ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags27b13 |
|---|---|
| Clone Library Name | barley_pub |
>XP2_XENLA (P17437) Skin secretory protein xP2 precursor (APEG protein)| Length = 439 Score = 35.4 bits (80), Expect = 0.063 Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = -1 Query: 439 APKEGGIAA-ALKEGGVPAALKEGGISVVVAPKEGGVPVATKEGAAA 302 AP +GG A A EGG PA G + AP EGG P + GA A Sbjct: 74 APADGGAPAPAPAEGGAPAPAPAEGGAPAPAPAEGGAPAPAEGGAPA 120 Score = 30.0 bits (66), Expect = 2.7 Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 10/55 (18%) Frame = -1 Query: 439 APKEGGIAA---------ALKEGGVPAALKEGGISVVVAPKEGGVPV-ATKEGAA 305 AP EGG A A +GG PA G + AP EGG P A EG A Sbjct: 56 APAEGGAPAPAPAEGAEPAPADGGAPAPAPAEGGAPAPAPAEGGAPAPAPAEGGA 110 Score = 28.9 bits (63), Expect = 5.9 Identities = 24/47 (51%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Frame = -1 Query: 439 APKEGGI-AAALKEGGVPAALKEGGISVVVAPKEGGVPV-ATKEGAA 305 AP EGG A A EGG PA EGG + AP EG P A EG A Sbjct: 94 APAEGGAPAPAPAEGGAPAP-AEGG-APAPAPAEGEAPAPAPAEGEA 138 Score = 28.5 bits (62), Expect = 7.7 Identities = 19/46 (41%), Positives = 20/46 (43%) Frame = -1 Query: 439 APKEGGIAAALKEGGVPAALKEGGISVVVAPKEGGVPVATKEGAAA 302 AP EGG A G A EGG + AP EG P GA A Sbjct: 38 APAEGGAPAPAPAEGEAPAPAEGG-APAPAPAEGAEPAPADGGAPA 82
>NUPL1_DROME (Q9VDV3) Probable nucleoporin Nup58| Length = 546 Score = 35.4 bits (80), Expect = 0.063 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 17/63 (26%) Frame = +3 Query: 303 AAAPSFVATGTPPSLGATTTEMPPSFRAAGTP-----------------PSFRAAAMPPS 431 AA P+F A + P GAT+T P AA TP P+F AAA P+ Sbjct: 68 AATPAFGAPASTPGFGATSTAAPAFGTAAATPAFGIPAATSAFGAPAATPAFGAAAATPA 127 Query: 432 LGA 440 GA Sbjct: 128 FGA 130 Score = 32.3 bits (72), Expect = 0.54 Identities = 22/45 (48%), Positives = 24/45 (53%) Frame = +3 Query: 306 AAPSFVATGTPPSLGATTTEMPPSFRAAGTPPSFRAAAMPPSLGA 440 AA A G P ATTT PPSF AA + P+F AA SL A Sbjct: 15 AATGAFAFGARP---ATTTAPPPSFGAATSTPTFGAAPATTSLFA 56 Score = 31.2 bits (69), Expect = 1.2 Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 8/80 (10%) Frame = +3 Query: 225 TAKT*IGCGKIATSHVSANSQR*QPMAAAPSFVATGTPPSLGA--TTTEM------PPSF 380 T IG AT + ++ A PSF A + P+ GA TT + P+F Sbjct: 5 TTNNAIGGATAATGAFAFGARPATTTAPPPSFGAATSTPTFGAAPATTSLFAAPAATPAF 64 Query: 381 RAAGTPPSFRAAAMPPSLGA 440 A P+F A A P GA Sbjct: 65 GAPAATPAFGAPASTPGFGA 84 Score = 29.3 bits (64), Expect = 4.5 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = +3 Query: 303 AAAPSFVATGTPPSLGATTTEMPPSFRAAGT-PPSFRAAAMPPSLG 437 AA P+F A P+ GA + P F A T P+F AA P+ G Sbjct: 59 AATPAFGAPAATPAFGAPAS--TPGFGATSTAAPAFGTAAATPAFG 102
>ALL7_ASPFU (O42799) Allergen Asp f 7 precursor| Length = 270 Score = 33.1 bits (74), Expect = 0.31 Identities = 27/92 (29%), Positives = 37/92 (40%) Frame = +3 Query: 144 TPTPGLKPEELQPKEIRFTD*ATHKPCTAKT*IGCGKIATSHVSANSQR*QPMAAAPSFV 323 TPTP PE+ +P E T T + +A + +A+S P AP Sbjct: 69 TPTPSAAPEQAEPIETSTQPETTKSQPTQPSVATFIPVAAAAAAADSAAPIPEEPAPQPA 128 Query: 324 ATGTPPSLGATTTEMPPSFRAAGTPPSFRAAA 419 T P + +TTT+ PS A S AA Sbjct: 129 TTAAPST--STTTQAAPSAPPAANSGSTEKAA 158
>PRRT1_MOUSE (O35449) Proline-rich transmembrane protein 1| Length = 306 Score = 32.7 bits (73), Expect = 0.41 Identities = 34/115 (29%), Positives = 44/115 (38%), Gaps = 14/115 (12%) Frame = +3 Query: 126 YLAPILTPTPGLKPEELQPKEIRFTD*ATHKPCTAKT*-IGCGKIATSHVSA------NS 284 Y AP P + P + P H+ TA +G G +A++ SA ++ Sbjct: 20 YNAPQPPAEPPIPPPQTAPSSHHHHHHHYHQSGTATLPRLGAGGLASAAASAQRGPSSSA 79 Query: 285 QR*QPMAAAPSFVATGTPPSLGATTTEMPPS-------FRAAGTPPSFRAAAMPP 428 +P AP A G PP AT MPP F PP AAA PP Sbjct: 80 TLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPPAAAAPPP 134
>MPA5B_LOLPR (Q40237) Major pollen allergen Lol p 5b precursor (Lol p Vb)| Length = 339 Score = 32.0 bits (71), Expect = 0.70 Identities = 17/45 (37%), Positives = 21/45 (46%) Frame = +3 Query: 306 AAPSFVATGTPPSLGATTTEMPPSFRAAGTPPSFRAAAMPPSLGA 440 A P+ AT TP AT T P + A TP + A A P + A Sbjct: 285 ATPAAAATATPTPAAATATATPAAAYATATPAAATATATPAAATA 329
>PRRT1_HUMAN (Q99946) Proline-rich transmembrane protein 1| Length = 306 Score = 31.6 bits (70), Expect = 0.91 Identities = 34/115 (29%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Frame = +3 Query: 126 YLAPILTPTPGLKPEELQPKEIRFTD*ATHKPCTAKT*-IGCGKIATSHVSA------NS 284 Y AP P P + P H+ TA +G G +A+S +A ++ Sbjct: 20 YNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQRGPSSSA 79 Query: 285 QR*QPMAAAPSFVATGTPPSLGATTTEMPPS-------FRAAGTPPSFRAAAMPP 428 +P AP A G PP AT MPP F PP AAA PP Sbjct: 80 TLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPPAAAAPPP 134
>DVL3_HUMAN (Q92997) Segment polarity protein dishevelled homolog DVL-3| (Dishevelled-3) (DSH homolog 3) Length = 716 Score = 30.8 bits (68), Expect = 1.6 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Frame = +3 Query: 312 PSFVATGTPPSLGATTTEMPPSFRA---AGTPPSFRAAAMPPSLGA 440 PS+ G PP G MPP A G PP A++PP L A Sbjct: 651 PSYGPPGVPPLYGPPMLMMPPPPAAMGPPGAPPGRDLASVPPELTA 696
>NSP1_YEAST (P14907) Nucleoporin NSP1 (Nuclear pore protein NSP1)| (Nucleoskeletal-like protein) (p110) Length = 823 Score = 30.4 bits (67), Expect = 2.0 Identities = 20/47 (42%), Positives = 24/47 (51%) Frame = +2 Query: 302 GRSTFFCSNWDATFFGSNNNRDATFFQGSRDTTFFQGSSDATFFGSN 442 G + F SN + FGSNN+ TF S T+ F GSS A SN Sbjct: 70 GNTAFGNSNPTSNVFGSNNSTTNTFGSNSAGTSLF-GSSSAQQTKSN 115
>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1185 Score = 30.4 bits (67), Expect = 2.0 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 10/52 (19%) Frame = +3 Query: 300 MAAAPSFVATGTPP----------SLGATTTEMPPSFRAAGTPPSFRAAAMP 425 +A++P+ T +PP S GA T PP ++ G+PPSFR P Sbjct: 616 VASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKP-GSPPSFRTGTPP 666
>SYA_BDEBA (P61698) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 907 Score = 30.4 bits (67), Expect = 2.0 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = +1 Query: 145 HPPQASSLKNCSQRRFDLPTEQPINHVQQKRESDVEKSQHRMCRP 279 H QA SL + + RFD +P++ + K+ D+ Q C P Sbjct: 598 HVTQAGSLVDSQKTRFDFTHNKPVSSEEIKKIEDLVNEQIARCNP 642
>ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1186 Score = 30.4 bits (67), Expect = 2.0 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 10/52 (19%) Frame = +3 Query: 300 MAAAPSFVATGTPP----------SLGATTTEMPPSFRAAGTPPSFRAAAMP 425 +A++P+ T +PP S GA T PP ++ G+PPSFR P Sbjct: 617 VASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKP-GSPPSFRTGTPP 667
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 30.0 bits (66), Expect = 2.7 Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 1/76 (1%) Frame = +3 Query: 213 HKPCTAKT*IGCGKIATSHVSANSQR*QPMAAAPSFVATGTPPSLGATTTEMPPSFRAAG 392 H CTA T G + T+H++ S TGT + ATT S A Sbjct: 2208 HTVCTAWTSATSGILGTTHITEPS--------------TGTSHTPAATTGTTQHSTPALS 2253 Query: 393 TP-PSFRAAAMPPSLG 437 +P PS R PPS G Sbjct: 2254 SPHPSSRTTESPPSPG 2269 Score = 28.9 bits (63), Expect = 5.9 Identities = 30/117 (25%), Positives = 41/117 (35%), Gaps = 21/117 (17%) Frame = +3 Query: 144 TPTPGLKPEELQPKEIRFTD*ATHKPC---TAKT*IGCGKIATSHVSANSQR*QPMAAAP 314 T TP + + P I T TH P T T + G +AT S + Sbjct: 2080 TTTPTTRGSTVTPSSIPGT---THTPTVLTTTTTTVATGSMATPSSSTQT---------- 2126 Query: 315 SFVATGTPPSLGAT------------------TTEMPPSFRAAGTPPSFRAAAMPPS 431 +GTPPSL T TT +PP T P+ ++ + PS Sbjct: 2127 ----SGTPPSLTTTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAATSSTVTPS 2179
>Y2082_MYCTU (Q10690) Hypothetical protein Rv2082| Length = 721 Score = 30.0 bits (66), Expect = 2.7 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%) Frame = +3 Query: 336 PPSLGATTTEMPPSFRAAGT-PPSFRAAAMPPSLGA 440 PP G + +PPS A G PS AA MPP+ A Sbjct: 269 PPPPGTVSPPLPPSAPAVGVGGPSVPAAGMPPAAAA 304
>MDS3_YEAST (P53094) Negative regulator of sporulation MDS3 (MCK1 dosage| suppressor 3) Length = 1487 Score = 30.0 bits (66), Expect = 2.7 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = +3 Query: 264 SHVSANS-QR*QPMAAAPSFVATGTPPSLGATTTEMPPSFRAAGTPP 401 S+VS++S +R +++ + + GTPP LG +PP R PP Sbjct: 830 SYVSSSSDRRGNSISSRSTSDSFGTPPVLGVLNVPLPPQTREPNEPP 876
>HAND1_HUMAN (O96004) Heart- and neural crest derivatives-expressed protein 1| (Extraembryonic tissues, heart, autonomic nervous system and neural crest derivatives-expressed protein 1) (eHAND) Length = 215 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/39 (38%), Positives = 17/39 (43%) Frame = +3 Query: 297 PMAAAPSFVATGTPPSLGATTTEMPPSFRAAGTPPSFRA 413 P AAP F A G PP+ A T P R +P A Sbjct: 49 PADAAPDFPAGGPPPAAAAAATAYGPDARPGQSPGRLEA 87
>KRA45_HUMAN (Q9BYR2) Keratin-associated protein 4-5 (Keratin-associated protein| 4.5) (Ultrahigh sulfur keratin-associated protein 4.5) Length = 186 Score = 29.6 bits (65), Expect = 3.5 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 3/49 (6%) Frame = -3 Query: 362 CC---CCSQRRWRPSCYKRRCCGHGLLALGVGRHMRCCDFSTSDSRFCC 225 CC CC RPSC K +CC + H CC S+ +CC Sbjct: 25 CCQTTCCRTTCCRPSCCKPQCC-QSVCYQPTCCHPSCC-ISSCCRPYCC 71
>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)| Length = 1431 Score = 29.3 bits (64), Expect = 4.5 Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 4/72 (5%) Frame = +3 Query: 216 KPCTAKT*IGCGKIATSHVSANSQR*QPMAAAPSFVATGTPPSLGATTTEMP----PSFR 383 KP A + G S A S QP AA GTPPSLGA+ + P P+ Sbjct: 1282 KPVKAVAGLPSGSAGPS--PAPSPARQPPAALAK--PPGTPPSLGASPAKPPSPGAPALH 1337 Query: 384 AAGTPPSFRAAA 419 PP AAA Sbjct: 1338 VPAKPPRAAAAA 1349
>KRA47_HUMAN (Q9BYR0) Keratin-associated protein 4-7 (Keratin-associated protein| 4.7) (Ultrahigh sulfur keratin-associated protein 4.7) Length = 210 Score = 29.3 bits (64), Expect = 4.5 Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 3/49 (6%) Frame = -3 Query: 362 CC---CCSQRRWRPSCYKRRCCGHGLLALGVGRHMRCCDFSTSDSRFCC 225 CC CC RPSC + CC H RCC S+ CC Sbjct: 54 CCQSVCCQPTCCRPSCCETTCC-----------HPRCC-ISSCCRPSCC 90
>KRA49_HUMAN (Q9BYQ8) Keratin-associated protein 4-9 (Keratin-associated protein| 4.9) (Ultrahigh sulfur keratin-associated protein 4.9) (Fragment) Length = 191 Score = 29.3 bits (64), Expect = 4.5 Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 3/49 (6%) Frame = -3 Query: 362 CC---CCSQRRWRPSCYKRRCCGHGLLALGVGRHMRCCDFSTSDSRFCC 225 CC CC RPSC + CC H RCC S+ CC Sbjct: 75 CCQPVCCQPTCCRPSCCETTCC-----------HPRCC-ISSCCRPSCC 111
>FPG_BRUSU (Q8FXR6) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)| (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM) Length = 292 Score = 29.3 bits (64), Expect = 4.5 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +2 Query: 257 RNIACVGQLPTLAAHGRSTFFCSN 328 RN AC G + + GRSTFFC++ Sbjct: 266 RNPACGGTVERVVQSGRSTFFCAS 289
>FPG_BRUME (Q8YED2) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)| (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM) Length = 292 Score = 29.3 bits (64), Expect = 4.5 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +2 Query: 257 RNIACVGQLPTLAAHGRSTFFCSN 328 RN AC G + + GRSTFFC++ Sbjct: 266 RNPACGGTVERVVQSGRSTFFCAS 289
>FPG_BRUAB (Q57A83) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)| (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM) Length = 292 Score = 29.3 bits (64), Expect = 4.5 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +2 Query: 257 RNIACVGQLPTLAAHGRSTFFCSN 328 RN AC G + + GRSTFFC++ Sbjct: 266 RNPACGGTVERVVQSGRSTFFCAS 289
>FPG_BRUA2 (Q2YQP8) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)| (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM) Length = 292 Score = 29.3 bits (64), Expect = 4.5 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +2 Query: 257 RNIACVGQLPTLAAHGRSTFFCSN 328 RN AC G + + GRSTFFC++ Sbjct: 266 RNPACGGTVERVVQSGRSTFFCAS 289
>SDK_DROME (O97394) Protein sidekick precursor| Length = 2224 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = +3 Query: 222 CTAKT*IGCGKIATSHVSANSQR*QPMA 305 CTA+T +G GKIAT+ V + R +P A Sbjct: 1447 CTAQTRLGWGKIATALVYTTNNRERPQA 1474
>TIPT_DROME (Q9U3V5) Protein tiptop| Length = 1024 Score = 29.3 bits (64), Expect = 4.5 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = +3 Query: 264 SHVSANSQR*QPMAAAPSFVATGTPPSLGATTTEMPPSFRAAGTPPS 404 S VSA + P+AA T PPS G + S A+ T PS Sbjct: 848 SSVSAQKPKAHPLAALQKLCETTDPPSTGLRSASSAGSSTASATLPS 894
>ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1183 Score = 29.3 bits (64), Expect = 4.5 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 10/52 (19%) Frame = +3 Query: 300 MAAAPSFVATGTPP----------SLGATTTEMPPSFRAAGTPPSFRAAAMP 425 +A++P+ T +PP S G+ T PP ++ G+PPSFR P Sbjct: 614 VASSPAGYKTASPPGPPQYSKRAPSPGSYKTATPPGYKP-GSPPSFRTGTPP 664
>CN032_PONPY (Q5R623) Protein C14orf32 homolog| Length = 245 Score = 29.3 bits (64), Expect = 4.5 Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 7/49 (14%) Frame = +3 Query: 306 AAPSFVATGTPPS-------LGATTTEMPPSFRAAGTPPSFRAAAMPPS 431 +APS V +G PPS G T M PS G PP A PPS Sbjct: 44 SAPSSVPSGLPPSATPSTVPFGPAPTGMYPSVPPTGPPPG-PPAPFPPS 91
>CN032_HUMAN (Q8NDC0) Protein C14orf32| Length = 245 Score = 29.3 bits (64), Expect = 4.5 Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 7/49 (14%) Frame = +3 Query: 306 AAPSFVATGTPPS-------LGATTTEMPPSFRAAGTPPSFRAAAMPPS 431 +APS V +G PPS G T M PS G PP A PPS Sbjct: 44 SAPSSVPSGLPPSATPSTVPFGPAPTGMYPSVPPTGPPPG-PPAPFPPS 91
>TILS_CHRVO (Q7NT72) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 435 Score = 28.9 bits (63), Expect = 5.9 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = -1 Query: 427 GGIAAALKEGGVPAALKEGGISVVVAPKEGGVPVATKEG 311 G +A ++ GVPAAL E G +AP+ GG ++ + G Sbjct: 341 GELAWERRDAGVPAALLESG--AYLAPRRGGEKLSARVG 377
>GPR64_HUMAN (Q8IZP9) G-protein coupled receptor 64 precursor| (Epididymis-specific protein 6) (He6 receptor) Length = 1017 Score = 28.9 bits (63), Expect = 5.9 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +3 Query: 294 QPMAAAPSFVATGTPPSLGATTTEMPPSFRAAGTPPSFRAAAMPPSLGA 440 QP A S A PP ++ MP + +GTPP +A+ P++ A Sbjct: 305 QPSAPIASSPAIDMPPQSETISSPMPQT-HVSGTPPPVKASFSSPTVSA 352
>GLNE_RALSO (Q8XW19) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)| ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) Length = 955 Score = 28.9 bits (63), Expect = 5.9 Identities = 11/35 (31%), Positives = 22/35 (62%) Frame = +1 Query: 145 HPPQASSLKNCSQRRFDLPTEQPINHVQQKRESDV 249 H P+ +L S++RFDL + ++H ++ ++DV Sbjct: 505 HSPRYRALSEVSRQRFDLLINRALDHAARQTDADV 539
>ELN_MOUSE (P54320) Elastin precursor (Tropoelastin)| Length = 860 Score = 28.9 bits (63), Expect = 5.9 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Frame = -1 Query: 427 GGIAAALKEGGVPAALKEGGISVVVAPKEG----GVPVATKEGAAA 302 GGI + GGVP + GG++ + A G G P A K A A Sbjct: 555 GGIPGGVGVGGVPGGVGPGGVTGIGAGPGGLGGAGSPAAAKSAAKA 600
>YRM6_CAEEL (Q09602) Hypothetical homeobox protein R06F6.6 in chromosome II| Length = 416 Score = 28.9 bits (63), Expect = 5.9 Identities = 19/58 (32%), Positives = 28/58 (48%) Frame = +3 Query: 258 ATSHVSANSQR*QPMAAAPSFVATGTPPSLGATTTEMPPSFRAAGTPPSFRAAAMPPS 431 A++H S NS+R P + S TP AT +MP + A P + +A PP+ Sbjct: 194 ASNHTS-NSRRSSPSRKSSS---DSTPTPTQATQFDMPTQIQTASPPTTADSAIFPPT 247
>SALM_DROVI (P39806) Homeotic protein spalt-major| Length = 1402 Score = 28.9 bits (63), Expect = 5.9 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 7/46 (15%) Frame = +3 Query: 324 ATGTPPSLGATTTEMPPSFRAAGTP--PSFRAAAMPP-----SLGA 440 ATG PP +T T+M PS A +P P PP SLGA Sbjct: 524 ATGLPPPSTSTLTQMQPSMSFASSPAFPGLPGIYRPPMELLKSLGA 569
>TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic| serine protease) (Membrane-type mosaic serine protease) Length = 581 Score = 28.9 bits (63), Expect = 5.9 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Frame = +3 Query: 264 SHVSANSQR*QPMAAAPSFVA-TGTPPSLGATTTEMPPSFRAAGTPPSFRAAAMPPSLG 437 SH +A+ R A+P+ + GTPP + P AGTPP + A G Sbjct: 5 SHGNASPARTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAG 63
>KR414_HUMAN (Q9BYQ6) Keratin-associated protein 4-14 (Keratin-associated| protein 4.14) (Ultrahigh sulfur keratin-associated protein 4.14) Length = 195 Score = 28.9 bits (63), Expect = 5.9 Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 7/53 (13%) Frame = -3 Query: 362 CC---CCSQRRWRPSCYKRRCCGHGLLALGVGRHMRC----CDFSTSDSRFCC 225 CC CC RP C R CG GV H C C S+ CC Sbjct: 144 CCRPSCCESSCCRPCCCLRPVCG------GVSCHTTCYRPTCVISSCPRPLCC 190
>KRA59_HUMAN (P26371) Keratin-associated protein 5-9 (Keratin-associated protein| 5.9) (Ultrahigh sulfur keratin-associated protein 5.9) (Keratin, cuticle, ultrahigh sulfur 1) (Keratin, ultra high-sulfur matrix protein A) (UHS keratin A) (UHS KerA) Length = 169 Score = 28.5 bits (62), Expect = 7.7 Identities = 18/59 (30%), Positives = 21/59 (35%), Gaps = 5/59 (8%) Frame = -3 Query: 362 CC--CCSQRRWRPSCYKRRCCGHGLLALGVGR---HMRCCDFSTSDSRFCCTWFMGCSV 201 CC CCS SC + CC + G G CC S SR C C + Sbjct: 111 CCKPCCSSSGRGSSCCQSSCCKPCCSSSGCGSSCCQSSCCKPCCSQSRCCVPVCYQCKI 169
>TNR18_HUMAN (Q9Y5U5) Tumor necrosis factor receptor superfamily member 18| precursor (Glucocorticoid-induced TNFR-related protein) (Activation-inducible TNFR family receptor) Length = 241 Score = 28.5 bits (62), Expect = 7.7 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = -3 Query: 308 CGHGLLALGVGRHMRCCDFSTSDSRFCCTWFMG 210 CG G L LG G RCC T+ CC + G Sbjct: 34 CGPGRLLLGTGTDARCCRVHTTR---CCRDYPG 63
>CD248_HUMAN (Q9HCU0) Endosialin precursor (Tumor endothelial marker 1) (CD248| antigen) Length = 757 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/46 (32%), Positives = 21/46 (45%) Frame = +3 Query: 294 QPMAAAPSFVATGTPPSLGATTTEMPPSFRAAGTPPSFRAAAMPPS 431 QP A P ++T P A + M P R AGT + +PP+ Sbjct: 508 QPPAHQPPMISTKYPELFPAHQSPMFPDTRVAGTQTTTHLPGIPPN 553
>FETA_RAT (P02773) Alpha-fetoprotein precursor (Alpha-fetoglobulin)| (Alpha-1-fetoprotein) Length = 611 Score = 28.5 bits (62), Expect = 7.7 Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 13/63 (20%) Frame = -3 Query: 362 CCCCSQRRWRPSCYKRRCCGHGLLALGVG----RHM---------RCCDFSTSDSRFCCT 222 CC S+ KR CG GL + +G RH CC S S+ R C T Sbjct: 463 CCQLSEE-------KRSACGEGLADIYIGHLCLRHEANPVNSGINHCCSSSYSNRRLCIT 515 Query: 221 WFM 213 F+ Sbjct: 516 SFL 518
>RECR_GLOVI (Q7NFM5) Recombination protein recR| Length = 197 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 7/44 (15%) Frame = +3 Query: 81 VVMEPKDY-----TVNYKGLY--LAPILTPTPGLKPEELQPKEI 191 VV EP+D T +KG Y L ++ P G+ PE+L+ KE+ Sbjct: 83 VVAEPRDLVAIERTREFKGHYHVLGGLINPMEGIGPEQLRIKEL 126
>MFRP_HUMAN (Q9BY79) Membrane frizzled-related protein (Membrane-type| frizzled-related protein) Length = 579 Score = 28.5 bits (62), Expect = 7.7 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Frame = +3 Query: 294 QPMAAAPSFVATGTPPSLGATTTEMPPSF---RAAGTPPSFRAAAMPPS 431 Q AA PS + P+ G TTT P+ +AAGTP + + + PS Sbjct: 91 QLQAAPPSGASHSPLPAGGLTTTTTTPTITTSQAAGTPKGQQESGVSPS 139
>KR412_HUMAN (Q9BQ66) Keratin-associated protein 4-12 (Keratin-associated| protein 4.12) (Ultrahigh sulfur keratin-associated protein 4.12) Length = 201 Score = 28.5 bits (62), Expect = 7.7 Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 6/52 (11%) Frame = -3 Query: 362 CC--CCSQRRWRPSCYKRRCCGHGLLALGVGRHMRC----CDFSTSDSRFCC 225 CC CC RP C R CG V H C C ST CC Sbjct: 151 CCPSCCESSCCRPCCCLRPVCGR------VSCHTTCYRPTCVISTCPRPLCC 196
>VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane antigen) (MA)| Length = 907 Score = 28.5 bits (62), Expect = 7.7 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = +1 Query: 199 PTEQPINHVQQKRESDVEKSQHRMCRPTPNASSPWP 306 P+ P ++ + + D+ S + PTPNA+SP P Sbjct: 490 PSPSPWDNGTESKAPDMTSSTSPVTTPTPNATSPTP 525
>CIC_DROME (Q9U1H0) Putative transcription factor capicua (Protein fettucine)| Length = 1403 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Frame = +3 Query: 297 PMAAAPSFVATGTPPSLGATTTEMPPSFRAAGTPPSFRAAAM--PPSLG 437 P++A P+ + G PPS G PS+++ + P M PP G Sbjct: 978 PVSAQPTMLLHGYPPSHGVEPPARSPSYKSMPSTPKSATYLMSAPPERG 1026
>PRDM2_RAT (Q63755) PR domain zinc finger protein 2 (PR domain-containing| protein 2) (Retinoblastoma protein-interacting zinc-finger protein) (Zinc finger protein RIZ) Length = 1706 Score = 28.5 bits (62), Expect = 7.7 Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 2/103 (1%) Frame = +3 Query: 135 PILTPTPGLKPEELQPKEIRFTD*ATHKPCTAKT*IGCGKIATSHVSANSQR*QPMAAAP 314 PIL+PT P + P E + + P + + +S S+ S P++A Sbjct: 1013 PILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSSSSSSFPSSSCSSTSPSPPPLSAVS 1072 Query: 315 SFVATG--TPPSLGATTTEMPPSFRAAGTPPSFRAAAMPPSLG 437 S V++G SL A T + S + G P A PP+ G Sbjct: 1073 SVVSSGDNLEASLPAVTFKQEES-ESEGLKPKEEA---PPAGG 1111 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,606,522 Number of Sequences: 219361 Number of extensions: 1402959 Number of successful extensions: 5693 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 5026 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5600 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
