ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags27b13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_465156.2| Oryza sativa (japonica cultivar-group), mRNA 58 3e-05
2ref|XM_507470.1| PREDICTED Oryza sativa (japonica cultivar-group... 58 3e-05
3ref|XM_465155.1| Oryza sativa (japonica cultivar-group), mRNA 58 3e-05
4ref|XM_507469.1| PREDICTED Oryza sativa (japonica cultivar-group... 58 3e-05
5ref|XM_506781.2| PREDICTED Oryza sativa (japonica cultivar-group... 58 3e-05
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
7dbj|AP005743.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
8dbj|AK099254.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
9dbj|AK072860.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
10ref|XM_507600.1| PREDICTED Oryza sativa (japonica cultivar-group... 56 1e-04
11ref|XM_483517.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
12ref|XM_507599.1| PREDICTED Oryza sativa (japonica cultivar-group... 56 1e-04
13ref|XM_507307.2| PREDICTED Oryza sativa (japonica cultivar-group... 56 1e-04
14ref|XM_483511.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
15dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
16dbj|AP005528.2| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
17dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
18dbj|AK109343.2| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
19dbj|AK101015.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
20dbj|AK066926.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
21dbj|AK061777.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
22gb|AY106707.1| Zea mays PCO115444 mRNA sequence 44 0.38
23emb|AL157397.14| Human DNA sequence from clone RP11-438P12 on ch... 42 1.5
24emb|BX465210.7| Zebrafish DNA sequence from clone CH211-266A5 in... 42 1.5
25gb|AC005077.5| Homo sapiens BAC clone CTA-228D17 from 7, complet... 40 5.9
26gb|AC125114.3| Mus musculus BAC clone RP24-254M13 from chromosom... 40 5.9
27gb|AC126026.4| Mus musculus BAC clone RP24-486A17 from chromosom... 40 5.9
28gb|AC105407.5| Mus musculus BAC clone RP24-196J17 from 13, compl... 40 5.9
29emb|AL390059.10| Human DNA sequence from clone RP11-399E10 on ch... 40 5.9
30emb|AL442643.2| Human DNA sequence from clone RP11-564H19 on chr... 40 5.9
31gb|AC182768.3| Pan troglodytes BAC clone CH251-178I17 from chrom... 40 5.9
32gb|AC114941.2| Homo sapiens chromosome 5 clone CTD-2287M17, comp... 40 5.9
33gb|AC145375.5| Pan troglodytes BAC clone RP43-57M5 from chromoso... 40 5.9
34ref|XM_226546.3| PREDICTED: Rattus norvegicus similar to Galacto... 40 5.9
35gb|AF211184.1|AF211184 Hylobates sp. growth hormone receptor (GH... 40 5.9
36gb|AF210633.1|AF210633 Homo sapiens growth hormone receptor (GHR... 40 5.9
37gb|AF211185.1|AF211185 Pongo pygmaeus growth hormone receptor (G... 40 5.9
38gb|AF209082.1|AF209082 Pan troglodytes growth hormone receptor (... 40 5.9
39gb|AF155912.1|AF155912 Homo sapiens growth hormone receptor (GHR... 40 5.9
40dbj|BS000029.1| Pan troglodytes chromosome 22 clone:RP43-172K02,... 40 5.9
41emb|AL163213.2|HS21C013 Homo sapiens chromosome 21 segment HS21C013 40 5.9
42gb|AC005516.1|AC005516 Homo sapiens Chromosome 4p16.3 BAC clone ... 40 5.9
43tpe|BN000741.1| TPA: TPA_inf: Rattus norvegicus mRNA for galacto... 40 5.9
44emb|Z68756.1|HSL191F1 Human DNA sequence from clone LA04NC01-191... 40 5.9
45gb|AC092145.2| Homo sapiens chromosome 16 clone RP11-61F12, comp... 40 5.9
46dbj|AP000473.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 5.9 
>ref|XM_465156.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1556

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                             
Query: 103  atacagtcaactataagggactatatctcgcaccaatattaacacccac 151
            ||||||||||||||||  |  ||||||||||||||||||||||||||||
Sbjct: 1463 atacagtcaactataacagg-tatatctcgcaccaatattaacacccac 1416
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>ref|XM_507470.1| PREDICTED Oryza sativa (japonica cultivar-group), P0543C11.17-3 mRNA
          Length = 1696

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                             
Query: 103  atacagtcaactataagggactatatctcgcaccaatattaacacccac 151
            ||||||||||||||||  |  ||||||||||||||||||||||||||||
Sbjct: 1506 atacagtcaactataacagg-tatatctcgcaccaatattaacacccac 1459
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>ref|XM_465155.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1603

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                             
Query: 103  atacagtcaactataagggactatatctcgcaccaatattaacacccac 151
            ||||||||||||||||  |  ||||||||||||||||||||||||||||
Sbjct: 1510 atacagtcaactataacagg-tatatctcgcaccaatattaacacccac 1463
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>ref|XM_507469.1| PREDICTED Oryza sativa (japonica cultivar-group), P0543C11.17-3 mRNA
          Length = 1611

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                             
Query: 103  atacagtcaactataagggactatatctcgcaccaatattaacacccac 151
            ||||||||||||||||  |  ||||||||||||||||||||||||||||
Sbjct: 1513 atacagtcaactataacagg-tatatctcgcaccaatattaacacccac 1466
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>ref|XM_506781.2| PREDICTED Oryza sativa (japonica cultivar-group), P0543C11.17-3 mRNA
          Length = 1637

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                             
Query: 103  atacagtcaactataagggactatatctcgcaccaatattaacacccac 151
            ||||||||||||||||  |  ||||||||||||||||||||||||||||
Sbjct: 1544 atacagtcaactataacagg-tatatctcgcaccaatattaacacccac 1497
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                                 
Query: 103      atacagtcaactataagggactatatctcgcaccaatattaacacccac 151
                ||||||||||||||||  |  ||||||||||||||||||||||||||||
Sbjct: 11966873 atacagtcaactataacagg-tatatctcgcaccaatattaacacccac 11966826
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>dbj|AP005743.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0543C11
          Length = 159075

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                              
Query: 103   atacagtcaactataagggactatatctcgcaccaatattaacacccac 151
             ||||||||||||||||  |  ||||||||||||||||||||||||||||
Sbjct: 64151 atacagtcaactataacagg-tatatctcgcaccaatattaacacccac 64104
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>dbj|AK099254.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163I06, full
            insert sequence
          Length = 1696

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                             
Query: 103  atacagtcaactataagggactatatctcgcaccaatattaacacccac 151
            ||||||||||||||||  |  ||||||||||||||||||||||||||||
Sbjct: 1506 atacagtcaactataacagg-tatatctcgcaccaatattaacacccac 1459
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>dbj|AK072860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143I03, full
            insert sequence
          Length = 1636

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                             
Query: 103  atacagtcaactataagggactatatctcgcaccaatattaacacccac 151
            ||||||||||||||||  |  ||||||||||||||||||||||||||||
Sbjct: 1543 atacagtcaactataacagg-tatatctcgcaccaatattaacacccac 1496
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>ref|XM_507600.1| PREDICTED Oryza sativa (japonica cultivar-group), P0702C09.23 mRNA
          Length = 1696

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                        
Query: 124  tatatctcgcaccaatattaacacccac 151
            ||||||||||||||||||||||||||||
Sbjct: 1486 tatatctcgcaccaatattaacacccac 1459
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>ref|XM_483517.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1603

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                        
Query: 124  tatatctcgcaccaatattaacacccac 151
            ||||||||||||||||||||||||||||
Sbjct: 1490 tatatctcgcaccaatattaacacccac 1463
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>ref|XM_507599.1| PREDICTED Oryza sativa (japonica cultivar-group), P0702C09.23 mRNA
          Length = 1642

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                        
Query: 124  tatatctcgcaccaatattaacacccac 151
            ||||||||||||||||||||||||||||
Sbjct: 1528 tatatctcgcaccaatattaacacccac 1501
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>ref|XM_507307.2| PREDICTED Oryza sativa (japonica cultivar-group), P0702C09.23 mRNA
          Length = 1645

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                        
Query: 124  tatatctcgcaccaatattaacacccac 151
            ||||||||||||||||||||||||||||
Sbjct: 1532 tatatctcgcaccaatattaacacccac 1505
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>ref|XM_483511.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1679

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                        
Query: 124  tatatctcgcaccaatattaacacccac 151
            ||||||||||||||||||||||||||||
Sbjct: 1566 tatatctcgcaccaatattaacacccac 1539
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                            
Query: 124      tatatctcgcaccaatattaacacccac 151
                ||||||||||||||||||||||||||||
Sbjct: 26686748 tatatctcgcaccaatattaacacccac 26686721



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                            
Query: 124      tatatctcgcaccaatattaacacccac 151
                ||||||||||||||||||||||||||||
Sbjct: 26648429 tatatctcgcaccaatattaacacccac 26648402
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>dbj|AP005528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0702C09
          Length = 138203

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                         
Query: 124   tatatctcgcaccaatattaacacccac 151
             ||||||||||||||||||||||||||||
Sbjct: 98275 tatatctcgcaccaatattaacacccac 98248



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                         
Query: 124   tatatctcgcaccaatattaacacccac 151
             ||||||||||||||||||||||||||||
Sbjct: 59956 tatatctcgcaccaatattaacacccac 59929
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>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0033D24
          Length = 186132

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                         
Query: 124   tatatctcgcaccaatattaacacccac 151
             ||||||||||||||||||||||||||||
Sbjct: 30090 tatatctcgcaccaatattaacacccac 30063
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>dbj|AK109343.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-G11, full
            insert sequence
          Length = 1603

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                        
Query: 124  tatatctcgcaccaatattaacacccac 151
            ||||||||||||||||||||||||||||
Sbjct: 1490 tatatctcgcaccaatattaacacccac 1463
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>dbj|AK101015.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149C09, full
            insert sequence
          Length = 1679

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                        
Query: 124  tatatctcgcaccaatattaacacccac 151
            ||||||||||||||||||||||||||||
Sbjct: 1566 tatatctcgcaccaatattaacacccac 1539
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>dbj|AK066926.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091O05, full
            insert sequence
          Length = 1942

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                        
Query: 124  tatatctcgcaccaatattaacacccac 151
            ||||||||||||||||||||||||||||
Sbjct: 1829 tatatctcgcaccaatattaacacccac 1802
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>dbj|AK061777.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D08, full
            insert sequence
          Length = 1603

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                        
Query: 124  tatatctcgcaccaatattaacacccac 151
            ||||||||||||||||||||||||||||
Sbjct: 1490 tatatctcgcaccaatattaacacccac 1463
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>gb|AY106707.1| Zea mays PCO115444 mRNA sequence
          Length = 1423

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 53/62 (85%), Gaps = 1/62 (1%)
 Strand = Plus / Minus

                                                                        
Query: 88   tggaaccaaaggattatacagtcaactataagggac-tatatctcgcaccaatattaaca 146
            |||||||||| |||| ||||  ||||||||| |||  |||||| | ||||||||||||||
Sbjct: 1288 tggaaccaaatgattgtacaaccaactataatggatatatatcccacaccaatattaaca 1229

              
Query: 147  cc 148
            ||
Sbjct: 1228 cc 1227
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>emb|AL157397.14| Human DNA sequence from clone RP11-438P12 on chromosome 10, complete
             sequence
          Length = 142281

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 353   aacaacaacagagatgccaccttct 377
             |||||||| ||||||||||||||||
Sbjct: 37919 aacaacaagagagatgccaccttct 37895
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>emb|BX465210.7| Zebrafish DNA sequence from clone CH211-266A5 in linkage group 4,
              complete sequence
          Length = 171708

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 374    ttctttcagggcagcagggac 394
              |||||||||||||||||||||
Sbjct: 141931 ttctttcagggcagcagggac 141951
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>gb|AC005077.5| Homo sapiens BAC clone CTA-228D17 from 7, complete sequence
          Length = 240379

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   acccaccccaggcctcaagc 165
             ||||||||||||||||||||
Sbjct: 32368 acccaccccaggcctcaagc 32349
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>gb|AC125114.3| Mus musculus BAC clone RP24-254M13 from chromosome 18, complete sequence
          Length = 158836

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    cctgaagaactgcagccaaa 184
              ||||||||||||||||||||
Sbjct: 113101 cctgaagaactgcagccaaa 113082
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>gb|AC126026.4| Mus musculus BAC clone RP24-486A17 from chromosome 18, complete
             sequence
          Length = 138242

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   cctgaagaactgcagccaaa 184
             ||||||||||||||||||||
Sbjct: 48933 cctgaagaactgcagccaaa 48914
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>gb|AC105407.5| Mus musculus BAC clone RP24-196J17 from 13, complete sequence
          Length = 175889

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   tacagtcaactataagggac 123
             ||||||||||||||||||||
Sbjct: 38723 tacagtcaactataagggac 38742
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>emb|AL390059.10| Human DNA sequence from clone RP11-399E10 on chromosome 4, complete
              sequence
          Length = 200379

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    gcagcaccttcttttgtagc 325
              ||||||||||||||||||||
Sbjct: 184081 gcagcaccttcttttgtagc 184062
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>emb|AL442643.2| Human DNA sequence from clone RP11-564H19 on chromosome 13, complete
              sequence
          Length = 167477

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 314    ttcttttgtagcaactggga 333
              ||||||||||||||||||||
Sbjct: 109075 ttcttttgtagcaactggga 109056
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>gb|AC182768.3| Pan troglodytes BAC clone CH251-178I17 from chromosome 7, complete
              sequence
          Length = 186886

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    acccaccccaggcctcaagc 165
              ||||||||||||||||||||
Sbjct: 121967 acccaccccaggcctcaagc 121986
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>gb|AC114941.2| Homo sapiens chromosome 5 clone CTD-2287M17, complete sequence
          Length = 159281

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 158    cctcaagcctgaagaactgcagcc 181
              ||||||||||||||| ||||||||
Sbjct: 141712 cctcaagcctgaagacctgcagcc 141689



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 158    cctcaagcctgaagaactgcagcc 181
              ||||||||||||||| ||||||||
Sbjct: 139033 cctcaagcctgaagacctgcagcc 139010
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>gb|AC145375.5| Pan troglodytes BAC clone RP43-57M5 from chromosome 7, complete
           sequence
          Length = 217260

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 146 acccaccccaggcctcaagc 165
           ||||||||||||||||||||
Sbjct: 874 acccaccccaggcctcaagc 855
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>ref|XM_226546.3| PREDICTED: Rattus norvegicus similar to Galactosamine
           (N-acetyl)-6-sulfate sulfatase (LOC292073), mRNA
          Length = 2587

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 tgccaccttctttgggagca 440
           ||||||||||||||||||||
Sbjct: 984 tgccaccttctttgggagca 965
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>gb|AF211184.1|AF211184 Hylobates sp. growth hormone receptor (GHR) gene, partial cds
          Length = 2448

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 158 cctcaagcctgaagaactgcagcc 181
           ||||||||||||||| ||||||||
Sbjct: 884 cctcaagcctgaagacctgcagcc 861
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>gb|AF210633.1|AF210633 Homo sapiens growth hormone receptor (GHR) gene, GHR-d3 allele,
            partial sequence
          Length = 1474

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 158  cctcaagcctgaagaactgcagcc 181
            ||||||||||||||| ||||||||
Sbjct: 1021 cctcaagcctgaagacctgcagcc 998
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>gb|AF211185.1|AF211185 Pongo pygmaeus growth hormone receptor (GHR) gene, partial cds
          Length = 2480

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 158 cctcaagcctgaagaactgcagcc 181
           ||||||||||||||| ||||||||
Sbjct: 919 cctcaagcctgaagacctgcagcc 896
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>gb|AF209082.1|AF209082 Pan troglodytes growth hormone receptor (GHR) gene, partial cds
          Length = 3876

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 158  cctcaagcctgaagaactgcagcc 181
            ||||||||||||||| ||||||||
Sbjct: 3500 cctcaagcctgaagacctgcagcc 3477



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 158 cctcaagcctgaagaactgcagcc 181
           ||||||||||||||| ||||||||
Sbjct: 823 cctcaagcctgaagacctgcagcc 800
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>gb|AF155912.1|AF155912 Homo sapiens growth hormone receptor (GHR) gene, exon 3 and partial
            cds
          Length = 6789

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 158  cctcaagcctgaagaactgcagcc 181
            ||||||||||||||| ||||||||
Sbjct: 6159 cctcaagcctgaagacctgcagcc 6136



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 158  cctcaagcctgaagaactgcagcc 181
            ||||||||||||||| ||||||||
Sbjct: 3443 cctcaagcctgaagacctgcagcc 3420
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>dbj|BS000029.1| Pan troglodytes chromosome 22 clone:RP43-172K02, map 22, complete
              sequences
          Length = 173573

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 350    agcaacaacaacagagatgc 369
              ||||||||||||||||||||
Sbjct: 140844 agcaacaacaacagagatgc 140863
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>emb|AL163213.2|HS21C013 Homo sapiens chromosome 21 segment HS21C013
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 350   agcaacaacaacagagatgc 369
             ||||||||||||||||||||
Sbjct: 50217 agcaacaacaacagagatgc 50236
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>gb|AC005516.1|AC005516 Homo sapiens Chromosome 4p16.3 BAC clone 399e10 containing Huntington's
              Disease gene; exons 1-67, complete sequence
          Length = 200348

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    gcagcaccttcttttgtagc 325
              ||||||||||||||||||||
Sbjct: 184050 gcagcaccttcttttgtagc 184031
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>tpe|BN000741.1| TPA: TPA_inf: Rattus norvegicus mRNA for galactosamine
           (N-acetyl)-6-sulfate sulfatase (galns gene)
          Length = 1575

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 tgccaccttctttgggagca 440
           ||||||||||||||||||||
Sbjct: 910 tgccaccttctttgggagca 891
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>emb|Z68756.1|HSL191F1 Human DNA sequence from clone LA04NC01-191F1 on chromosome 4,
            complete sequence
          Length = 40592

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 306  gcagcaccttcttttgtagc 325
            ||||||||||||||||||||
Sbjct: 1217 gcagcaccttcttttgtagc 1198
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>gb|AC092145.2| Homo sapiens chromosome 16 clone RP11-61F12, complete sequence
          Length = 113176

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   caatattaacacccacccca 155
             ||||||||||||||||||||
Sbjct: 86421 caatattaacacccacccca 86402
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>dbj|AP000473.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B291N6,
              LL56-APP region, complete sequence
          Length = 155448

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 350    agcaacaacaacagagatgc 369
              ||||||||||||||||||||
Sbjct: 135722 agcaacaacaacagagatgc 135741


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,069,300
Number of Sequences: 3902068
Number of extensions: 4069300
Number of successful extensions: 74351
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 74233
Number of HSP's gapped (non-prelim): 110
length of query: 442
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 420
effective length of database: 17,147,199,772
effective search space: 7201823904240
effective search space used: 7201823904240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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