ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags27b19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GLNE_XANAC (Q8PPY3) Glutamate-ammonia-ligase adenylyltransferase... 30 2.9
2GLNE_XANCP (Q8P4V7) Glutamate-ammonia-ligase adenylyltransferase... 28 8.4

>GLNE_XANAC (Q8PPY3) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)|
           ([Glutamate--ammonia-ligase] adenylyltransferase)
           (Glutamine-synthetase adenylyltransferase) (ATase)
          Length = 941

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +1

Query: 265 LRFSSIGTVGAGALSWTHLRQNQFQRKKGEDWQQKRYTGARSV 393
           LR    GT G  ALS+  +  +Q+ +++G DW++  +  AR+V
Sbjct: 224 LRLRPFGTAGRVALSFAGM--DQYFQREGRDWERYAWLKARAV 264



to top

>GLNE_XANCP (Q8P4V7) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)|
           ([Glutamate--ammonia-ligase] adenylyltransferase)
           (Glutamine-synthetase adenylyltransferase) (ATase)
          Length = 937

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = +1

Query: 265 LRFSSIGTVGAGALSWTHLRQNQFQRKKGEDWQQKRYTGARSV 393
           LR    G+ G  ALS+  +  +Q+ +++G DW++  +  AR+V
Sbjct: 223 LRLRPFGSAGRVALSFNGM--DQYFQREGRDWERYAWLKARAV 263


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,107,249
Number of Sequences: 219361
Number of extensions: 1156983
Number of successful extensions: 2379
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2379
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top