>ref|XM_464165.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1300

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 56/60 (93%), Gaps = 1/60 (1%)
 Strand = Plus / Minus

                                                                        
Query: 179  atgccctcaatctttctaaaagcaaagaatagagcaaacaaaaaatgagagtatgtacag 238
            |||||||  |||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 1233 atgccctacatctttctaaaagcaaagaatagagcaaac-aaaaatgagagtatttacag 1175

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 56/60 (93%), Gaps = 1/60 (1%)
 Strand = Plus / Minus

                                                                           
Query: 179     atgccctcaatctttctaaaagcaaagaatagagcaaacaaaaaatgagagtatgtacag 238
               |||||||  |||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 2658919 atgccctacatctttctaaaagcaaagaatagagcaaac-aaaaatgagagtatttacag 2658861



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                               
Query: 71      gggggaaacgctgttaccatcccaatacccta 102
               |||||||| |||||||||||||||||||||||
Sbjct: 2659025 gggggaaaagctgttaccatcccaatacccta 2658994

>dbj|AP005191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0479D12
          Length = 148362

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 56/60 (93%), Gaps = 1/60 (1%)
 Strand = Plus / Minus

                                                                         
Query: 179   atgccctcaatctttctaaaagcaaagaatagagcaaacaaaaaatgagagtatgtacag 238
             |||||||  |||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 61141 atgccctacatctttctaaaagcaaagaatagagcaaac-aaaaatgagagtatttacag 61083



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 71    gggggaaacgctgttaccatcccaatacccta 102
             |||||||| |||||||||||||||||||||||
Sbjct: 61247 gggggaaaagctgttaccatcccaatacccta 61216

>dbj|AK071342.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091H02, full
            insert sequence
          Length = 1298

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 56/60 (93%), Gaps = 1/60 (1%)
 Strand = Plus / Minus

                                                                        
Query: 179  atgccctcaatctttctaaaagcaaagaatagagcaaacaaaaaatgagagtatgtacag 238
            |||||||  |||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 1231 atgccctacatctttctaaaagcaaagaatagagcaaac-aaaaatgagagtatttacag 1173

>emb|CR932131.1|CNS0KY8G Paramecium tetraurelia macronuclear, alpha-tubulin-related protein
            gene
          Length = 3001

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 187  aatctttctaaaagcaaagaa 207
            |||||||||||||||||||||
Sbjct: 1280 aatctttctaaaagcaaagaa 1260

>gb|AC027088.8| Homo sapiens chromosome 15, clone RP11-809H16, complete sequence
          Length = 187712

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 204   agaatagagcaaacaaaaaat 224
             |||||||||||||||||||||
Sbjct: 96150 agaatagagcaaacaaaaaat 96170

>gb|DQ314884.1| Homo sapiens NADPH oxidase, EF-hand calcium binding domain 5 (NOX5)
             gene, complete cds
          Length = 128159

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 204   agaatagagcaaacaaaaaat 224
             |||||||||||||||||||||
Sbjct: 88993 agaatagagcaaacaaaaaat 88973

>gb|AC120085.5| Rattus norvegicus 10 BAC CH230-490B8 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 157493

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 403   agtaacaaacttcaaaaaga 422
             ||||||||||||||||||||
Sbjct: 99744 agtaacaaacttcaaaaaga 99725

>ref|XM_391503.1| Gibberella zeae PH-1 chromosome linkage group 14 hypothetical
           protein (FG11327.1) partial mRNA
          Length = 1086

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 274 tcttccatcggtactgtagg 293
           ||||||||||||||||||||
Sbjct: 550 tcttccatcggtactgtagg 531

>gb|CY009610.1| Influenza A virus (A/Wilson-Smith/33(H1N1)) segment 2, complete
           sequence
          Length = 2301

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 344 agaaaggggaagattggcaacaaa 367
           |||||||||||||| |||||||||
Sbjct: 151 agaaaggggaagatgggcaacaaa 174

>emb|AL118523.18|HSJ1031J8 Human DNA sequence from clone RP5-1031J8 on chromosome 20 Contains a
             putative novel gene, STSs and GSSs, complete sequence
          Length = 155213

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   caaagaatagagcaaacaaa 220
             ||||||||||||||||||||
Sbjct: 75795 caaagaatagagcaaacaaa 75776

>gb|AC164097.2| Mus musculus BAC clone RP23-141F18 from chromosome 16, complete
             sequence
          Length = 217725

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 196   aaaagcaaagaatagagcaaacaaaaaa 223
             ||||| |||||||||| |||||||||||
Sbjct: 74345 aaaagtaaagaatagaacaaacaaaaaa 74318

>emb|CR854907.6| Zebrafish DNA sequence from clone DKEYP-51H1 in linkage group 15,
             complete sequence
          Length = 187961

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   gcaaagaatagagcaaacaa 219
             ||||||||||||||||||||
Sbjct: 70050 gcaaagaatagagcaaacaa 70069

>gb|AC115540.3| Homo sapiens BAC clone RP11-629I23 from 4, complete sequence
          Length = 167483

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     atcccaataccctagcttcc 108
              ||||||||||||||||||||
Sbjct: 156502 atcccaataccctagcttcc 156483

>gb|AC079238.7| Homo sapiens BAC clone RP11-719L21 from 4, complete sequence
          Length = 142462

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   aaaagcaaagaatagagcaa 215
             ||||||||||||||||||||
Sbjct: 44466 aaaagcaaagaatagagcaa 44447

>ref|NG_002828.1| Homo sapiens mitochondrial ribosomal protein S5 pseudogene
           (LOC133332) on chromosome 4
          Length = 2524

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 aaaagcaaagaatagagcaa 215
           ||||||||||||||||||||
Sbjct: 622 aaaagcaaagaatagagcaa 641

>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome
          Length = 1992676

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 400    ttcagtaacaaacttcaaaaagaatcga 427
              |||| ||| |||||||||||||||||||
Sbjct: 716699 ttcaataaaaaacttcaaaaagaatcga 716672

>dbj|AB216795.1| Equus caballus DNA, microsatellite TKY2852
          Length = 235

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 346 aaaggggaagattggcaaca 365
           ||||||||||||||||||||
Sbjct: 160 aaaggggaagattggcaaca 141

>dbj|AB215821.1| Equus caballus DNA, microsatellite TKY1878
          Length = 202

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 346 aaaggggaagattggcaaca 365
           ||||||||||||||||||||
Sbjct: 89  aaaggggaagattggcaaca 70

>emb|AL845161.5| Mouse DNA sequence from clone RP23-214I20 on chromosome 2, complete
             sequence
          Length = 233212

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 200   gcaaagaatagagcaaacaaaaaa 223
             ||||||||||||||||| ||||||
Sbjct: 38523 gcaaagaatagagcaaaaaaaaaa 38546

>emb|AL731705.11| Mouse DNA sequence from clone RP23-72M11 on chromosome X, complete
              sequence
          Length = 119774

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 201    caaagaatagagcaaacaaaaaat 224
              |||| |||||||||||||||||||
Sbjct: 104558 caaataatagagcaaacaaaaaat 104581


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,294,653
Number of Sequences: 3902068
Number of extensions: 4294653
Number of successful extensions: 76177
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76093
Number of HSP's gapped (non-prelim): 80
length of query: 456
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 434
effective length of database: 17,147,199,772
effective search space: 7441884701048
effective search space used: 7441884701048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)