ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags26l20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467311.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4578 Score = 133 bits (67), Expect = 7e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 437 gagccgctcttcttgttgaagggggagtccctgatccttcgcaccttcttctcaggagaa 496 |||||||||||||||| |||||| ||| |||| ||| | |||||||||||||||||||| Sbjct: 4343 gagccgctcttcttgtggaagggagaggccctcatcttgcgcaccttcttctcaggagat 4284 Query: 497 ggagcactgaggttgctgtcatcagtaggcttgaatatttcttccatcactttctgcctc 556 ||||| ||| | ||||||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 4283 ggagcgctggtgctgctgtcctctgtaggcttgaacatttcttccatcactttctgcctc 4224 Query: 557 atg 559 ||| Sbjct: 4223 atg 4221
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 133 bits (67), Expect = 7e-28 Identities = 109/123 (88%) Strand = Plus / Plus Query: 437 gagccgctcttcttgttgaagggggagtccctgatccttcgcaccttcttctcaggagaa 496 |||||||||||||||| |||||| ||| |||| ||| | |||||||||||||||||||| Sbjct: 28796356 gagccgctcttcttgtggaagggagaggccctcatcttgcgcaccttcttctcaggagat 28796415 Query: 497 ggagcactgaggttgctgtcatcagtaggcttgaatatttcttccatcactttctgcctc 556 ||||| ||| | ||||||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 28796416 ggagcgctggtgctgctgtcctctgtaggcttgaacatttcttccatcactttctgcctc 28796475 Query: 557 atg 559 ||| Sbjct: 28796476 atg 28796478 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 115 acgacgcacaagagatgcacctgagcaa 142 ||||||||||||||||||| || ||||| Sbjct: 28795974 acgacgcacaagagatgcatctcagcaa 28796001
>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0459B01 Length = 163087 Score = 133 bits (67), Expect = 7e-28 Identities = 109/123 (88%) Strand = Plus / Plus Query: 437 gagccgctcttcttgttgaagggggagtccctgatccttcgcaccttcttctcaggagaa 496 |||||||||||||||| |||||| ||| |||| ||| | |||||||||||||||||||| Sbjct: 112929 gagccgctcttcttgtggaagggagaggccctcatcttgcgcaccttcttctcaggagat 112988 Query: 497 ggagcactgaggttgctgtcatcagtaggcttgaatatttcttccatcactttctgcctc 556 ||||| ||| | ||||||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 112989 ggagcgctggtgctgctgtcctctgtaggcttgaacatttcttccatcactttctgcctc 113048 Query: 557 atg 559 ||| Sbjct: 113049 atg 113051 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 115 acgacgcacaagagatgcacctgagcaa 142 ||||||||||||||||||| || ||||| Sbjct: 112547 acgacgcacaagagatgcatctcagcaa 112574
>dbj|AK063335.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-A06, full insert sequence Length = 2524 Score = 133 bits (67), Expect = 7e-28 Identities = 109/123 (88%) Strand = Plus / Minus Query: 437 gagccgctcttcttgttgaagggggagtccctgatccttcgcaccttcttctcaggagaa 496 |||||||||||||||| |||||| ||| |||| ||| | |||||||||||||||||||| Sbjct: 2087 gagccgctcttcttgtggaagggagaggccctcatcttgcgcaccttcttctcaggagat 2028 Query: 497 ggagcactgaggttgctgtcatcagtaggcttgaatatttcttccatcactttctgcctc 556 ||||| ||| | ||||||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 2027 ggagcgctggtgctgctgtcctctgtaggcttgaacatttcttccatcactttctgcctc 1968 Query: 557 atg 559 ||| Sbjct: 1967 atg 1965 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 115 acgacgcacaagagatgcacctgagcaa 142 ||||||||||||||||||| || ||||| Sbjct: 2469 acgacgcacaagagatgcatctcagcaa 2442
>gb|AY109977.1| Zea mays CL3228_1 mRNA sequence Length = 990 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 437 gagccgctcttcttgttgaagggggagtccctgatccttcgcaccttcttctcaggagaa 496 ||||||||||||||||||||||| ||| ||| ||| | || |||||||||||||| ||| Sbjct: 357 gagccgctcttcttgttgaagggagaggacctcatcttccggaccttcttctcaggggaa 416 Query: 497 g 497 | Sbjct: 417 g 417 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 354 caactggctcagcagagctgccggaggg 381 |||||||||| ||||||||||| ||||| Sbjct: 268 caactggctctgcagagctgccagaggg 295
>gb|AY107660.1| Zea mays PCO118934 mRNA sequence Length = 1140 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Minus Query: 437 gagccgctcttcttgttgaagggggagtccctgatccttcgcaccttcttctcagg 492 ||||| ||||||||||||||||| ||| ||| ||| | || |||||||||||||| Sbjct: 707 gagccactcttcttgttgaagggagagggcctcatcttccggaccttcttctcagg 652
>ref|NM_128450.1| Arabidopsis thaliana CXIP4 (CAX INTERACTING PROTEIN 4); nucleic acid binding AT2G28910 (CXIP4) mRNA, complete cds Length = 1345 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 catcttcatcctcagactcatca 289 ||||||||||||||||||||||| Sbjct: 885 catcttcatcctcagactcatca 863
>gb|AY142061.1| Arabidopsis thaliana At2g28910/F8N16.20 mRNA, complete cds Length = 999 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 catcttcatcctcagactcatca 289 ||||||||||||||||||||||| Sbjct: 751 catcttcatcctcagactcatca 729
>gb|AC005727.3| Arabidopsis thaliana chromosome 2 clone F8N16 map mi54, complete sequence Length = 107097 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 267 catcttcatcctcagactcatca 289 ||||||||||||||||||||||| Sbjct: 87424 catcttcatcctcagactcatca 87446
>gb|AF428457.1|AF428457 Arabidopsis thaliana At2g28910/F8N16.20 mRNA, complete cds Length = 1310 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 catcttcatcctcagactcatca 289 ||||||||||||||||||||||| Sbjct: 884 catcttcatcctcagactcatca 862
>gb|AY163162.1| Arabidopsis thaliana CAX-interacting protein 4 mRNA, complete cds Length = 999 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 catcttcatcctcagactcatca 289 ||||||||||||||||||||||| Sbjct: 751 catcttcatcctcagactcatca 729
>gb|AY088773.1| Arabidopsis thaliana clone 948 mRNA, complete sequence Length = 1345 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 267 catcttcatcctcagactcatca 289 ||||||||||||||||||||||| Sbjct: 885 catcttcatcctcagactcatca 863
>gb|AC107851.17| Mus musculus chromosome 9, clone RP23-451B4, complete sequence Length = 190253 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 536 tcttccatcactttctgcctca 557 |||||||||||||||||||||| Sbjct: 53043 tcttccatcactttctgcctca 53064
>gb|AY445095.1| Homo sapiens nitric oxide synthase 1 (neuronal) (NOS1) gene, complete cds Length = 152210 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 483 tcttctcaggagaaggagcactgagg 508 ||||||||||||| |||||||||||| Sbjct: 36503 tcttctcaggagagggagcactgagg 36478
>emb|AL359986.15| Human DNA sequence from clone RP11-106M14 on chromosome 10 Contains the PPP1R3C gene for protein phosphatase 1 regulatory (inhibitor) subunit 3C, a glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene and a CpG island, complete sequence Length = 173119 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 547 tttctgcctcatgcctttgctc 568 |||||||||||||||||||||| Sbjct: 28075 tttctgcctcatgcctttgctc 28096
>emb|AL137018.9| Human DNA sequence from clone RP11-133M9 on chromosome 9q13-21.33 Contains the 3' end of the RORB gene for RAR-related orphan receptor B protein (RZRB, ROR-BETA), complete sequence Length = 157168 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 227 tcatcttcagagaagtcatcat 248 |||||||||||||||||||||| Sbjct: 14491 tcatcttcagagaagtcatcat 14512
>gb|AC068799.14| Homo sapiens 12 BAC RP11-331O1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170249 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 483 tcttctcaggagaaggagcactgagg 508 ||||||||||||| |||||||||||| Sbjct: 55890 tcttctcaggagagggagcactgagg 55865
>gb|AY091599.1| Infectious salmon anemia virus isolate RPC/NB 980280-2 nucleoprotein mRNA, complete cds Length = 1851 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ctcatcatcttcactcccgga 303 ||||||||||||||||||||| Sbjct: 827 ctcatcatcttcactcccgga 807
>ref|XM_751233.1| Ustilago maydis 521 hypothetical protein (UM00179.1) partial mRNA Length = 1434 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 ttcatcctcagactcatcatc 291 ||||||||||||||||||||| Sbjct: 270 ttcatcctcagactcatcatc 250
>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome Length = 1315030 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 267 catcttcatcctcagactcatcatcttca 295 |||||||||||||| || ||||||||||| Sbjct: 877453 catcttcatcctcatacacatcatcttca 877481
>dbj|AK125793.1| Homo sapiens cDNA FLJ43805 fis, clone TESTI4001060 Length = 3801 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 504 tgaggttgctgtcatcagtaggcttgaat 532 |||||||||||||||| ||||||||||| Sbjct: 1630 tgaggttgctgtcatctataggcttgaat 1602
>gb|AF404345.1|AF404345 Infectious salmon anemia virus segment 3 putative nucleocapsid protein (NP) gene, complete cds Length = 2046 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ctcatcatcttcactcccgga 303 ||||||||||||||||||||| Sbjct: 875 ctcatcatcttcactcccgga 855
>gb|AF306549.1|AF306549 Infectious salmon anemia virus putative nucleoprotein mRNA, complete cds Length = 2042 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ctcatcatcttcactcccgga 303 ||||||||||||||||||||| Sbjct: 886 ctcatcatcttcactcccgga 866
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 482 ttcttctcaggagaaggagca 502 ||||||||||||||||||||| Sbjct: 4596298 ttcttctcaggagaaggagca 4596278
>emb|AL596139.1|CNS07EGR BAC A of library A from Tetraodon nigroviridis, T-cell receptor alpha delta locus (germline) Length = 74861 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 501 cactgaggttgctgtcatcag 521 ||||||||||||||||||||| Sbjct: 73069 cactgaggttgctgtcatcag 73049
>emb|AL357752.19| Human DNA sequence from clone RP13-26D14 on chromosome Xq13.2-21.1 Contains the 5' end of the KIF4A gene for kinesin family member 4A, gene FLJ21093, a novel gene, the ARR3 gene for arrestin 3, retinal (x-arrestin), the P2RY4 gene for pyrimidinergic receptor P2Y, G-protein coupled, 4, the gene for a novel protein similar to diacylglycerol O-acyltransferase 2 like 1 (DGAT2L1), a novel pseudogene, the 3' end of the gene for a novel protein similar to diacylglycerol O-acyltransferase homolog 2 (mouse) (DGAT2) and two CpG islands, complete sequence Length = 178868 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 cctctcccttgttgtccttct 348 ||||||||||||||||||||| Sbjct: 103227 cctctcccttgttgtccttct 103247
>emb|AJ005462.1|HSAJ5462 Homo sapiens X-arrestin gene, exons 5 and 6 Length = 551 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 cctctcccttgttgtccttct 348 ||||||||||||||||||||| Sbjct: 350 cctctcccttgttgtccttct 330
>gb|AC013489.17| Homo sapiens chromosome 15, clone RP11-97O12, complete sequence Length = 175836 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 504 tgaggttgctgtcatcagtaggcttgaat 532 |||||||||||||||| ||||||||||| Sbjct: 129573 tgaggttgctgtcatctataggcttgaat 129545
>gb|BT018408.1| Zea mays clone EL01N0326B06.d mRNA sequence Length = 1188 Score = 40.1 bits (20), Expect = 7.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 437 gagccgctcttcttgttgaagggggagtccctgatccttcgcaccttcttctcagg 492 ||||| ||||||||||||||||| || ||| ||| | || |||||||||||||| Sbjct: 745 gagccactcttcttgttgaagggaaagggcctcatcttccggaccttcttctcagg 690
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 accgccgccttcctctccct 336 |||||||||||||||||||| Sbjct: 1805485 accgccgccttcctctccct 1805466
>gb|AY453853.1| Bacteriophage phi1026b, complete genome Length = 54865 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 accgccgccttcctctccct 336 |||||||||||||||||||| Sbjct: 8493 accgccgccttcctctccct 8474
>gb|AY207461.1|AY207460S2 Mus musculus aldehyde reductase (Akr1a4) gene, exon 2 Length = 2173 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tcatcttcagagaagtcatc 246 |||||||||||||||||||| Sbjct: 778 tcatcttcagagaagtcatc 797
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 541 catcactttctgcctcatgccttt 564 ||||||||||||| |||||||||| Sbjct: 30858 catcactttctgcgtcatgccttt 30881
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 541 catcactttctgcctcatgccttt 564 ||||||||||||| |||||||||| Sbjct: 30123 catcactttctgcgtcatgccttt 30146
>emb|Z99105.2|BSUB0002 Bacillus subtilis complete genome (section 2 of 21): from 213031 to 415798 Length = 202768 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 actttctgcctcatgccttt 564 |||||||||||||||||||| Sbjct: 83387 actttctgcctcatgccttt 83368
>emb|X72957.1|XLNUCLEO X.laevis mRNA for nucleolin Length = 2580 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 267 catcttcatcctcagactcatcatcttc 294 |||||||||||||| |||||||||||| Sbjct: 451 catcttcatcctcatcctcatcatcttc 424
>emb|CR749165.5| Zebrafish DNA sequence from clone DKEY-9F14 in linkage group 5, complete sequence Length = 61537 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 ctctcccttgttgtccttct 348 |||||||||||||||||||| Sbjct: 35493 ctctcccttgttgtccttct 35512
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 caaaccgattagctcacaga 89 |||||||||||||||||||| Sbjct: 491498 caaaccgattagctcacaga 491517
>gb|AC009869.7| Homo sapiens chromosome 11, clone RP11-222N13, complete sequence Length = 192696 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 tctctagacactagccactg 194 |||||||||||||||||||| Sbjct: 30552 tctctagacactagccactg 30533
>dbj|AK041753.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630035A22 product:unclassifiable, full insert sequence Length = 2301 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 tgagccaaggagtctagtca 229 |||||||||||||||||||| Sbjct: 313 tgagccaaggagtctagtca 332
>emb|AL929240.18| Mouse DNA sequence from clone RP23-245A10 on chromosome 2, complete sequence Length = 180092 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 tgagccaaggagtctagtca 229 |||||||||||||||||||| Sbjct: 43107 tgagccaaggagtctagtca 43088
>gb|AF235093.1|AF235093 Homo sapiens chromosome 21 map 21q21 clone PAC P704-39J11, complete sequence Length = 161121 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ctcaggagaaggagcactga 506 |||||||||||||||||||| Sbjct: 145343 ctcaggagaaggagcactga 145324
>dbj|BS000022.1| Pan troglodytes chromosome 22 clone:PTB-131J13, map 22, complete sequences Length = 214189 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ctcaggagaaggagcactga 506 |||||||||||||||||||| Sbjct: 179907 ctcaggagaaggagcactga 179888
>gb|AC155244.2| Mus musculus BAC clone RP24-318B2 from 13, complete sequence Length = 198847 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 atgcctttgctctgagctgg 576 |||||||||||||||||||| Sbjct: 137522 atgcctttgctctgagctgg 137503
>gb|AC110041.13| Mus musculus chromosome 8, clone RP23-276O15, complete sequence Length = 190535 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 546 ctttctgcctcatgcctttgctct 569 |||||| ||||||||||||||||| Sbjct: 141899 ctttctccctcatgcctttgctct 141922
>dbj|AP001666.1| Homo sapiens genomic DNA, chromosome 21q, section 10/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ctcaggagaaggagcactga 506 |||||||||||||||||||| Sbjct: 10099 ctcaggagaaggagcactga 10080
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 accgccgccttcctctccct 336 |||||||||||||||||||| Sbjct: 1225921 accgccgccttcctctccct 1225902
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 532 tatttcttccatcactttctgcct 555 ||||||||||| |||||||||||| Sbjct: 1380501 tatttcttccagcactttctgcct 1380478
>gb|L37104.1|TMOILES Thermotoga maritima (clones pILTM0.95 and pILTM3KMSKS) transfer RNA-Ile synthetase (ileS) gene, partial cds Length = 1515 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 532 tatttcttccatcactttctgcct 555 ||||||||||| |||||||||||| Sbjct: 993 tatttcttccagcactttctgcct 970
>gb|AC140449.3| Mus musculus BAC clone RP24-116C1 from 9, complete sequence Length = 222299 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 ctttctgcctcatgcctttg 565 |||||||||||||||||||| Sbjct: 172643 ctttctgcctcatgcctttg 172662
>gb|AC163743.6| Mus musculus BAC clone RP23-415J4 from chromosome 13, complete sequence Length = 198305 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 atgcctttgctctgagctgg 576 |||||||||||||||||||| Sbjct: 17602 atgcctttgctctgagctgg 17583
>gb|U30873.1|BSU30873 Bacillus subtilis NatA (natA) and NatB (natB) genes, complete cds Length = 5094 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 actttctgcctcatgccttt 564 |||||||||||||||||||| Sbjct: 2688 actttctgcctcatgccttt 2669
>dbj|AP005060.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-637N19, complete sequence Length = 107942 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 ttgagccaaggagtctagtc 228 |||||||||||||||||||| Sbjct: 27605 ttgagccaaggagtctagtc 27624
>dbj|AP006357.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT36C13, TM0100a, complete sequence Length = 79575 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 267 catcttcatcctcagactcatcatcttc 294 |||||||||||||| |||||||||||| Sbjct: 53158 catcttcatcctcatcctcatcatcttc 53131
>emb|AL831786.7| Mouse DNA sequence from clone RP23-177C18 on chromosome 4, complete sequence Length = 80871 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 tcatcttcagagaagtcatc 246 |||||||||||||||||||| Sbjct: 20396 tcatcttcagagaagtcatc 20377
>emb|AL109762.3|HSM24152 Homo sapiens chromosome 21 sequence from PAC RPCI-1 152M24 map 21q21 region D21S189-LA297, complete sequence Length = 116137 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ctcaggagaaggagcactga 506 |||||||||||||||||||| Sbjct: 106862 ctcaggagaaggagcactga 106843
>emb|AL732460.7| Mouse DNA sequence from clone RP23-113I19 on chromosome X, complete sequence Length = 198572 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 tatttcttccatcactttct 551 |||||||||||||||||||| Sbjct: 184894 tatttcttccatcactttct 184875
>dbj|AP001344.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B746N6, LL56-APP region, complete sequence Length = 88824 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ctcaggagaaggagcactga 506 |||||||||||||||||||| Sbjct: 12050 ctcaggagaaggagcactga 12031
>dbj|AB000617.1| Bacillus subtilis genomic DNA, 22 to 25 degree region, complete cds Length = 35000 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 actttctgcctcatgccttt 564 |||||||||||||||||||| Sbjct: 9958 actttctgcctcatgccttt 9939 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,442,224 Number of Sequences: 3902068 Number of extensions: 5442224 Number of successful extensions: 117368 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 117097 Number of HSP's gapped (non-prelim): 271 length of query: 577 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 554 effective length of database: 17,143,297,704 effective search space: 9497386928016 effective search space used: 9497386928016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
