ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags27a23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IBP3_MOUSE (P47878) Insulin-like growth factor-binding protein 3... 30 1.5
2IBP3_BOVIN (P20959) Insulin-like growth factor-binding protein 3... 30 1.5
3IBP3_PIG (P16611) Insulin-like growth factor-binding protein 3 p... 30 2.0
4BMP7_MOUSE (P23359) Bone morphogenetic protein 7 precursor (BMP-... 29 2.6
5BMP7_HUMAN (P18075) Bone morphogenetic protein 7 precursor (BMP-... 29 2.6
6IBP3_RAT (P15473) Insulin-like growth factor-binding protein 3 p... 29 3.4

>IBP3_MOUSE (P47878) Insulin-like growth factor-binding protein 3 precursor|
           (IGFBP-3) (IBP-3) (IGF-binding protein 3)
          Length = 291

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = -1

Query: 238 RTTQCITR*SSQCGPKGGSPK*EERMNSYNCACCYFHSCALR 113
           R   C  R  SQC P   +P   E +    C CC   +CALR
Sbjct: 38  RCEPCDARAVSQCAPPPTAPACTELVREPGCGCCL--TCALR 77



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>IBP3_BOVIN (P20959) Insulin-like growth factor-binding protein 3 precursor|
           (IGFBP-3) (IBP-3) (IGF-binding protein 3)
          Length = 291

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = -1

Query: 238 RTTQCITR*SSQCGPKGGSPK*EERMNSYNCACCYFHSCALR 113
           R   C  R  +QC P   SP   E +    C CC   +CALR
Sbjct: 39  RCEPCDARAVAQCAPPPPSPPCAELVREPGCGCCL--TCALR 78



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>IBP3_PIG (P16611) Insulin-like growth factor-binding protein 3 precursor|
           (IGFBP-3) (IBP-3) (IGF-binding protein 3)
          Length = 293

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -1

Query: 238 RTTQCITR*SSQCGPKGGSPK*EERMNSYNCACCYFHSCALR 113
           R   C  R  +QC P   +P   E +    C CC   +CALR
Sbjct: 39  RCEPCDARALAQCAPPPAAPPCAELVREPGCGCCL--TCALR 78



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>BMP7_MOUSE (P23359) Bone morphogenetic protein 7 precursor (BMP-7) (Osteogenic|
           protein 1) (OP-1)
          Length = 430

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +2

Query: 128 VEITACTIVAIHSFFLFWAPAF--RSALATLSGNALCGSSIYHSR 256
           + + +    A HSF   WAP F  RSALA  S +    SS  H R
Sbjct: 1   MHVRSLRAAAPHSFVALWAPLFLLRSALADFSLDNEVHSSFIHRR 45



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>BMP7_HUMAN (P18075) Bone morphogenetic protein 7 precursor (BMP-7) (Osteogenic|
           protein 1) (OP-1) (Eptotermin alfa)
          Length = 431

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +2

Query: 128 VEITACTIVAIHSFFLFWAPAF--RSALATLSGNALCGSSIYHSR 256
           + + +    A HSF   WAP F  RSALA  S +    SS  H R
Sbjct: 1   MHVRSLRAAAPHSFVALWAPLFLLRSALADFSLDNEVHSSFIHRR 45



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>IBP3_RAT (P15473) Insulin-like growth factor-binding protein 3 precursor|
           (IGFBP-3) (IBP-3) (IGF-binding protein 3)
          Length = 292

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -1

Query: 238 RTTQCITR*SSQCGPKGGSPK*EERMNSYNCACCYFHSCALR 113
           R   C  R  +QC P   +P   E +    C CC   +CALR
Sbjct: 39  RCEPCDARALAQCAPPPTAPACTELVREPGCGCCL--TCALR 78


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,011,155
Number of Sequences: 219361
Number of extensions: 670310
Number of successful extensions: 1478
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1478
length of database: 80,573,946
effective HSP length: 77
effective length of database: 63,683,149
effective search space used: 1528395576
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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