518.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2571 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 447 acaccaaagctatagacatcgg 468 |||||||||||||||||||||| Sbjct: 2195 acaccaaagctatagacatcgg 2174
>ref|NM_015172.2| Homo sapiens BAT2 domain containing 1 (BAT2D1), mRNA Length = 10383 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 gaagctagaggtggaactgagg 111 |||||||||||||||||||||| Sbjct: 5518 gaagctagaggtggaactgagg 5497
>emb|AJ830722.1| Zea mays pk8-a gene for putative protein kinase, exons 1-8 Length = 5378 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 573 agtccaaaatcagaaagcttagcattgaagtcatcatc 610 |||||||||||||||||||| ||||||| || ||||| Sbjct: 4005 agtccaaaatcagaaagcttgccattgaattcttcatc 3968
>emb|AJ830721.1| Zea mays mRNA for putative protein kinase (pk8-a gene) Length = 2336 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 573 agtccaaaatcagaaagcttagcattgaagtcatcatc 610 |||||||||||||||||||| ||||||| || ||||| Sbjct: 1431 agtccaaaatcagaaagcttgccattgaattcttcatc 1394
>emb|AL021579.1|HS598F2 Human DNA sequence from clone RP4-598F2 on chromosome 1q23.1-24.3 Contains part of the gene for HBxAg transactivated protein 2 (XTP2), complete sequence Length = 99886 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 gaagctagaggtggaactgagg 111 |||||||||||||||||||||| Sbjct: 67617 gaagctagaggtggaactgagg 67596
>emb|AL138731.10| Human DNA sequence from clone RP1-23E21 on chromosome 6 Contains a novel gene and a 26S proteasome-associated PAD1 homolog POH1 pseudogene, complete sequence Length = 72312 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 349 tcttcaccttttcttccaacag 370 |||||||||||||||||||||| Sbjct: 10225 tcttcaccttttcttccaacag 10204
>emb|AL391711.1|ATT19L5 Arabidopsis thaliana DNA chromosome 5, BAC clone T19L5 (ESSA project) Length = 82207 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 573 agtccaaaatcagaaagcttag 594 |||||||||||||||||||||| Sbjct: 52232 agtccaaaatcagaaagcttag 52211
>emb|AL162004.1|HSM802522 Homo sapiens mRNA; cDNA DKFZp434M1616 (from clone DKFZp434M1616) Length = 5630 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 gaagctagaggtggaactgagg 111 |||||||||||||||||||||| Sbjct: 895 gaagctagaggtggaactgagg 874
>dbj|AB029019.2| Homo sapiens mRNA for KIAA1096 protein, partial cds Length = 7421 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 gaagctagaggtggaactgagg 111 |||||||||||||||||||||| Sbjct: 2464 gaagctagaggtggaactgagg 2443
>dbj|AK124374.1| Homo sapiens cDNA FLJ42383 fis, clone UTERU2036623 Length = 2282 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 gaagctagaggtggaactgagg 111 |||||||||||||||||||||| Sbjct: 1186 gaagctagaggtggaactgagg 1165
>gb|AY078037.1| Arabidopsis thaliana AT5g13160/T19L5_120 mRNA, complete cds Length = 1371 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 573 agtccaaaatcagaaagcttag 594 |||||||||||||||||||||| Sbjct: 701 agtccaaaatcagaaagcttag 680
>gb|AF372927.1|AF372927 Arabidopsis thaliana AT5g13160/T19L5_120 mRNA, complete cds Length = 1667 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 573 agtccaaaatcagaaagcttag 594 |||||||||||||||||||||| Sbjct: 844 agtccaaaatcagaaagcttag 823
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagacatcggccttt 473 ||||||||||||||| ||||||| |||||| Sbjct: 30306557 acaacaccaaagctaaagacatcagccttt 30306528 Score = 40.1 bits (20), Expect = 8.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 434 ttccatgaccacaacaccaaagctatagacatcggccttttctgtgat 481 |||||| | |||||| ||||||||||| ||||| ||||||| ||||| Sbjct: 20570157 ttccattatcacaacgccaaagctatacacatcaaccttttcagtgat 20570110
>emb|BX832312.1|CNS09YPK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH64ZF09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1700 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 573 agtccaaaatcagaaagcttag 594 |||||||||||||||||||||| Sbjct: 977 agtccaaaatcagaaagcttag 956
>gb|AF314176.1|AF314176 Arabidopsis thaliana protein serine/threonine kinase PBS1 (PBS1) mRNA, complete cds Length = 1774 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 573 agtccaaaatcagaaagcttag 594 |||||||||||||||||||||| Sbjct: 952 agtccaaaatcagaaagcttag 931
>gb|AF488829.1| Homo sapiens HBxAg transactivated protein 2 (XTP2) mRNA, complete cds Length = 8106 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 gaagctagaggtggaactgagg 111 |||||||||||||||||||||| Sbjct: 5252 gaagctagaggtggaactgagg 5231
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 447 acaccaaagctatagacatcggcctt 472 |||||||||||||||||||| ||||| Sbjct: 133411 acaccaaagctatagacatctgcctt 133436
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0417G05 Length = 147803 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 447 acaccaaagctatagacatcggcctt 472 |||||||||||||||||||| ||||| Sbjct: 63320 acaccaaagctatagacatctgcctt 63345
>dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0489D11 Length = 150757 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 acaccaaagctatagacatcgg 468 |||||||||||||||||||||| Sbjct: 67898 acaccaaagctatagacatcgg 67919 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 acaccaaagctatagacatcgg 468 |||||||||||||||||||||| Sbjct: 63289 acaccaaagctatagacatcgg 63310 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 acaccaaagctatagacatcgg 468 |||||||||||||||||||||| Sbjct: 31915 acaccaaagctatagacatcgg 31936
>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1210_A07 Length = 131394 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 acaccaaagctatagacatcgg 468 |||||||||||||||||||||| Sbjct: 123393 acaccaaagctatagacatcgg 123414 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 acaccaaagctatagacatcgg 468 |||||||||||||||||||||| Sbjct: 118784 acaccaaagctatagacatcgg 118805 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 447 acaccaaagctatagacatcgg 468 |||||||||||||||||||||| Sbjct: 87410 acaccaaagctatagacatcgg 87431
>dbj|AP007231.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0535F09 Length = 175050 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagacatcggccttt 473 ||||||||||||||| ||||||| |||||| Sbjct: 172892 acaacaccaaagctaaagacatcagccttt 172863
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagacatcggccttt 473 ||||||||||||||| ||||||| |||||| Sbjct: 53152 acaacaccaaagctaaagacatcagccttt 53123
>dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1070A12 Length = 148449 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 447 acaccaaagctatagacatcgg 468 |||||||||||||||||||||| Sbjct: 17810 acaccaaagctatagacatcgg 17789
>gb|AC012188.2|F14L17 Sequence of BAC F14L17 from Arabidopsis thaliana chromosome 1, complete sequence Length = 111686 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 579 aaatcagaaagcttagcattgaagtc 604 ||||| |||||||||||||||||||| Sbjct: 48200 aaatctgaaagcttagcattgaagtc 48175
>dbj|AK073747.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068K18, full insert sequence Length = 1961 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagacatcggccttt 473 ||||||||||||||| ||||||| |||||| Sbjct: 1455 acaacaccaaagctaaagacatcagccttt 1426
>emb|AL096857.1|HS598F21A Novel human mRNA from chromosome 1, which has similarities to BAT2 genes Length = 10174 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 gaagctagaggtggaactgagg 111 |||||||||||||||||||||| Sbjct: 5309 gaagctagaggtggaactgagg 5288
>ref|NM_111080.2| Arabidopsis thaliana ATP binding / kinase/ protein serine/threonine kinase AT3G02130 mRNA, complete cds Length = 3224 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 594 gcattgaagtcatcatctaagaggatgtt 622 |||||| |||||||||||| ||||||||| Sbjct: 2536 gcattgcagtcatcatctaggaggatgtt 2508
>ref|NM_128452.3| Arabidopsis thaliana APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT2G28930 (APK1B) transcript variant AT2G28930.1 mRNA, complete cds Length = 2001 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 579 aaatcagaaagcttagcattg 599 ||||||||||||||||||||| Sbjct: 883 aaatcagaaagcttagcattg 863
>ref|NM_001036362.1| Arabidopsis thaliana APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT2G28930 (APK1B) transcript variant AT2G28930.2 mRNA, complete cds Length = 1995 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 579 aaatcagaaagcttagcattg 599 ||||||||||||||||||||| Sbjct: 877 aaatcagaaagcttagcattg 857
>ref|NM_001036363.1| Arabidopsis thaliana APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT2G28930 (APK1B) transcript variant AT2G28930.3 mRNA, complete cds Length = 2042 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 579 aaatcagaaagcttagcattg 599 ||||||||||||||||||||| Sbjct: 924 aaatcagaaagcttagcattg 904
>gb|AC120889.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0018K14, complete sequence Length = 152725 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 446 aacaccaaagctatagacatc 466 ||||||||||||||||||||| Sbjct: 136942 aacaccaaagctatagacatc 136962
>gb|AC133291.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0542B04, complete sequence Length = 182823 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 446 aacaccaaagctatagacatc 466 ||||||||||||||||||||| Sbjct: 36986 aacaccaaagctatagacatc 37006
>gb|AC129178.4| Mus musculus BAC clone RP23-217G18 from chromosome 16, complete sequence Length = 185769 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 catgtgaagctagaggtggaa 105 ||||||||||||||||||||| Sbjct: 55054 catgtgaagctagaggtggaa 55074
>gb|BT013410.1| Lycopersicon esculentum clone 132046F, mRNA sequence Length = 2078 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 576 ccaaaatcagaaagcttagcattgaagtcatcatcta 612 ||||||||||||| || ||||||||||| ||||||| Sbjct: 1337 ccaaaatcagaaatttttgcattgaagtcttcatcta 1301
>gb|BT012787.1| Lycopersicon esculentum clone 113777R, mRNA sequence Length = 1823 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 575 tccaaaatcagaaagcttagcattg 599 |||||||||||||||||| |||||| Sbjct: 715 tccaaaatcagaaagctttgcattg 691
>gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BAC F1C9 genomic sequence, complete sequence Length = 103960 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 594 gcattgaagtcatcatctaagaggatgtt 622 |||||| |||||||||||| ||||||||| Sbjct: 25583 gcattgcagtcatcatctaggaggatgtt 25611
>gb|AC009755.7|ATAC009755 Arabidopsis thaliana chromosome III BAC F14P3 genomic sequence, complete sequence Length = 94369 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 594 gcattgaagtcatcatctaagaggatgtt 622 |||||| |||||||||||| ||||||||| Sbjct: 91127 gcattgcagtcatcatctaggaggatgtt 91155
>gb|AC005727.3| Arabidopsis thaliana chromosome 2 clone F8N16 map mi54, complete sequence Length = 107097 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 579 aaatcagaaagcttagcattg 599 ||||||||||||||||||||| Sbjct: 97096 aaatcagaaagcttagcattg 97076
>gb|AC005315.3| Arabidopsis thaliana chromosome 2 clone T9I4 map mi54, complete sequence Length = 108393 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 579 aaatcagaaagcttagcattg 599 ||||||||||||||||||||| Sbjct: 5648 aaatcagaaagcttagcattg 5628
>gb|AC108515.3| Homo sapiens BAC clone RP11-431J17 from 4, complete sequence Length = 90286 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 579 aaatcagaaagcttagcattg 599 ||||||||||||||||||||| Sbjct: 49721 aaatcagaaagcttagcattg 49701
>dbj|D10152.1|ATHAPK1B A. thaliana APK1b gene for protein kinase, partial sequence Length = 616 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 579 aaatcagaaagcttagcattg 599 ||||||||||||||||||||| Sbjct: 244 aaatcagaaagcttagcattg 224
>dbj|AK118585.1| Arabidopsis thaliana At2g28930 mRNA for putative protein kinase, complete cds, clone: RAFL19-82-M09 Length = 1631 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 579 aaatcagaaagcttagcattg 599 ||||||||||||||||||||| Sbjct: 951 aaatcagaaagcttagcattg 931
>dbj|AK117442.1| Arabidopsis thaliana At3g02130 mRNA for putative protein kinase, complete cds, clone: RAFL17-04-I18 Length = 3083 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 594 gcattgaagtcatcatctaagaggatgtt 622 |||||| |||||||||||| ||||||||| Sbjct: 2536 gcattgcagtcatcatctaggaggatgtt 2508
>ref|NM_124251.3| Arabidopsis thaliana kinase AT5G48740 mRNA, complete cds Length = 3383 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 acaccaaagctatagacatc 466 |||||||||||||||||||| Sbjct: 2445 acaccaaagctatagacatc 2426
>ref|XM_550053.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2391 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatc 466 |||||||||||||||||| ||||| Sbjct: 1714 cacaacaccaaagctatacacatc 1691
>ref|NM_194082.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3510 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatc 466 ||||||||||||||| |||||||| Sbjct: 2664 cacaacaccaaagctgtagacatc 2641
>gb|AC113005.10| Mus musculus chromosome 3, clone RP23-299B23, complete sequence Length = 218917 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 gctctcttctgatagagaag 405 |||||||||||||||||||| Sbjct: 30517 gctctcttctgatagagaag 30498
>gb|AC161496.6| Mus musculus chromosome 3, clone RP23-119A9, complete sequence Length = 203655 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gctctcttctgatagagaag 405 |||||||||||||||||||| Sbjct: 82983 gctctcttctgatagagaag 83002
>gb|AC160095.1| Lycopersicon esculentum chromosome 0 clone BB-BA4 map MAP_LOC, complete sequence Length = 121127 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 ttagcattgaagtcatcatc 610 |||||||||||||||||||| Sbjct: 61532 ttagcattgaagtcatcatc 61513
>gb|AY389698.1| Hyacinthus orientalis tyrosine kinase mRNA, partial cds Length = 696 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 ccaaaatcagaaagcttagc 595 |||||||||||||||||||| Sbjct: 458 ccaaaatcagaaagcttagc 439
>gb|AC011705.11| Drosophila melanogaster clone BACR10C18, complete sequence Length = 170975 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 cttttctgtgatttgtgatg 489 |||||||||||||||||||| Sbjct: 35555 cttttctgtgatttgtgatg 35574
>gb|AC123654.9| Mus musculus chromosome 15, clone RP23-161D16, complete sequence Length = 182376 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 tgatacatgtgaagctagag 99 |||||||||||||||||||| Sbjct: 50102 tgatacatgtgaagctagag 50083
>gb|BT014363.1| Lycopersicon esculentum clone 133649F, mRNA sequence Length = 1614 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 573 agtccaaaatcagaaagcttagca 596 ||||||||||||||||| |||||| Sbjct: 744 agtccaaaatcagaaagtttagca 721
>gb|BT013507.1| Lycopersicon esculentum clone 132197F, mRNA sequence Length = 2149 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 ttagcattgaagtcatcatc 610 |||||||||||||||||||| Sbjct: 1396 ttagcattgaagtcatcatc 1377
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatc 466 ||||||||||||||| |||||||| Sbjct: 31777718 cacaacaccaaagctgtagacatc 31777695
>emb|AJ832128.1| Zea mays partial mRNA for putative protein kinase (pk8-b gene) Length = 1552 Score = 40.1 bits (20), Expect = 8.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 575 tccaaaatcagaaagcttagcattgaagtcatcatc 610 |||||||||||||||||| ||||||| || ||||| Sbjct: 991 tccaaaatcagaaagcttgccattgaattcttcatc 956
>emb|AJ830723.1| Zea mays pk8-b gene for putative protein kinase, exons 1-7 Length = 9397 Score = 40.1 bits (20), Expect = 8.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 575 tccaaaatcagaaagcttagcattgaagtcatcatc 610 |||||||||||||||||| ||||||| || ||||| Sbjct: 7207 tccaaaatcagaaagcttgccattgaattcttcatc 7172
>gb|AC111008.6| Mus musculus BAC clone RP23-415J21 from chromosome 7, complete sequence Length = 193593 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 346 cattcttcaccttttcttccaacagggt 373 ||||||||| | |||||||||||||||| Sbjct: 50590 cattcttcaacatttcttccaacagggt 50617
>ref|XM_663104.1| Cryptosporidium hominis TU502 hypothetical protein, partial mRNA Length = 2316 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 aaagcttagcattgaagtca 605 |||||||||||||||||||| Sbjct: 1541 aaagcttagcattgaagtca 1560
>emb|AL356958.11| Human DNA sequence from clone RP1-51P18 on chromosome 6 Contains part of the gene for a novel protein (KIAA1900), complete sequence Length = 26854 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 gaggatgttttgtggtttga 633 |||||||||||||||||||| Sbjct: 20484 gaggatgttttgtggtttga 20503
>emb|AL160290.15| Human DNA sequence from clone RP11-338O1 on chromosome 10 Contains a novel gene and the 5' end of a novel gene, complete sequence Length = 201397 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 176 gctctctgcattcatggtaccttccaagacct 207 |||| ||||| |||||||| |||||||||||| Sbjct: 32810 gctccctgcactcatggtatcttccaagacct 32779
>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete sequence Length = 134496 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatc 466 ||||||||||||||| |||||||| Sbjct: 102944 cacaacaccaaagctgtagacatc 102921
>emb|BX572091.1| Prochlorococcus marinus MED4 complete genome; segment 2/5 Length = 349082 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 486 gatgttaaccattcaggagctaaa 509 ||||||||||||||||||| |||| Sbjct: 73891 gatgttaaccattcaggagttaaa 73914
>gb|AC159194.3| Mus musculus BAC clone RP23-469D18 from chromosome 7, complete sequence Length = 213870 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 346 cattcttcaccttttcttccaacagggt 373 ||||||||| | |||||||||||||||| Sbjct: 107449 cattcttcaacatttcttccaacagggt 107476
>emb|AL606612.3|OSJN00043 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0021I10, complete sequence Length = 105538 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatc 466 ||||||||||||||| |||||||| Sbjct: 100833 cacaacaccaaagctgtagacatc 100810
>emb|AL161532.2|ATCHRIV32 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 32 Length = 198788 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 acaccaaagctatagacatc 466 |||||||||||||||||||| Sbjct: 34177 acaccaaagctatagacatc 34158
>emb|AL050399.1|ATF25E4 Arabidopsis thaliana DNA chromosome 4, BAC clone F25E4 (ESSA project) Length = 80019 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 acaccaaagctatagacatc 466 |||||||||||||||||||| Sbjct: 55528 acaccaaagctatagacatc 55509
>gb|AC163270.5| Mus musculus chromosome 1, clone RP24-292B21, complete sequence Length = 154928 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tctgcattcatggtaccttc 199 |||||||||||||||||||| Sbjct: 138757 tctgcattcatggtaccttc 138776
>gb|AC010036.6| Drosophila melanogaster 3L BAC RP98-7K20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 190369 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 accaaagctatagacatcgg 468 |||||||||||||||||||| Sbjct: 33810 accaaagctatagacatcgg 33791
>gb|AF480489.1| Nicotiana tabacum EDS1 mRNA, complete cds Length = 1821 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 ttagcattgaagtcatcatc 610 |||||||||||||||||||| Sbjct: 1325 ttagcattgaagtcatcatc 1306
>gb|AC093957.3| Drosophila melanogaster 3L BAC RP98-14E19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 182212 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 accaaagctatagacatcgg 468 |||||||||||||||||||| Sbjct: 45590 accaaagctatagacatcgg 45571
>gb|AC097498.3| Homo sapiens BAC clone RP11-326N15 from 4, complete sequence Length = 144511 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 attcacttgatttgtggcaa 156 |||||||||||||||||||| Sbjct: 39475 attcacttgatttgtggcaa 39456
>gb|AC182663.2| Populus trichocarpa clone Pop1-16M7, complete sequence Length = 77392 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 acaccaaagctatagacatc 466 |||||||||||||||||||| Sbjct: 65031 acaccaaagctatagacatc 65050
>ref|XM_626145.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd5_2050), partial mRNA Length = 2313 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 586 aaagcttagcattgaagtca 605 |||||||||||||||||||| Sbjct: 1538 aaagcttagcattgaagtca 1557
>gb|AC154437.2| Mus musculus BAC clone RP24-194D17 from chromosome 13, complete sequence Length = 180558 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 agatggatgctctcttctga 397 |||||||||||||||||||| Sbjct: 110335 agatggatgctctcttctga 110354
>gb|AY679160.1| Solanum tuberosum enhanced disease susceptibility 1 protein gene, complete cds Length = 2597 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 ttagcattgaagtcatcatc 610 |||||||||||||||||||| Sbjct: 2101 ttagcattgaagtcatcatc 2082
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatc 466 ||||||||||||||| |||||||| Sbjct: 31868234 cacaacaccaaagctgtagacatc 31868211
>emb|AL606992.3|OSJN00116 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L13, complete sequence Length = 143386 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatc 466 ||||||||||||||| |||||||| Sbjct: 9354 cacaacaccaaagctgtagacatc 9331
>gb|AC101455.9| Mus musculus chromosome 1, clone RP23-185E17, complete sequence Length = 185594 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tctgcattcatggtaccttc 199 |||||||||||||||||||| Sbjct: 99560 tctgcattcatggtaccttc 99541
>dbj|AP008246.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1642C07 Length = 206004 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 447 acaccaaagctatagacatcggccttttctgt 478 |||||||||||||| |||||| ||||||||| Sbjct: 115427 acaccaaagctataaacatcgctcttttctgt 115396
>gb|AC027290.31| Homo sapiens 12 BAC RP11-463O12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 177332 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ttttctcatttcacctgggg 77 |||||||||||||||||||| Sbjct: 60245 ttttctcatttcacctgggg 60264
>gb|AY796114.1| Lycopersicon esculentum clone Le_HBa 153G23 putative transposase, putative BAH domain-containing protein, putative permease I, putative pollen specific LIM domain-containing protein, putative betaine aldehyde dehyrogenase, EDS1, and putative ribosomal-protein S6 kinase-like protein genes, complete cds Length = 121127 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 591 ttagcattgaagtcatcatc 610 |||||||||||||||||||| Sbjct: 61532 ttagcattgaagtcatcatc 61513
>gb|AF070687.1|AF070687 Drosophila melanogaster cytoplasmic dynein intermediate chain isoform (Cdic) gene, complete cds; and axonemal dynein intermediate chain (Sdic) gene, partial cds Length = 13833 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 cttttctgtgatttgtgatg 489 |||||||||||||||||||| Sbjct: 4446 cttttctgtgatttgtgatg 4427
>gb|AC090826.15| Homo sapiens chromosome 15, clone CTD-2311M21, complete sequence Length = 169518 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 339 aagtgagcattcttcaccttttct 362 ||||||||||||||||||| |||| Sbjct: 157513 aagtgagcattcttcacctcttct 157536
>gb|BT004222.1| Arabidopsis thaliana clone RAFL15-25-J08 (R20792) At5g48740 mRNA, complete sequence Length = 2891 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 acaccaaagctatagacatc 466 |||||||||||||||||||| Sbjct: 2446 acaccaaagctatagacatc 2427
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagac 463 |||||||||||||||||||| Sbjct: 136030 acaacaccaaagctatagac 136011
>dbj|AP003250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443D08 Length = 146670 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 cacaacaccaaagctatagacatc 466 |||||||||||||||||| ||||| Sbjct: 20102 cacaacaccaaagctatacacatc 20125
>dbj|AP003686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0659D09 Length = 168253 Score = 40.1 bits (20), Expect = 8.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 434 ttccatgaccacaacaccaaagctatagacatcggccttttctgtgat 481 |||||| | |||||| ||||||||||| ||||| ||||||| ||||| Sbjct: 142452 ttccattatcacaacgccaaagctatacacatcaaccttttcagtgat 142405
>dbj|AP005767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0035G04 Length = 155636 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 tttctgtgatttgtgatgtt 491 |||||||||||||||||||| Sbjct: 15891 tttctgtgatttgtgatgtt 15910
>dbj|AP005780.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0051H02 Length = 136520 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 tttctgtgatttgtgatgtt 491 |||||||||||||||||||| Sbjct: 88702 tttctgtgatttgtgatgtt 88721
>dbj|AP005400.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0698G06 Length = 138282 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagac 463 |||||||||||||||||||| Sbjct: 52012 acaacaccaaagctatagac 51993
>dbj|AB012242.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K24G6 Length = 78973 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 acaccaaagctatagacatc 466 |||||||||||||||||||| Sbjct: 20749 acaccaaagctatagacatc 20768
>dbj|AK102670.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101P17, full insert sequence Length = 3031 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatc 466 ||||||||||||||| |||||||| Sbjct: 2234 cacaacaccaaagctgtagacatc 2211
>dbj|AK073571.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046G16, full insert sequence Length = 3140 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 acaacaccaaagctatagac 463 |||||||||||||||||||| Sbjct: 2452 acaacaccaaagctatagac 2433
>dbj|AK065470.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020L24, full insert sequence Length = 2391 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 cacaacaccaaagctatagacatc 466 |||||||||||||||||| ||||| Sbjct: 1714 cacaacaccaaagctatacacatc 1691
>dbj|AK065388.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022I17, full insert sequence Length = 2882 Score = 40.1 bits (20), Expect = 8.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 434 ttccatgaccacaacaccaaagctatagacatcggccttttctgtgat 481 |||||| | |||||| ||||||||||| ||||| ||||||| ||||| Sbjct: 2365 ttccattatcacaacgccaaagctatacacatcaaccttttcagtgat 2318
>gb|AE003572.4| Drosophila melanogaster chromosome X, section 67 of 74 of the complete sequence Length = 91383 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 cttttctgtgatttgtgatg 489 |||||||||||||||||||| Sbjct: 4109 cttttctgtgatttgtgatg 4128
>gb|AE003534.3| Drosophila melanogaster chromosome 3L, section 51 of 83 of the complete sequence Length = 263717 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 accaaagctatagacatcgg 468 |||||||||||||||||||| Sbjct: 95366 accaaagctatagacatcgg 95347
>gb|AC005666.1|AC005666 Homo sapiens chromosome 17, clone hRPK.112_H_10, complete sequence Length = 158905 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 tcttcaccttttcttccaac 368 |||||||||||||||||||| Sbjct: 89447 tcttcaccttttcttccaac 89466
>emb|AL928682.11| Mouse DNA sequence from clone RP23-143K9 on chromosome X, complete sequence Length = 135431 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 tgatacatgtgaagctagag 99 |||||||||||||||||||| Sbjct: 84356 tgatacatgtgaagctagag 84375
>emb|BX005036.6| Mouse DNA sequence from clone RP23-185E17 on chromosome 1, complete sequence Length = 185591 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tctgcattcatggtaccttc 199 |||||||||||||||||||| Sbjct: 99552 tctgcattcatggtaccttc 99533
>emb|AL078589.8|HS1126I14 Human DNA sequence from clone RP5-1126I14 on chromosome 6q16.1-16.3, complete sequence Length = 19544 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 gaggatgttttgtggtttga 633 |||||||||||||||||||| Sbjct: 13174 gaggatgttttgtggtttga 13193
>gb|AY885237.1| Homo sapiens sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A (SEMA7A) gene, complete cds Length = 27880 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 339 aagtgagcattcttcaccttttct 362 ||||||||||||||||||| |||| Sbjct: 15644 aagtgagcattcttcacctcttct 15621
>emb|AL844210.7| Mouse DNA sequence from clone RP23-235I13 on chromosome X, complete sequence Length = 140246 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 ttacataagaatatctcatg 26 |||||||||||||||||||| Sbjct: 91928 ttacataagaatatctcatg 91909
>emb|AL645586.9| Mouse DNA sequence from clone RP23-302O5 on chromosome X, complete sequence Length = 202500 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ctgatacatgtgaagctaga 98 |||||||||||||||||||| Sbjct: 62460 ctgatacatgtgaagctaga 62479
>gb|AC012435.13| Homo sapiens chromosome 15, clone RP11-10O17, complete sequence Length = 132994 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 339 aagtgagcattcttcaccttttct 362 ||||||||||||||||||| |||| Sbjct: 13283 aagtgagcattcttcacctcttct 13306 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,328,084 Number of Sequences: 3902068 Number of extensions: 6328084 Number of successful extensions: 124916 Number of sequences better than 10.0: 175 Number of HSP's better than 10.0 without gapping: 185 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 123748 Number of HSP's gapped (non-prelim): 1160 length of query: 646 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 623 effective length of database: 17,143,297,704 effective search space: 10680274469592 effective search space used: 10680274469592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
