| Clone Name | rbags26m04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC129019.4| Mus musculus BAC clone RP24-541L1 from chromosome 13, complete sequence Length = 190792 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 241 tattagcaatggtcccaagctg 262 |||||||||||||||||||||| Sbjct: 94049 tattagcaatggtcccaagctg 94028
>gb|AC160395.2| Mus musculus BAC clone RP23-36C19 from chromosome 12, complete sequence Length = 207840 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 cagcagtacaagagcagcaca 151 ||||||||||||||||||||| Sbjct: 13963 cagcagtacaagagcagcaca 13983
>gb|AC159282.2| Mus musculus BAC clone RP23-329M17 from chromosome 12, complete sequence Length = 210571 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 cagcagtacaagagcagcaca 151 ||||||||||||||||||||| Sbjct: 171047 cagcagtacaagagcagcaca 171067
>gb|CP000121.1| Anabaena variabilis ATCC 29413 plasmid C, complete sequence Length = 300758 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 gttcttcatccaagctacaa 121 |||||||||||||||||||| Sbjct: 177512 gttcttcatccaagctacaa 177531
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 134 cagtacaagagcagcacatgccatcagc 161 ||||||| ||||||||||||||| |||| Sbjct: 2167254 cagtacatgagcagcacatgccaccagc 2167281
>dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_D01 Length = 97862 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 134 cagtacaagagcagcacatgccatcagc 161 ||||||| ||||||||||||||| |||| Sbjct: 45516 cagtacatgagcagcacatgccaccagc 45543
>dbj|AK070704.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056N10, full insert sequence Length = 2476 Score = 40.1 bits (20), Expect = 4.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 134 cagtacaagagcagcacatgccatcagc 161 ||||||| ||||||||||||||| |||| Sbjct: 2430 cagtacatgagcagcacatgccaccagc 2403
>dbj|AP001876.5| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2544I7, complete sequence Length = 197086 Score = 40.1 bits (20), Expect = 4.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 caagacattattagcaatgg 252 |||||||||||||||||||| Sbjct: 16332 caagacattattagcaatgg 16313 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,223,581 Number of Sequences: 3902068 Number of extensions: 2223581 Number of successful extensions: 39101 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 39066 Number of HSP's gapped (non-prelim): 35 length of query: 329 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 307 effective length of database: 17,147,199,772 effective search space: 5264190330004 effective search space used: 5264190330004 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)